Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:07:25 (3078400): wrapper (7.7.26015): starting
04:07:25 (3078400): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 04:07:25] Arguments: --nthreads 4
[2026-03-10 04:07:25] Threads: 4
[2026-03-10 04:07:25] Checking for CVMFS
[2026-03-10 04:07:25] No cvmfs_config command found, will try listing directly
[2026-03-10 04:07:25] CVMFS is ok
[2026-03-10 04:07:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 04:07:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 04:07:25] Further information can be found at the LHC@home message board.
[2026-03-10 04:07:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 04:07:25] Checking for apptainer binary...
[2026-03-10 04:07:25] which: no apptainer in ((null))
[2026-03-10 04:07:25] apptainer is not installed, using version from CVMFS
[2026-03-10 04:07:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 04:07:25] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot36/slots/6/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-03-10 04:07:25] apptainer works
[2026-03-10 04:07:25] Set ATHENA_PROC_NUMBER=4
[2026-03-10 04:07:25] Set ATHENA_CORE_NUMBER=4
[2026-03-10 04:07:25] Starting ATLAS job with PandaID=7047544989
[2026-03-10 04:07:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot36/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 06:03:53]  *** The last 200 lines of the pilot log: ***
[2026-03-10 06:03:53] 2026-03-10 05:03:00,169 | INFO     | total number of processed events: 400 (read)
[2026-03-10 06:03:53] 2026-03-10 05:03:00,187 | INFO     | using path: /var/lib/boinc/var/slot36/slots/6/PanDA_Pilot-7047544989/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 06:03:53] 2026-03-10 05:03:00,187 | INFO     | extracted standard info from prmon json
[2026-03-10 06:03:53] 2026-03-10 05:03:00,187 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 06:03:53] 2026-03-10 05:03:00,187 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 06:03:53] 2026-03-10 05:03:00,192 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 06:03:53] 2026-03-10 05:03:00,192 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 06:03:53] 2026-03-10 05:03:00,193 | INFO     | fitting pss+swap vs Time
[2026-03-10 06:03:53] 2026-03-10 05:03:00,193 | INFO     | sum of square deviations: 459366752.5
[2026-03-10 06:03:53] 2026-03-10 05:03:00,194 | INFO     | sum of deviations: 6228912489.500001
[2026-03-10 06:03:53] 2026-03-10 05:03:00,194 | INFO     | mean x: 1773115522.5
[2026-03-10 06:03:53] 2026-03-10 05:03:00,194 | INFO     | mean y: 2302274.850877193
[2026-03-10 06:03:53] 2026-03-10 05:03:00,194 | INFO     | intersect: -24040755615.862648
[2026-03-10 06:03:53] 2026-03-10 05:03:00,194 | INFO     | chi2: 1.9346495472541054
[2026-03-10 06:03:53] 2026-03-10 05:03:00,194 | INFO     | sum of square deviations: 401533110.0
[2026-03-10 06:03:53] 2026-03-10 05:03:00,194 | INFO     | sum of deviations: 12920634113.999998
[2026-03-10 06:03:53] 2026-03-10 05:03:00,194 | INFO     | mean x: 1773115370.0
[2026-03-10 06:03:53] 2026-03-10 05:03:00,194 | INFO     | mean y: 2319242.1743119266
[2026-03-10 06:03:53] 2026-03-10 05:03:00,194 | INFO     | intersect: -57053436228.849556
