Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:07:58 (896395): wrapper (7.7.26015): starting
19:07:58 (896395): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 19:07:58] Arguments: --nthreads 4
[2026-03-09 19:07:58] Threads: 4
[2026-03-09 19:07:58] Checking for CVMFS
[2026-03-09 19:07:58] No cvmfs_config command found, will try listing directly
[2026-03-09 19:07:58] CVMFS is ok
[2026-03-09 19:07:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 19:07:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 19:07:58] Further information can be found at the LHC@home message board.
[2026-03-09 19:07:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 19:07:58] Checking for apptainer binary...
[2026-03-09 19:07:58] which: no apptainer in ((null))
[2026-03-09 19:07:58] apptainer is not installed, using version from CVMFS
[2026-03-09 19:07:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 19:07:58] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot44/slots/7/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2026-03-09 19:07:58] apptainer works
[2026-03-09 19:07:58] Set ATHENA_PROC_NUMBER=4
[2026-03-09 19:07:58] Set ATHENA_CORE_NUMBER=4
[2026-03-09 19:07:58] Starting ATLAS job with PandaID=7047366217
[2026-03-09 19:07:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot44/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 20:39:38]  *** The last 200 lines of the pilot log: ***
[2026-03-09 20:39:38]  is_altstaged=None
[2026-03-09 20:39:38]  is_tar=False
[2026-03-09 20:39:38]  lfn=log.48966988._023715.job.log.tgz.1
[2026-03-09 20:39:38]  mtime=0
[2026-03-09 20:39:38]  protocol_id=None
[2026-03-09 20:39:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-09 20:39:38]  replicas=None
[2026-03-09 20:39:38]  scope=mc23_13p6TeV
[2026-03-09 20:39:38]  status=None
[2026-03-09 20:39:38]  status_code=0
[2026-03-09 20:39:38]  storage_token=
[2026-03-09 20:39:38]  surl=/var/lib/boinc/var/slot44/slots/7/PanDA_Pilot-7047366217/log.48966988._023715.job.log.tgz.1
[2026-03-09 20:39:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cf/ca/log.48966988._023715.job.log.tgz.1
[2026-03-09 20:39:38]  workdir=None
[2026-03-09 20:39:38] ]
[2026-03-09 20:39:38] 2026-03-09 19:39:00,810 | INFO     | transferring file log.48966988._023715.job.log.tgz.1 from /var/lib/boinc/var/slot44/slots/7/PanDA_Pilot-7047366217/log.48966988._023715.job.log.tgz.1 to /var/lib/b
[2026-03-09 20:39:38] 2026-03-09 19:39:00,811 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot44/slots/7/PanDA_Pilot-7047366217/log.48966988._023715.job.log.tgz.1 /var/lib/boinc/var/slot44/slots/7/lo
[2026-03-09 20:39:38] 2026-03-09 19:39:00,824 | INFO     | adding to output.list: log.48966988._023715.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cf/ca/log.48966988._023715.job.log.tg
[2026-03-09 20:39:38] 2026-03-09 19:39:00,824 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-09 20:39:38] 2026-03-09 19:39:00,825 | INFO     | summary of transferred files:
[2026-03-09 20:39:38] 2026-03-09 19:39:00,825 | INFO     |  -- lfn=log.48966988._023715.job.log.tgz.1, status_code=0, status=transferred
[2026-03-09 20:39:38] 2026-03-09 19:39:00,825 | INFO     | stage-out finished correctly
[2026-03-09 20:39:38] 2026-03-09 19:39:01,411 | INFO     | PID=900956 has CPU usage=13.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 20:39:38] 2026-03-09 19:39:01,411 | INFO     | .. there are 55 such processes running
[2026-03-09 20:39:38] 2026-03-09 19:39:02,411 | INFO     | time since job start (5456s) is within the limit (349056.0s)
[2026-03-09 20:39:38] 2026-03-09 19:39:02,772 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-09 20:39:38] 2026-03-09 19:39:02,973 | INFO     | monitor loop #399: job 0:7047366217 is in state 'finished'
[2026-03-09 20:39:38] 2026-03-09 19:39:02,973 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-09 20:39:38] 2026-03-09 19:39:04,417 | INFO     | time since job start (5458s) is within the limit (349056.0s)
[2026-03-09 20:39:38] 2026-03-09 19:39:04,910 | INFO     | job 7047366217 has state=finished
[2026-03-09 20:39:38] 2026-03-09 19:39:04,910 | INFO     | preparing for final server update for job 7047366217 in state='finished'
[2026-03-09 20:39:38] 2026-03-09 19:39:04,910 | INFO     | reading metadata from: /var/lib/boinc/var/slot44/slots/7/PanDA_Pilot-7047366217/jobReport.json
[2026-03-09 20:39:38] 2026-03-09 19:39:04,912 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot44/slots/7/workernode_map.json
[2026-03-09 20:39:38] 2026-03-09 19:39:04,912 | INFO     | this job has now completed (state=finished)
[2026-03-09 20:39:38] 2026-03-09 19:39:04,912 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 20:39:38] 2026-03-09 19:39:04,912 | INFO     | log transfer has been attempted: DONE
[2026-03-09 20:39:38] 2026-03-09 19:39:04,912 | INFO     | job 7047366217 has finished - writing final server update
[2026-03-09 20:39:38] 2026-03-09 19:39:04,912 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3269701/.job.ad'
[2026-03-09 20:39:38] 2026-03-09 19:39:04,912 | INFO     | total number of processed events: 400 (read)
[2026-03-09 20:39:38] 2026-03-09 19:39:04,930 | INFO     | using path: /var/lib/boinc/var/slot44/slots/7/PanDA_Pilot-7047366217/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 20:39:38] 2026-03-09 19:39:04,930 | INFO     | extracted standard info from prmon json
[2026-03-09 20:39:38] 2026-03-09 19:39:04,930 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 20:39:38] 2026-03-09 19:39:04,930 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 20:39:38] 2026-03-09 19:39:04,930 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 20:39:38] 2026-03-09 19:39:04,930 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 20:39:38] 2026-03-09 19:39:04,931 | INFO     | fitting pss+swap vs Time
[2026-03-09 20:39:38] 2026-03-09 19:39:04,932 | INFO     | sum of square deviations: 177275882.0
[2026-03-09 20:39:38] 2026-03-09 19:39:04,932 | INFO     | sum of deviations: 985308173.0
[2026-03-09 20:39:38] 2026-03-09 19:39:04,932 | INFO     | mean x: 1773082508.0
[2026-03-09 20:39:38] 2026-03-09 19:39:04,932 | INFO     | mean y: 2333013.2168674697
[2026-03-09 20:39:38] 2026-03-09 19:39:04,932 | INFO     | intersect: -9852547790.79311
[2026-03-09 20:39:38] 2026-03-09 19:39:04,932 | INFO     | chi2: 0.0001352602132266073
[2026-03-09 20:39:38] 2026-03-09 19:39:04,932 | INFO     | current memory leak: 5.56 B/s (using 83 data points, chi2=0.00)
[2026-03-09 20:39:38] 2026-03-09 19:39:04,932 | INFO     | could have reported an average CPU frequency of 3684 MHz (7 samples)
[2026-03-09 20:39:38] 2026-03-09 19:39:04,932 | INFO     | ..............................
[2026-03-09 20:39:38] 2026-03-09 19:39:04,932 | INFO     | . Timing measurements:
[2026-03-09 20:39:38] 2026-03-09 19:39:04,932 | INFO     | . get job = 0 s
[2026-03-09 20:39:38] 2026-03-09 19:39:04,932 | INFO     | . initial setup = 3 s
[2026-03-09 20:39:38] 2026-03-09 19:39:04,932 | INFO     | . payload setup = 2 s
[2026-03-09 20:39:38] 2026-03-09 19:39:04,932 | INFO     | . stage-in = 0 s
[2026-03-09 20:39:38] 2026-03-09 19:39:04,932 | INFO     | . payload execution = 5436 s
[2026-03-09 20:39:38] 2026-03-09 19:39:04,932 | INFO     | . stage-out = 0 s
[2026-03-09 20:39:38] 2026-03-09 19:39:04,932 | INFO     | . log creation = 0 s
[2026-03-09 20:39:38] 2026-03-09 19:39:04,933 | INFO     | ..............................
[2026-03-09 20:39:38] 2026-03-09 19:39:04,977 | INFO     | 
[2026-03-09 20:39:38] 2026-03-09 19:39:04,978 | INFO     | job summary report
[2026-03-09 20:39:38] 2026-03-09 19:39:04,978 | INFO     | --------------------------------------------------
[2026-03-09 20:39:38] 2026-03-09 19:39:04,978 | INFO     | PanDA job id: 7047366217
[2026-03-09 20:39:38] 2026-03-09 19:39:04,978 | INFO     | task id: 48966988
[2026-03-09 20:39:38] 2026-03-09 19:39:04,978 | INFO     | errors: (none)
[2026-03-09 20:39:38] 2026-03-09 19:39:04,978 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 20:39:38] 2026-03-09 19:39:04,978 | INFO     | pilot state: finished 
[2026-03-09 20:39:38] 2026-03-09 19:39:04,978 | INFO     | transexitcode: 0
[2026-03-09 20:39:38] 2026-03-09 19:39:04,978 | INFO     | exeerrorcode: 0
[2026-03-09 20:39:38] 2026-03-09 19:39:04,978 | INFO     | exeerrordiag: 
[2026-03-09 20:39:38] 2026-03-09 19:39:04,978 | INFO     | exitcode: 0
[2026-03-09 20:39:38] 2026-03-09 19:39:04,978 | INFO     | exitmsg: OK
[2026-03-09 20:39:38] 2026-03-09 19:39:04,978 | INFO     | cpuconsumptiontime: 21074 s
[2026-03-09 20:39:38] 2026-03-09 19:39:04,978 | INFO     | nevents: 400
[2026-03-09 20:39:38] 2026-03-09 19:39:04,978 | INFO     | neventsw: 0
[2026-03-09 20:39:38] 2026-03-09 19:39:04,978 | INFO     | pid: 907536
[2026-03-09 20:39:38] 2026-03-09 19:39:04,978 | INFO     | pgrp: 907536
[2026-03-09 20:39:38] 2026-03-09 19:39:04,978 | INFO     | corecount: 4
[2026-03-09 20:39:38] 2026-03-09 19:39:04,978 | INFO     | event service: False
[2026-03-09 20:39:38] 2026-03-09 19:39:04,978 | INFO     | sizes: {0: 2280282, 11: 2280282, 5443: 2306902, 5444: 2315922, 5446: 2315978, 5448: 2316172}
[2026-03-09 20:39:38] 2026-03-09 19:39:04,978 | INFO     | --------------------------------------------------
[2026-03-09 20:39:38] 2026-03-09 19:39:04,978 | INFO     | 
[2026-03-09 20:39:38] 2026-03-09 19:39:04,978 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot44/slots/7
[2026-03-09 20:39:38] 2026-03-09 19:39:04,995 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 20:39:38] 2026-03-09 19:39:04,995 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 20:39:38] 2026-03-09 19:39:04,995 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 20:39:38] 2026-03-09 19:39:04,995 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 20:39:38] 2026-03-09 19:39:04,995 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 20:39:38] 2026-03-09 19:39:04,995 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 20:39:38] 2026-03-09 19:39:04,995 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 20:39:38] 2026-03-09 19:39:04,995 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 20:39:38] 2026-03-09 19:39:04,995 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 20:39:38] 2026-03-09 19:39:04,995 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 20:39:38] 2026-03-09 19:39:04,995 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 20:39:38] 2026-03-09 19:39:04,995 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 20:39:38] 2026-03-09 19:39:04,995 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 20:39:38] 2026-03-09 19:39:04,995 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 20:39:38] 2026-03-09 19:39:04,995 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 20:39:38] 2026-03-09 19:39:04,995 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 20:39:38] 2026-03-09 19:39:04,995 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 20:39:38] 2026-03-09 19:39:04,995 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 20:39:38] 2026-03-09 19:39:04,995 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 20:39:38] 2026-03-09 19:39:04,995 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 20:39:38] 2026-03-09 19:39:04,995 | INFO     | job 7047366217 has completed (purged errors)
[2026-03-09 20:39:38] 2026-03-09 19:39:04,996 | INFO     | overall cleanup function is called
[2026-03-09 20:39:38] 2026-03-09 19:39:06,002 | INFO     | --- collectZombieJob: --- 10, [907536]
[2026-03-09 20:39:38] 2026-03-09 19:39:06,002 | INFO     | zombie collector waiting for pid 907536
[2026-03-09 20:39:38] 2026-03-09 19:39:06,002 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 20:39:38] 2026-03-09 19:39:06,002 | INFO     | collected zombie processes
[2026-03-09 20:39:38] 2026-03-09 19:39:06,002 | INFO     | will attempt to kill all subprocesses of pid=907536
[2026-03-09 20:39:38] 2026-03-09 19:39:06,389 | INFO     | process IDs to be killed: [907536] (in reverse order)
[2026-03-09 20:39:38] 2026-03-09 19:39:06,577 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 20:39:38] 2026-03-09 19:39:06,578 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 20:39:38] 2026-03-09 19:39:06,601 | INFO     | did not find any defunct processes belonging to 907536
[2026-03-09 20:39:38] 2026-03-09 19:39:06,624 | INFO     | did not find any defunct processes belonging to 907536
[2026-03-09 20:39:38] 2026-03-09 19:39:06,624 | INFO     | ready for new job
[2026-03-09 20:39:38] 2026-03-09 19:39:06,625 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 20:39:38] 2026-03-09 19:39:06,626 | INFO     | **************************************
[2026-03-09 20:39:38] 2026-03-09 19:39:06,626 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 20:39:38] 2026-03-09 19:39:06,626 | INFO     | **************************************
[2026-03-09 20:39:38] 2026-03-09 19:39:06,626 | INFO     | 
[2026-03-09 20:39:38] 2026-03-09 19:39:06,631 | INFO     | architecture information:
[2026-03-09 20:39:38] 2026-03-09 19:39:06,632 | INFO     | executing command: cat /etc/os-release
[2026-03-09 20:39:38] 2026-03-09 19:39:06,645 | INFO     | cat /etc/os-release:
[2026-03-09 20:39:38] NAME="CentOS Linux"
[2026-03-09 20:39:38] VERSION="7 (Core)"
[2026-03-09 20:39:38] ID="centos"
[2026-03-09 20:39:38] ID_LIKE="rhel fedora"
[2026-03-09 20:39:38] VERSION_ID="7"
[2026-03-09 20:39:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 20:39:38] ANSI_COLOR="0;31"
[2026-03-09 20:39:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 20:39:38] HOME_URL="https://www.centos.org/"
[2026-03-09 20:39:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 20:39:38] 
[2026-03-09 20:39:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 20:39:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 20:39:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 20:39:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 20:39:38] 
[2026-03-09 20:39:38] 2026-03-09 19:39:06,646 | INFO     | **************************************
[2026-03-09 20:39:38] 2026-03-09 19:39:07,148 | INFO     | executing command: df -mP /var/lib/boinc/var/slot44/slots/7
[2026-03-09 20:39:38] 2026-03-09 19:39:07,164 | INFO     | sufficient remaining disk space (21336424448 B)
[2026-03-09 20:39:38] 2026-03-09 19:39:07,164 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 20:39:38] 2026-03-09 19:39:07,164 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 20:39:38] 2026-03-09 19:39:07,164 | INFO     | update_server=False
[2026-03-09 20:39:38] 2026-03-09 19:39:07,164 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 20:39:38] 2026-03-09 19:39:07,164 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 20:39:38] 2026-03-09 19:39:07,164 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 20:39:38] 2026-03-09 19:39:07,165 | INFO     | aborting loop
[2026-03-09 20:39:38] 2026-03-09 19:39:07,319 | INFO     | all data control threads have been joined
[2026-03-09 20:39:38] 2026-03-09 19:39:07,401 | INFO     | all job control threads have been joined
[2026-03-09 20:39:38] 2026-03-09 19:39:08,169 | INFO     | [job] retrieve thread has finished
[2026-03-09 20:39:38] 2026-03-09 19:39:08,170 | INFO     | all payload control threads have been joined
[2026-03-09 20:39:38] 2026-03-09 19:39:08,170 | INFO     | [job] job monitor thread has finished
[2026-03-09 20:39:38] 2026-03-09 19:39:08,324 | INFO     | [data] control thread has finished
[2026-03-09 20:39:38] 2026-03-09 19:39:08,407 | INFO     | [job] control thread has finished
[2026-03-09 20:39:38] 2026-03-09 19:39:08,630 | INFO     | [payload] failed_post thread has finished
[2026-03-09 20:39:38] 2026-03-09 19:39:08,640 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 20:39:38] 2026-03-09 19:39:08,640 | INFO     | [job] validate thread has finished
[2026-03-09 20:39:38] 2026-03-09 19:39:08,661 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 20:39:38] 2026-03-09 19:39:08,758 | INFO     | [data] copytool_in thread has finished
[2026-03-09 20:39:38] 2026-03-09 19:39:08,758 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 20:39:38] 2026-03-09 19:39:08,822 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 20:39:38] 2026-03-09 19:39:09,165 | INFO     | [data] copytool_out thread has finished
[2026-03-09 20:39:38] 2026-03-09 19:39:09,176 | INFO     | [payload] control thread has finished
[2026-03-09 20:39:38] 2026-03-09 19:39:09,208 | INFO     | [payload] validate_post thread has finished
[2026-03-09 20:39:38] 2026-03-09 19:39:09,987 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 20:39:38] 2026-03-09 19:39:10,992 | INFO     | [job] queue monitor thread has finished
[2026-03-09 20:39:38] 2026-03-09 19:39:12,828 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 20:39:38] 2026-03-09 19:39:14,590 | INFO     | [monitor] cgroup control has ended
[2026-03-09 20:39:38] 2026-03-09 19:39:17,702 | INFO     | job.realtimelogging is not enabled
[2026-03-09 20:39:38] 2026-03-09 19:39:18,707 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 20:39:38] 2026-03-09 19:39:20,527 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22492892391232)>', '<ExcThread(monitor, started 22492656977664)>']
[2026-03-09 20:39:38] 2026-03-09 19:39:25,552 | INFO     | all workflow threads have been joined
[2026-03-09 20:39:38] 2026-03-09 19:39:25,552 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 20:39:38] 2026-03-09 19:39:25,552 | INFO     | traces error code: 0
[2026-03-09 20:39:38] 2026-03-09 19:39:25,552 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 20:39:38] 2026-03-09 19:39:37,938 | INFO     | PID=900956 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-09 20:39:38] 2026-03-09 19:39:37,939 | INFO     | .. there are 55 such processes running
[2026-03-09 20:39:38] 2026-03-09 19:39:37,939 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 20:39:38] 2026-03-09 19:39:37,939 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 20:39:38] 2026-03-09 19:39:37,939 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 20:39:38] 2026-03-09 19:39:37,939 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 20:39:38] 2026-03-09 19:39:37,939 | INFO     | [monitor] control thread has ended
[2026-03-09 20:39:38] 2026-03-09 19:39:38,044 [wrapper] ==== pilot stdout END ====
[2026-03-09 20:39:38] 2026-03-09 19:39:38,046 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 20:39:38] 2026-03-09 19:39:38,048 [wrapper] pilotpid: 900956
[2026-03-09 20:39:38] 2026-03-09 19:39:38,050 [wrapper] Pilot exit status: 0
[2026-03-09 20:39:38] 2026-03-09 19:39:38,057 [wrapper] pandaids: 7047366217
[2026-03-09 20:39:38] 2026-03-09 19:39:38,161 [wrapper] cleanup supervisor_pilot 1922667 900957
[2026-03-09 20:39:38] 2026-03-09 19:39:38,163 [wrapper] Test setup, not cleaning
[2026-03-09 20:39:38] 2026-03-09 19:39:38,165 [wrapper] apfmon messages muted
[2026-03-09 20:39:38] 2026-03-09 19:39:38,167 [wrapper] ==== wrapper stdout END ====
[2026-03-09 20:39:38] 2026-03-09 19:39:38,169 [wrapper] ==== wrapper stderr END ====
[2026-03-09 20:39:38]  *** Error codes and diagnostics ***
[2026-03-09 20:39:38]     "exeErrorCode": 0,
[2026-03-09 20:39:38]     "exeErrorDiag": "",
[2026-03-09 20:39:38]     "pilotErrorCode": 0,
[2026-03-09 20:39:38]     "pilotErrorDiag": "",
[2026-03-09 20:39:38]  *** Listing of results directory ***
[2026-03-09 20:39:38] total 412084
[2026-03-09 20:39:38] -rw-r--r--. 1 boinc boinc    584627 Mar  9 14:02 pilot3.tar.gz
[2026-03-09 20:39:38] -rwx------. 1 boinc boinc     36322 Mar  9 15:06 runpilot2-wrapper.sh
[2026-03-09 20:39:38] -rw-r--r--. 1 boinc boinc      5111 Mar  9 15:06 queuedata.json
[2026-03-09 20:39:38] -rw-r--r--. 1 boinc boinc       100 Mar  9 19:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 20:39:38] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 19:07 run_atlas
[2026-03-09 20:39:38] -rw-r--r--. 1 boinc boinc       105 Mar  9 19:07 job.xml
[2026-03-09 20:39:38] -rw-r--r--. 2 boinc boinc     15845 Mar  9 19:07 start_atlas.sh
[2026-03-09 20:39:38] drwxrwx--x. 2 boinc boinc      4096 Mar  9 19:07 shared
[2026-03-09 20:39:38] -rw-r--r--. 2 boinc boinc    597969 Mar  9 19:07 input.tar.gz
[2026-03-09 20:39:38] -rw-r--r--. 1 boinc boinc      6705 Mar  9 19:07 init_data.xml
[2026-03-09 20:39:38] -rw-r--r--. 2 boinc boinc 212770914 Mar  9 19:07 EVNT.48966985._000923.pool.root.1
[2026-03-09 20:39:38] -rw-r--r--. 1 boinc boinc         0 Mar  9 19:07 boinc_lockfile
[2026-03-09 20:39:38] -rw-r--r--. 1 boinc boinc      2592 Mar  9 19:07 pandaJob.out
[2026-03-09 20:39:38] -rw-------. 1 boinc boinc   1002716 Mar  9 19:08 agis_schedconf.cvmfs.json
[2026-03-09 20:39:38] -rw-------. 1 boinc boinc   1511578 Mar  9 19:08 agis_ddmendpoints.agis.ALL.json
[2026-03-09 20:39:38] -rw-------. 1 boinc boinc       443 Mar  9 19:08 workernode_map.json
[2026-03-09 20:39:38] drwx------. 5 boinc boinc      4096 Mar  9 19:08 pilot3
[2026-03-09 20:39:38] -rw-------. 1 boinc boinc 203096839 Mar  9 20:38 HITS.48966988._023715.pool.root.1
[2026-03-09 20:39:38] -rw-r--r--. 1 boinc boinc       530 Mar  9 20:38 boinc_task_state.xml
[2026-03-09 20:39:38] -rw-------. 1 boinc boinc      1027 Mar  9 20:38 memory_monitor_summary.json
[2026-03-09 20:39:38] -rw-------. 1 boinc boinc    290275 Mar  9 20:39 log.48966988._023715.job.log.tgz.1
[2026-03-09 20:39:38] -rw-------. 1 boinc boinc        95 Mar  9 20:39 pilot_heartbeat.json
[2026-03-09 20:39:38] -rw-------. 1 boinc boinc      6350 Mar  9 20:39 heartbeat.json
[2026-03-09 20:39:38] -rw-r--r--. 1 boinc boinc        27 Mar  9 20:39 wrapper_checkpoint.txt
[2026-03-09 20:39:38] -rw-r--r--. 1 boinc boinc      8192 Mar  9 20:39 boinc_mmap_file
[2026-03-09 20:39:38] -rw-------. 1 boinc boinc       822 Mar  9 20:39 pilotlog.txt
[2026-03-09 20:39:38] -rw-------. 1 boinc boinc    797987 Mar  9 20:39 log.48966988._023715.job.log.1
[2026-03-09 20:39:38] -rw-------. 1 boinc boinc       357 Mar  9 20:39 output.list
[2026-03-09 20:39:38] -rw-r--r--. 1 boinc boinc       620 Mar  9 20:39 runtime_log
[2026-03-09 20:39:38] -rw-------. 1 boinc boinc   1105920 Mar  9 20:39 result.tar.gz
[2026-03-09 20:39:38] -rw-r--r--. 1 boinc boinc      9204 Mar  9 20:39 runtime_log.err
[2026-03-09 20:39:38] -rw-------. 1 boinc boinc       662 Mar  9 20:39 I6YNDmtQqJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmyjcLDm1w73fm.diag
[2026-03-09 20:39:38] -rw-r--r--. 1 boinc boinc     21392 Mar  9 20:39 stderr.txt
[2026-03-09 20:39:38] HITS file was successfully produced:
[2026-03-09 20:39:38] -rw-------. 1 boinc boinc 203096839 Mar  9 20:38 shared/HITS.pool.root.1
[2026-03-09 20:39:38]  *** Contents of shared directory: ***
[2026-03-09 20:39:38] total 407816
[2026-03-09 20:39:38] -rw-r--r--. 2 boinc boinc     15845 Mar  9 19:07 start_atlas.sh
[2026-03-09 20:39:38] -rw-r--r--. 2 boinc boinc    597969 Mar  9 19:07 input.tar.gz
[2026-03-09 20:39:38] -rw-r--r--. 2 boinc boinc 212770914 Mar  9 19:07 ATLAS.root_0
[2026-03-09 20:39:38] -rw-------. 1 boinc boinc 203096839 Mar  9 20:38 HITS.pool.root.1
[2026-03-09 20:39:38] -rw-------. 1 boinc boinc   1105920 Mar  9 20:39 result.tar.gz
20:39:39 (896395): run_atlas exited; CPU time 21280.450534
20:39:39 (896395): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN