Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:26:08 (2484046): wrapper (7.7.26015): starting
22:26:08 (2484046): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 22:26:08] Arguments: --nthreads 4
[2026-03-09 22:26:08] Threads: 4
[2026-03-09 22:26:08] Checking for CVMFS
[2026-03-09 22:26:08] No cvmfs_config command found, will try listing directly
[2026-03-09 22:26:08] CVMFS is ok
[2026-03-09 22:26:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 22:26:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 22:26:08] Further information can be found at the LHC@home message board.
[2026-03-09 22:26:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 22:26:08] Checking for apptainer binary...
[2026-03-09 22:26:08] which: no apptainer in ((null))
[2026-03-09 22:26:08] apptainer is not installed, using version from CVMFS
[2026-03-09 22:26:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 22:26:08] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot16/slots/5/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-09 22:26:08] apptainer works
[2026-03-09 22:26:08] Set ATHENA_PROC_NUMBER=4
[2026-03-09 22:26:08] Set ATHENA_CORE_NUMBER=4
[2026-03-09 22:26:08] Starting ATLAS job with PandaID=7047527334
[2026-03-09 22:26:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot16/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:07:37 (3495089): wrapper (7.7.26015): starting
00:07:37 (3495089): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 00:07:37] Arguments: --nthreads 4
[2026-03-10 00:07:37] Threads: 4
[2026-03-10 00:07:37] This job has been restarted, cleaning up previous attempt
[2026-03-10 00:07:37] Checking for CVMFS
[2026-03-10 00:07:37] No cvmfs_config command found, will try listing directly
[2026-03-10 00:07:37] CVMFS is ok
[2026-03-10 00:07:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 00:07:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 00:07:37] Further information can be found at the LHC@home message board.
[2026-03-10 00:07:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 00:07:37] Checking for apptainer binary...
[2026-03-10 00:07:37] which: no apptainer in ((null))
[2026-03-10 00:07:37] apptainer is not installed, using version from CVMFS
[2026-03-10 00:07:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 00:07:37] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot16/slots/5/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-10 00:07:37] apptainer works
[2026-03-10 00:07:37] Set ATHENA_PROC_NUMBER=4
[2026-03-10 00:07:37] Set ATHENA_CORE_NUMBER=4
[2026-03-10 00:07:37] Starting ATLAS job with PandaID=7047527334
[2026-03-10 00:07:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot16/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 02:02:01]  *** The last 200 lines of the pilot log: ***
[2026-03-10 02:02:01] 2026-03-10 01:01:18,348 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3420483/.job.ad'
[2026-03-10 02:02:01] 2026-03-10 01:01:18,348 | INFO     | total number of processed events: 400 (read)
[2026-03-10 02:02:01] 2026-03-10 01:01:18,366 | INFO     | using path: /var/lib/boinc/var/slot16/slots/5/PanDA_Pilot-7047527334/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 02:02:01] 2026-03-10 01:01:18,367 | INFO     | extracted standard info from prmon json
[2026-03-10 02:02:01] 2026-03-10 01:01:18,367 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 02:02:01] 2026-03-10 01:01:18,367 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 02:02:01] 2026-03-10 01:01:18,367 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 02:02:01] 2026-03-10 01:01:18,367 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 02:02:01] 2026-03-10 01:01:18,369 | INFO     | fitting pss+swap vs Time
[2026-03-10 02:02:01] 2026-03-10 01:01:18,369 | INFO     | sum of square deviations: 435610028.0
[2026-03-10 02:02:01] 2026-03-10 01:01:18,369 | INFO     | sum of deviations: 3680472027.000002
[2026-03-10 02:02:01] 2026-03-10 01:01:18,369 | INFO     | mean x: 1773101070.5
[2026-03-10 02:02:01] 2026-03-10 01:01:18,369 | INFO     | mean y: 2308249.6964285714
[2026-03-10 02:02:01] 2026-03-10 01:01:18,369 | INFO     | intersect: -14978634500.820345
[2026-03-10 02:02:01] 2026-03-10 01:01:18,370 | INFO     | chi2: 1.9094213696839177
[2026-03-10 02:02:01] 2026-03-10 01:01:18,370 | INFO     | sum of square deviations: 379832238.0
[2026-03-10 02:02:01] 2026-03-10 01:01:18,370 | INFO     | sum of deviations: 10396559278.000006
[2026-03-10 02:02:01] 2026-03-10 01:01:18,370 | INFO     | mean x: 1773100918.0
[2026-03-10 02:02:01] 2026-03-10 01:01:18,370 | INFO     | mean y: 2325910.121495327
[2026-03-10 02:02:01] 2026-03-10 01:01:18,370 | INFO     | intersect: -48530017992.354805
[2026-03-10 02:02:01] 2026-03-10 01:01:18,370 | INFO     | chi2: 1.0926134413208703
[2026-03-10 02:02:01] 2026-03-10 01:01:18,370 | INFO     | current chi2=1.0926134413208703 (change=42.77777243575421 %)
[2026-03-10 02:02:01] 2026-03-10 01:01:18,370 | INFO     | sum of square deviations: 329031285.5
[2026-03-10 02:02:01] 2026-03-10 01:01:18,371 | INFO     | sum of deviations: 9873060846.5
[2026-03-10 02:02:01] 2026-03-10 01:01:18,371 | INFO     | mean x: 1773100765.5
[2026-03-10 02:02:01] 2026-03-10 01:01:18,371 | INFO     | mean y: 2324337.4411764704
[2026-03-10 02:02:01] 2026-03-10 01:01:18,371 | INFO     | intersect: -53202135287.59113
[2026-03-10 02:02:01] 2026-03-10 01:01:18,371 | INFO     | chi2: 1.094389331054695
[2026-03-10 02:02:01] 2026-03-10 01:01:18,371 | INFO     | current chi2=1.094389331054695 (change=-0.16253595889117095 %)
[2026-03-10 02:02:01] 2026-03-10 01:01:18,371 | INFO     | right removable region: 101
[2026-03-10 02:02:01] 2026-03-10 01:01:18,371 | INFO     | sum of square deviations: 379832238.0
[2026-03-10 02:02:01] 2026-03-10 01:01:18,371 | INFO     | sum of deviations: -6044607730.0
[2026-03-10 02:02:01] 2026-03-10 01:01:18,371 | INFO     | mean x: 1773101223.0
[2026-03-10 02:02:01] 2026-03-10 01:01:18,371 | INFO     | mean y: 2333976.261682243
[2026-03-10 02:02:01] 2026-03-10 01:01:18,371 | INFO     | intersect: 28219268418.298836
[2026-03-10 02:02:01] 2026-03-10 01:01:18,371 | INFO     | chi2: 0.8488567723964137
[2026-03-10 02:02:01] 2026-03-10 01:01:18,371 | INFO     | current chi2=0.8488567723964137 (change=55.54376912954883 %)
[2026-03-10 02:02:01] 2026-03-10 01:01:18,372 | INFO     | sum of square deviations: 329031285.5
[2026-03-10 02:02:01] 2026-03-10 01:01:18,372 | INFO     | sum of deviations: -5580301014.5
[2026-03-10 02:02:01] 2026-03-10 01:01:18,372 | INFO     | mean x: 1773101375.5
[2026-03-10 02:02:01] 2026-03-10 01:01:18,372 | INFO     | mean y: 2332601.18627451
[2026-03-10 02:02:01] 2026-03-10 01:01:18,372 | INFO     | intersect: 30073756932.396248
[2026-03-10 02:02:01] 2026-03-10 01:01:18,372 | INFO     | chi2: 0.8495475844588558
[2026-03-10 02:02:01] 2026-03-10 01:01:18,372 | INFO     | current chi2=0.8495475844588558 (change=-0.08138146326993553 %)
[2026-03-10 02:02:01] 2026-03-10 01:01:18,372 | INFO     | left removable region: 20
[2026-03-10 02:02:01] 2026-03-10 01:01:18,372 | INFO     | sum of square deviations: 164765880.0
[2026-03-10 02:02:01] 2026-03-10 01:01:18,372 | INFO     | sum of deviations: 452377585.99999994
[2026-03-10 02:02:01] 2026-03-10 01:01:18,372 | INFO     | mean x: 1773101345.0
[2026-03-10 02:02:01] 2026-03-10 01:01:18,372 | INFO     | mean y: 2354776.6666666665
[2026-03-10 02:02:01] 2026-03-10 01:01:18,372 | INFO     | intersect: -4865833383.311923
[2026-03-10 02:02:01] 2026-03-10 01:01:18,372 | INFO     | chi2: 8.42009128078978e-05
[2026-03-10 02:02:01] 2026-03-10 01:01:18,373 | INFO     | current memory leak: 2.75 B/s (using 81 data points, chi2=0.00)
[2026-03-10 02:02:01] 2026-03-10 01:01:18,373 | INFO     | could have reported an average CPU frequency of 3606 MHz (7 samples)
[2026-03-10 02:02:01] 2026-03-10 01:01:18,373 | INFO     | ..............................
[2026-03-10 02:02:01] 2026-03-10 01:01:18,373 | INFO     | . Timing measurements:
[2026-03-10 02:02:01] 2026-03-10 01:01:18,373 | INFO     | . get job = 0 s
[2026-03-10 02:02:01] 2026-03-10 01:01:18,373 | INFO     | . initial setup = 0 s
[2026-03-10 02:02:01] 2026-03-10 01:01:18,373 | INFO     | . payload setup = 4 s
[2026-03-10 02:02:01] 2026-03-10 01:01:18,373 | INFO     | . stage-in = 0 s
[2026-03-10 02:02:01] 2026-03-10 01:01:18,373 | INFO     | . payload execution = 6792 s
[2026-03-10 02:02:01] 2026-03-10 01:01:18,373 | INFO     | . stage-out = 0 s
[2026-03-10 02:02:01] 2026-03-10 01:01:18,373 | INFO     | . log creation = 0 s
[2026-03-10 02:02:01] 2026-03-10 01:01:18,373 | INFO     | ..............................
[2026-03-10 02:02:01] 2026-03-10 01:01:18,424 | INFO     | 
[2026-03-10 02:02:01] 2026-03-10 01:01:18,425 | INFO     | job summary report
[2026-03-10 02:02:01] 2026-03-10 01:01:18,425 | INFO     | --------------------------------------------------
[2026-03-10 02:02:01] 2026-03-10 01:01:18,425 | INFO     | PanDA job id: 7047527334
[2026-03-10 02:02:01] 2026-03-10 01:01:18,425 | INFO     | task id: 48998012
[2026-03-10 02:02:01] 2026-03-10 01:01:18,425 | INFO     | errors: (none)
[2026-03-10 02:02:01] 2026-03-10 01:01:18,425 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 02:02:01] 2026-03-10 01:01:18,425 | INFO     | pilot state: finished 
[2026-03-10 02:02:01] 2026-03-10 01:01:18,425 | INFO     | transexitcode: 0
[2026-03-10 02:02:01] 2026-03-10 01:01:18,425 | INFO     | exeerrorcode: 0
[2026-03-10 02:02:01] 2026-03-10 01:01:18,425 | INFO     | exeerrordiag: 
[2026-03-10 02:02:01] 2026-03-10 01:01:18,425 | INFO     | exitcode: 0
[2026-03-10 02:02:01] 2026-03-10 01:01:18,425 | INFO     | exitmsg: OK
[2026-03-10 02:02:01] 2026-03-10 01:01:18,425 | INFO     | cpuconsumptiontime: 26334 s
[2026-03-10 02:02:01] 2026-03-10 01:01:18,425 | INFO     | nevents: 400
[2026-03-10 02:02:01] 2026-03-10 01:01:18,425 | INFO     | neventsw: 0
[2026-03-10 02:02:01] 2026-03-10 01:01:18,425 | INFO     | pid: 3511179
[2026-03-10 02:02:01] 2026-03-10 01:01:18,425 | INFO     | pgrp: 3511179
[2026-03-10 02:02:01] 2026-03-10 01:01:18,425 | INFO     | corecount: 4
[2026-03-10 02:02:01] 2026-03-10 01:01:18,425 | INFO     | event service: False
[2026-03-10 02:02:01] 2026-03-10 01:01:18,426 | INFO     | sizes: {0: 2279177, 1: 2280306, 11: 2280306, 6801: 2307554, 6802: 2316630, 6803: 2316768}
[2026-03-10 02:02:01] 2026-03-10 01:01:18,426 | INFO     | --------------------------------------------------
[2026-03-10 02:02:01] 2026-03-10 01:01:18,426 | INFO     | 
[2026-03-10 02:02:01] 2026-03-10 01:01:18,426 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot16/slots/5
[2026-03-10 02:02:01] 2026-03-10 01:01:18,443 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 02:02:01] 2026-03-10 01:01:18,443 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 02:02:01] 2026-03-10 01:01:18,443 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 02:02:01] 2026-03-10 01:01:18,443 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 02:02:01] 2026-03-10 01:01:18,443 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 02:02:01] 2026-03-10 01:01:18,443 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 02:02:01] 2026-03-10 01:01:18,443 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 02:02:01] 