Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:29:27 (3940183): wrapper (7.7.26015): starting
05:29:27 (3940183): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 05:29:27] Arguments: --nthreads 4
[2026-03-10 05:29:27] Threads: 4
[2026-03-10 05:29:27] Checking for CVMFS
[2026-03-10 05:29:27] No cvmfs_config command found, will try listing directly
[2026-03-10 05:29:27] CVMFS is ok
[2026-03-10 05:29:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 05:29:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 05:29:27] Further information can be found at the LHC@home message board.
[2026-03-10 05:29:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 05:29:27] Checking for apptainer binary...
[2026-03-10 05:29:27] which: no apptainer in ((null))
[2026-03-10 05:29:27] apptainer is not installed, using version from CVMFS
[2026-03-10 05:29:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 05:29:27] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot20/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2026-03-10 05:29:27] apptainer works
[2026-03-10 05:29:27] Set ATHENA_PROC_NUMBER=4
[2026-03-10 05:29:27] Set ATHENA_CORE_NUMBER=4
[2026-03-10 05:29:27] Starting ATLAS job with PandaID=7047275331
[2026-03-10 05:29:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot20/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 09:54:30]  *** The last 200 lines of the pilot log: ***
[2026-03-10 09:54:30] 2026-03-10 08:53:41,633 | INFO     | job 7047275331 has state=finished
[2026-03-10 09:54:30] 2026-03-10 08:53:41,633 | INFO     | preparing for final server update for job 7047275331 in state='finished'
[2026-03-10 09:54:30] 2026-03-10 08:53:41,634 | INFO     | reading metadata from: /var/lib/boinc/var/slot20/slots/2/PanDA_Pilot-7047275331/jobReport.json
[2026-03-10 09:54:30] 2026-03-10 08:53:41,636 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot20/slots/2/workernode_map.json
[2026-03-10 09:54:30] 2026-03-10 08:53:41,637 | INFO     | this job has now completed (state=finished)
[2026-03-10 09:54:30] 2026-03-10 08:53:41,637 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 09:54:30] 2026-03-10 08:53:41,637 | INFO     | log transfer has been attempted: DONE
[2026-03-10 09:54:30] 2026-03-10 08:53:41,637 | INFO     | job 7047275331 has finished - writing final server update
[2026-03-10 09:54:30] 2026-03-10 08:53:41,637 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1015155/.job.ad'
[2026-03-10 09:54:30] 2026-03-10 08:53:41,637 | INFO     | total number of processed events: 400 (read)
[2026-03-10 09:54:30] 2026-03-10 08:53:41,663 | INFO     | using path: /var/lib/boinc/var/slot20/slots/2/PanDA_Pilot-7047275331/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 09:54:30] 2026-03-10 08:53:41,663 | INFO     | extracted standard info from prmon json
[2026-03-10 09:54:30] 2026-03-10 08:53:41,664 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 09:54:30] 2026-03-10 08:53:41,664 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 09:54:30] 2026-03-10 08:53:41,664 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 09:54:30] 2026-03-10 08:53:41,664 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 09:54:30] 2026-03-10 08:53:41,669 | INFO     | fitting pss+swap vs Time
[2026-03-10 09:54:30] 2026-03-10 08:53:41,669 | INFO     | sum of square deviations: 5387301010.0