[2026-03-10 06:03:53] 2026-03-10 05:03:00,195 | INFO     | chi2: 1.1167803698109044
[2026-03-10 06:03:53] 2026-03-10 05:03:00,195 | INFO     | current chi2=1.1167803698109044 (change=42.274797448665694 %)
[2026-03-10 06:03:53] 2026-03-10 05:03:00,195 | INFO     | sum of square deviations: 348769330.0
[2026-03-10 06:03:53] 2026-03-10 05:03:00,195 | INFO     | sum of deviations: 12232875980.500002
[2026-03-10 06:03:53] 2026-03-10 05:03:00,195 | INFO     | mean x: 1773115217.5
[2026-03-10 06:03:53] 2026-03-10 05:03:00,195 | INFO     | mean y: 2317253.0096153845
[2026-03-10 06:03:53] 2026-03-10 05:03:00,195 | INFO     | intersect: -62188640176.689804
[2026-03-10 06:03:53] 2026-03-10 05:03:00,195 | INFO     | chi2: 1.1181835336430455
[2026-03-10 06:03:53] 2026-03-10 05:03:00,195 | INFO     | current chi2=1.1181835336430455 (change=-0.1256436690751105 %)
[2026-03-10 06:03:53] 2026-03-10 05:03:00,195 | INFO     | right removable region: 103
[2026-03-10 06:03:53] 2026-03-10 05:03:00,195 | INFO     | sum of square deviations: 401533110.0
[2026-03-10 06:03:53] 2026-03-10 05:03:00,196 | INFO     | sum of deviations: -4968107302.0
[2026-03-10 06:03:53] 2026-03-10 05:03:00,196 | INFO     | mean x: 1773115675.0
[2026-03-10 06:03:53] 2026-03-10 05:03:00,196 | INFO     | mean y: 2331000.9541284405
[2026-03-10 06:03:53] 2026-03-10 05:03:00,196 | INFO     | intersect: 21940818046.911953
[2026-03-10 06:03:53] 2026-03-10 05:03:00,196 | INFO     | chi2: 0.8482487440030141
[2026-03-10 06:03:53] 2026-03-10 05:03:00,196 | INFO     | current chi2=0.8482487440030141 (change=56.154914712747114 %)
[2026-03-10 06:03:53] 2026-03-10 05:03:00,196 | INFO     | sum of square deviations: 348769330.0
[2026-03-10 06:03:53] 2026-03-10 05:03:00,196 | INFO     | sum of deviations: -5149068255.0
[2026-03-10 06:03:53] 2026-03-10 05:03:00,196 | INFO     | mean x: 1773115827.5
[2026-03-10 06:03:53] 2026-03-10 05:03:00,196 | INFO     | mean y: 2331517.5576923075
[2026-03-10 06:03:53] 2026-03-10 05:03:00,196 | INFO     | intersect: 26179789322.744595
[2026-03-10 06:03:53] 2026-03-10 05:03:00,196 | INFO     | chi2: 0.8490118754596238
[2026-03-10 06:03:53] 2026-03-10 05:03:00,196 | INFO     | current chi2=0.8490118754596238 (change=-0.08996552744756618 %)
[2026-03-10 06:03:53] 2026-03-10 05:03:00,196 | INFO     | left removable region: 20
[2026-03-10 06:03:53] 2026-03-10 05:03:00,196 | INFO     | sum of square deviations: 177275882.0
[2026-03-10 06:03:53] 2026-03-10 05:03:00,197 | INFO     | sum of deviations: 663300336.0
[2026-03-10 06:03:53] 2026-03-10 05:03:00,197 | INFO     | mean x: 1773115797.0
[2026-03-10 06:03:53] 2026-03-10 05:03:00,197 | INFO     | mean y: 2353677.1807228914
[2026-03-10 06:03:53] 2026-03-10 05:03:00,197 | INFO     | intersect: -6631985357.821273
[2026-03-10 06:03:53] 2026-03-10 05:03:00,197 | INFO     | chi2: 5.83780732208438e-05
[2026-03-10 06:03:53] 2026-03-10 05:03:00,197 | INFO     | current memory leak: 3.74 B/s (using 83 data points, chi2=0.00)
[2026-03-10 06:03:53] 2026-03-10 05:03:00,197 | INFO     | could have reported an average CPU frequency of 3614 MHz (7 samples)
[2026-03-10 06:03:53] 2026-03-10 05:03:00,197 | INFO     | ..............................
[2026-03-10 06:03:53] 2026-03-10 05:03:00,197 | INFO     | . Timing measurements:
[2026-03-10 06:03:53] 2026-03-10 05:03:00,197 | INFO     | . get job = 0 s
[2026-03-10 06:03:53] 2026-03-10 05:03:00,197 | INFO     | . initial setup = 4 s
[2026-03-10 06:03:53] 2026-03-10 05:03:00,197 | INFO     | . payload setup = 4 s
[2026-03-10 06:03:53] 2026-03-10 05:03:00,197 | INFO     | . stage-in = 0 s
[2026-03-10 06:03:53] 2026-03-10 05:03:00,197 | INFO     | . payload execution = 6903 s
[2026-03-10 06:03:53] 2026-03-10 05:03:00,197 | INFO     | . stage-out = 0 s
[2026-03-10 06:03:53] 2026-03-10 05:03:00,197 | INFO     | . log creation = 0 s
[2026-03-10 06:03:53] 2026-03-10 05:03:00,197 | INFO     | ..............................
[2026-03-10 06:03:53] 2026-03-10 05:03:00,659 | INFO     | 
[2026-03-10 06:03:53] 2026-03-10 05:03:00,659 | INFO     | job summary report
[2026-03-10 06:03:53] 2026-03-10 05:03:00,659 | INFO     | --------------------------------------------------
[2026-03-10 06:03:53] 2026-03-10 05:03:00,659 | INFO     | PanDA job id: 7047544989
[2026-03-10 06:03:53] 2026-03-10 05:03:00,659 | INFO     | task id: 48998012
[2026-03-10 06:03:53] 2026-03-10 05:03:00,659 | INFO     | errors: (none)
[2026-03-10 06:03:53] 2026-03-10 05:03:00,659 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 06:03:53] 2026-03-10 05:03:00,660 | INFO     | pilot state: finished 
[2026-03-10 06:03:53] 2026-03-10 05:03:00,660 | INFO     | transexitcode: 0
[2026-03-10 06:03:53] 2026-03-10 05:03:00,660 | INFO     | exeerrorcode: 0
[2026-03-10 06:03:53] 2026-03-10 05:03:00,660 | INFO     | exeerrordiag: 
[2026-03-10 06:03:53] 2026-03-10 05:03:00,660 | INFO     | exitcode: 0
[2026-03-10 06:03:53] 2026-03-10 05:03:00,660 | INFO     | exitmsg: OK
[2026-03-10 06:03:53] 2026-03-10 05:03:00,660 | INFO     | cpuconsumptiontime: 26607 s
[2026-03-10 06:03:53] 2026-03-10 05:03:00,660 | INFO     | nevents: 400
[2026-03-10 06:03:53] 2026-03-10 05:03:00,660 | INFO     | neventsw: 0
[2026-03-10 06:03:53] 2026-03-10 05:03:00,660 | INFO     | pid: 3088667
[2026-03-10 06:03:53] 2026-03-10 05:03:00,660 | INFO     | pgrp: 3088667
[2026-03-10 06:03:53] 2026-03-10 05:03:00,660 | INFO     | corecount: 4
[2026-03-10 06:03:53] 2026-03-10 05:03:00,660 | INFO     | event service: False
[2026-03-10 06:03:53] 2026-03-10 05:03:00,660 | INFO     | sizes: {0: 2280278, 10: 2280278, 6911: 2307499, 6912: 2316574, 6913: 2316712}
[2026-03-10 06:03:53] 2026-03-10 05:03:00,660 | INFO     | --------------------------------------------------
[2026-03-10 06:03:53] 2026-03-10 05:03:00,660 | INFO     | 
[2026-03-10 06:03:53] 2026-03-10 05:03:00,660 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot36/slots/6
[2026-03-10 06:03:53] 2026-03-10 05:03:00,678 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 06:03:53] 2026-03-10 05:03:00,678 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 06:03:53] 2026-03-10 05:03:00,678 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 06:03:53] 2026-03-10 05:03:00,678 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 06:03:53] 2026-03-10 05:03:00,678 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 06:03:53] 2026-03-10 05:03:00,678 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 06:03:53] 2026-03-10 05:03:00,678 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 06:03:53] 2026-03-10 05:03:00,678 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 06:03:53] 2026-03-10 05:03:00,678 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 06:03:53] 2026-03-10 05:03:00,678 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 06:03:53] 2026-03-10 05:03:00,678 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 06:03:53] 2026-03-10 05:03:00,678 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 06:03:53] 2026-03-10 05:03:00,678 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 06:03:53] 2026-03-10 05:03:00,678 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 06:03:53] 2026-03-10 05:03:00,678 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 06:03:53] 2026-03-10 05:03:00,678 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 06:03:53] 2026-03-10 05:03:00,678 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 06:03:53] 2026-03-10 05:03:00,679 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 06:03:53] 2026-03-10 05:03:00,679 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 06:03:53] 2026-03-10 05:03:00,679 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 06:03:53] 2026-03-10 05:03:00,679 | INFO     | job 7047544989 has completed (purged errors)
[2026-03-10 06:03:53] 2026-03-10 05:03:00,679 | INFO     | overall cleanup function is called
[2026-03-10 06:03:53] 2026-03-10 05:03:01,686 | INFO     | --- collectZombieJob: --- 10, [3088667]
[2026-03-10 06:03:53] 2026-03-10 05:03:01,686 | INFO     | zombie collector waiting for pid 3088667
[2026-03-10 06:03:53] 2026-03-10 05:03:01,686 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 06:03:53] 2026-03-10 05:03:01,686 | INFO     | collected zombie processes
[2026-03-10 06:03:53] 2026-03-10 05:03:01,686 | INFO     | will attempt to kill all subprocesses of pid=3088667
[2026-03-10 06:03:53] 2026-03-10 05:03:02,110 | INFO     | process IDs to be killed: [3088667] (in reverse order)
[2026-03-10 06:03:53] 2026-03-10 05:03:02,317 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 06:03:53] 2026-03-10 05:03:02,317 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 06:03:53] 2026-03-10 05:03:02,343 | INFO     | did not find any defunct processes belonging to 3088667
[2026-03-10 06:03:53] 2026-03-10 05:03:02,367 | INFO     | did not find any defunct processes belonging to 3088667
[2026-03-10 06:03:53] 2026-03-10 05:03:02,368 | INFO     | ready for new job
[2026-03-10 06:03:53] 2026-03-10 05:03:02,368 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 06:03:53] 2026-03-10 05:03:02,369 | INFO     | **************************************
[2026-03-10 06:03:53] 2026-03-10 05:03:02,369 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 06:03:53] 2026-03-10 05:03:02,369 | INFO     | **************************************
[2026-03-10 06:03:53] 2026-03-10 05:03:02,369 | INFO     | 
[2026-03-10 06:03:53] 2026-03-10 05:03:02,376 | INFO     | architecture information:
[2026-03-10 06:03:53] 2026-03-10 05:03:02,376 | INFO     | executing command: cat /etc/os-release
[2026-03-10 06:03:53] 2026-03-10 05:03:02,392 | INFO     | cat /etc/os-release:
[2026-03-10 06:03:53] NAME="CentOS Linux"
[2026-03-10 06:03:53] VERSION="7 (Core)"
[2026-03-10 06:03:53] ID="centos"
[2026-03-10 06:03:53] ID_LIKE="rhel fedora"
[2026-03-10 06:03:53] VERSION_ID="7"
[2026-03-10 06:03:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 06:03:53] ANSI_COLOR="0;31"
[2026-03-10 06:03:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 06:03:53] HOME_URL="https://www.centos.org/"
[2026-03-10 06:03:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 06:03:53] 
[2026-03-10 06:03:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 06:03:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 06:03:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 06:03:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 06:03:53] 
[2026-03-10 06:03:53] 2026-03-10 05:03:02,392 | INFO     | **************************************
[2026-03-10 06:03:53] 2026-03-10 05:03:02,894 | INFO     | executing command: df -mP /var/lib/boinc/var/slot36/slots/6
[2026-03-10 06:03:53] 2026-03-10 05:03:02,909 | INFO     | sufficient remaining disk space (19882049536 B)
[2026-03-10 06:03:53] 2026-03-10 05:03:02,909 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 06:03:53] 2026-03-10 05:03:02,909 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 06:03:53] 2026-03-10 05:03:02,909 | INFO     | update_server=False
[2026-03-10 06:03:53] 2026-03-10 05:03:02,910 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 06:03:53] 2026-03-10 05:03:02,910 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 06:03:53] 2026-03-10 05:03:03,357 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-10 06:03:53] 2026-03-10 05:03:03,357 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-10 06:03:53] 2026-03-10 05:03:03,357 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 06:03:53] 2026-03-10 05:03:03,357 | INFO     | will abort loop
[2026-03-10 06:03:53] 2026-03-10 05:03:03,463 | INFO     | all data control threads have been joined
[2026-03-10 06:03:53] 2026-03-10 05:03:03,914 | INFO     | [job] retrieve thread has finished
[2026-03-10 06:03:53] 2026-03-10 05:03:04,095 | INFO     | all job control threads have been joined
[2026-03-10 06:03:53] 2026-03-10 05:03:04,253 | INFO     | all payload control threads have been joined
[2026-03-10 06:03:53] 2026-03-10 05:03:04,282 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 06:03:53] 2026-03-10 05:03:04,358 | INFO     | [job] job monitor thread has finished
[2026-03-10 06:03:53] 2026-03-10 05:03:04,469 | INFO     | [data] control thread has finished
[2026-03-10 06:03:53] 2026-03-10 05:03:04,637 | INFO     | [payload] validate_post thread has finished
[2026-03-10 06:03:53] 2026-03-10 05:03:04,641 | INFO     | [job] validate thread has finished
[2026-03-10 06:03:53] 2026-03-10 05:03:04,679 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 06:03:53] 2026-03-10 05:03:04,853 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 06:03:53] 2026-03-10 05:03:04,914 | INFO     | [data] copytool_out thread has finished
[2026-03-10 06:03:53] 2026-03-10 05:03:05,101 | INFO     | [job] control thread has finished
[2026-03-10 06:03:53] 2026-03-10 05:03:05,231 | INFO     | [data] copytool_in thread has finished
[2026-03-10 06:03:53] 2026-03-10 05:03:05,255 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 06:03:53] 2026-03-10 05:03:05,258 | INFO     | [payload] control thread has finished
[2026-03-10 06:03:53] 2026-03-10 05:03:05,448 | INFO     | [payload] failed_post thread has finished
[2026-03-10 06:03:53] 2026-03-10 05:03:05,518 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 06:03:53] 2026-03-10 05:03:06,261 | INFO     | [job] queue monitor thread has finished
[2026-03-10 06:03:53] 2026-03-10 05:03:09,524 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 06:03:53] 2026-03-10 05:03:13,750 | INFO     | job.realtimelogging is not enabled
[2026-03-10 06:03:53] 2026-03-10 05:03:14,755 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 06:03:53] 2026-03-10 05:03:32,939 | INFO     | PID=3082919 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 06:03:53] 2026-03-10 05:03:32,939 | INFO     | .. there are 57 such processes running
[2026-03-10 06:03:53] 2026-03-10 05:03:32,940 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 06:03:53] 2026-03-10 05:03:32,940 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 06:03:53] 2026-03-10 05:03:32,940 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 06:03:53] 2026-03-10 05:03:47,515 | INFO     | [monitor] cgroup control has ended
[2026-03-10 06:03:53] 2026-03-10 05:03:48,276 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23176208648000)>', '<ExcThread(monitor, started 23175899354880)>']
[2026-03-10 06:03:53] 2026-03-10 05:03:49,021 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 06:03:53] 2026-03-10 05:03:49,021 | INFO     | [monitor] control thread has ended
[2026-03-10 06:03:53] 2026-03-10 05:03:53,301 | INFO     | all workflow threads have been joined
[2026-03-10 06:03:53] 2026-03-10 05:03:53,301 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 06:03:53] 2026-03-10 05:03:53,301 | INFO     | traces error code: 0
[2026-03-10 06:03:53] 2026-03-10 05:03:53,301 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 06:03:53] 2026-03-10 05:03:53,481 [wrapper] ==== pilot stdout END ====
[2026-03-10 06:03:53] 2026-03-10 05:03:53,482 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 06:03:53] 2026-03-10 05:03:53,484 [wrapper] pilotpid: 3082919
[2026-03-10 06:03:53] 2026-03-10 05:03:53,485 [wrapper] Pilot exit status: 0
[2026-03-10 06:03:53] 2026-03-10 05:03:53,491 [wrapper] pandaids: 7047544989
[2026-03-10 06:03:53] 2026-03-10 05:03:53,599 [wrapper] cleanup supervisor_pilot   31215 3082920
[2026-03-10 06:03:53] 2026-03-10 05:03:53,601 [wrapper] Test setup, not cleaning
[2026-03-10 06:03:53] 2026-03-10 05:03:53,603 [wrapper] apfmon messages muted
[2026-03-10 06:03:53] 2026-03-10 05:03:53,605 [wrapper] ==== wrapper stdout END ====
[2026-03-10 06:03:53] 2026-03-10 05:03:53,606 [wrapper] ==== wrapper stderr END ====
[2026-03-10 06:03:53]  *** Error codes and diagnostics ***
[2026-03-10 06:03:53]     "exeErrorCode": 0,
[2026-03-10 06:03:53]     "exeErrorDiag": "",
[2026-03-10 06:03:53]     "pilotErrorCode": 0,
[2026-03-10 06:03:53]     "pilotErrorDiag": "",
[2026-03-10 06:03:53]  *** Listing of results directory ***
[2026-03-10 06:03:53] total 609188
[2026-03-10 06:03:53] -rw-r--r--. 1 boinc boinc    584627 Mar  9 18:06 pilot3.tar.gz
[2026-03-10 06:03:53] -rwx------. 1 boinc boinc     36322 Mar  9 18:09 runpilot2-wrapper.sh
[2026-03-10 06:03:53] -rw-r--r--. 1 boinc boinc      5111 Mar  9 18:11 queuedata.json
[2026-03-10 06:03:53] -rw-r--r--. 1 boinc boinc       100 Mar 10 04:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 06:03:53] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 04:07 run_atlas
[2026-03-10 06:03:53] -rw-r--r--. 1 boinc boinc       105 Mar 10 04:07 job.xml
[2026-03-10 06:03:53] -rw-r--r--. 2 boinc boinc     15845 Mar 10 04:07 start_atlas.sh
[2026-03-10 06:03:53] drwxrwx--x. 2 boinc boinc      4096 Mar 10 04:07 shared
[2026-03-10 06:03:53] -rw-r--r--. 2 boinc boinc    597964 Mar 10 04:07 input.tar.gz
[2026-03-10 06:03:53] -rw-r--r--. 1 boinc boinc      6705 Mar 10 04:07 init_data.xml
[2026-03-10 06:03:53] -rw-r--r--. 2 boinc boinc 344837557 Mar 10 04:07 EVNT.48998009._000090.pool.root.1
[2026-03-10 06:03:53] -rw-r--r--. 1 boinc boinc         0 Mar 10 04:07 boinc_lockfile
[2026-03-10 06:03:53] -rw-r--r--. 1 boinc boinc      2587 Mar 10 04:07 pandaJob.out
[2026-03-10 06:03:53] -rw-------. 1 boinc boinc   1002338 Mar 10 04:07 agis_schedconf.cvmfs.json
[2026-03-10 06:03:53] -rw-------. 1 boinc boinc   1511578 Mar 10 04:07 agis_ddmendpoints.agis.ALL.json
[2026-03-10 06:03:53] -rw-------. 1 boinc boinc       443 Mar 10 04:07 workernode_map.json
[2026-03-10 06:03:53] drwx------. 5 boinc boinc      4096 Mar 10 04:07 pilot3
[2026-03-10 06:03:53] -rw-------. 1 boinc boinc 272439995 Mar 10 06:02 HITS.48998012._002315.pool.root.1
[2026-03-10 06:03:53] -rw-r--r--. 1 boinc boinc       529 Mar 10 06:02 boinc_task_state.xml
[2026-03-10 06:03:53] -rw-------. 1 boinc boinc      1032 Mar 10 06:02 memory_monitor_summary.json
[2026-03-10 06:03:53] -rw-------. 1 boinc boinc    304687 Mar 10 06:02 log.48998012._002315.job.log.tgz.1
[2026-03-10 06:03:53] -rw-------. 1 boinc boinc      6349 Mar 10 06:03 heartbeat.json
[2026-03-10 06:03:53] -rw-------. 1 boinc boinc        95 Mar 10 06:03 pilot_heartbeat.json
[2026-03-10 06:03:53] -rw-r--r--. 1 boinc boinc      8192 Mar 10 06:03 boinc_mmap_file
[2026-03-10 06:03:53] -rw-r--r--. 1 boinc boinc        27 Mar 10 06:03 wrapper_checkpoint.txt
[2026-03-10 06:03:53] -rw-------. 1 boinc boinc      5087 Mar 10 06:03 pilotlog.txt
[2026-03-10 06:03:53] -rw-------. 1 boinc boinc    996900 Mar 10 06:03 log.48998012._002315.job.log.1
[2026-03-10 06:03:53] -rw-------. 1 boinc boinc       357 Mar 10 06:03 output.list
[2026-03-10 06:03:53] -rw-r--r--. 1 boinc boinc       620 Mar 10 06:03 runtime_log
[2026-03-10 06:03:53] -rw-------. 1 boinc boinc   1320960 Mar 10 06:03 result.tar.gz
[2026-03-10 06:03:53] -rw-------. 1 boinc boinc       662 Mar 10 06:03 sYNMDm7HtJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmsaaLDmVDsaMm.diag
[2026-03-10 06:03:53] -rw-r--r--. 1 boinc boinc      9204 Mar 10 06:03 runtime_log.err
[2026-03-10 06:03:53] -rw-r--r--. 1 boinc boinc     12396 Mar 10 06:03 stderr.txt
[2026-03-10 06:03:53] HITS file was successfully produced:
[2026-03-10 06:03:53] -rw-------. 1 boinc boinc 272439995 Mar 10 06:02 shared/HITS.pool.root.1
[2026-03-10 06:03:53]  *** Contents of shared directory: ***
[2026-03-10 06:03:53] total 604712
[2026-03-10 06:03:53] -rw-r--r--. 2 boinc boinc     15845 Mar 10 04:07 start_atlas.sh
[2026-03-10 06:03:53] -rw-r--r--. 2 boinc boinc    597964 Mar 10 04:07 input.tar.gz
[2026-03-10 06:03:53] -rw-r--r--. 2 boinc boinc 344837557 Mar 10 04:07 ATLAS.root_0
[2026-03-10 06:03:53] -rw-------. 1 boinc boinc 272439995 Mar 10 06:02 HITS.pool.root.1
[2026-03-10 06:03:53] -rw-------. 1 boinc boinc   1320960 Mar 10 06:03 result.tar.gz
06:03:54 (3078400): run_atlas exited; CPU time 26916.256537
06:03:54 (3078400): called boinc_finish(0)

</stderr_txt>
]]>

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