Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
19:35:14 (923723): wrapper (7.7.26015): starting
19:35:14 (923723): wrapper: running run_atlas (--nthreads 12)
[2026-03-09 19:35:14] Arguments: --nthreads 12
[2026-03-09 19:35:14] Threads: 12
[2026-03-09 19:35:14] Checking for CVMFS
[2026-03-09 19:35:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 19:35:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 19:35:15] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 19:35:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 19:35:15] 2.13.3.0 909929 30 46004 157086 1 50 3505738 4096000 0 130560 0 39873 99.958 4223 1968 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-09 19:35:15] CVMFS is ok
[2026-03-09 19:35:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 19:35:15] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-09 19:35:15] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-09 19:35:15] Further information can be found at the LHC@home message board.
[2026-03-09 19:35:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 19:35:15] Checking for apptainer binary...
[2026-03-09 19:35:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 19:35:15] Running /usr/bin/apptainer --version
[2026-03-09 19:35:15] apptainer version 1.4.5
[2026-03-09 19:35:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 19:35:15] Ryzen-9-7950X3D-Zen4-Ubu24
[2026-03-09 19:35:15] apptainer works
[2026-03-09 19:35:15] Set ATHENA_PROC_NUMBER=12
[2026-03-09 19:35:15] Set ATHENA_CORE_NUMBER=12
[2026-03-09 19:35:15] Starting ATLAS job with PandaID=7047405199
[2026-03-09 19:35:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 20:10:40]  *** The last 200 lines of the pilot log: ***
[2026-03-09 20:10:40]  replicas=None
[2026-03-09 20:10:40]  scope=mc23_13p6TeV
[2026-03-09 20:10:40]  status=None
[2026-03-09 20:10:40]  status_code=0
[2026-03-09 20:10:40]  storage_token=
[2026-03-09 20:10:40]  surl=/var/lib/boinc-client/slots/3/PanDA_Pilot-7047405199/log.48966988._024265.job.log.tgz.1
[2026-03-09 20:10:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fa/70/log.48966988._024265.job.log.tgz.1
[2026-03-09 20:10:40]  workdir=None
[2026-03-09 20:10:40] ]
[2026-03-09 20:10:40] 2026-03-09 19:09:42,791 | INFO     | transferring file log.48966988._024265.job.log.tgz.1 from /var/lib/boinc-client/slots/3/PanDA_Pilot-7047405199/log.48966988._024265.job.log.tgz.1 to /var/lib/boinc
[2026-03-09 20:10:40] 2026-03-09 19:09:42,791 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/3/PanDA_Pilot-7047405199/log.48966988._024265.job.log.tgz.1 /var/lib/boinc-client/slots/3/log.489669
[2026-03-09 20:10:40] 2026-03-09 19:09:42,807 | INFO     | adding to output.list: log.48966988._024265.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fa/70/log.48966988._024265.job.log.tg
[2026-03-09 20:10:40] 2026-03-09 19:09:42,808 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-09 20:10:40] 2026-03-09 19:09:42,808 | INFO     | summary of transferred files:
[2026-03-09 20:10:40] 2026-03-09 19:09:42,808 | INFO     |  -- lfn=log.48966988._024265.job.log.tgz.1, status_code=0, status=transferred
[2026-03-09 20:10:40] 2026-03-09 19:09:42,808 | INFO     | stage-out finished correctly
[2026-03-09 20:10:40] 2026-03-09 19:09:42,851 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-09 20:10:40] 2026-03-09 19:09:43,674 | INFO     | time since job start (2051s) is within the limit (349056.0s)
[2026-03-09 20:10:40] 2026-03-09 19:09:43,675 | INFO     | 2057s have passed since pilot start - server update state is 'RUNNING'
[2026-03-09 20:10:40] 2026-03-09 19:09:45,109 | INFO     | job 7047405199 has state=finished
[2026-03-09 20:10:40] 2026-03-09 19:09:45,109 | INFO     | preparing for final server update for job 7047405199 in state='finished'
[2026-03-09 20:10:40] 2026-03-09 19:09:45,110 | INFO     | reading metadata from: /var/lib/boinc-client/slots/3/PanDA_Pilot-7047405199/jobReport.json
[2026-03-09 20:10:40] 2026-03-09 19:09:45,112 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/3/workernode_map.json
[2026-03-09 20:10:40] 2026-03-09 19:09:45,112 | INFO     | this job has now completed (state=finished)
[2026-03-09 20:10:40] 2026-03-09 19:09:45,112 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 20:10:40] 2026-03-09 19:09:45,112 | INFO     | log transfer has been attempted: DONE
[2026-03-09 20:10:40] 2026-03-09 19:09:45,112 | INFO     | job 7047405199 has finished - writing final server update
[2026-03-09 20:10:40] 2026-03-09 19:09:45,112 | INFO     | total number of processed events: 400 (read)
[2026-03-09 20:10:40] 2026-03-09 19:09:45,115 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-7047405199/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 20:10:40] 2026-03-09 19:09:45,116 | INFO     | extracted standard info from prmon json
[2026-03-09 20:10:40] 2026-03-09 19:09:45,116 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 20:10:40] 2026-03-09 19:09:45,116 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 20:10:40] 2026-03-09 19:09:45,116 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 20:10:40] 2026-03-09 19:09:45,116 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 20:10:40] 2026-03-09 19:09:45,116 | INFO     | fitting pss+swap vs Time
[2026-03-09 20:10:40] 2026-03-09 19:09:45,117 | INFO     | sum of square deviations: 6094998.0
[2026-03-09 20:10:40] 2026-03-09 19:09:45,117 | INFO     | sum of deviations: -778759611.0
[2026-03-09 20:10:40] 2026-03-09 19:09:45,117 | INFO     | mean x: 1773082449.0
[2026-03-09 20:10:40] 2026-03-09 19:09:45,117 | INFO     | mean y: 3075771.8518518517
[2026-03-09 20:10:40] 2026-03-09 19:09:45,117 | INFO     | intersect: 226550319635.45398
[2026-03-09 20:10:40] 2026-03-09 19:09:45,117 | INFO     | chi2: 0.0392571289083406
[2026-03-09 20:10:40] 2026-03-09 19:09:45,117 | INFO     | current memory leak: -127.77 B/s (using 27 data points, chi2=0.04)
[2026-03-09 20:10:40] 2026-03-09 19:09:45,117 | INFO     | could have reported an average CPU frequency of 4120 MHz (5 samples)
[2026-03-09 20:10:40] 2026-03-09 19:09:45,117 | INFO     | ..............................
[2026-03-09 20:10:40] 2026-03-09 19:09:45,117 | INFO     | . Timing measurements:
[2026-03-09 20:10:40] 2026-03-09 19:09:45,117 | INFO     | . get job = 0 s
[2026-03-09 20:10:40] 2026-03-09 19:09:45,117 | INFO     | . initial setup = 6 s
[2026-03-09 20:10:40] 2026-03-09 19:09:45,117 | INFO     | . payload setup = 5 s
[2026-03-09 20:10:40] 2026-03-09 19:09:45,117 | INFO     | . stage-in = 0 s
[2026-03-09 20:10:40] 2026-03-09 19:09:45,117 | INFO     | . payload execution = 2030 s
[2026-03-09 20:10:40] 2026-03-09 19:09:45,117 | INFO     | . stage-out = 0 s
[2026-03-09 20:10:40] 2026-03-09 19:09:45,117 | INFO     | . log creation = 0 s
[2026-03-09 20:10:40] 2026-03-09 19:09:45,117 | INFO     | ..............................