[2026-03-10 09:54:30] 2026-03-10 08:53:41,671 | INFO     | sum of deviations: 25054427946.999996
[2026-03-10 09:54:30] 2026-03-10 08:53:41,671 | INFO     | mean x: 1773124901.0
[2026-03-10 09:54:30] 2026-03-10 08:53:41,672 | INFO     | mean y: 2349474.83011583
[2026-03-10 09:54:30] 2026-03-10 08:53:41,672 | INFO     | intersect: -8243826113.033685
[2026-03-10 09:54:30] 2026-03-10 08:53:41,672 | INFO     | chi2: 1.3486145467958108
[2026-03-10 09:54:30] 2026-03-10 08:53:41,673 | INFO     | sum of square deviations: 5081276667.5
[2026-03-10 09:54:30] 2026-03-10 08:53:41,675 | INFO     | sum of deviations: 24329844082.999992
[2026-03-10 09:54:30] 2026-03-10 08:53:41,675 | INFO     | mean x: 1773124748.5
[2026-03-10 09:54:30] 2026-03-10 08:53:41,675 | INFO     | mean y: 2349113.7007874018
[2026-03-10 09:54:30] 2026-03-10 08:53:41,675 | INFO     | intersect: -8487613447.605381
[2026-03-10 09:54:30] 2026-03-10 08:53:41,675 | INFO     | chi2: 1.3491065958834076
[2026-03-10 09:54:30] 2026-03-10 08:53:41,675 | INFO     | current chi2=1.3491065958834076 (change=-0.0364855242564214 %)
[2026-03-10 09:54:30] 2026-03-10 08:53:41,676 | INFO     | right removable region: 253
[2026-03-10 09:54:30] 2026-03-10 08:53:41,676 | INFO     | sum of square deviations: 5081276667.5
[2026-03-10 09:54:30] 2026-03-10 08:53:41,678 | INFO     | sum of deviations: -8362705695.999993
[2026-03-10 09:54:30] 2026-03-10 08:53:41,678 | INFO     | mean x: 1773125053.5
[2026-03-10 09:54:30] 2026-03-10 08:53:41,678 | INFO     | mean y: 2365963.244094488
[2026-03-10 09:54:30] 2026-03-10 08:53:41,678 | INFO     | intersect: 2920554433.371271
[2026-03-10 09:54:30] 2026-03-10 08:53:41,679 | INFO     | chi2: 0.03357459785048669
[2026-03-10 09:54:30] 2026-03-10 08:53:41,679 | INFO     | current chi2=0.03357459785048669 (change=97.51043780965756 %)
[2026-03-10 09:54:30] 2026-03-10 08:53:41,679 | INFO     | sum of square deviations: 4787066500.0
[2026-03-10 09:54:30] 2026-03-10 08:53:41,681 | INFO     | sum of deviations: -8989166058.0
[2026-03-10 09:54:30] 2026-03-10 08:53:41,681 | INFO     | mean x: 1773125206.0
[2026-03-10 09:54:30] 2026-03-10 08:53:41,681 | INFO     | mean y: 2366277.3815261046
[2026-03-10 09:54:30] 2026-03-10 08:53:41,681 | INFO     | intersect: 3331945450.4219375
[2026-03-10 09:54:30] 2026-03-10 08:53:41,682 | INFO     | chi2: 0.029893681645314234
[2026-03-10 09:54:30] 2026-03-10 08:53:41,682 | INFO     | current chi2=0.029893681645314234 (change=10.963396260363846 %)
[2026-03-10 09:54:30] 2026-03-10 08:53:41,682 | INFO     | left removable region: 20
[2026-03-10 09:54:30] 2026-03-10 08:53:41,682 | INFO     | sum of square deviations: 3922276332.0
[2026-03-10 09:54:30] 2026-03-10 08:53:41,684 | INFO     | sum of deviations: -5125536529.0
[2026-03-10 09:54:30] 2026-03-10 08:53:41,684 | INFO     | mean x: 1773125328.0
[2026-03-10 09:54:30] 2026-03-10 08:53:41,684 | INFO     | mean y: 2363949.6051502144
[2026-03-10 09:54:30] 2026-03-10 08:53:41,684 | INFO     | intersect: 2319441551.9690185
[2026-03-10 09:54:30] 2026-03-10 08:53:41,685 | INFO     | chi2: 0.026304496750963167
[2026-03-10 09:54:30] 2026-03-10 08:53:41,685 | INFO     | current memory leak: -1.31 B/s (using 233 data points, chi2=0.03)
[2026-03-10 09:54:30] 2026-03-10 08:53:41,685 | INFO     | could have reported an average CPU frequency of 2694 MHz (12 samples)
[2026-03-10 09:54:30] 2026-03-10 08:53:41,685 | INFO     | ..............................
[2026-03-10 09:54:30] 2026-03-10 08:53:41,685 | INFO     | . Timing measurements:
[2026-03-10 09:54:30] 2026-03-10 08:53:41,686 | INFO     | . get job = 0 s
[2026-03-10 09:54:30] 2026-03-10 08:53:41,686 | INFO     | . initial setup = 14 s
[2026-03-10 09:54:30] 2026-03-10 08:53:41,686 | INFO     | . payload setup = 10 s
[2026-03-10 09:54:30] 2026-03-10 08:53:41,686 | INFO     | . stage-in = 0 s
[2026-03-10 09:54:30] 2026-03-10 08:53:41,686 | INFO     | . payload execution = 15792 s
[2026-03-10 09:54:30] 2026-03-10 08:53:41,686 | INFO     | . stage-out = 1 s
[2026-03-10 09:54:30] 2026-03-10 08:53:41,686 | INFO     | . log creation = 0 s
[2026-03-10 09:54:30] 2026-03-10 08:53:41,686 | INFO     | ..............................
[2026-03-10 09:54:30] 2026-03-10 08:53:41,815 | INFO     | 
[2026-03-10 09:54:30] 2026-03-10 08:53:41,815 | INFO     | job summary report
[2026-03-10 09:54:30] 2026-03-10 08:53:41,815 | INFO     | --------------------------------------------------
[2026-03-10 09:54:30] 2026-03-10 08:53:41,815 | INFO     | PanDA job id: 7047275331
[2026-03-10 09:54:30] 2026-03-10 08:53:41,815 | INFO     | task id: 48998032
[2026-03-10 09:54:30] 2026-03-10 08:53:41,815 | INFO     | errors: (none)
[2026-03-10 09:54:30] 2026-03-10 08:53:41,815 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 09:54:30] 2026-03-10 08:53:41,816 | INFO     | pilot state: finished 
[2026-03-10 09:54:30] 2026-03-10 08:53:41,816 | INFO     | transexitcode: 0
[2026-03-10 09:54:30] 2026-03-10 08:53:41,816 | INFO     | exeerrorcode: 0
[2026-03-10 09:54:30] 2026-03-10 08:53:41,816 | INFO     | exeerrordiag: 
[2026-03-10 09:54:30] 2026-03-10 08:53:41,816 | INFO     | exitcode: 0
[2026-03-10 09:54:30] 2026-03-10 08:53:41,816 | INFO     | exitmsg: OK
[2026-03-10 09:54:30] 2026-03-10 08:53:41,816 | INFO     | cpuconsumptiontime: 58954 s
[2026-03-10 09:54:30] 2026-03-10 08:53:41,816 | INFO     | nevents: 400
[2026-03-10 09:54:30] 2026-03-10 08:53:41,816 | INFO     | neventsw: 0
[2026-03-10 09:54:30] 2026-03-10 08:53:41,816 | INFO     | pid: 3950315
[2026-03-10 09:54:30] 2026-03-10 08:53:41,816 | INFO     | pgrp: 3950315
[2026-03-10 09:54:30] 2026-03-10 08:53:41,816 | INFO     | corecount: 4
[2026-03-10 09:54:30] 2026-03-10 08:53:41,817 | INFO     | event service: False
[2026-03-10 09:54:30] 2026-03-10 08:53:41,817 | INFO     | sizes: {0: 2279139, 1: 2280208, 2: 2280268, 12: 2280296, 15807: 2312425, 15809: 2321445, 15812: 2321823}
[2026-03-10 09:54:30] 2026-03-10 08:53:41,817 | INFO     | --------------------------------------------------
[2026-03-10 09:54:30] 2026-03-10 08:53:41,817 | INFO     | 
[2026-03-10 09:54:30] 2026-03-10 08:53:41,817 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot20/slots/2
[2026-03-10 09:54:30] 2026-03-10 08:53:41,859 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 09:54:30] 2026-03-10 08:53:41,860 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 09:54:30] 2026-03-10 08:53:41,860 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 09:54:30] 2026-03-10 08:53:41,860 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 09:54:30] 2026-03-10 08:53:41,860 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 09:54:30] 2026-03-10 08:53:41,860 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 09:54:30] 2026-03-10 08:53:41,860 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 09:54:30] 2026-03-10 08:53:41,860 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 09:54:30] 2026-03-10 08:53:41,860 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 09:54:30] 2026-03-10 08:53:41,860 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 09:54:30] 2026-03-10 08:53:41,860 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 09:54:30] 2026-03-10 08:53:41,861 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 09:54:30] 2026-03-10 08:53:41,861 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 09:54:30] 2026-03-10 08:53:41,861 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 09:54:30] 2026-03-10 08:53:41,861 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 09:54:30] 2026-03-10 08:53:41,861 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 09:54:30] 2026-03-10 08:53:41,861 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 09:54:30] 2026-03-10 08:53:41,861 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 09:54:30] 2026-03-10 08:53:41,861 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 09:54:30] 2026-03-10 08:53:41,861 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 09:54:30] 2026-03-10 08:53:41,862 | INFO     | job 7047275331 has completed (purged errors)
[2026-03-10 09:54:30] 2026-03-10 08:53:41,862 | INFO     | overall cleanup function is called
[2026-03-10 09:54:30] 2026-03-10 08:53:42,871 | INFO     | --- collectZombieJob: --- 10, [3950315]
[2026-03-10 09:54:30] 2026-03-10 08:53:42,871 | INFO     | zombie collector waiting for pid 3950315
[2026-03-10 09:54:30] 2026-03-10 08:53:42,871 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 09:54:30] 2026-03-10 08:53:42,871 | INFO     | collected zombie processes
[2026-03-10 09:54:30] 2026-03-10 08:53:42,871 | INFO     | will attempt to kill all subprocesses of pid=3950315
[2026-03-10 09:54:30] 2026-03-10 08:53:43,689 | INFO     | process IDs to be killed: [3950315] (in reverse order)
[2026-03-10 09:54:30] 2026-03-10 08:53:44,021 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 09:54:30] 2026-03-10 08:53:44,021 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 09:54:30] 2026-03-10 08:53:44,049 | INFO     | did not find any defunct processes belonging to 3950315
[2026-03-10 09:54:30] 2026-03-10 08:53:44,071 | INFO     | did not find any defunct processes belonging to 3950315
[2026-03-10 09:54:30] 2026-03-10 08:53:44,071 | INFO     | ready for new job
[2026-03-10 09:54:30] 2026-03-10 08:53:44,071 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 09:54:30] 2026-03-10 08:53:44,074 | INFO     | **************************************
[2026-03-10 09:54:30] 2026-03-10 08:53:44,074 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 09:54:30] 2026-03-10 08:53:44,074 | INFO     | **************************************
[2026-03-10 09:54:30] 2026-03-10 08:53:44,074 | INFO     | 
[2026-03-10 09:54:30] 2026-03-10 08:53:44,083 | INFO     | architecture information:
[2026-03-10 09:54:30] 2026-03-10 08:53:44,083 | INFO     | executing command: cat /etc/os-release
[2026-03-10 09:54:30] 2026-03-10 08:53:44,124 | INFO     | cat /etc/os-release:
[2026-03-10 09:54:30] NAME="CentOS Linux"
[2026-03-10 09:54:30] VERSION="7 (Core)"
[2026-03-10 09:54:30] ID="centos"
[2026-03-10 09:54:30] ID_LIKE="rhel fedora"
[2026-03-10 09:54:30] VERSION_ID="7"
[2026-03-10 09:54:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 09:54:30] ANSI_COLOR="0;31"
[2026-03-10 09:54:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 09:54:30] HOME_URL="https://www.centos.org/"
[2026-03-10 09:54:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 09:54:30] 
[2026-03-10 09:54:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 09:54:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 09:54:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 09:54:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 09:54:30] 
[2026-03-10 09:54:30] 2026-03-10 08:53:44,125 | INFO     | **************************************
[2026-03-10 09:54:30] 2026-03-10 08:53:44,627 | INFO     | executing command: df -mP /var/lib/boinc/var/slot20/slots/2
[2026-03-10 09:54:30] 2026-03-10 08:53:44,654 | INFO     | sufficient remaining disk space (48424288256 B)
[2026-03-10 09:54:30] 2026-03-10 08:53:44,655 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 09:54:30] 2026-03-10 08:53:44,655 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 09:54:30] 2026-03-10 08:53:44,655 | INFO     | update_server=False
[2026-03-10 09:54:30] 2026-03-10 08:53:44,655 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 09:54:30] 2026-03-10 08:53:44,656 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 09:54:30] 2026-03-10 08:53:44,795 | INFO     | all data control threads have been joined
[2026-03-10 09:54:30] 2026-03-10 08:53:45,597 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 09:54:30] 2026-03-10 08:53:45,597 | INFO     | aborting loop
[2026-03-10 09:54:30] 2026-03-10 08:53:45,660 | INFO     | [job] retrieve thread has finished
[2026-03-10 09:54:30] 2026-03-10 08:53:45,672 | INFO     | [payload] validate_post thread has finished
[2026-03-10 09:54:30] 2026-03-10 08:53:45,699 | INFO     | all payload control threads have been joined
[2026-03-10 09:54:30] 2026-03-10 08:53:45,726 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 09:54:30] 2026-03-10 08:53:45,800 | INFO     | [data] control thread has finished
[2026-03-10 09:54:30] 2026-03-10 08:53:45,804 | INFO     | [job] validate thread has finished
[2026-03-10 09:54:30] 2026-03-10 08:53:45,927 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 09:54:30] 2026-03-10 08:53:45,990 | INFO     | all job control threads have been joined
[2026-03-10 09:54:30] 2026-03-10 08:53:46,471 | INFO     | [payload] failed_post thread has finished
[2026-03-10 09:54:30] 2026-03-10 08:53:46,602 | INFO     | [job] job monitor thread has finished
[2026-03-10 09:54:30] 2026-03-10 08:53:46,643 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 09:54:30] 2026-03-10 08:53:46,643 | INFO     | [data] copytool_in thread has finished
[2026-03-10 09:54:30] 2026-03-10 08:53:46,661 | INFO     | [data] copytool_out thread has finished
[2026-03-10 09:54:30] 2026-03-10 08:53:46,704 | INFO     | [payload] control thread has finished
[2026-03-10 09:54:30] 2026-03-10 08:53:46,790 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 09:54:30] 2026-03-10 08:53:46,995 | INFO     | [job] control thread has finished
[2026-03-10 09:54:30] 2026-03-10 08:53:47,545 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 09:54:30] 2026-03-10 08:53:47,795 | INFO     | [job] queue monitor thread has finished
[2026-03-10 09:54:30] 2026-03-10 08:53:51,550 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 09:54:30] 2026-03-10 08:53:54,909 | INFO     | job.realtimelogging is not enabled
[2026-03-10 09:54:30] 2026-03-10 08:53:55,914 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 09:54:30] 2026-03-10 08:54:14,329 | INFO     | PID=3944222 has CPU usage=12.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-10 09:54:30] 2026-03-10 08:54:14,332 | INFO     | .. there are 30 such processes running
[2026-03-10 09:54:30] 2026-03-10 08:54:14,333 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 09:54:30] 2026-03-10 08:54:14,333 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 09:54:30] 2026-03-10 08:54:14,333 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 09:54:30] 2026-03-10 08:54:24,318 | INFO     | [monitor] cgroup control has ended
[2026-03-10 09:54:30] 2026-03-10 08:54:24,860 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22551760295744)>', '<ExcThread(monitor, started 22551447172864)>']
[2026-03-10 09:54:30] 2026-03-10 08:54:25,396 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 09:54:30] 2026-03-10 08:54:25,396 | INFO     | [monitor] control thread has ended
[2026-03-10 09:54:30] 2026-03-10 08:54:29,885 | INFO     | all workflow threads have been joined
[2026-03-10 09:54:30] 2026-03-10 08:54:29,885 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 09:54:30] 2026-03-10 08:54:29,885 | INFO     | traces error code: 0
[2026-03-10 09:54:30] 2026-03-10 08:54:29,886 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 09:54:30] 2026-03-10 08:54:30,028 [wrapper] ==== pilot stdout END ====
[2026-03-10 09:54:30] 2026-03-10 08:54:30,032 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 09:54:30] 2026-03-10 08:54:30,036 [wrapper] pilotpid: 3944222
[2026-03-10 09:54:30] 2026-03-10 08:54:30,040 [wrapper] Pilot exit status: 0
[2026-03-10 09:54:30] 2026-03-10 08:54:30,059 [wrapper] pandaids: 7047275331
[2026-03-10 09:54:30] 2026-03-10 08:54:30,237 [wrapper] cleanup supervisor_pilot  451552 3944223
[2026-03-10 09:54:30] 2026-03-10 08:54:30,241 [wrapper] Test setup, not cleaning
[2026-03-10 09:54:30] 2026-03-10 08:54:30,246 [wrapper] apfmon messages muted
[2026-03-10 09:54:30] 2026-03-10 08:54:30,250 [wrapper] ==== wrapper stdout END ====
[2026-03-10 09:54:30] 2026-03-10 08:54:30,256 [wrapper] ==== wrapper stderr END ====
[2026-03-10 09:54:30]  *** Error codes and diagnostics ***
[2026-03-10 09:54:30]     "exeErrorCode": 0,
[2026-03-10 09:54:30]     "exeErrorDiag": "",
[2026-03-10 09:54:30]     "pilotErrorCode": 0,
[2026-03-10 09:54:30]     "pilotErrorDiag": "",
[2026-03-10 09:54:30]  *** Listing of results directory ***
[2026-03-10 09:54:30] total 644080
[2026-03-10 09:54:30] -rw-r--r--. 1 boinc boinc    584627 Mar  9 13:35 pilot3.tar.gz
[2026-03-10 09:54:30] -rw-r--r--. 1 boinc boinc      5111 Mar  9 13:39 queuedata.json
[2026-03-10 09:54:30] -rwx------. 1 boinc boinc     36322 Mar  9 13:39 runpilot2-wrapper.sh
[2026-03-10 09:54:30] -rw-r--r--. 1 boinc boinc       100 Mar 10 05:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 09:54:30] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 05:29 run_atlas
[2026-03-10 09:54:30] -rw-r--r--. 1 boinc boinc       105 Mar 10 05:29 job.xml
[2026-03-10 09:54:30] -rw-r--r--. 2 boinc boinc 362207224 Mar 10 05:29 EVNT.48998030._000019.pool.root.1
[2026-03-10 09:54:30] -rw-r--r--. 1 boinc boinc      6617 Mar 10 05:29 init_data.xml
[2026-03-10 09:54:30] -rw-r--r--. 2 boinc boinc     15845 Mar 10 05:29 start_atlas.sh
[2026-03-10 09:54:30] drwxrwx--x. 2 boinc boinc      4096 Mar 10 05:29 shared
[2026-03-10 09:54:30] -rw-r--r--. 2 boinc boinc    597936 Mar 10 05:29 input.tar.gz
[2026-03-10 09:54:30] -rw-r--r--. 1 boinc boinc         0 Mar 10 05:29 boinc_lockfile
[2026-03-10 09:54:30] -rw-r--r--. 1 boinc boinc      2559 Mar 10 05:29 pandaJob.out
[2026-03-10 09:54:30] -rw-------. 1 boinc boinc   1006495 Mar 10 05:29 agis_schedconf.cvmfs.json
[2026-03-10 09:54:30] -rw-------. 1 boinc boinc       443 Mar 10 05:29 workernode_map.json
[2026-03-10 09:54:30] drwx------. 5 boinc boinc      4096 Mar 10 05:29 pilot3
[2026-03-10 09:54:30] -rw-------. 1 boinc boinc 288234389 Mar 10 09:52 HITS.48998032._000458.pool.root.1
[2026-03-10 09:54:30] -rw-r--r--. 1 boinc boinc       531 Mar 10 09:52 boinc_task_state.xml
[2026-03-10 09:54:30] -rw-------. 1 boinc boinc      1028 Mar 10 09:53 memory_monitor_summary.json
[2026-03-10 09:54:30] -rw-------. 1 boinc boinc   1511578 Mar 10 09:53 agis_ddmendpoints.agis.ALL.json
[2026-03-10 09:54:30] -rw-------. 1 boinc boinc    415974 Mar 10 09:53 log.48998032._000458.job.log.tgz.1
[2026-03-10 09:54:30] -rw-------. 1 boinc boinc      6361 Mar 10 09:53 heartbeat.json
[2026-03-10 09:54:30] -rw-------. 1 boinc boinc        95 Mar 10 09:54 pilot_heartbeat.json
[2026-03-10 09:54:30] -rw-r--r--. 1 boinc boinc        28 Mar 10 09:54 wrapper_checkpoint.txt
[2026-03-10 09:54:30] -rw-r--r--. 1 boinc boinc      8192 Mar 10 09:54 boinc_mmap_file
[2026-03-10 09:54:30] -rw-------. 1 boinc boinc      4902 Mar 10 09:54 pilotlog.txt
[2026-03-10 09:54:30] -rw-------. 1 boinc boinc   2162447 Mar 10 09:54 log.48998032._000458.job.log.1
[2026-03-10 09:54:30] -rw-------. 1 boinc boinc       357 Mar 10 09:54 output.list
[2026-03-10 09:54:30] -rw-r--r--. 1 boinc boinc       620 Mar 10 09:54 runtime_log
[2026-03-10 09:54:30] -rw-------. 1 boinc boinc   2600960 Mar 10 09:54 result.tar.gz
[2026-03-10 09:54:30] -rw-r--r--. 1 boinc boinc      9205 Mar 10 09:54 runtime_log.err
[2026-03-10 09:54:30] -rw-------. 1 boinc boinc       666 Mar 10 09:54 XIsKDmH4oJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmjUcLDmVlCPQo.diag
[2026-03-10 09:54:30] -rw-r--r--. 1 boinc boinc     21110 Mar 10 09:54 stderr.txt
[2026-03-10 09:54:30] HITS file was successfully produced:
[2026-03-10 09:54:30] -rw-------. 1 boinc boinc 288234389 Mar 10 09:52 shared/HITS.pool.root.1
[2026-03-10 09:54:30]  *** Contents of shared directory: ***
[2026-03-10 09:54:30] total 638348
[2026-03-10 09:54:30] -rw-r--r--. 2 boinc boinc 362207224 Mar 10 05:29 ATLAS.root_0
[2026-03-10 09:54:30] -rw-r--r--. 2 boinc boinc     15845 Mar 10 05:29 start_atlas.sh
[2026-03-10 09:54:30] -rw-r--r--. 2 boinc boinc    597936 Mar 10 05:29 input.tar.gz
[2026-03-10 09:54:30] -rw-------. 1 boinc boinc 288234389 Mar 10 09:52 HITS.pool.root.1
[2026-03-10 09:54:30] -rw-------. 1 boinc boinc   2600960 Mar 10 09:54 result.tar.gz
09:54:32 (3940183): run_atlas exited; CPU time 59917.595232
09:54:32 (3940183): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN