Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:56:25 (3893502): wrapper (7.7.26015): starting
04:56:25 (3893502): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 04:56:25] Arguments: --nthreads 4
[2026-03-10 04:56:25] Threads: 4
[2026-03-10 04:56:25] Checking for CVMFS
[2026-03-10 04:56:25] No cvmfs_config command found, will try listing directly
[2026-03-10 04:56:25] CVMFS is ok
[2026-03-10 04:56:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 04:56:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 04:56:25] Further information can be found at the LHC@home message board.
[2026-03-10 04:56:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 04:56:25] Checking for apptainer binary...
[2026-03-10 04:56:25] which: no apptainer in ((null))
[2026-03-10 04:56:25] apptainer is not installed, using version from CVMFS
[2026-03-10 04:56:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 04:56:26] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot40/slots/10/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-10 04:56:26] apptainer works
[2026-03-10 04:56:26] Set ATHENA_PROC_NUMBER=4
[2026-03-10 04:56:26] Set ATHENA_CORE_NUMBER=4
[2026-03-10 04:56:26] Starting ATLAS job with PandaID=7047405214
[2026-03-10 04:56:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot40/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 06:38:52]  *** The last 200 lines of the pilot log: ***
[2026-03-10 06:38:52] 2026-03-10 05:38:08,274 | INFO     | total number of processed events: 400 (read)
[2026-03-10 06:38:52] 2026-03-10 05:38:08,292 | INFO     | using path: /var/lib/boinc/var/slot40/slots/10/PanDA_Pilot-7047405214/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 06:38:52] 2026-03-10 05:38:08,292 | INFO     | extracted standard info from prmon json
[2026-03-10 06:38:52] 2026-03-10 05:38:08,292 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 06:38:52] 2026-03-10 05:38:08,292 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 06:38:52] 2026-03-10 05:38:08,292 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 06:38:52] 2026-03-10 05:38:08,292 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 06:38:52] 2026-03-10 05:38:08,294 | INFO     | fitting pss+swap vs Time
[2026-03-10 06:38:52] 2026-03-10 05:38:08,294 | INFO     | sum of square deviations: 310052325.0
[2026-03-10 06:38:52] 2026-03-10 05:38:08,294 | INFO     | sum of deviations: 10514837088.500002
[2026-03-10 06:38:52] 2026-03-10 05:38:08,294 | INFO     | mean x: 1773118037.5
[2026-03-10 06:38:52] 2026-03-10 05:38:08,294 | INFO     | mean y: 2293757.69
[2026-03-10 06:38:52] 2026-03-10 05:38:08,294 | INFO     | intersect: -60129644627.204666
[2026-03-10 06:38:52] 2026-03-10 05:38:08,295 | INFO     | chi2: 1.1144437644642011
[2026-03-10 06:38:52] 2026-03-10 05:38:08,295 | INFO     | sum of square deviations: 265828240.0
[2026-03-10 06:38:52] 2026-03-10 05:38:08,295 | INFO     | sum of deviations: 9892446677.0
[2026-03-10 06:38:52] 2026-03-10 05:38:08,295 | INFO     | mean x: 1773117885.0
[2026-03-10 06:38:52] 2026-03-10 05:38:08,295 | INFO     | mean y: 2291613.431578947
[2026-03-10 06:38:52] 2026-03-10 05:38:08,295 | INFO     | intersect: -65981947417.74705
[2026-03-10 06:38:52] 2026-03-10 05:38:08,295 | INFO     | chi2: 1.1164170650422691
[2026-03-10 06:38:52] 2026-03-10 05:38:08,295 | INFO     | current chi2=1.1164170650422691 (change=-0.17706596249984055 %)
[2026-03-10 06:38:52] 2026-03-10 05:38:08,295 | INFO     | right removable region: 94
[2026-03-10 06:38:52] 2026-03-10 05:38:08,295 | INFO     | sum of square deviations: 265828240.0
[2026-03-10 06:38:52] 2026-03-10 05:38:08,296 | INFO     | sum of deviations: 885681813.9999999
[2026-03-10 06:38:52] 2026-03-10 05:38:08,296 | INFO     | mean x: 1773118190.0
[2026-03-10 06:38:52] 2026-03-10 05:38:08,296 | INFO     | mean y: 2325906.3368421053
[2026-03-10 06:38:52] 2026-03-10 05:38:08,296 | INFO     | intersect: -5905317822.394148
[2026-03-10 06:38:52] 2026-03-10 05:38:08,296 | INFO     | chi2: 0.00017318183824990933
[2026-03-10 06:38:52] 2026-03-10 05:38:08,296 | INFO     | current chi2=0.00017318183824990933 (change=99.9844602443145 %)
[2026-03-10 06:38:52] 2026-03-10 05:38:08,296 | INFO     | sum of square deviations: 226022842.5
[2026-03-10 06:38:52] 2026-03-10 05:38:08,296 | INFO     | sum of deviations: 620371098.0
[2026-03-10 06:38:52] 2026-03-10 05:38:08,296 | INFO     | mean x: 1773118342.5
[2026-03-10 06:38:52] 2026-03-10 05:38:08,296 | INFO     | mean y: 2326916.288888889
[2026-03-10 06:38:52] 2026-03-10 05:38:08,296 | INFO     | intersect: -4864399653.706642
[2026-03-10 06:38:52] 2026-03-10 05:38:08,296 | INFO     | chi2: 5.854421142507251e-05
[2026-03-10 06:38:52] 2026-03-10 05:38:08,296 | INFO     | current chi2=5.854421142507251e-05 (change=66.1949474513658 %)
[2026-03-10 06:38:52] 2026-03-10 05:38:08,296 | INFO     | sum of square deviations: 190403570.0
[2026-03-10 06:38:52] 2026-03-10 05:38:08,297 | INFO     | sum of deviations: 513520325.9999994
[2026-03-10 06:38:52] 2026-03-10 05:38:08,297 | INFO     | mean x: 1773118495.0
[2026-03-10 06:38:52] 2026-03-10 05:38:08,297 | INFO     | mean y: 2327371.7529411763
[2026-03-10 06:38:52] 2026-03-10 05:38:08,297 | INFO     | intersect: -4779790881.5394125
[2026-03-10 06:38:52] 2026-03-10 05:38:08,297 | INFO     | chi2: 5.6767919849536805e-05
[2026-03-10 06:38:52] 2026-03-10 05:38:08,297 | INFO     | current chi2=5.6767919849536805e-05 (change=3.034102829805956 %)
[2026-03-10 06:38:52] 2026-03-10 05:38:08,297 | INFO     | left removable region: 30
[2026-03-10 06:38:52] 2026-03-10 05:38:08,297 | INFO     | sum of square deviations: 81266640.0
[2026-03-10 06:38:52] 2026-03-10 05:38:08,297 | INFO     | sum of deviations: 216217062.0
[2026-03-10 06:38:52] 2026-03-10 05:38:08,297 | INFO     | mean x: 1773118769.5
[2026-03-10 06:38:52] 2026-03-10 05:38:08,297 | INFO     | mean y: 2328104.8125
[2026-03-10 06:38:52] 2026-03-10 05:38:08,297 | INFO     | intersect: -4715210739.150352
[2026-03-10 06:38:52] 2026-03-10 05:38:08,297 | INFO     | chi2: 2.0195314570557806e-05
[2026-03-10 06:38:52] 2026-03-10 05:38:08,297 | INFO     | current memory leak: 2.66 B/s (using 64 data points, chi2=0.00)
[2026-03-10 06:38:52] 2026-03-10 05:38:08,298 | INFO     | could have reported an average CPU frequency of 3585 MHz (7 samples)
[2026-03-10 06:38:52] 2026-03-10 05:38:08,298 | INFO     | ..............................
[2026-03-10 06:38:52] 2026-03-10 05:38:08,298 | INFO     | . Timing measurements:
[2026-03-10 06:38:52] 2026-03-10 05:38:08,298 | INFO     | . get job = 0 s
[2026-03-10 06:38:52] 2026-03-10 05:38:08,298 | INFO     | . initial setup = 4 s
[2026-03-10 06:38:52] 2026-03-10 05:38:08,298 | INFO     | . payload setup = 4 s
[2026-03-10 06:38:52] 2026-03-10 05:38:08,298 | INFO     | . stage-in = 0 s
[2026-03-10 06:38:52] 2026-03-10 05:38:08,298 | INFO     | . payload execution = 6067 s
[2026-03-10 06:38:52] 2026-03-10 05:38:08,298 | INFO     | . stage-out = 0 s
[2026-03-10 06:38:52] 2026-03-10 05:38:08,298 | INFO     | . log creation = 0 s
[2026-03-10 06:38:52] 2026-03-10 05:38:08,298 | INFO     | ..............................
[2026-03-10 06:38:52] 2026-03-10 05:38:08,349 | INFO     | 
[2026-03-10 06:38:52] 2026-03-10 05:38:08,349 | INFO     | job summary report
[2026-03-10 06:38:52] 2026-03-10 05:38:08,349 | INFO     | --------------------------------------------------
[2026-03-10 06:38:52] 2026-03-10 05:38:08,349 | INFO     | PanDA job id: 7047405214
[2026-03-10 06:38:52] 2026-03-10 05:38:08,349 | INFO     | task id: 48966988
[2026-03-10 06:38:52] 2026-03-10 05:38:08,349 | INFO     | errors: (none)
[2026-03-10 06:38:52] 2026-03-10 05:38:08,349 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 06:38:52] 2026-03-10 05:38:08,349 | INFO     | pilot state: finished 
[2026-03-10 06:38:52] 2026-03-10 05:38:08,349 | INFO     | transexitcode: 0
[2026-03-10 06:38:52] 2026-03-10 05:38:08,349 | INFO     | exeerrorcode: 0
[2026-03-10 06:38:52] 2026-03-10 05:38:08,349 | INFO     | exeerrordiag: 
[2026-03-10 06:38:52] 2026-03-10 05:38:08,349 | INFO     | exitcode: 0
[2026-03-10 06:38:52] 2026-03-10 05:38:08,349 | INFO     | exitmsg: OK
[2026-03-10 06:38:52] 2026-03-10 05:38:08,349 | INFO     | cpuconsumptiontime: 23434 s
[2026-03-10 06:38:52] 2026-03-10 05:38:08,349 | INFO     | nevents: 400
[2026-03-10 06:38:52] 2026-03-10 05:38:08,349 | INFO     | neventsw: 0
[2026-03-10 06:38:52] 2026-03-10 05:38:08,349 | INFO     | pid: 3905850
[2026-03-10 06:38:52] 2026-03-10 05:38:08,350 | INFO     | pgrp: 3905850
[2026-03-10 06:38:52] 2026-03-10 05:38:08,350 | INFO     | corecount: 4
[2026-03-10 06:38:52] 2026-03-10 05:38:08,350 | INFO     | event service: False
[2026-03-10 06:38:52] 2026-03-10 05:38:08,350 | INFO     | sizes: {0: 2280283, 10: 2280283, 6076: 2307101, 6077: 2316123, 6079: 2316179, 6080: 2316373}
[2026-03-10 06:38:52] 2026-03-10 05:38:08,350 | INFO     | --------------------------------------------------
[2026-03-10 06:38:52] 2026-03-10 05:38:08,350 | INFO     | 
[2026-03-10 06:38:52] 2026-03-10 05:38:08,350 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot40/slots/10
[2026-03-10 06:38:52] 2026-03-10 05:38:08,366 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 06:38:52] 2026-03-10 05:38:08,367 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 06:38:52] 2026-03-10 05:38:08,367 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 06:38:52] 2026-03-10 05:38:08,367 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 06:38:52] 2026-03-10 05:38:08,367 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 06:38:52] 2026-03-10 05:38:08,367 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 06:38:52] 2026-03-10 05:38:08,367 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 06:38:52] 2026-03-10 05:38:08,367 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 06:38:52] 2026-03-10 05:38:08,367 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 06:38:52] 2026-03-10 05:38:08,367 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 06:38:52] 2026-03-10 05:38:08,367 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 06:38:52] 2026-03-10 05:38:08,367 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 06:38:52] 2026-03-10 05:38:08,367 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 06:38:52] 2026-03-10 05:38:08,367 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 06:38:52] 2026-03-10 05:38:08,367 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 06:38:52] 2026-03-10 05:38:08,367 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 06:38:52] 2026-03-10 05:38:08,367 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 06:38:52] 2026-03-10 05:38:08,367 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 06:38:52] 2026-03-10 05:38:08,367 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 06:38:52] 2026-03-10 05:38:08,367 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 06:38:52] 2026-03-10 05:38:08,367 | INFO     | job 7047405214 has completed (purged errors)
[2026-03-10 06:38:52] 2026-03-10 05:38:08,367 | INFO     | overall cleanup function is called
[2026-03-10 06:38:52] 2026-03-10 05:38:09,373 | INFO     | --- collectZombieJob: --- 10, [3905850]
[2026-03-10 06:38:52] 2026-03-10 05:38:09,374 | INFO     | zombie collector waiting for pid 3905850
[2026-03-10 06:38:52] 2026-03-10 05:38:09,374 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 06:38:52] 2026-03-10 05:38:09,374 | INFO     | collected zombie processes
[2026-03-10 06:38:52] 2026-03-10 05:38:09,374 | INFO     | will attempt to kill all subprocesses of pid=3905850
[2026-03-10 06:38:52] 2026-03-10 05:38:09,795 | INFO     | process IDs to be killed: [3905850] (in reverse order)
[2026-03-10 06:38:52] 2026-03-10 05:38:10,012 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 06:38:52] 2026-03-10 05:38:10,012 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 06:38:52] 2026-03-10 05:38:10,037 | INFO     | did not find any defunct processes belonging to 3905850
[2026-03-10 06:38:52] 2026-03-10 05:38:10,062 | INFO     | did not find any defunct processes belonging to 3905850
[2026-03-10 06:38:52] 2026-03-10 05:38:10,062 | INFO     | ready for new job
[2026-03-10 06:38:52] 2026-03-10 05:38:10,062 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 06:38:52] 2026-03-10 05:38:10,063 | INFO     | **************************************
[2026-03-10 06:38:52] 2026-03-10 05:38:10,064 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 06:38:52] 2026-03-10 05:38:10,064 | INFO     | **************************************
[2026-03-10 06:38:52] 2026-03-10 05:38:10,064 | INFO     | 
[2026-03-10 06:38:52] 2026-03-10 05:38:10,069 | INFO     | architecture information:
[2026-03-10 06:38:52] 2026-03-10 05:38:10,070 | INFO     | executing command: cat /etc/os-release
[2026-03-10 06:38:52] 2026-03-10 05:38:10,081 | INFO     | cat /etc/os-release:
[2026-03-10 06:38:52] NAME="CentOS Linux"
[2026-03-10 06:38:52] VERSION="7 (Core)"
[2026-03-10 06:38:52] ID="centos"
[2026-03-10 06:38:52] ID_LIKE="rhel fedora"
[2026-03-10 06:38:52] VERSION_ID="7"
[2026-03-10 06:38:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 06:38:52] ANSI_COLOR="0;31"
[2026-03-10 06:38:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 06:38:52] HOME_URL="https://www.centos.org/"
[2026-03-10 06:38:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 06:38:52] 
[2026-03-10 06:38:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 06:38:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 06:38:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 06:38:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 06:38:52] 
[2026-03-10 06:38:52] 2026-03-10 05:38:10,081 | INFO     | **************************************
[2026-03-10 06:38:52] 2026-03-10 05:38:10,584 | INFO     | executing command: df -mP /var/lib/boinc/var/slot40/slots/10
[2026-03-10 06:38:52] 2026-03-10 05:38:10,598 | INFO     | sufficient remaining disk space (20539506688 B)
[2026-03-10 06:38:52] 2026-03-10 05:38:10,599 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 06:38:52] 2026-03-10 05:38:10,599 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 06:38:52] 2026-03-10 05:38:10,599 | INFO     | update_server=False
[2026-03-10 06:38:52] 2026-03-10 05:38:10,599 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 06:38:52] 2026-03-10 05:38:10,599 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 06:38:52] 2026-03-10 05:38:10,768 | INFO     | all payload control threads have been joined
[2026-03-10 06:38:52] 2026-03-10 05:38:10,818 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-10 06:38:52] 2026-03-10 05:38:10,819 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-10 06:38:52] 2026-03-10 05:38:10,819 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 06:38:52] 2026-03-10 05:38:10,819 | INFO     | will abort loop
[2026-03-10 06:38:52] 2026-03-10 05:38:11,059 | INFO     | all job control threads have been joined
[2026-03-10 06:38:52] 2026-03-10 05:38:11,386 | INFO     | all data control threads have been joined
[2026-03-10 06:38:52] 2026-03-10 05:38:11,604 | INFO     | [job] retrieve thread has finished
[2026-03-10 06:38:52] 2026-03-10 05:38:11,611 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 06:38:52] 2026-03-10 05:38:11,647 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 06:38:52] 2026-03-10 05:38:11,662 | INFO     | [payload] validate_post thread has finished
[2026-03-10 06:38:52] 2026-03-10 05:38:11,773 | INFO     | [payload] control thread has finished
[2026-03-10 06:38:52] 2026-03-10 05:38:11,823 | INFO     | [job] job monitor thread has finished
[2026-03-10 06:38:52] 2026-03-10 05:38:11,930 | INFO     | [data] copytool_in thread has finished
[2026-03-10 06:38:52] 2026-03-10 05:38:12,066 | INFO     | [job] control thread has finished
[2026-03-10 06:38:52] 2026-03-10 05:38:12,392 | INFO     | [data] control thread has finished
[2026-03-10 06:38:52] 2026-03-10 05:38:12,575 | INFO     | [payload] failed_post thread has finished
[2026-03-10 06:38:52] 2026-03-10 05:38:12,603 | INFO     | [data] copytool_out thread has finished
[2026-03-10 06:38:52] 2026-03-10 05:38:12,717 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 06:38:52] 2026-03-10 05:38:13,035 | INFO     | [job] validate thread has finished
[2026-03-10 06:38:52] 2026-03-10 05:38:13,360 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 06:38:52] 2026-03-10 05:38:13,483 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 06:38:52] 2026-03-10 05:38:14,365 | INFO     | [job] queue monitor thread has finished
[2026-03-10 06:38:52] 2026-03-10 05:38:17,489 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 06:38:52] 2026-03-10 05:38:21,174 | INFO     | job.realtimelogging is not enabled
[2026-03-10 06:38:52] 2026-03-10 05:38:22,182 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 06:38:52] 2026-03-10 05:38:40,659 | INFO     | PID=3898031 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 06:38:52] 2026-03-10 05:38:40,659 | INFO     | .. there are 60 such processes running
[2026-03-10 06:38:52] 2026-03-10 05:38:40,659 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 06:38:52] 2026-03-10 05:38:40,659 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 06:38:52] 2026-03-10 05:38:40,659 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 06:38:52] 2026-03-10 05:38:47,342 | INFO     | [monitor] cgroup control has ended
[2026-03-10 06:38:52] 2026-03-10 05:38:47,438 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23404394317632)>', '<ExcThread(monitor, started 23404154726144)>']
[2026-03-10 06:38:52] 2026-03-10 05:38:47,695 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 06:38:52] 2026-03-10 05:38:47,695 | INFO     | [monitor] control thread has ended
[2026-03-10 06:38:52] 2026-03-10 05:38:52,464 | INFO     | all workflow threads have been joined
[2026-03-10 06:38:52] 2026-03-10 05:38:52,467 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 06:38:52] 2026-03-10 05:38:52,467 | INFO     | traces error code: 0
[2026-03-10 06:38:52] 2026-03-10 05:38:52,467 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 06:38:52] 2026-03-10 05:38:52,669 [wrapper] ==== pilot stdout END ====
[2026-03-10 06:38:52] 2026-03-10 05:38:52,672 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 06:38:52] 2026-03-10 05:38:52,674 [wrapper] pilotpid: 3898031
[2026-03-10 06:38:52] 2026-03-10 05:38:52,676 [wrapper] Pilot exit status: 0
[2026-03-10 06:38:52] 2026-03-10 05:38:52,683 [wrapper] pandaids: 7047405214
[2026-03-10 06:38:52] 2026-03-10 05:38:52,792 [wrapper] cleanup supervisor_pilot  732573 3898032
[2026-03-10 06:38:52] 2026-03-10 05:38:52,795 [wrapper] Test setup, not cleaning
[2026-03-10 06:38:52] 2026-03-10 05:38:52,797 [wrapper] apfmon messages muted
[2026-03-10 06:38:52] 2026-03-10 05:38:52,800 [wrapper] ==== wrapper stdout END ====
[2026-03-10 06:38:52] 2026-03-10 05:38:52,803 [wrapper] ==== wrapper stderr END ====
[2026-03-10 06:38:52]  *** Error codes and diagnostics ***
[2026-03-10 06:38:52]     "exeErrorCode": 0,
[2026-03-10 06:38:52]     "exeErrorDiag": "",
[2026-03-10 06:38:52]     "pilotErrorCode": 0,
[2026-03-10 06:38:52]     "pilotErrorDiag": "",
[2026-03-10 06:38:52]  *** Listing of results directory ***
[2026-03-10 06:38:52] total 406348
[2026-03-10 06:38:52] -rw-r--r--. 1 boinc boinc      5111 Mar  9 15:53 queuedata.json
[2026-03-10 06:38:52] -rw-r--r--. 1 boinc boinc    584627 Mar  9 15:53 pilot3.tar.gz
[2026-03-10 06:38:52] -rwx------. 1 boinc boinc     36322 Mar  9 15:53 runpilot2-wrapper.sh
[2026-03-10 06:38:52] -rw-r--r--. 1 boinc boinc       100 Mar 10 04:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 06:38:52] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 04:56 run_atlas
[2026-03-10 06:38:52] -rw-r--r--. 1 boinc boinc       105 Mar 10 04:56 job.xml
[2026-03-10 06:38:52] -rw-r--r--. 2 boinc boinc    597965 Mar 10 04:56 input.tar.gz
[2026-03-10 06:38:52] -rw-r--r--. 1 boinc boinc      6706 Mar 10 04:56 init_data.xml
[2026-03-10 06:38:52] -rw-r--r--. 2 boinc boinc 211537426 Mar 10 04:56 EVNT.48966985._000945.pool.root.1
[2026-03-10 06:38:52] -rw-r--r--. 2 boinc boinc     15845 Mar 10 04:56 start_atlas.sh
[2026-03-10 06:38:52] drwxrwx--x. 2 boinc boinc      4096 Mar 10 04:56 shared
[2026-03-10 06:38:52] -rw-r--r--. 1 boinc boinc         0 Mar 10 04:56 boinc_lockfile
[2026-03-10 06:38:52] -rw-r--r--. 1 boinc boinc      2592 Mar 10 04:56 pandaJob.out
[2026-03-10 06:38:52] -rw-------. 1 boinc boinc   1006495 Mar 10 04:56 agis_schedconf.cvmfs.json
[2026-03-10 06:38:52] -rw-------. 1 boinc boinc   1511578 Mar 10 04:56 agis_ddmendpoints.agis.ALL.json
[2026-03-10 06:38:52] -rw-------. 1 boinc boinc       444 Mar 10 04:56 workernode_map.json
[2026-03-10 06:38:52] drwx------. 5 boinc boinc      4096 Mar 10 04:56 pilot3
[2026-03-10 06:38:52] -rw-------. 1 boinc boinc 198248907 Mar 10 06:37 HITS.48966988._024280.pool.root.1
[2026-03-10 06:38:52] -rw-------. 1 boinc boinc        95 Mar 10 06:37 pilot_heartbeat.json
[2026-03-10 06:38:52] -rw-r--r--. 1 boinc boinc       529 Mar 10 06:37 boinc_task_state.xml
[2026-03-10 06:38:52] -rw-------. 1 boinc boinc      1031 Mar 10 06:38 memory_monitor_summary.json
[2026-03-10 06:38:52] -rw-------. 1 boinc boinc    303772 Mar 10 06:38 log.48966988._024280.job.log.tgz.1
[2026-03-10 06:38:52] -rw-------. 1 boinc boinc      6355 Mar 10 06:38 heartbeat.json
[2026-03-10 06:38:52] -rw-r--r--. 1 boinc boinc      8192 Mar 10 06:38 boinc_mmap_file
[2026-03-10 06:38:52] -rw-------. 1 boinc boinc      5088 Mar 10 06:38 pilotlog.txt
[2026-03-10 06:38:52] -rw-r--r--. 1 boinc boinc        27 Mar 10 06:38 wrapper_checkpoint.txt
[2026-03-10 06:38:52] -rw-------. 1 boinc boinc    883115 Mar 10 06:38 log.48966988._024280.job.log.1
[2026-03-10 06:38:52] -rw-------. 1 boinc boinc       357 Mar 10 06:38 output.list
[2026-03-10 06:38:52] -rw-r--r--. 1 boinc boinc       620 Mar 10 06:38 runtime_log
[2026-03-10 06:38:52] -rw-------. 1 boinc boinc   1208320 Mar 10 06:38 result.tar.gz
[2026-03-10 06:38:52] -rw-r--r--. 1 boinc boinc      9221 Mar 10 06:38 runtime_log.err
[2026-03-10 06:38:52] -rw-------. 1 boinc boinc       663 Mar 10 06:38 6rvLDmgArJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmz4ZLDmzv7rNo.diag
[2026-03-10 06:38:52] -rw-r--r--. 1 boinc boinc     20808 Mar 10 06:38 stderr.txt
[2026-03-10 06:38:52] HITS file was successfully produced:
[2026-03-10 06:38:52] -rw-------. 1 boinc boinc 198248907 Mar 10 06:37 shared/HITS.pool.root.1
[2026-03-10 06:38:52]  *** Contents of shared directory: ***
[2026-03-10 06:38:52] total 401972
[2026-03-10 06:38:52] -rw-r--r--. 2 boinc boinc    597965 Mar 10 04:56 input.tar.gz
[2026-03-10 06:38:52] -rw-r--r--. 2 boinc boinc 211537426 Mar 10 04:56 ATLAS.root_0
[2026-03-10 06:38:52] -rw-r--r--. 2 boinc boinc     15845 Mar 10 04:56 start_atlas.sh
[2026-03-10 06:38:52] -rw-------. 1 boinc boinc 198248907 Mar 10 06:37 HITS.pool.root.1
[2026-03-10 06:38:52] -rw-------. 1 boinc boinc   1208320 Mar 10 06:38 result.tar.gz
06:38:54 (3893502): run_atlas exited; CPU time 23683.733424
06:38:54 (3893502): called boinc_finish(0)

</stderr_txt>
]]>

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