Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
17:05:15 (1738433): wrapper (7.7.26015): starting
17:05:15 (1738433): wrapper: running run_atlas (--nthreads 12)
[2026-03-13 17:05:15] Arguments: --nthreads 12
[2026-03-13 17:05:15] Threads: 12
[2026-03-13 17:05:15] Checking for CVMFS
[2026-03-13 17:05:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 17:05:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 17:05:16] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 17:05:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 17:05:17] 2.13.3.0 4052807 15085 71532 157247 0 188 3981945 4096001 17070 130560 0 102080318 99.999 566897 3637 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-03-13 17:05:17] CVMFS is ok
[2026-03-13 17:05:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 17:05:17] Checking for apptainer binary...
[2026-03-13 17:05:17] apptainer is not installed, using version from CVMFS
[2026-03-13 17:05:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 17:05:18] epyc7v12
[2026-03-13 17:05:18] apptainer works
[2026-03-13 17:05:18] Set ATHENA_PROC_NUMBER=12
[2026-03-13 17:05:18] Set ATHENA_CORE_NUMBER=12
[2026-03-13 17:05:18] Starting ATLAS job with PandaID=7039851183
[2026-03-13 17:05:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31428/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 19:07:44]  *** The last 200 lines of the pilot log: ***
[2026-03-13 19:07:44] 2026-03-13 19:07:10,764 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 19:07:44] 2026-03-13 19:07:10,764 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 19:07:44] 2026-03-13 19:07:10,764 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 19:07:44] 2026-03-13 19:07:10,764 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 19:07:44] 2026-03-13 19:07:10,770 | INFO     | fitting pss+swap vs Time
[2026-03-13 19:07:44] 2026-03-13 19:07:10,770 | INFO     | sum of square deviations: 522502820.0
[2026-03-13 19:07:44] 2026-03-13 19:07:10,773 | INFO     | sum of deviations: 17337922030.0
[2026-03-13 19:07:44] 2026-03-13 19:07:10,773 | INFO     | mean x: 1773425192.0
[2026-03-13 19:07:44] 2026-03-13 19:07:10,773 | INFO     | mean y: 2576205.4285714286
[2026-03-13 19:07:44] 2026-03-13 19:07:10,773 | INFO     | intersect: -58844010890.37654
[2026-03-13 19:07:44] 2026-03-13 19:07:10,774 | INFO     | chi2: 2.484609533390378
[2026-03-13 19:07:44] 2026-03-13 19:07:10,774 | INFO     | sum of square deviations: 459366752.5
[2026-03-13 19:07:44] 2026-03-13 19:07:10,778 | INFO     | sum of deviations: 24859682976.500004
[2026-03-13 19:07:44] 2026-03-13 19:07:10,778 | INFO     | mean x: 1773425039.5
[2026-03-13 19:07:44] 2026-03-13 19:07:10,778 | INFO     | mean y: 2593661.8157894737
[2026-03-13 19:07:44] 2026-03-13 19:07:10,779 | INFO     | intersect: -95970360463.8901
[2026-03-13 19:07:44] 2026-03-13 19:07:10,779 | INFO     | chi2: 1.6528986663704415
[2026-03-13 19:07:44] 2026-03-13 19:07:10,779 | INFO     | current chi2=1.6528986663704415 (change=33.47451001224422 %)
[2026-03-13 19:07:44] 2026-03-13 19:07:10,780 | INFO     | sum of square deviations: 401533110.0
[2026-03-13 19:07:44] 2026-03-13 19:07:10,780 | INFO     | sum of deviations: 23560937558.0
[2026-03-13 19:07:44] 2026-03-13 19:07:10,780 | INFO     | mean x: 1773424887.0
[2026-03-13 19:07:44] 2026-03-13 19:07:10,780 | INFO     | mean y: 2590234.9633027525
