Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:35:43 (13836): wrapper (7.7.26015): starting
02:35:43 (13836): wrapper: running run_atlas (--nthreads 8)
[2026-03-10 02:35:43] Arguments: --nthreads 8
[2026-03-10 02:35:43] Threads: 8
[2026-03-10 02:35:43] Checking for CVMFS
[2026-03-10 02:35:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 02:35:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 02:35:49] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 02:35:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 02:35:50] 2.11.2.0 4684 121163 133648 157097 0 53 14575082 25165825 4784 130560 155 39278401 99.847 23564173 863 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-10 02:35:50] CVMFS is ok
[2026-03-10 02:35:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 02:35:50] Checking for apptainer binary...
[2026-03-10 02:35:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 02:35:50] Running /usr/bin/apptainer --version
[2026-03-10 02:35:50] apptainer version 1.3.2-1.el7
[2026-03-10 02:35:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 02:35:56] cg-vwn471.simple-grid.lan
[2026-03-10 02:35:56] apptainer works
[2026-03-10 02:35:56] Set ATHENA_PROC_NUMBER=8
[2026-03-10 02:35:56] Set ATHENA_CORE_NUMBER=8
[2026-03-10 02:35:56] Starting ATLAS job with PandaID=7047366305
[2026-03-10 02:35:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 07:22:57]  *** The last 200 lines of the pilot log: ***
[2026-03-10 07:22:57] 2026-03-10 06:22:12,338 | INFO     | total number of processed events: 400 (read)
[2026-03-10 07:22:57] 2026-03-10 06:22:12,340 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-7047366305/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 07:22:57] 2026-03-10 06:22:12,340 | INFO     | extracted standard info from prmon json
[2026-03-10 07:22:57] 2026-03-10 06:22:12,341 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 07:22:57] 2026-03-10 06:22:12,341 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 07:22:57] 2026-03-10 06:22:12,341 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 07:22:57] 2026-03-10 06:22:12,341 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 07:22:57] 2026-03-10 06:22:12,346 | INFO     | fitting pss+swap vs Time
[2026-03-10 07:22:57] 2026-03-10 06:22:12,347 | INFO     | sum of square deviations: 6309000152.0
[2026-03-10 07:22:57] 2026-03-10 06:22:12,349 | INFO     | sum of deviations: 69138533013.99998
[2026-03-10 07:22:57] 2026-03-10 06:22:12,350 | INFO     | mean x: 1773115407.0
[2026-03-10 07:22:57] 2026-03-10 06:22:12,350 | INFO     | mean y: 2449761.4835164836
[2026-03-10 07:22:57] 2026-03-10 06:22:12,350 | INFO     | intersect: -19428616199.996826
[2026-03-10 07:22:57] 2026-03-10 06:22:12,350 | INFO     | chi2: 5.619361603267269
[2026-03-10 07:22:57] 2026-03-10 06:22:12,351 | INFO     | sum of square deviations: 5968658887.0
[2026-03-10 07:22:57] 2026-03-10 06:22:12,354 | INFO     | sum of deviations: 85614101063.49998
[2026-03-10 07:22:57] 2026-03-10 06:22:12,354 | INFO     | mean x: 1773115254.5
[2026-03-10 07:22:57] 2026-03-10 06:22:12,354 | INFO     | mean y: 2457024.354477612
[2026-03-10 07:22:57] 2026-03-10 06:22:12,354 | INFO     | intersect: -25431006584.469196
[2026-03-10 07:22:57] 2026-03-10 06:22:12,355 | INFO     | chi2: 4.88752974720668
[2026-03-10 07:22:57] 2026-03-10 06:22:12,355 | INFO     | current chi2=4.88752974720668 (change=13.023398523331883 %)
[2026-03-10 07:22:57] 2026-03-10 06:22:12,355 | INFO     | right removable region: 267
[2026-03-10 07:22:57] 2026-03-10 06:22:12,355 | INFO     | sum of square deviations: 5968658887.0
[2026-03-10 07:22:57] 2026-03-10 06:22:12,373 | INFO     | sum of deviations: -20468242560.0
[2026-03-10 07:22:57] 2026-03-10 06:22:12,373 | INFO     | mean x: 1773115559.5
[2026-03-10 07:22:57] 2026-03-10 06:22:12,373 | INFO     | mean y: 2489866.4925373136
[2026-03-10 07:22:57] 2026-03-10 06:22:12,373 | INFO     | intersect: 6083011478.7768135
[2026-03-10 07:22:57] 2026-03-10 06:22:12,374 | INFO     | chi2: 1.4286209026308478
[2026-03-10 07:22:57] 2026-03-10 06:22:12,374 | INFO     | current chi2=1.4286209026308478 (change=74.57681132674921 %)
[2026-03-10 07:22:57] 2026-03-10 06:22:12,374 | INFO     | sum of square deviations: 5640782972.0
[2026-03-10 07:22:57] 2026-03-10 06:22:12,377 | INFO     | sum of deviations: -42621816300.0
[2026-03-10 07:22:57] 2026-03-10 06:22:12,377 | INFO     | mean x: 1773115712.0
[2026-03-10 07:22:57] 2026-03-10 06:22:12,377 | INFO     | mean y: 2500078.3764258553
[2026-03-10 07:22:57] 2026-03-10 06:22:12,377 | INFO     | intersect: 13400181309.978987
[2026-03-10 07:22:57] 2026-03-10 06:22:12,377 | INFO     | chi2: 0.9463987431470258
[2026-03-10 07:22:57] 2026-03-10 06:22:12,377 | INFO     | current chi2=0.9463987431470258 (change=33.754382187450545 %)
[2026-03-10 07:22:57] 2026-03-10 06:22:12,378 | INFO     | sum of square deviations: 5325139844.5
[2026-03-10 07:22:57] 2026-03-10 06:22:12,380 | INFO     | sum of deviations: -39245149252.5
[2026-03-10 07:22:57] 2026-03-10 06:22:12,380 | INFO     | mean x: 1773115864.5
[2026-03-10 07:22:57] 2026-03-10 06:22:12,380 | INFO     | mean y: 2498421.4534883723
[2026-03-10 07:22:57] 2026-03-10 06:22:12,380 | INFO     | intersect: 13069985619.212107
[2026-03-10 07:22:57] 2026-03-10 06:22:12,381 | INFO     | chi2: 0.9308368013696241
[2026-03-10 07:22:57] 2026-03-10 06:22:12,381 | INFO     | current chi2=0.9308368013696241 (change=1.644332464522734 %)
[2026-03-10 07:22:57] 2026-03-10 06:22:12,381 | INFO     | left removable region: 30
[2026-03-10 07:22:57] 2026-03-10 06:22:12,381 | INFO     | sum of square deviations: 4127772278.0
[2026-03-10 07:22:57] 2026-03-10 06:22:12,383 | INFO     | sum of deviations: 5964324959.0
[2026-03-10 07:22:57] 2026-03-10 06:22:12,383 | INFO     | mean x: 1773116139.0
[2026-03-10 07:22:57] 2026-03-10 06:22:12,384 | INFO     | mean y: 2491879.0970464135
[2026-03-10 07:22:57] 2026-03-10 06:22:12,384 | INFO     | intersect: -2559529504.5456233
[2026-03-10 07:22:57] 2026-03-10 06:22:12,384 | INFO     | chi2: 0.013912496203278614
[2026-03-10 07:22:57] 2026-03-10 06:22:12,384 | INFO     | current memory leak: 1.44 B/s (using 237 data points, chi2=0.01)
[2026-03-10 07:22:57] 2026-03-10 06:22:12,385 | INFO     | could have reported an average CPU frequency of 2249 MHz (13 samples)
[2026-03-10 07:22:57] 2026-03-10 06:22:12,385 | INFO     | ..............................
[2026-03-10 07:22:57] 2026-03-10 06:22:12,385 | INFO     | . Timing measurements:
[2026-03-10 07:22:57] 2026-03-10 06:22:12,385 | INFO     | . get job = 0 s
[2026-03-10 07:22:57] 2026-03-10 06:22:12,385 | INFO     | . initial setup = 99 s
[2026-03-10 07:22:57] 2026-03-10 06:22:12,386 | INFO     | . payload setup = 115 s
[2026-03-10 07:22:57] 2026-03-10 06:22:12,386 | INFO     | . stage-in = 0 s
[2026-03-10 07:22:57] 2026-03-10 06:22:12,386 | INFO     | . payload execution = 16723 s
[2026-03-10 07:22:57] 2026-03-10 06:22:12,386 | INFO     | . stage-out = 3 s
[2026-03-10 07:22:57] 2026-03-10 06:22:12,386 | INFO     | . log creation = 1 s
[2026-03-10 07:22:57] 2026-03-10 06:22:12,386 | INFO     | ..............................
[2026-03-10 07:22:57] 2026-03-10 06:22:12,524 | INFO     | 
[2026-03-10 07:22:57] 2026-03-10 06:22:12,524 | INFO     | job summary report
[2026-03-10 07:22:57] 2026-03-10 06:22:12,524 | INFO     | --------------------------------------------------
[2026-03-10 07:22:57] 2026-03-10 06:22:12,524 | INFO     | PanDA job id: 7047366305
[2026-03-10 07:22:57] 2026-03-10 06:22:12,524 | INFO     | task id: 48966988
[2026-03-10 07:22:57] 2026-03-10 06:22:12,524 | INFO     | errors: (none)
[2026-03-10 07:22:57] 2026-03-10 06:22:12,524 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 07:22:57] 2026-03-10 06:22:12,525 | INFO     | pilot state: finished 
[2026-03-10 07:22:57] 2026-03-10 06:22:12,525 | INFO     | transexitcode: 0
[2026-03-10 07:22:57] 2026-03-10 06:22:12,525 | INFO     | exeerrorcode: 0
[2026-03-10 07:22:57] 2026-03-10 06:22:12,525 | INFO     | exeerrordiag: 
[2026-03-10 07:22:57] 2026-03-10 06:22:12,525 | INFO     | exitcode: 0
[2026-03-10 07:22:57] 2026-03-10 06:22:12,525 | INFO     | exitmsg: OK
[2026-03-10 07:22:57] 2026-03-10 06:22:12,525 | INFO     | cpuconsumptiontime: 62184 s
[2026-03-10 07:22:57] 2026-03-10 06:22:12,525 | INFO     | nevents: 400
[2026-03-10 07:22:57] 2026-03-10 06:22:12,525 | INFO     | neventsw: 0
[2026-03-10 07:22:57] 2026-03-10 06:22:12,525 | INFO     | pid: 22441
[2026-03-10 07:22:57] 2026-03-10 06:22:12,526 | INFO     | pgrp: 22441
[2026-03-10 07:22:57] 2026-03-10 06:22:12,526 | INFO     | corecount: 8
[2026-03-10 07:22:57] 2026-03-10 06:22:12,526 | INFO     | event service: False
[2026-03-10 07:22:57] 2026-03-10 06:22:12,526 | INFO     | sizes: {0: 2279181, 1: 2280240, 2: 2280328, 16843: 2312086, 16847: 2321086, 16849: 2321170, 16852: 2321492}
[2026-03-10 07:22:57] 2026-03-10 06:22:12,526 | INFO     | --------------------------------------------------
[2026-03-10 07:22:57] 2026-03-10 06:22:12,526 | INFO     | 
[2026-03-10 07:22:57] 2026-03-10 06:22:12,526 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2026-03-10 07:22:57] 2026-03-10 06:22:13,024 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 07:22:57] 2026-03-10 06:22:13,025 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 07:22:57] 2026-03-10 06:22:13,025 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 07:22:57] 2026-03-10 06:22:13,025 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 07:22:57] 2026-03-10 06:22:13,025 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 07:22:57] 2026-03-10 06:22:13,025 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 07:22:57] 2026-03-10 06:22:13,025 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 07:22:57] 2026-03-10 06:22:13,025 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 07:22:57] 2026-03-10 06:22:13,026 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 07:22:57] 2026-03-10 06:22:13,026 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 07:22:57] 2026-03-10 06:22:13,026 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 07:22:57] 2026-03-10 06:22:13,026 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 07:22:57] 2026-03-10 06:22:13,026 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 07:22:57] 2026-03-10 06:22:13,026 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 07:22:57] 2026-03-10 06:22:13,026 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 07:22:57] 2026-03-10 06:22:13,026 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 07:22:57] 2026-03-10 06:22:13,026 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 07:22:57] 2026-03-10 06:22:13,027 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 07:22:57] 2026-03-10 06:22:13,027 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 07:22:57] 2026-03-10 06:22:13,027 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 07:22:57] 2026-03-10 06:22:13,027 | INFO     | job 7047366305 has completed (purged errors)
[2026-03-10 07:22:57] 2026-03-10 06:22:13,027 | INFO     | overall cleanup function is called
[2026-03-10 07:22:57] 2026-03-10 06:22:14,036 | INFO     | --- collectZombieJob: --- 10, [22441]
[2026-03-10 07:22:57] 2026-03-10 06:22:14,036 | INFO     | zombie collector waiting for pid 22441
[2026-03-10 07:22:57] 2026-03-10 06:22:14,036 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 07:22:57] 2026-03-10 06:22:14,036 | INFO     | collected zombie processes
[2026-03-10 07:22:57] 2026-03-10 06:22:14,036 | INFO     | will attempt to kill all subprocesses of pid=22441
[2026-03-10 07:22:57] 2026-03-10 06:22:14,140 | INFO     | process IDs to be killed: [22441] (in reverse order)
[2026-03-10 07:22:57] 2026-03-10 06:22:14,806 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 07:22:57] 2026-03-10 06:22:14,807 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 07:22:57] 2026-03-10 06:22:14,809 | INFO     | did not find any defunct processes belonging to 22441
[2026-03-10 07:22:57] 2026-03-10 06:22:14,812 | INFO     | did not find any defunct processes belonging to 22441
[2026-03-10 07:22:57] 2026-03-10 06:22:14,812 | INFO     | ready for new job
[2026-03-10 07:22:57] 2026-03-10 06:22:14,813 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 07:22:57] 2026-03-10 06:22:14,815 | INFO     | **************************************
[2026-03-10 07:22:57] 2026-03-10 06:22:14,815 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 07:22:57] 2026-03-10 06:22:14,815 | INFO     | **************************************
[2026-03-10 07:22:57] 2026-03-10 06:22:14,815 | INFO     | 
[2026-03-10 07:22:57] 2026-03-10 06:22:14,816 | INFO     | pilot is running in a VM
[2026-03-10 07:22:57] 2026-03-10 06:22:14,816 | INFO     | architecture information:
[2026-03-10 07:22:57] 2026-03-10 06:22:14,824 | INFO     | executing command: cat /etc/os-release
[2026-03-10 07:22:57] 2026-03-10 06:22:15,033 | INFO     | cat /etc/os-release:
[2026-03-10 07:22:57] NAME="CentOS Linux"
[2026-03-10 07:22:57] VERSION="7 (Core)"
[2026-03-10 07:22:57] ID="centos"
[2026-03-10 07:22:57] ID_LIKE="rhel fedora"
[2026-03-10 07:22:57] VERSION_ID="7"
[2026-03-10 07:22:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 07:22:57] ANSI_COLOR="0;31"
[2026-03-10 07:22:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 07:22:57] HOME_URL="https://www.centos.org/"
[2026-03-10 07:22:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 07:22:57] 
[2026-03-10 07:22:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 07:22:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 07:22:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 07:22:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 07:22:57] 
[2026-03-10 07:22:57] 2026-03-10 06:22:15,033 | INFO     | **************************************
[2026-03-10 07:22:57] 2026-03-10 06:22:15,536 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2026-03-10 07:22:57] 2026-03-10 06:22:15,766 | INFO     | sufficient remaining disk space (496458792960 B)
[2026-03-10 07:22:57] 2026-03-10 06:22:15,766 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 07:22:57] 2026-03-10 06:22:15,766 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 07:22:57] 2026-03-10 06:22:15,766 | INFO     | update_server=False
[2026-03-10 07:22:57] 2026-03-10 06:22:15,766 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 07:22:57] 2026-03-10 06:22:15,767 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 07:22:57] 2026-03-10 06:22:15,773 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 07:22:57] 2026-03-10 06:22:16,145 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 07:22:57] 2026-03-10 06:22:16,145 | INFO     | aborting loop
[2026-03-10 07:22:57] 2026-03-10 06:22:16,722 | INFO     | all data control threads have been joined
[2026-03-10 07:22:57] 2026-03-10 06:22:16,775 | INFO     | [job] retrieve thread has finished
[2026-03-10 07:22:57] 2026-03-10 06:22:16,889 | INFO     | [job] validate thread has finished
[2026-03-10 07:22:57] 2026-03-10 06:22:16,993 | INFO     | all job control threads have been joined
[2026-03-10 07:22:57] 2026-03-10 06:22:17,010 | INFO     | all payload control threads have been joined
[2026-03-10 07:22:57] 2026-03-10 06:22:17,136 | INFO     | [payload] failed_post thread has finished
[2026-03-10 07:22:57] 2026-03-10 06:22:17,151 | INFO     | [job] job monitor thread has finished
[2026-03-10 07:22:57] 2026-03-10 06:22:17,235 | INFO     | [payload] validate_post thread has finished
[2026-03-10 07:22:57] 2026-03-10 06:22:17,417 | INFO     | [data] copytool_in thread has finished
[2026-03-10 07:22:57] 2026-03-10 06:22:17,541 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 07:22:57] 2026-03-10 06:22:17,728 | INFO     | [data] control thread has finished
[2026-03-10 07:22:57] 2026-03-10 06:22:17,773 | INFO     | [data] copytool_out thread has finished
[2026-03-10 07:22:57] 2026-03-10 06:22:17,787 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 07:22:57] 2026-03-10 06:22:17,887 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 07:22:57] 2026-03-10 06:22:17,999 | INFO     | [job] control thread has finished
[2026-03-10 07:22:57] 2026-03-10 06:22:18,016 | INFO     | [payload] control thread has finished
[2026-03-10 07:22:57] 2026-03-10 06:22:18,191 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 07:22:57] 2026-03-10 06:22:18,547 | INFO     | [job] queue monitor thread has finished
[2026-03-10 07:22:57] 2026-03-10 06:22:19,782 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 07:22:57] 2026-03-10 06:22:26,079 | INFO     | job.realtimelogging is not enabled
[2026-03-10 07:22:57] 2026-03-10 06:22:27,085 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 07:22:57] 2026-03-10 06:22:44,168 | INFO     | 16956s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-10 07:22:57] 2026-03-10 06:22:45,301 | INFO     | PID=17955 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-10 07:22:57] 2026-03-10 06:22:45,301 | INFO     | .. there are 9 such processes running
[2026-03-10 07:22:57] 2026-03-10 06:22:45,302 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 07:22:57] 2026-03-10 06:22:45,302 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 07:22:57] 2026-03-10 06:22:45,302 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 07:22:57] 2026-03-10 06:22:46,050 | INFO     | [monitor] cgroup control has ended
[2026-03-10 07:22:57] 2026-03-10 06:22:47,418 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140267540637504)>', '<ExcThread(monitor, started 140267113932544)>']
[2026-03-10 07:22:57] 2026-03-10 06:22:48,320 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 07:22:57] 2026-03-10 06:22:48,320 | INFO     | [monitor] control thread has ended
[2026-03-10 07:22:57] 2026-03-10 06:22:52,444 | INFO     | all workflow threads have been joined
[2026-03-10 07:22:57] 2026-03-10 06:22:52,444 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 07:22:57] 2026-03-10 06:22:52,444 | INFO     | traces error code: 0
[2026-03-10 07:22:57] 2026-03-10 06:22:52,444 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 07:22:57] 2026-03-10 06:22:52,742 [wrapper] ==== pilot stdout END ====
[2026-03-10 07:22:57] 2026-03-10 06:22:52,832 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 07:22:57] 2026-03-10 06:22:52,944 [wrapper] pilotpid: 17955
[2026-03-10 07:22:57] 2026-03-10 06:22:53,050 [wrapper] Pilot exit status: 0
[2026-03-10 07:22:57] 2026-03-10 06:22:53,610 [wrapper] pandaids: 7047366305
[2026-03-10 07:22:57] 2026-03-10 06:22:54,531 [wrapper] cleanup supervisor_pilot 14075 17956
[2026-03-10 07:22:57] 2026-03-10 06:22:54,581 [wrapper] Test setup, not cleaning
[2026-03-10 07:22:57] 2026-03-10 06:22:54,673 [wrapper] apfmon messages muted
[2026-03-10 07:22:57] 2026-03-10 06:22:54,728 [wrapper] ==== wrapper stdout END ====
[2026-03-10 07:22:57] 2026-03-10 06:22:54,804 [wrapper] ==== wrapper stderr END ====
[2026-03-10 07:22:57]  *** Error codes and diagnostics ***
[2026-03-10 07:22:57]     "exeErrorCode": 0,
[2026-03-10 07:22:57]     "exeErrorDiag": "",
[2026-03-10 07:22:57]     "pilotErrorCode": 0,
[2026-03-10 07:22:57]     "pilotErrorDiag": "",
[2026-03-10 07:22:57]  *** Listing of results directory ***
[2026-03-10 07:22:57] total 408860
[2026-03-10 07:22:57] -rw-r--r--. 1 boinc boinc    584627 Mar  9 14:02 pilot3.tar.gz
[2026-03-10 07:22:57] -rwx------. 1 boinc boinc     36322 Mar  9 15:06 runpilot2-wrapper.sh
[2026-03-10 07:22:57] -rw-r--r--. 1 boinc boinc      5111 Mar  9 15:06 queuedata.json
[2026-03-10 07:22:57] -rw-r--r--. 1 boinc boinc       100 Mar 10 02:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 07:22:57] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 02:35 run_atlas
[2026-03-10 07:22:57] -rw-r--r--. 1 boinc boinc       105 Mar 10 02:35 job.xml
[2026-03-10 07:22:57] -rw-r--r--. 2 boinc boinc 211180263 Mar 10 02:35 EVNT.48966985._000927.pool.root.1
[2026-03-10 07:22:57] -rw-r--r--. 2 boinc boinc    597971 Mar 10 02:35 input.tar.gz
[2026-03-10 07:22:57] -rw-r--r--. 1 boinc boinc      6392 Mar 10 02:35 init_data.xml
[2026-03-10 07:22:57] -rw-r--r--. 2 boinc boinc     15845 Mar 10 02:35 start_atlas.sh
[2026-03-10 07:22:57] drwxrwx--x. 2 boinc boinc        68 Mar 10 02:35 shared
[2026-03-10 07:22:57] -rw-r--r--. 1 boinc boinc         0 Mar 10 02:35 boinc_lockfile
[2026-03-10 07:22:57] -rw-r--r--. 1 boinc boinc      2592 Mar 10 02:35 pandaJob.out
[2026-03-10 07:22:57] -rw-------. 1 boinc boinc       415 Mar 10 02:41 workernode_map.json
[2026-03-10 07:22:57] -rw-------. 1 boinc boinc   1002338 Mar 10 02:41 agis_schedconf.cvmfs.json
[2026-03-10 07:22:57] drwx------. 5 boinc boinc      4096 Mar 10 02:41 pilot3
[2026-03-10 07:22:57] -rw-------. 1 boinc boinc 197879067 Mar 10 07:20 HITS.48966988._023803.pool.root.1
[2026-03-10 07:22:57] -rw-r--r--. 1 boinc boinc       530 Mar 10 07:21 boinc_task_state.xml
[2026-03-10 07:22:57] -rw-------. 1 boinc boinc        95 Mar 10 07:21 pilot_heartbeat.json
[2026-03-10 07:22:57] -rw-------. 1 boinc boinc      1018 Mar 10 07:21 memory_monitor_summary.json
[2026-03-10 07:22:57] -rw-------. 1 boinc boinc   1511578 Mar 10 07:22 agis_ddmendpoints.agis.ALL.json
[2026-03-10 07:22:57] -rw-------. 1 boinc boinc    493769 Mar 10 07:22 log.48966988._023803.job.log.tgz.1
[2026-03-10 07:22:57] -rw-------. 1 boinc boinc      6314 Mar 10 07:22 heartbeat.json
[2026-03-10 07:22:57] -rw-r--r--. 1 boinc boinc      8192 Mar 10 07:22 boinc_mmap_file
[2026-03-10 07:22:57] -rw-r--r--. 1 boinc boinc        28 Mar 10 07:22 wrapper_checkpoint.txt
[2026-03-10 07:22:57] -rw-------. 1 boinc boinc      5069 Mar 10 07:22 pilotlog.txt
[2026-03-10 07:22:57] -rw-------. 1 boinc boinc   2353481 Mar 10 07:22 log.48966988._023803.job.log.1
[2026-03-10 07:22:57] -rw-------. 1 boinc boinc       357 Mar 10 07:22 output.list
[2026-03-10 07:22:57] -rw-r--r--. 1 boinc boinc       620 Mar 10 07:22 runtime_log
[2026-03-10 07:22:57] -rw-------. 1 boinc boinc   2867200 Mar 10 07:22 result.tar.gz
[2026-03-10 07:22:57] -rw-------. 1 boinc boinc       655 Mar 10 07:22 WKbLDmkQqJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmehcLDmLmtL9n.diag
[2026-03-10 07:22:57] -rw-r--r--. 1 boinc boinc      8832 Mar 10 07:22 runtime_log.err
[2026-03-10 07:22:57] -rw-r--r--. 1 boinc boinc     20711 Mar 10 07:22 stderr.txt
[2026-03-10 07:22:57] HITS file was successfully produced:
[2026-03-10 07:22:57] -rw-------. 1 boinc boinc 197879067 Mar 10 07:20 shared/HITS.pool.root.1
[2026-03-10 07:22:57]  *** Contents of shared directory: ***
[2026-03-10 07:22:57] total 402876
[2026-03-10 07:22:57] -rw-r--r--. 2 boinc boinc 211180263 Mar 10 02:35 ATLAS.root_0
[2026-03-10 07:22:57] -rw-r--r--. 2 boinc boinc    597971 Mar 10 02:35 input.tar.gz
[2026-03-10 07:22:57] -rw-r--r--. 2 boinc boinc     15845 Mar 10 02:35 start_atlas.sh
[2026-03-10 07:22:57] -rw-------. 1 boinc boinc 197879067 Mar 10 07:20 HITS.pool.root.1
[2026-03-10 07:22:57] -rw-------. 1 boinc boinc   2867200 Mar 10 07:22 result.tar.gz
07:22:58 (13836): run_atlas exited; CPU time 62419.635817
07:22:58 (13836): called boinc_finish(0)

</stderr_txt>
]]>

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