2026-03-10 01:01:18,443 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 02:02:01] 2026-03-10 01:01:18,443 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 02:02:01] 2026-03-10 01:01:18,443 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 02:02:01] 2026-03-10 01:01:18,443 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 02:02:01] 2026-03-10 01:01:18,443 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 02:02:01] 2026-03-10 01:01:18,444 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 02:02:01] 2026-03-10 01:01:18,444 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 02:02:01] 2026-03-10 01:01:18,444 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 02:02:01] 2026-03-10 01:01:18,444 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 02:02:01] 2026-03-10 01:01:18,444 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 02:02:01] 2026-03-10 01:01:18,444 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 02:02:01] 2026-03-10 01:01:18,444 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 02:02:01] 2026-03-10 01:01:18,444 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 02:02:01] 2026-03-10 01:01:18,444 | INFO     | job 7047527334 has completed (purged errors)
[2026-03-10 02:02:01] 2026-03-10 01:01:18,444 | INFO     | overall cleanup function is called
[2026-03-10 02:02:01] 2026-03-10 01:01:19,450 | INFO     | --- collectZombieJob: --- 10, [3511179]
[2026-03-10 02:02:01] 2026-03-10 01:01:19,451 | INFO     | zombie collector waiting for pid 3511179
[2026-03-10 02:02:01] 2026-03-10 01:01:19,451 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 02:02:01] 2026-03-10 01:01:19,451 | INFO     | collected zombie processes
[2026-03-10 02:02:01] 2026-03-10 01:01:19,451 | INFO     | will attempt to kill all subprocesses of pid=3511179
[2026-03-10 02:02:01] 2026-03-10 01:01:19,858 | INFO     | process IDs to be killed: [3511179] (in reverse order)
[2026-03-10 02:02:01] 2026-03-10 01:01:20,068 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 02:02:01] 2026-03-10 01:01:20,068 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 02:02:01] 2026-03-10 01:01:20,095 | INFO     | did not find any defunct processes belonging to 3511179
[2026-03-10 02:02:01] 2026-03-10 01:01:20,119 | INFO     | did not find any defunct processes belonging to 3511179
[2026-03-10 02:02:01] 2026-03-10 01:01:20,120 | INFO     | ready for new job
[2026-03-10 02:02:01] 2026-03-10 01:01:20,120 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 02:02:01] 2026-03-10 01:01:20,121 | INFO     | **************************************
[2026-03-10 02:02:01] 2026-03-10 01:01:20,124 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 02:02:01] 2026-03-10 01:01:20,124 | INFO     | **************************************
[2026-03-10 02:02:01] 2026-03-10 01:01:20,124 | INFO     | 
[2026-03-10 02:02:01] 2026-03-10 01:01:20,130 | INFO     | architecture information:
[2026-03-10 02:02:01] 2026-03-10 01:01:20,130 | INFO     | executing command: cat /etc/os-release
[2026-03-10 02:02:01] 2026-03-10 01:01:20,145 | INFO     | cat /etc/os-release:
[2026-03-10 02:02:01] NAME="CentOS Linux"
[2026-03-10 02:02:01] VERSION="7 (Core)"
[2026-03-10 02:02:01] ID="centos"
[2026-03-10 02:02:01] ID_LIKE="rhel fedora"
[2026-03-10 02:02:01] VERSION_ID="7"
[2026-03-10 02:02:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 02:02:01] ANSI_COLOR="0;31"
[2026-03-10 02:02:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 02:02:01] HOME_URL="https://www.centos.org/"
[2026-03-10 02:02:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 02:02:01] 
[2026-03-10 02:02:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 02:02:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 02:02:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 02:02:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 02:02:01] 
[2026-03-10 02:02:01] 2026-03-10 01:01:20,145 | INFO     | **************************************
[2026-03-10 02:02:01] 2026-03-10 01:01:20,647 | INFO     | executing command: df -mP /var/lib/boinc/var/slot16/slots/5
[2026-03-10 02:02:01] 2026-03-10 01:01:20,657 | INFO     | sufficient remaining disk space (20944257024 B)
[2026-03-10 02:02:01] 2026-03-10 01:01:20,657 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 02:02:01] 2026-03-10 01:01:20,657 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 02:02:01] 2026-03-10 01:01:20,657 | INFO     | update_server=False
[2026-03-10 02:02:01] 2026-03-10 01:01:20,657 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 02:02:01] 2026-03-10 01:01:20,657 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 02:02:01] 2026-03-10 01:01:20,802 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-10 02:02:01] 2026-03-10 01:01:20,802 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-10 02:02:01] 2026-03-10 01:01:20,802 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 02:02:01] 2026-03-10 01:01:20,802 | INFO     | will abort loop
[2026-03-10 02:02:01] 2026-03-10 01:01:21,009 | INFO     | all data control threads have been joined
[2026-03-10 02:02:01] 2026-03-10 01:01:21,012 | INFO     | all job control threads have been joined
[2026-03-10 02:02:01] 2026-03-10 01:01:21,015 | INFO     | all payload control threads have been joined
[2026-03-10 02:02:01] 2026-03-10 01:01:21,662 | INFO     | [job] retrieve thread has finished
[2026-03-10 02:02:01] 2026-03-10 01:01:21,732 | INFO     | [job] validate thread has finished
[2026-03-10 02:02:01] 2026-03-10 01:01:21,806 | INFO     | [job] job monitor thread has finished
[2026-03-10 02:02:01] 2026-03-10 01:01:21,877 | INFO     | [payload] validate_post thread has finished
[2026-03-10 02:02:01] 2026-03-10 01:01:22,013 | INFO     | [data] control thread has finished
[2026-03-10 02:02:01] 2026-03-10 01:01:22,016 | INFO     | [payload] control thread has finished
[2026-03-10 02:02:01] 2026-03-10 01:01:22,017 | INFO     | [job] control thread has finished
[2026-03-10 02:02:01] 2026-03-10 01:01:22,053 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 02:02:01] 2026-03-10 01:01:22,084 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 02:02:01] 2026-03-10 01:01:22,286 | INFO     | [data] copytool_in thread has finished
[2026-03-10 02:02:01] 2026-03-10 01:01:22,663 | INFO     | [data] copytool_out thread has finished
[2026-03-10 02:02:01] 2026-03-10 01:01:22,878 | INFO     | [payload] failed_post thread has finished
[2026-03-10 02:02:01] 2026-03-10 01:01:23,025 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 02:02:01] 2026-03-10 01:01:23,077 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 02:02:01] 2026-03-10 01:01:23,434 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 02:02:01] 2026-03-10 01:01:23,784 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 02:02:01] 2026-03-10 01:01:24,440 | INFO     | [job] queue monitor thread has finished
[2026-03-10 02:02:01] 2026-03-10 01:01:27,789 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 02:02:01] 2026-03-10 01:01:50,344 | INFO     | PID=3499617 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 02:02:01] 2026-03-10 01:01:50,344 | INFO     | .. there are 57 such processes running
[2026-03-10 02:02:01] 2026-03-10 01:01:50,344 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 02:02:01] 2026-03-10 01:01:50,344 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 02:02:01] 2026-03-10 01:01:50,344 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 02:02:01] 2026-03-10 01:01:55,430 | INFO     | [monitor] cgroup control has ended
[2026-03-10 02:02:01] 2026-03-10 01:01:56,370 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22687449204544)>', '<ExcThread(monitor, started 22687149700864)>']
[2026-03-10 02:02:01] 2026-03-10 01:01:56,373 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 02:02:01] 2026-03-10 01:01:56,374 | INFO     | [monitor] control thread has ended
[2026-03-10 02:02:01] 2026-03-10 01:02:01,395 | INFO     | all workflow threads have been joined
[2026-03-10 02:02:01] 2026-03-10 01:02:01,396 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 02:02:01] 2026-03-10 01:02:01,396 | INFO     | traces error code: 0
[2026-03-10 02:02:01] 2026-03-10 01:02:01,396 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 02:02:01] 2026-03-10 01:02:01,559 [wrapper] ==== pilot stdout END ====
[2026-03-10 02:02:01] 2026-03-10 01:02:01,561 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 02:02:01] 2026-03-10 01:02:01,563 [wrapper] pilotpid: 3499617
[2026-03-10 02:02:01] 2026-03-10 01:02:01,564 [wrapper] Pilot exit status: 0
[2026-03-10 02:02:01] 2026-03-10 01:02:01,570 [wrapper] pandaids: 7047527334 7047527334
[2026-03-10 02:02:01] 2026-03-10 01:02:01,673 [wrapper] cleanup supervisor_pilot  363853 3499618
[2026-03-10 02:02:01] 2026-03-10 01:02:01,675 [wrapper] Test setup, not cleaning
[2026-03-10 02:02:01] 2026-03-10 01:02:01,677 [wrapper] apfmon messages muted
[2026-03-10 02:02:01] 2026-03-10 01:02:01,680 [wrapper] ==== wrapper stdout END ====
[2026-03-10 02:02:01] 2026-03-10 01:02:01,682 [wrapper] ==== wrapper stderr END ====
[2026-03-10 02:02:01]  *** Error codes and diagnostics ***
[2026-03-10 02:02:01]     "exeErrorCode": 0,
[2026-03-10 02:02:01]     "exeErrorDiag": "",
[2026-03-10 02:02:01]     "pilotErrorCode": 0,
[2026-03-10 02:02:01]     "pilotErrorDiag": "",
[2026-03-10 02:02:01]  *** Listing of results directory ***
[2026-03-10 02:02:01] total 932368
[2026-03-10 02:02:01] drwx------. 5 boinc boinc      4096 Feb  2 16:00 pilot3
[2026-03-10 02:02:01] -rw-r--r--. 1 boinc boinc    584627 Mar  9 17:24 pilot3.tar.gz
[2026-03-10 02:02:01] -rw-r--r--. 1 boinc boinc      5111 Mar  9 17:46 queuedata.json
[2026-03-10 02:02:01] -rwx------. 1 boinc boinc     36322 Mar  9 17:46 runpilot2-wrapper.sh
[2026-03-10 02:02:01] -rw-r--r--. 1 boinc boinc       100 Mar  9 22:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 02:02:01] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 22:26 run_atlas
[2026-03-10 02:02:01] -rw-r--r--. 1 boinc boinc       105 Mar  9 22:26 job.xml
[2026-03-10 02:02:01] -rw-r--r--. 3 boinc boinc 341169852 Mar  9 22:26 EVNT.48998009._000080.pool.root.1
[2026-03-10 02:02:01] -rw-r--r--. 3 boinc boinc 341169852 Mar  9 22:26 ATLAS.root_0
[2026-03-10 02:02:01] -rw-r--r--. 2 boinc boinc     15845 Mar  9 22:26 start_atlas.sh
[2026-03-10 02:02:01] drwxrwx--x. 2 boinc boinc      4096 Mar  9 22:26 shared
[2026-03-10 02:02:01] -rw-r--r--. 2 boinc boinc    597967 Mar  9 22:26 input.tar.gz
[2026-03-10 02:02:01] -rw-r--r--. 1 boinc boinc         0 Mar  9 22:26 boinc_lockfile
[2026-03-10 02:02:01] -rw-r--r--. 1 boinc boinc      2587 Mar 10 00:07 pandaJob.out
[2026-03-10 02:02:01] -rw-------. 1 boinc boinc   1002738 Mar 10 00:07 agis_schedconf.cvmfs.json
[2026-03-10 02:02:01] -rw-------. 1 boinc boinc       444 Mar 10 00:07 workernode_map.json
[2026-03-10 02:02:01] -rw-r--r--. 1 boinc boinc      6710 Mar 10 00:07 init_data.xml
[2026-03-10 02:02:01] -rw-r--r--. 1 boinc boinc       531 Mar 10 02:00 boinc_task_state.xml
[2026-03-10 02:02:01] -rw-------. 1 boinc boinc 265879151 Mar 10 02:00 HITS.48998012._002070.pool.root.1
[2026-03-10 02:02:01] -rw-------. 1 boinc boinc        97 Mar 10 02:01 pilot_heartbeat.json
[2026-03-10 02:02:01] -rw-------. 1 boinc boinc      1041 Mar 10 02:01 memory_monitor_summary.json
[2026-03-10 02:02:01] -rw-------. 1 boinc boinc   1511578 Mar 10 02:01 agis_ddmendpoints.agis.ALL.json
[2026-03-10 02:02:01] -rw-------. 1 boinc boinc    311410 Mar 10 02:01 log.48998012._002070.job.log.tgz.1
[2026-03-10 02:02:01] -rw-------. 1 boinc boinc      6369 Mar 10 02:01 heartbeat.json
[2026-03-10 02:02:01] -rw-r--r--. 1 boinc boinc      8192 Mar 10 02:01 boinc_mmap_file
[2026-03-10 02:02:01] -rw-r--r--. 1 boinc boinc        28 Mar 10 02:01 wrapper_checkpoint.txt
[2026-03-10 02:02:01] -rw-------. 1 boinc boinc      5015 Mar 10 02:02 pilotlog.txt
[2026-03-10 02:02:01] -rw-------. 1 boinc boinc    982982 Mar 10 02:02 log.48998012._002070.job.log.1
[2026-03-10 02:02:01] -rw-------. 1 boinc boinc       357 Mar 10 02:02 output.list
[2026-03-10 02:02:01] -rw-r--r--. 1 boinc boinc       620 Mar 10 02:02 runtime_log
[2026-03-10 02:02:01] -rw-------. 1 boinc boinc   1310720 Mar 10 02:02 result.tar.gz
[2026-03-10 02:02:01] -rw-r--r--. 1 boinc boinc      9281 Mar 10 02:02 runtime_log.err
[2026-03-10 02:02:01] -rw-------. 1 boinc boinc       790 Mar 10 02:02 6NSLDmOvsJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmf8cLDmatQTtm.diag
[2026-03-10 02:02:01] -rw-r--r--. 1 boinc boinc     22799 Mar 10 02:02 stderr.txt
[2026-03-10 02:02:01] HITS file was successfully produced:
[2026-03-10 02:02:01] -rw-------. 1 boinc boinc 265879151 Mar 10 02:00 shared/HITS.pool.root.1
[2026-03-10 02:02:01]  *** Contents of shared directory: ***
[2026-03-10 02:02:01] total 594712
[2026-03-10 02:02:01] -rw-r--r--. 3 boinc boinc 341169852 Mar  9 22:26 ATLAS.root_0
[2026-03-10 02:02:01] -rw-r--r--. 2 boinc boinc     15845 Mar  9 22:26 start_atlas.sh
[2026-03-10 02:02:01] -rw-r--r--. 2 boinc boinc    597967 Mar  9 22:26 input.tar.gz
[2026-03-10 02:02:01] -rw-------. 1 boinc boinc 265879151 Mar 10 02:00 HITS.pool.root.1
[2026-03-10 02:02:01] -rw-------. 1 boinc boinc   1310720 Mar 10 02:02 result.tar.gz
02:02:03 (3495089): run_atlas exited; CPU time 26611.126687
02:02:03 (3495089): called boinc_finish(0)

</stderr_txt>
]]>

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