[2026-03-13 19:07:44] 2026-03-13 19:07:10,780 | INFO     | intersect: -104057453596.56583
[2026-03-13 19:07:44] 2026-03-13 19:07:10,781 | INFO     | chi2: 1.6539999161992078
[2026-03-13 19:07:44] 2026-03-13 19:07:10,781 | INFO     | current chi2=1.6539999161992078 (change=-0.06662536858261048 %)
[2026-03-13 19:07:44] 2026-03-13 19:07:10,786 | INFO     | right removable region: 108
[2026-03-13 19:07:44] 2026-03-13 19:07:10,786 | INFO     | sum of square deviations: 459366752.5
[2026-03-13 19:07:44] 2026-03-13 19:07:10,787 | INFO     | sum of deviations: -4602570170.0
[2026-03-13 19:07:44] 2026-03-13 19:07:10,787 | INFO     | mean x: 1773425344.5
[2026-03-13 19:07:44] 2026-03-13 19:07:10,787 | INFO     | mean y: 2628478.6315789474
[2026-03-13 19:07:44] 2026-03-13 19:07:10,787 | INFO     | intersect: 17771251359.79596
[2026-03-13 19:07:44] 2026-03-13 19:07:10,788 | INFO     | chi2: 0.9221624688094551
[2026-03-13 19:07:44] 2026-03-13 19:07:10,788 | INFO     | current chi2=0.9221624688094551 (change=62.88501446941175 %)
[2026-03-13 19:07:44] 2026-03-13 19:07:10,788 | INFO     | sum of square deviations: 401533110.0
[2026-03-13 19:07:44] 2026-03-13 19:07:10,789 | INFO     | sum of deviations: -5755599429.0
[2026-03-13 19:07:44] 2026-03-13 19:07:10,789 | INFO     | mean x: 1773425497.0
[2026-03-13 19:07:44] 2026-03-13 19:07:10,789 | INFO     | mean y: 2631245.376146789
[2026-03-13 19:07:44] 2026-03-13 19:07:10,789 | INFO     | intersect: 25423017568.952904
[2026-03-13 19:07:44] 2026-03-13 19:07:10,792 | INFO     | chi2: 0.8776209195301157
[2026-03-13 19:07:44] 2026-03-13 19:07:10,792 | INFO     | current chi2=0.8776209195301157 (change=4.830119505605572 %)
[2026-03-13 19:07:44] 2026-03-13 19:07:10,792 | INFO     | left removable region: 20
[2026-03-13 19:07:44] 2026-03-13 19:07:10,793 | INFO     | sum of square deviations: 211285822.0
[2026-03-13 19:07:44] 2026-03-13 19:07:10,793 | INFO     | sum of deviations: 1308759361.5
[2026-03-13 19:07:44] 2026-03-13 19:07:10,793 | INFO     | mean x: 1773425466.5
[2026-03-13 19:07:44] 2026-03-13 19:07:10,793 | INFO     | mean y: 2654096.8068181816
[2026-03-13 19:07:44] 2026-03-13 19:07:10,793 | INFO     | intersect: -10982404717.051405
[2026-03-13 19:07:44] 2026-03-13 19:07:10,794 | INFO     | chi2: 0.00015185924774461954
[2026-03-13 19:07:44] 2026-03-13 19:07:10,794 | INFO     | current memory leak: 6.19 B/s (using 88 data points, chi2=0.00)
[2026-03-13 19:07:44] 2026-03-13 19:07:10,808 | INFO     | could have reported an average CPU frequency of 2393 MHz (8 samples)
[2026-03-13 19:07:44] 2026-03-13 19:07:10,809 | INFO     | ..............................
[2026-03-13 19:07:44] 2026-03-13 19:07:10,809 | INFO     | . Timing measurements:
[2026-03-13 19:07:44] 2026-03-13 19:07:10,809 | INFO     | . get job = 0 s
[2026-03-13 19:07:44] 2026-03-13 19:07:10,809 | INFO     | . initial setup = 18 s
[2026-03-13 19:07:44] 2026-03-13 19:07:10,809 | INFO     | . payload setup = 14 s
[2026-03-13 19:07:44] 2026-03-13 19:07:10,809 | INFO     | . stage-in = 0 s
[2026-03-13 19:07:44] 2026-03-13 19:07:10,809 | INFO     | . payload execution = 7243 s
[2026-03-13 19:07:44] 2026-03-13 19:07:10,809 | INFO     | . stage-out = 1 s
[2026-03-13 19:07:44] 2026-03-13 19:07:10,809 | INFO     | . log creation = 0 s
[2026-03-13 19:07:44] 2026-03-13 19:07:10,809 | INFO     | ..............................
[2026-03-13 19:07:44] 2026-03-13 19:07:11,285 | INFO     | 
[2026-03-13 19:07:44] 2026-03-13 19:07:11,285 | INFO     | job summary report
[2026-03-13 19:07:44] 2026-03-13 19:07:11,285 | INFO     | --------------------------------------------------
[2026-03-13 19:07:44] 2026-03-13 19:07:11,285 | INFO     | PanDA job id: 7039851183
[2026-03-13 19:07:44] 2026-03-13 19:07:11,286 | INFO     | task id: 48955010
[2026-03-13 19:07:44] 2026-03-13 19:07:11,286 | INFO     | errors: (none)
[2026-03-13 19:07:44] 2026-03-13 19:07:11,286 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 19:07:44] 2026-03-13 19:07:11,286 | INFO     | pilot state: finished 
[2026-03-13 19:07:44] 2026-03-13 19:07:11,286 | INFO     | transexitcode: 0
[2026-03-13 19:07:44] 2026-03-13 19:07:11,286 | INFO     | exeerrorcode: 0
[2026-03-13 19:07:44] 2026-03-13 19:07:11,286 | INFO     | exeerrordiag: 
[2026-03-13 19:07:44] 2026-03-13 19:07:11,286 | INFO     | exitcode: 0
[2026-03-13 19:07:44] 2026-03-13 19:07:11,286 | INFO     | exitmsg: OK
[2026-03-13 19:07:44] 2026-03-13 19:07:11,286 | INFO     | cpuconsumptiontime: 43931 s
[2026-03-13 19:07:44] 2026-03-13 19:07:11,286 | INFO     | nevents: 400
[2026-03-13 19:07:44] 2026-03-13 19:07:11,286 | INFO     | neventsw: 0
[2026-03-13 19:07:44] 2026-03-13 19:07:11,287 | INFO     | pid: 1747624
[2026-03-13 19:07:44] 2026-03-13 19:07:11,287 | INFO     | pgrp: 1747624
[2026-03-13 19:07:44] 2026-03-13 19:07:11,287 | INFO     | corecount: 12
[2026-03-13 19:07:44] 2026-03-13 19:07:11,287 | INFO     | event service: False
[2026-03-13 19:07:44] 2026-03-13 19:07:11,289 | INFO     | sizes: {0: 2279767, 1: 2280228, 2: 2280228, 7261: 2308043, 7262: 2308042, 7264: 2317142, 7265: 2317520}
[2026-03-13 19:07:44] 2026-03-13 19:07:11,289 | INFO     | --------------------------------------------------
[2026-03-13 19:07:44] 2026-03-13 19:07:11,289 | INFO     | 
[2026-03-13 19:07:44] 2026-03-13 19:07:11,289 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31428/slots/0
[2026-03-13 19:07:44] 2026-03-13 19:07:11,352 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 19:07:44] 2026-03-13 19:07:11,352 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 19:07:44] 2026-03-13 19:07:11,352 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 19:07:44] 2026-03-13 19:07:11,355 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 19:07:44] 2026-03-13 19:07:11,355 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 19:07:44] 2026-03-13 19:07:11,355 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 19:07:44] 2026-03-13 19:07:11,355 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 19:07:44] 2026-03-13 19:07:11,355 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 19:07:44] 2026-03-13 19:07:11,356 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 19:07:44] 2026-03-13 19:07:11,356 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 19:07:44] 2026-03-13 19:07:11,356 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 19:07:44] 2026-03-13 19:07:11,356 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 19:07:44] 2026-03-13 19:07:11,356 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 19:07:44] 2026-03-13 19:07:11,356 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 19:07:44] 2026-03-13 19:07:11,356 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 19:07:44] 2026-03-13 19:07:11,356 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 19:07:44] 2026-03-13 19:07:11,356 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 19:07:44] 2026-03-13 19:07:11,356 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 19:07:44] 2026-03-13 19:07:11,357 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 19:07:44] 2026-03-13 19:07:11,357 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 19:07:44] 2026-03-13 19:07:11,357 | INFO     | job 7039851183 has completed (purged errors)
[2026-03-13 19:07:44] 2026-03-13 19:07:11,357 | INFO     | overall cleanup function is called
[2026-03-13 19:07:44] 2026-03-13 19:07:11,956 | WARNING  | process 1747624 can no longer be monitored (due to stat problems) - aborting
[2026-03-13 19:07:44] 2026-03-13 19:07:12,378 | INFO     | --- collectZombieJob: --- 10, [1747624]
[2026-03-13 19:07:44] 2026-03-13 19:07:12,381 | INFO     | zombie collector waiting for pid 1747624
[2026-03-13 19:07:44] 2026-03-13 19:07:12,381 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 19:07:44] 2026-03-13 19:07:12,381 | INFO     | collected zombie processes
[2026-03-13 19:07:44] 2026-03-13 19:07:12,381 | INFO     | will attempt to kill all subprocesses of pid=1747624
[2026-03-13 19:07:44] 2026-03-13 19:07:12,663 | INFO     | using path: /opt/boinc/instance_homes/boinc_31428/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 19:07:44] 2026-03-13 19:07:14,107 | INFO     | process IDs to be killed: [1747624] (in reverse order)
[2026-03-13 19:07:44] 2026-03-13 19:07:14,326 | INFO     | number of running child processes to parent process 1747624: 1
[2026-03-13 19:07:44] 2026-03-13 19:07:14,326 | INFO     | maximum number of monitored processes: 6
[2026-03-13 19:07:44] 2026-03-13 19:07:14,327 | INFO     | aborting job monitoring since job object (job id=7039851183) has expired
[2026-03-13 19:07:44] 2026-03-13 19:07:14,565 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 19:07:44] 2026-03-13 19:07:14,565 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 19:07:44] 2026-03-13 19:07:14,616 | INFO     | did not find any defunct processes belonging to 1747624
[2026-03-13 19:07:44] 2026-03-13 19:07:14,642 | INFO     | did not find any defunct processes belonging to 1747624
[2026-03-13 19:07:44] 2026-03-13 19:07:14,642 | INFO     | ready for new job
[2026-03-13 19:07:44] 2026-03-13 19:07:14,642 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 19:07:44] 2026-03-13 19:07:14,644 | INFO     | **************************************
[2026-03-13 19:07:44] 2026-03-13 19:07:14,645 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-13 19:07:44] 2026-03-13 19:07:14,645 | INFO     | **************************************
[2026-03-13 19:07:44] 2026-03-13 19:07:14,645 | INFO     | 
[2026-03-13 19:07:44] 2026-03-13 19:07:14,654 | INFO     | architecture information:
[2026-03-13 19:07:44] 2026-03-13 19:07:14,656 | INFO     | executing command: cat /etc/os-release
[2026-03-13 19:07:44] 2026-03-13 19:07:14,705 | INFO     | cat /etc/os-release:
[2026-03-13 19:07:44] NAME="CentOS Linux"
[2026-03-13 19:07:44] VERSION="7 (Core)"
[2026-03-13 19:07:44] ID="centos"
[2026-03-13 19:07:44] ID_LIKE="rhel fedora"
[2026-03-13 19:07:44] VERSION_ID="7"
[2026-03-13 19:07:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 19:07:44] ANSI_COLOR="0;31"
[2026-03-13 19:07:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 19:07:44] HOME_URL="https://www.centos.org/"
[2026-03-13 19:07:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 19:07:44] 
[2026-03-13 19:07:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 19:07:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 19:07:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 19:07:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 19:07:44] 
[2026-03-13 19:07:44] 2026-03-13 19:07:14,705 | INFO     | **************************************
[2026-03-13 19:07:44] 2026-03-13 19:07:15,207 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31428/slots/0
[2026-03-13 19:07:44] 2026-03-13 19:07:15,253 | INFO     | sufficient remaining disk space (166660669440 B)
[2026-03-13 19:07:44] 2026-03-13 19:07:15,253 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 19:07:44] 2026-03-13 19:07:15,254 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 19:07:44] 2026-03-13 19:07:15,254 | INFO     | update_server=False
[2026-03-13 19:07:44] 2026-03-13 19:07:15,254 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 19:07:44] 2026-03-13 19:07:15,254 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 19:07:44] 2026-03-13 19:07:15,254 | INFO     | will abort loop
[2026-03-13 19:07:44] 2026-03-13 19:07:15,365 | INFO     | [monitor] cgroup control has ended
[2026-03-13 19:07:44] 2026-03-13 19:07:15,795 | INFO     | all data control threads have been joined
[2026-03-13 19:07:44] 2026-03-13 19:07:15,990 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 19:07:44] 2026-03-13 19:07:16,062 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 19:07:44] 2026-03-13 19:07:16,259 | INFO     | [job] retrieve thread has finished
[2026-03-13 19:07:44] 2026-03-13 19:07:16,260 | INFO     | [job] job monitor thread has finished
[2026-03-13 19:07:44] 2026-03-13 19:07:16,277 | INFO     | all payload control threads have been joined
[2026-03-13 19:07:44] 2026-03-13 19:07:16,437 | INFO     | [data] copytool_in thread has finished
[2026-03-13 19:07:44] 2026-03-13 19:07:16,528 | INFO     | [payload] failed_post thread has finished
[2026-03-13 19:07:44] 2026-03-13 19:07:16,599 | INFO     | all job control threads have been joined
[2026-03-13 19:07:44] 2026-03-13 19:07:16,682 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 19:07:44] 2026-03-13 19:07:16,800 | INFO     | [data] control thread has finished
[2026-03-13 19:07:44] 2026-03-13 19:07:16,818 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 19:07:44] 2026-03-13 19:07:16,939 | INFO     | [job] validate thread has finished
[2026-03-13 19:07:44] 2026-03-13 19:07:17,003 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 19:07:44] 2026-03-13 19:07:17,067 | INFO     | [job] queue monitor thread has finished
[2026-03-13 19:07:44] 2026-03-13 19:07:17,068 | INFO     | [payload] validate_post thread has finished
[2026-03-13 19:07:44] 2026-03-13 19:07:17,283 | INFO     | [payload] control thread has finished
[2026-03-13 19:07:44] 2026-03-13 19:07:17,415 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 19:07:44] 2026-03-13 19:07:17,590 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 19:07:44] 2026-03-13 19:07:17,604 | INFO     | [job] control thread has finished
[2026-03-13 19:07:44] 2026-03-13 19:07:17,995 | INFO     | [data] copytool_out thread has finished
[2026-03-13 19:07:44] 2026-03-13 19:07:20,687 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 19:07:44] 2026-03-13 19:07:22,690 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138257349879616)>', '<ExcThread(monitor, started 138256674977536)>']
[2026-03-13 19:07:44] 2026-03-13 19:07:27,716 | INFO     | all workflow threads have been joined
[2026-03-13 19:07:44] 2026-03-13 19:07:27,717 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 19:07:44] 2026-03-13 19:07:27,717 | INFO     | traces error code: 0
[2026-03-13 19:07:44] 2026-03-13 19:07:27,717 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 19:07:44] 2026-03-13 19:07:44,102 | INFO     | PID=1742630 has CPU usage=12.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-13 19:07:44] 2026-03-13 19:07:44,103 | INFO     | .. there are 20 such processes running
[2026-03-13 19:07:44] 2026-03-13 19:07:44,103 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 19:07:44] 2026-03-13 19:07:44,103 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 19:07:44] 2026-03-13 19:07:44,103 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 19:07:44] 2026-03-13 19:07:44,103 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 19:07:44] 2026-03-13 19:07:44,103 | CRITICAL | thread 'MainThread' is not alive
[2026-03-13 19:07:44] 2026-03-13 19:07:44,104 | INFO     | [monitor] control thread has ended
[2026-03-13 19:07:44] 2026-03-13 19:07:44,403 [wrapper] ==== pilot stdout END ====
[2026-03-13 19:07:44] 2026-03-13 19:07:44,408 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 19:07:44] 2026-03-13 19:07:44,412 [wrapper] pilotpid: 1742630
[2026-03-13 19:07:44] 2026-03-13 19:07:44,420 [wrapper] Pilot exit status: 0
[2026-03-13 19:07:44] 2026-03-13 19:07:44,454 [wrapper] pandaids: 7039851183
[2026-03-13 19:07:44] 2026-03-13 19:07:44,651 [wrapper] cleanup supervisor_pilot 1985232 1742631
[2026-03-13 19:07:44] 2026-03-13 19:07:44,660 [wrapper] Test setup, not cleaning
[2026-03-13 19:07:44] 2026-03-13 19:07:44,669 [wrapper] apfmon messages muted
[2026-03-13 19:07:44] 2026-03-13 19:07:44,680 [wrapper] ==== wrapper stdout END ====
[2026-03-13 19:07:44] 2026-03-13 19:07:44,688 [wrapper] ==== wrapper stderr END ====
[2026-03-13 19:07:44]  *** Error codes and diagnostics ***
[2026-03-13 19:07:44]     "exeErrorCode": 0,
[2026-03-13 19:07:44]     "exeErrorDiag": "",
[2026-03-13 19:07:44]     "pilotErrorCode": 0,
[2026-03-13 19:07:44]     "pilotErrorDiag": "",
[2026-03-13 19:07:44]  *** Listing of results directory ***
[2026-03-13 19:07:44] total 615620
[2026-03-13 19:07:44] -rw-r--r-- 1 boinc boinc    584627 Mar  8 11:33 pilot3.tar.gz
[2026-03-13 19:07:44] -rw-r--r-- 1 boinc boinc      5111 Mar  8 12:14 queuedata.json
[2026-03-13 19:07:44] -rwx------ 1 boinc boinc     36322 Mar  8 12:14 runpilot2-wrapper.sh
[2026-03-13 19:07:44] -rw-rw-r-- 1 boinc boinc       100 Mar 13 17:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 19:07:44] -rwxr-xr-x 1 boinc boinc      7986 Mar 13 17:05 run_atlas
[2026-03-13 19:07:44] -rw-rw-r-- 1 boinc boinc       105 Mar 13 17:05 job.xml
[2026-03-13 19:07:44] -rw-r--r-- 2 boinc boinc 439565758 Mar 13 17:05 EVNT.46701403._001292.pool.root.1
[2026-03-13 19:07:44] drwxrwx--x 2 boinc boinc      4096 Mar 13 17:05 shared
[2026-03-13 19:07:44] -rw-r--r-- 2 boinc boinc    597966 Mar 13 17:05 input.tar.gz
[2026-03-13 19:07:44] -rw-r--r-- 2 boinc boinc     15845 Mar 13 17:05 start_atlas.sh
[2026-03-13 19:07:44] -rw-rw-r-- 1 boinc boinc      6555 Mar 13 17:05 init_data.xml
[2026-03-13 19:07:44] -rw-rw-r-- 1 boinc boinc         0 Mar 13 17:05 boinc_setup_complete
[2026-03-13 19:07:44] -rw-rw-r-- 1 boinc boinc         0 Mar 13 17:05 boinc_lockfile
[2026-03-13 19:07:44] -rw-rw-r-- 1 boinc boinc      2562 Mar 13 17:05 pandaJob.out
[2026-03-13 19:07:44] -rw------- 1 boinc boinc   1006597 Mar 13 17:05 agis_schedconf.cvmfs.json
[2026-03-13 19:07:44] -rw------- 1 boinc boinc   1511579 Mar 13 17:05 agis_ddmendpoints.agis.ALL.json
[2026-03-13 19:07:44] -rw------- 1 boinc boinc       416 Mar 13 17:06 workernode_map.json
[2026-03-13 19:07:44] drwx------ 5 boinc boinc      4096 Mar 13 17:06 pilot3
[2026-03-13 19:07:44] -rw------- 1 boinc boinc 183999762 Mar 13 19:06 HITS.48955010._014579.pool.root.1
[2026-03-13 19:07:44] -rw-rw-r-- 1 boinc boinc       531 Mar 13 19:06 boinc_task_state.xml
[2026-03-13 19:07:44] -rw------- 1 boinc boinc        95 Mar 13 19:06 pilot_heartbeat.json
[2026-03-13 19:07:44] -rw------- 1 boinc boinc      1024 Mar 13 19:07 memory_monitor_summary.json
[2026-03-13 19:07:44] -rw------- 1 boinc boinc    418921 Mar 13 19:07 log.48955010._014579.job.log.tgz.1
[2026-03-13 19:07:44] -rw------- 1 boinc boinc      6273 Mar 13 19:07 heartbeat.json
[2026-03-13 19:07:44] -rw-rw-r-- 1 boinc boinc        27 Mar 13 19:07 wrapper_checkpoint.txt
[2026-03-13 19:07:44] -rw-rw-r-- 1 boinc boinc      8192 Mar 13 19:07 boinc_mmap_file
[2026-03-13 19:07:44] -rw------- 1 boinc boinc       894 Mar 13 19:07 pilotlog.txt
[2026-03-13 19:07:44] -rw------- 1 boinc boinc   1028539 Mar 13 19:07 log.48955010._014579.job.log.1
[2026-03-13 19:07:44] -rw------- 1 boinc boinc       357 Mar 13 19:07 output.list
[2026-03-13 19:07:44] -rw-rw-r-- 1 boinc boinc       620 Mar 13 19:07 runtime_log
[2026-03-13 19:07:44] -rw------- 1 boinc boinc   1464320 Mar 13 19:07 result.tar.gz
[2026-03-13 19:07:44] -rw-rw-r-- 1 boinc boinc      9166 Mar 13 19:07 runtime_log.err
[2026-03-13 19:07:44] -rw------- 1 boinc boinc       652 Mar 13 19:07 fl2KDmWCSJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmudWLDmjm42en.diag
[2026-03-13 19:07:44] -rw-rw-r-- 1 boinc boinc     20857 Mar 13 19:07 stderr.txt
[2026-03-13 19:07:45] HITS file was successfully produced:
[2026-03-13 19:07:45] -rw------- 1 boinc boinc 183999762 Mar 13 19:06 shared/HITS.pool.root.1
[2026-03-13 19:07:45]  *** Contents of shared directory: ***
[2026-03-13 19:07:45] total 610992
[2026-03-13 19:07:45] -rw-r--r-- 2 boinc boinc 439565758 Mar 13 17:05 ATLAS.root_0
[2026-03-13 19:07:45] -rw-r--r-- 2 boinc boinc    597966 Mar 13 17:05 input.tar.gz
[2026-03-13 19:07:45] -rw-r--r-- 2 boinc boinc     15845 Mar 13 17:05 start_atlas.sh
[2026-03-13 19:07:45] -rw------- 1 boinc boinc 183999762 Mar 13 19:06 HITS.pool.root.1
[2026-03-13 19:07:45] -rw------- 1 boinc boinc   1464320 Mar 13 19:07 result.tar.gz
19:07:46 (1738433): run_atlas exited; CPU time 44365.410804
19:07:46 (1738433): called boinc_finish(0)

</stderr_txt>
]]>

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