[2026-03-09 20:10:40] 2026-03-09 19:09:45,603 | INFO     | 
[2026-03-09 20:10:40] 2026-03-09 19:09:45,603 | INFO     | job summary report
[2026-03-09 20:10:40] 2026-03-09 19:09:45,603 | INFO     | --------------------------------------------------
[2026-03-09 20:10:40] 2026-03-09 19:09:45,603 | INFO     | PanDA job id: 7047405199
[2026-03-09 20:10:40] 2026-03-09 19:09:45,603 | INFO     | task id: 48966988
[2026-03-09 20:10:40] 2026-03-09 19:09:45,603 | INFO     | errors: (none)
[2026-03-09 20:10:40] 2026-03-09 19:09:45,603 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 20:10:40] 2026-03-09 19:09:45,603 | INFO     | pilot state: finished 
[2026-03-09 20:10:40] 2026-03-09 19:09:45,603 | INFO     | transexitcode: 0
[2026-03-09 20:10:40] 2026-03-09 19:09:45,603 | INFO     | exeerrorcode: 0
[2026-03-09 20:10:40] 2026-03-09 19:09:45,603 | INFO     | exeerrordiag: 
[2026-03-09 20:10:40] 2026-03-09 19:09:45,603 | INFO     | exitcode: 0
[2026-03-09 20:10:40] 2026-03-09 19:09:45,603 | INFO     | exitmsg: OK
[2026-03-09 20:10:40] 2026-03-09 19:09:45,603 | INFO     | cpuconsumptiontime: 22325 s
[2026-03-09 20:10:40] 2026-03-09 19:09:45,603 | INFO     | nevents: 400
[2026-03-09 20:10:40] 2026-03-09 19:09:45,603 | INFO     | neventsw: 0
[2026-03-09 20:10:40] 2026-03-09 19:09:45,603 | INFO     | pid: 932479
[2026-03-09 20:10:40] 2026-03-09 19:09:45,603 | INFO     | pgrp: 932479
[2026-03-09 20:10:40] 2026-03-09 19:09:45,603 | INFO     | corecount: 12
[2026-03-09 20:10:40] 2026-03-09 19:09:45,603 | INFO     | event service: False
[2026-03-09 20:10:40] 2026-03-09 19:09:45,603 | INFO     | sizes: {0: 2279181, 1: 2280306, 11: 2280306, 2040: 2314400, 2042: 2314570}
[2026-03-09 20:10:40] 2026-03-09 19:09:45,604 | INFO     | --------------------------------------------------
[2026-03-09 20:10:40] 2026-03-09 19:09:45,604 | INFO     | 
[2026-03-09 20:10:40] 2026-03-09 19:09:45,604 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2026-03-09 20:10:40] 2026-03-09 19:09:45,644 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 20:10:40] 2026-03-09 19:09:45,645 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 20:10:40] 2026-03-09 19:09:45,645 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 20:10:40] 2026-03-09 19:09:45,645 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 20:10:40] 2026-03-09 19:09:45,645 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 20:10:40] 2026-03-09 19:09:45,645 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 20:10:40] 2026-03-09 19:09:45,645 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 20:10:40] 2026-03-09 19:09:45,645 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 20:10:40] 2026-03-09 19:09:45,645 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 20:10:40] 2026-03-09 19:09:45,645 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 20:10:40] 2026-03-09 19:09:45,645 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 20:10:40] 2026-03-09 19:09:45,645 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 20:10:40] 2026-03-09 19:09:45,645 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 20:10:40] 2026-03-09 19:09:45,645 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 20:10:40] 2026-03-09 19:09:45,645 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 20:10:40] 2026-03-09 19:09:45,645 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 20:10:40] 2026-03-09 19:09:45,645 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 20:10:40] 2026-03-09 19:09:45,645 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 20:10:40] 2026-03-09 19:09:45,645 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 20:10:40] 2026-03-09 19:09:45,645 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 20:10:40] 2026-03-09 19:09:45,645 | INFO     | job 7047405199 has completed (purged errors)
[2026-03-09 20:10:40] 2026-03-09 19:09:45,645 | INFO     | overall cleanup function is called
[2026-03-09 20:10:40] 2026-03-09 19:09:46,277 | WARNING  | process 932479 can no longer be monitored (due to stat problems) - aborting
[2026-03-09 20:10:40] 2026-03-09 19:09:46,310 | INFO     | using path: /var/lib/boinc-client/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 20:10:40] 2026-03-09 19:09:46,310 | INFO     | using path: /var/lib/boinc-client/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 20:10:40] 2026-03-09 19:09:46,311 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-09 20:10:40] 2026-03-09 19:09:46,311 | WARNING  | maxPSS not found in memory monitor output
[2026-03-09 20:10:40] 2026-03-09 19:09:46,311 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc-client/slots/3/PanDA_Pilot-7047405199/payload.stdout) since it has not been created yet
[2026-03-09 20:10:40] 2026-03-09 19:09:46,311 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2026-03-09 20:10:40] 2026-03-09 19:09:46,337 | INFO     | sufficient remaining disk space (1768430764032 B)
[2026-03-09 20:10:40] 2026-03-09 19:09:46,338 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-09 20:10:40] 2026-03-09 19:09:46,338 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/3/PanDA_Pilot-7047405199/HITS.48966988._024265.pool.root.1 since it does not exist
[2026-03-09 20:10:40] 2026-03-09 19:09:46,380 | INFO     | number of running child processes to parent process 932479: 1
[2026-03-09 20:10:40] 2026-03-09 19:09:46,380 | INFO     | maximum number of monitored processes: 6
[2026-03-09 20:10:40] 2026-03-09 19:09:46,380 | INFO     | aborting job monitoring since job object (job id=7047405199) has expired
[2026-03-09 20:10:40] 2026-03-09 19:09:46,652 | INFO     | --- collectZombieJob: --- 10, [932479]
[2026-03-09 20:10:40] 2026-03-09 19:09:46,652 | INFO     | zombie collector waiting for pid 932479
[2026-03-09 20:10:40] 2026-03-09 19:09:46,652 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 20:10:40] 2026-03-09 19:09:46,653 | INFO     | collected zombie processes
[2026-03-09 20:10:40] 2026-03-09 19:09:46,653 | INFO     | will attempt to kill all subprocesses of pid=932479
[2026-03-09 20:10:40] 2026-03-09 19:09:46,694 | INFO     | process IDs to be killed: [932479] (in reverse order)
[2026-03-09 20:10:40] 2026-03-09 19:09:46,737 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 20:10:40] 2026-03-09 19:09:46,737 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 20:10:40] 2026-03-09 19:09:46,738 | INFO     | did not find any defunct processes belonging to 932479
[2026-03-09 20:10:40] 2026-03-09 19:09:46,740 | INFO     | did not find any defunct processes belonging to 932479
[2026-03-09 20:10:40] 2026-03-09 19:09:46,740 | INFO     | ready for new job
[2026-03-09 20:10:40] 2026-03-09 19:09:46,740 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 20:10:40] 2026-03-09 19:09:46,740 | INFO     | **************************************
[2026-03-09 20:10:40] 2026-03-09 19:09:46,740 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 20:10:40] 2026-03-09 19:09:46,741 | INFO     | **************************************
[2026-03-09 20:10:40] 2026-03-09 19:09:46,741 | INFO     | 
[2026-03-09 20:10:40] 2026-03-09 19:09:46,741 | INFO     | architecture information:
[2026-03-09 20:10:40] 2026-03-09 19:09:46,742 | INFO     | executing command: cat /etc/os-release
[2026-03-09 20:10:40] 2026-03-09 19:09:46,765 | INFO     | cat /etc/os-release:
[2026-03-09 20:10:40] NAME="CentOS Linux"
[2026-03-09 20:10:40] VERSION="7 (Core)"
[2026-03-09 20:10:40] ID="centos"
[2026-03-09 20:10:40] ID_LIKE="rhel fedora"
[2026-03-09 20:10:40] VERSION_ID="7"
[2026-03-09 20:10:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 20:10:40] ANSI_COLOR="0;31"
[2026-03-09 20:10:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 20:10:40] HOME_URL="https://www.centos.org/"
[2026-03-09 20:10:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 20:10:40] 
[2026-03-09 20:10:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 20:10:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 20:10:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 20:10:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 20:10:40] 
[2026-03-09 20:10:40] 2026-03-09 19:09:46,765 | INFO     | **************************************
[2026-03-09 20:10:40] 2026-03-09 19:09:47,267 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2026-03-09 20:10:40] 2026-03-09 19:09:47,281 | INFO     | sufficient remaining disk space (1768430764032 B)
[2026-03-09 20:10:40] 2026-03-09 19:09:47,281 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 20:10:40] 2026-03-09 19:09:47,282 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 20:10:40] 2026-03-09 19:09:47,282 | INFO     | update_server=False
[2026-03-09 20:10:40] 2026-03-09 19:09:47,282 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 20:10:40] 2026-03-09 19:09:47,282 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 20:10:40] 2026-03-09 19:09:47,282 | INFO     | will abort loop
[2026-03-09 20:10:40] 2026-03-09 19:09:47,389 | INFO     | all job control threads have been joined
[2026-03-09 20:10:40] 2026-03-09 19:09:47,551 | INFO     | all payload control threads have been joined
[2026-03-09 20:10:40] 2026-03-09 19:09:48,287 | INFO     | [job] retrieve thread has finished
[2026-03-09 20:10:40] 2026-03-09 19:09:48,287 | INFO     | [job] job monitor thread has finished
[2026-03-09 20:10:40] 2026-03-09 19:09:48,310 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 20:10:40] 2026-03-09 19:09:48,360 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 20:10:40] 2026-03-09 19:09:48,362 | INFO     | all data control threads have been joined
[2026-03-09 20:10:40] 2026-03-09 19:09:48,395 | INFO     | [job] control thread has finished
[2026-03-09 20:10:40] 2026-03-09 19:09:48,400 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 20:10:40] 2026-03-09 19:09:48,555 | INFO     | [payload] control thread has finished
[2026-03-09 20:10:40] 2026-03-09 19:09:48,653 | INFO     | [data] copytool_in thread has finished
[2026-03-09 20:10:40] 2026-03-09 19:09:48,894 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 20:10:40] 2026-03-09 19:09:49,220 | INFO     | [payload] failed_post thread has finished
[2026-03-09 20:10:40] 2026-03-09 19:09:49,292 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 20:10:40] 2026-03-09 19:09:49,367 | INFO     | [data] control thread has finished
[2026-03-09 20:10:40] 2026-03-09 19:09:49,508 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 20:10:40] 2026-03-09 19:09:49,676 | INFO     | [job] validate thread has finished
[2026-03-09 20:10:40] 2026-03-09 19:09:49,748 | INFO     | [payload] validate_post thread has finished
[2026-03-09 20:10:40] 2026-03-09 19:09:50,170 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 20:10:40] 2026-03-09 19:09:50,366 | INFO     | [data] copytool_out thread has finished
[2026-03-09 20:10:40] 2026-03-09 19:09:51,174 | INFO     | [job] queue monitor thread has finished
[2026-03-09 20:10:40] 2026-03-09 19:09:52,900 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 20:10:40] 2026-03-09 19:10:16,773 | INFO     | PID=927912 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-09 20:10:40] 2026-03-09 19:10:16,773 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 20:10:40] 2026-03-09 19:10:16,773 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 20:10:40] 2026-03-09 19:10:16,773 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 20:10:40] 2026-03-09 19:10:35,039 | INFO     | [monitor] cgroup control has ended
[2026-03-09 20:10:40] 2026-03-09 19:10:35,308 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131739383588672)>', '<ExcThread(monitor, started 131739036927744)>']
[2026-03-09 20:10:40] 2026-03-09 19:10:35,860 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 20:10:40] 2026-03-09 19:10:35,860 | INFO     | [monitor] control thread has ended
[2026-03-09 20:10:40] 2026-03-09 19:10:40,333 | INFO     | all workflow threads have been joined
[2026-03-09 20:10:40] 2026-03-09 19:10:40,334 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 20:10:40] 2026-03-09 19:10:40,334 | INFO     | traces error code: 0
[2026-03-09 20:10:40] 2026-03-09 19:10:40,334 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 20:10:40] 2026-03-09 19:10:40,440 [wrapper] ==== pilot stdout END ====
[2026-03-09 20:10:40] 2026-03-09 19:10:40,443 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 20:10:40] 2026-03-09 19:10:40,445 [wrapper] pilotpid: 927912
[2026-03-09 20:10:40] 2026-03-09 19:10:40,446 [wrapper] Pilot exit status: 0
[2026-03-09 20:10:40] 2026-03-09 19:10:40,455 [wrapper] pandaids: 7047405199
[2026-03-09 20:10:40] 2026-03-09 19:10:40,487 [wrapper] cleanup supervisor_pilot  937487 927913
[2026-03-09 20:10:40] 2026-03-09 19:10:40,494 [wrapper] Test setup, not cleaning
[2026-03-09 20:10:40] 2026-03-09 19:10:40,499 [wrapper] apfmon messages muted
[2026-03-09 20:10:40] 2026-03-09 19:10:40,502 [wrapper] ==== wrapper stdout END ====
[2026-03-09 20:10:40] 2026-03-09 19:10:40,504 [wrapper] ==== wrapper stderr END ====
[2026-03-09 20:10:40]  *** Error codes and diagnostics ***
[2026-03-09 20:10:40]     "exeErrorCode": 0,
[2026-03-09 20:10:40]     "exeErrorDiag": "",
[2026-03-09 20:10:40]     "pilotErrorCode": 0,
[2026-03-09 20:10:40]     "pilotErrorDiag": "",
[2026-03-09 20:10:40]  *** Listing of results directory ***
[2026-03-09 20:10:40] total 409712
[2026-03-09 20:10:40] -rw-r--r-- 1 boinc boinc      5111 Mar  9 15:53 queuedata.json
[2026-03-09 20:10:40] -rw-r--r-- 1 boinc boinc    584627 Mar  9 15:53 pilot3.tar.gz
[2026-03-09 20:10:40] -rwx------ 1 boinc boinc     36322 Mar  9 15:53 runpilot2-wrapper.sh
[2026-03-09 20:10:40] -rw-r--r-- 1 boinc boinc       100 Mar  9 19:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 20:10:40] -rwxr-xr-x 1 boinc boinc      7986 Mar  9 19:35 run_atlas
[2026-03-09 20:10:40] -rw-r--r-- 1 boinc boinc       105 Mar  9 19:35 job.xml
[2026-03-09 20:10:40] -rw-r--r-- 2 boinc boinc 211537426 Mar  9 19:35 EVNT.48966985._000945.pool.root.1
[2026-03-09 20:10:40] -rw-r--r-- 1 boinc boinc      9553 Mar  9 19:35 init_data.xml
[2026-03-09 20:10:40] -rw-r--r-- 2 boinc boinc     15845 Mar  9 19:35 start_atlas.sh
[2026-03-09 20:10:40] drwxrwx--x 2 boinc boinc      4096 Mar  9 19:35 shared
[2026-03-09 20:10:40] -rw-r--r-- 2 boinc boinc    597969 Mar  9 19:35 input.tar.gz
[2026-03-09 20:10:40] -rw-r--r-- 1 boinc boinc         0 Mar  9 19:35 boinc_lockfile
[2026-03-09 20:10:40] -rw-r--r-- 1 boinc boinc      2592 Mar  9 19:35 pandaJob.out
[2026-03-09 20:10:40] -rw------- 1 boinc boinc   1002738 Mar  9 19:35 agis_schedconf.cvmfs.json
[2026-03-09 20:10:40] -rw------- 1 boinc boinc   1511578 Mar  9 19:35 agis_ddmendpoints.agis.ALL.json
[2026-03-09 20:10:40] -rw------- 1 boinc boinc       444 Mar  9 19:35 workernode_map.json
[2026-03-09 20:10:40] drwx------ 5 boinc boinc      4096 Mar  9 19:35 pilot3
[2026-03-09 20:10:40] -rw------- 1 boinc boinc 202714893 Mar  9 20:09 HITS.48966988._024265.pool.root.1
[2026-03-09 20:10:40] -rw-r--r-- 1 boinc boinc       529 Mar  9 20:09 boinc_task_state.xml
[2026-03-09 20:10:40] -rw------- 1 boinc boinc        95 Mar  9 20:09 pilot_heartbeat.json
[2026-03-09 20:10:40] -rw------- 1 boinc boinc      1036 Mar  9 20:09 memory_monitor_summary.json
[2026-03-09 20:10:40] -rw------- 1 boinc boinc    344082 Mar  9 20:09 log.48966988._024265.job.log.tgz.1
[2026-03-09 20:10:40] -rw------- 1 boinc boinc      6352 Mar  9 20:09 heartbeat.json
[2026-03-09 20:10:40] -rw-r--r-- 1 boinc boinc        27 Mar  9 20:10 wrapper_checkpoint.txt
[2026-03-09 20:10:40] -rw-r--r-- 1 boinc boinc      8192 Mar  9 20:10 boinc_mmap_file
[2026-03-09 20:10:40] -rw------- 1 boinc boinc      4754 Mar  9 20:10 pilotlog.txt
[2026-03-09 20:10:40] -rw------- 1 boinc boinc    333954 Mar  9 20:10 log.48966988._024265.job.log.1
[2026-03-09 20:10:40] -rw------- 1 boinc boinc       357 Mar  9 20:10 output.list
[2026-03-09 20:10:40] -rw-r--r-- 1 boinc boinc       620 Mar  9 20:10 runtime_log
[2026-03-09 20:10:40] -rw------- 1 boinc boinc    696320 Mar  9 20:10 result.tar.gz
[2026-03-09 20:10:40] -rw------- 1 boinc boinc       657 Mar  9 20:10 U5cLDmgArJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmn4ZLDmeKc8Bn.diag
[2026-03-09 20:10:40] -rw-r--r-- 1 boinc boinc      8970 Mar  9 20:10 runtime_log.err
[2026-03-09 20:10:40] -rw-r--r-- 1 boinc boinc     22172 Mar  9 20:10 stderr.txt
[2026-03-09 20:10:40] HITS file was successfully produced:
[2026-03-09 20:10:40] -rw------- 1 boinc boinc 202714893 Mar  9 20:09 shared/HITS.pool.root.1
[2026-03-09 20:10:40]  *** Contents of shared directory: ***
[2026-03-09 20:10:40] total 405832
[2026-03-09 20:10:40] -rw-r--r-- 2 boinc boinc 211537426 Mar  9 19:35 ATLAS.root_0
[2026-03-09 20:10:40] -rw-r--r-- 2 boinc boinc     15845 Mar  9 19:35 start_atlas.sh
[2026-03-09 20:10:40] -rw-r--r-- 2 boinc boinc    597969 Mar  9 19:35 input.tar.gz
[2026-03-09 20:10:40] -rw------- 1 boinc boinc 202714893 Mar  9 20:09 HITS.pool.root.1
[2026-03-09 20:10:40] -rw------- 1 boinc boinc    696320 Mar  9 20:10 result.tar.gz
20:10:42 (923723): run_atlas exited; CPU time 22321.805131
20:10:42 (923723): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN