Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:17:45 (2964367): wrapper (7.7.26015): starting
10:17:45 (2964367): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 10:17:45] Arguments: --nthreads 4
[2026-03-10 10:17:45] Threads: 4
[2026-03-10 10:17:45] Checking for CVMFS
[2026-03-10 10:17:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 10:17:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 10:17:45] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 10:17:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 10:17:46] 2.9.2.0 3122 17587 100528 157109 1 49 30739545 36864000 0 130560 0 8190287 99.985 652677 8573 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-10 10:17:46] CVMFS is ok
[2026-03-10 10:17:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 10:17:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 10:17:46] Further information can be found at the LHC@home message board.
[2026-03-10 10:17:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 10:17:46] Checking for apptainer binary...
[2026-03-10 10:17:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 10:17:46] Running /usr/bin/apptainer --version
[2026-03-10 10:17:46] apptainer version 1.4.1-1.1
[2026-03-10 10:17:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 10:17:46] atlasA139
[2026-03-10 10:17:46] apptainer works
[2026-03-10 10:17:46] Set ATHENA_PROC_NUMBER=4
[2026-03-10 10:17:46] Set ATHENA_CORE_NUMBER=4
[2026-03-10 10:17:46] Starting ATLAS job with PandaID=7035117996
[2026-03-10 10:17:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 11:41:10]  *** The last 200 lines of the pilot log: ***
[2026-03-10 11:41:10] 2026-03-10 10:40:26,018 | INFO     | all data control threads have been joined
[2026-03-10 11:41:10] 2026-03-10 10:40:26,086 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 11:41:10] 2026-03-10 10:40:26,621 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 11:41:10] 2026-03-10 10:40:26,684 | INFO     | [job] retrieve thread has finished
[2026-03-10 11:41:10] 2026-03-10 10:40:26,716 | INFO     | [job] job monitor thread has finished
[2026-03-10 11:41:10] 2026-03-10 10:40:26,716 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 11:41:10] 2026-03-10 10:40:26,724 | INFO     | [payload] control thread has finished
[2026-03-10 11:41:10] 2026-03-10 10:40:26,862 | INFO     | [data] copytool_in thread has finished
[2026-03-10 11:41:10] 2026-03-10 10:40:26,958 | INFO     | [job] control thread has finished
[2026-03-10 11:41:10] 2026-03-10 10:40:27,024 | INFO     | [data] control thread has finished
[2026-03-10 11:41:10] 2026-03-10 10:40:27,266 | INFO     | [payload] validate_post thread has finished
[2026-03-10 11:41:10] 2026-03-10 10:40:28,069 | INFO     | [job] validate thread has finished
[2026-03-10 11:41:10] 2026-03-10 10:40:28,093 | INFO     | [data] copytool_out thread has finished
[2026-03-10 11:41:10] 2026-03-10 10:40:28,101 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 11:41:10] 2026-03-10 10:40:28,127 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 11:41:10] 2026-03-10 10:40:28,274 | INFO     | [payload] failed_post thread has finished
[2026-03-10 11:41:10] 2026-03-10 10:40:28,633 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 11:41:10] 2026-03-10 10:40:29,639 | INFO     | [job] queue monitor thread has finished
[2026-03-10 11:41:10] 2026-03-10 10:40:30,629 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 11:41:10] 2026-03-10 10:40:36,431 | INFO     | job.realtimelogging is not enabled
[2026-03-10 11:41:10] 2026-03-10 10:40:37,437 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 11:41:10] 2026-03-10 10:40:55,450 | INFO     | 4951s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-10 11:41:10] 2026-03-10 10:40:56,515 | INFO     | PID=2968493 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 11:41:10] 2026-03-10 10:40:56,515 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 11:41:10] 2026-03-10 10:40:56,515 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 11:41:10] 2026-03-10 10:40:56,515 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 11:41:10] 2026-03-10 10:41:04,167 | INFO     | [monitor] cgroup control has ended
[2026-03-10 11:41:10] 2026-03-10 10:41:05,727 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139782526699328)>', '<ExcThread(monitor, started 139781371582208)>']
[2026-03-10 11:41:10] 2026-03-10 10:41:06,569 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 11:41:10] 2026-03-10 10:41:06,570 | INFO     | [monitor] control thread has ended
[2026-03-10 11:41:10] 2026-03-10 10:41:10,753 | INFO     | all workflow threads have been joined
[2026-03-10 11:41:10] 2026-03-10 10:41:10,753 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 11:41:10] 2026-03-10 10:41:10,753 | INFO     | traces error code: 0
[2026-03-10 11:41:10] 2026-03-10 10:41:10,754 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 11:41:10] 2026-03-10 10:41:10,824 [wrapper] ==== pilot stdout END ====
[2026-03-10 11:41:10] 2026-03-10 10:41:10,828 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 11:41:10] 2026-03-10 10:41:10,832 [wrapper] pilotpid: 2968493
[2026-03-10 11:41:10] 2026-03-10 10:41:10,835 [wrapper] Pilot exit status: 0
[2026-03-10 11:41:10] 2026-03-10 10:41:10,846 [wrapper] pandaids: 7035117996
[2026-03-10 11:41:10] 2026-03-10 10:41:10,868 [wrapper] cleanup supervisor_pilot 2978215 2968494
[2026-03-10 11:41:10] 2026-03-10 10:41:10,872 [wrapper] Test setup, not cleaning
[2026-03-10 11:41:10] 2026-03-10 10:41:10,875 [wrapper] apfmon messages muted
[2026-03-10 11:41:10] 2026-03-10 10:41:10,879 [wrapper] ==== wrapper stdout END ====
[2026-03-10 11:41:10] 2026-03-10 10:41:10,882 [wrapper] ==== wrapper stderr END ====
[2026-03-10 11:41:10]  *** Error codes and diagnostics ***
[2026-03-10 11:41:10]     "exeErrorCode": 0,
[2026-03-10 11:41:10]     "exeErrorDiag": "",
[2026-03-10 11:41:10]     "pilotErrorCode": 0,
[2026-03-10 11:41:10]     "pilotErrorDiag": "",
[2026-03-10 11:41:10]  *** Listing of results directory ***
[2026-03-10 11:41:10] total 488908
[2026-03-10 11:41:10] -rw-r--r-- 1 boinc boinc    584627 Mar  1 15:22 pilot3.tar.gz
[2026-03-10 11:41:10] -rw-r--r-- 1 boinc boinc      5111 Mar  1 15:23 queuedata.json
[2026-03-10 11:41:10] -rwx------ 1 boinc boinc     36322 Mar  1 15:23 runpilot2-wrapper.sh
[2026-03-10 11:41:10] -rw-r--r-- 1 boinc boinc       100 Mar 10 10:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 11:41:10] -rwxr-xr-x 1 boinc boinc      7986 Mar 10 10:17 run_atlas
[2026-03-10 11:41:10] -rw-r--r-- 1 boinc boinc       105 Mar 10 10:17 job.xml
[2026-03-10 11:41:10] -rw-r--r-- 2 boinc boinc 276815014 Mar 10 10:17 EVNT.48220133._000177.pool.root.1
[2026-03-10 11:41:10] -rw-r--r-- 2 boinc boinc    597964 Mar 10 10:17 input.tar.gz
[2026-03-10 11:41:10] -rw-r--r-- 2 boinc boinc     15845 Mar 10 10:17 start_atlas.sh
[2026-03-10 11:41:10] drwxrwx--x 2 boinc boinc      4096 Mar 10 10:17 shared
[2026-03-10 11:41:10] -rw-r--r-- 1 boinc boinc         0 Mar 10 10:17 boinc_setup_complete
[2026-03-10 11:41:10] -rw-r--r-- 1 boinc boinc      6372 Mar 10 10:17 init_data.xml
[2026-03-10 11:41:10] -rw-r--r-- 1 boinc boinc         0 Mar 10 10:17 boinc_lockfile
[2026-03-10 11:41:10] -rw-r--r-- 1 boinc boinc      2562 Mar 10 10:17 pandaJob.out
[2026-03-10 11:41:10] -rw------- 1 boinc boinc   1005081 Mar 10 10:17 agis_schedconf.cvmfs.json
[2026-03-10 11:41:10] -rw------- 1 boinc boinc   1511578 Mar 10 10:17 agis_ddmendpoints.agis.ALL.json
[2026-03-10 11:41:10] -rw------- 1 boinc boinc       430 Mar 10 10:17 workernode_map.json
[2026-03-10 11:41:10] drwx------ 5 boinc boinc      4096 Mar 10 10:17 pilot3
[2026-03-10 11:41:10] -rw------- 1 boinc boinc 217939615 Mar 10 11:39 HITS.48838462._004015.pool.root.1
[2026-03-10 11:41:10] -rw-r--r-- 1 boinc boinc       529 Mar 10 11:40 boinc_task_state.xml
[2026-03-10 11:41:10] -rw------- 1 boinc boinc      1022 Mar 10 11:40 memory_monitor_summary.json
[2026-03-10 11:41:10] -rw------- 1 boinc boinc        95 Mar 10 11:40 pilot_heartbeat.json
[2026-03-10 11:41:10] -rw------- 1 boinc boinc    258451 Mar 10 11:40 log.48838462._004015.job.log.tgz.1
[2026-03-10 11:41:10] -rw------- 1 boinc boinc      6320 Mar 10 11:40 heartbeat.json
[2026-03-10 11:41:10] -rw-r--r-- 1 boinc boinc        27 Mar 10 11:40 wrapper_checkpoint.txt
[2026-03-10 11:41:10] -rw-r--r-- 1 boinc boinc      8192 Mar 10 11:40 boinc_mmap_file
[2026-03-10 11:41:10] -rw------- 1 boinc boinc      4935 Mar 10 11:41 pilotlog.txt
[2026-03-10 11:41:10] -rw------- 1 boinc boinc    724656 Mar 10 11:41 log.48838462._004015.job.log.1
[2026-03-10 11:41:10] -rw------- 1 boinc boinc       357 Mar 10 11:41 output.list
[2026-03-10 11:41:10] -rw-r--r-- 1 boinc boinc       620 Mar 10 11:41 runtime_log
[2026-03-10 11:41:10] -rw------- 1 boinc boinc   1003520 Mar 10 11:41 result.tar.gz
[2026-03-10 11:41:10] -rw-r--r-- 1 boinc boinc      8911 Mar 10 11:41 runtime_log.err
[2026-03-10 11:41:10] -rw------- 1 boinc boinc       660 Mar 10 11:41 oxRNDmgswG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm0fALDmE310Ln.diag
[2026-03-10 11:41:10] -rw-r--r-- 1 boinc boinc      7024 Mar 10 11:41 stderr.txt
[2026-03-10 11:41:10] HITS file was successfully produced:
[2026-03-10 11:41:10] -rw------- 1 boinc boinc 217939615 Mar 10 11:39 shared/HITS.pool.root.1
[2026-03-10 11:41:10]  *** Contents of shared directory: ***
[2026-03-10 11:41:10] total 484748
[2026-03-10 11:41:10] -rw-r--r-- 2 boinc boinc 276815014 Mar 10 10:17 ATLAS.root_0
[2026-03-10 11:41:10] -rw-r--r-- 2 boinc boinc    597964 Mar 10 10:17 input.tar.gz
[2026-03-10 11:41:10] -rw-r--r-- 2 boinc boinc     15845 Mar 10 10:17 start_atlas.sh
[2026-03-10 11:41:10] -rw------- 1 boinc boinc 217939615 Mar 10 11:39 HITS.pool.root.1
[2026-03-10 11:41:10] -rw------- 1 boinc boinc   1003520 Mar 10 11:41 result.tar.gz
11:41:12 (2964367): run_atlas exited; CPU time 18641.646269
11:41:12 (2964367): called boinc_finish(0)

</stderr_txt>
]]>

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