Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:15:34 (3267483): wrapper (7.7.26015): starting
05:15:34 (3267483): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 05:15:34] Arguments: --nthreads 4
[2026-03-10 05:15:34] Threads: 4
[2026-03-10 05:15:34] Checking for CVMFS
[2026-03-10 05:15:34] No cvmfs_config command found, will try listing directly
[2026-03-10 05:15:34] CVMFS is ok
[2026-03-10 05:15:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 05:15:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 05:15:34] Further information can be found at the LHC@home message board.
[2026-03-10 05:15:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 05:15:34] Checking for apptainer binary...
[2026-03-10 05:15:34] which: no apptainer in ((null))
[2026-03-10 05:15:34] apptainer is not installed, using version from CVMFS
[2026-03-10 05:15:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 05:15:35] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/7/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-10 05:15:35] apptainer works
[2026-03-10 05:15:35] Set ATHENA_PROC_NUMBER=4
[2026-03-10 05:15:35] Set ATHENA_CORE_NUMBER=4
[2026-03-10 05:15:35] Starting ATLAS job with PandaID=7040986546
[2026-03-10 05:15:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 06:31:58]  *** The last 200 lines of the pilot log: ***
[2026-03-10 06:31:58]  protocol_id=None
[2026-03-10 06:31:58]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-10 06:31:58]  replicas=None
[2026-03-10 06:31:58]  scope=mc23_13p6TeV
[2026-03-10 06:31:58]  status=None
[2026-03-10 06:31:58]  status_code=0
[2026-03-10 06:31:58]  storage_token=
[2026-03-10 06:31:58]  surl=/var/lib/boinc/var/slot60/slots/7/PanDA_Pilot-7040986546/log.48955015._009128.job.log.tgz.1
[2026-03-10 06:31:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3b/35/log.48955015._009128.job.log.tgz.1
[2026-03-10 06:31:58]  workdir=None
[2026-03-10 06:31:58] ]
[2026-03-10 06:31:58] 2026-03-10 05:30:53,279 | INFO     | transferring file log.48955015._009128.job.log.tgz.1 from /var/lib/boinc/var/slot60/slots/7/PanDA_Pilot-7040986546/log.48955015._009128.job.log.tgz.1 to /var/lib/b
[2026-03-10 06:31:58] 2026-03-10 05:30:53,279 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot60/slots/7/PanDA_Pilot-7040986546/log.48955015._009128.job.log.tgz.1 /var/lib/boinc/var/slot60/slots/7/lo
[2026-03-10 06:31:58] 2026-03-10 05:30:53,295 | INFO     | adding to output.list: log.48955015._009128.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3b/35/log.48955015._009128.job.log.tg
[2026-03-10 06:31:58] 2026-03-10 05:30:53,296 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 06:31:58] 2026-03-10 05:30:53,296 | INFO     | summary of transferred files:
[2026-03-10 06:31:58] 2026-03-10 05:30:53,296 | INFO     |  -- lfn=log.48955015._009128.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 06:31:58] 2026-03-10 05:30:53,296 | INFO     | stage-out finished correctly
[2026-03-10 06:31:58] 2026-03-10 05:30:54,345 | INFO     | monitor loop #329: job 0:7040986546 is in state 'finished'
[2026-03-10 06:31:58] 2026-03-10 05:30:54,346 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-10 06:31:58] 2026-03-10 05:30:54,508 | INFO     | time since job start (4508s) is within the limit (349056.0s)
[2026-03-10 06:31:58] 2026-03-10 05:30:56,513 | INFO     | time since job start (4510s) is within the limit (349056.0s)
[2026-03-10 06:31:58] 2026-03-10 05:30:56,664 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 06:31:58] 2026-03-10 05:30:56,848 | INFO     | monitor loop #330: job 0:7040986546 is in state 'finished'
[2026-03-10 06:31:58] 2026-03-10 05:30:56,848 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-10 06:31:58] 2026-03-10 05:30:58,518 | INFO     | time since job start (4512s) is within the limit (349056.0s)
[2026-03-10 06:31:58] 2026-03-10 05:30:59,338 | INFO     | job 7040986546 has state=finished
[2026-03-10 06:31:58] 2026-03-10 05:30:59,338 | INFO     | preparing for final server update for job 7040986546 in state='finished'
[2026-03-10 06:31:58] 2026-03-10 05:30:59,338 | INFO     | reading metadata from: /var/lib/boinc/var/slot60/slots/7/PanDA_Pilot-7040986546/jobReport.json
[2026-03-10 06:31:58] 2026-03-10 05:30:59,340 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot60/slots/7/workernode_map.json
[2026-03-10 06:31:58] 2026-03-10 05:30:59,340 | INFO     | this job has now completed (state=finished)
[2026-03-10 06:31:58] 2026-03-10 05:30:59,340 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 06:31:58] 2026-03-10 05:30:59,340 | INFO     | log transfer has been attempted: DONE
[2026-03-10 06:31:58] 2026-03-10 05:30:59,340 | INFO     | job 7040986546 has finished - writing final server update
[2026-03-10 06:31:58] 2026-03-10 05:30:59,341 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1520693/.job.ad'
[2026-03-10 06:31:58] 2026-03-10 05:30:59,341 | INFO     | total number of processed events: 400 (read)
[2026-03-10 06:31:58] 2026-03-10 05:30:59,352 | INFO     | monitor loop #331: job 0:7040986546 is in state 'finished'
[2026-03-10 06:31:58] 2026-03-10 05:30:59,352 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-10 06:31:58] 2026-03-10 05:30:59,359 | INFO     | using path: /var/lib/boinc/var/slot60/slots/7/PanDA_Pilot-7040986546/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 06:31:58] 2026-03-10 05:30:59,359 | INFO     | extracted standard info from prmon json
[2026-03-10 06:31:58] 2026-03-10 05:30:59,359 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 06:31:58] 2026-03-10 05:30:59,359 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 06:31:58] 2026-03-10 05:30:59,359 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 06:31:58] 2026-03-10 05:30:59,359 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 06:31:58] 2026-03-10 05:30:59,360 | INFO     | fitting pss+swap vs Time
[2026-03-10 06:31:58] 2026-03-10 05:30:59,361 | INFO     | sum of square deviations: 93240818.0
[2026-03-10 06:31:58] 2026-03-10 05:30:59,361 | INFO     | sum of deviations: 421920407.99999994
[2026-03-10 06:31:58] 2026-03-10 05:30:59,361 | INFO     | mean x: 1773118483.0
[2026-03-10 06:31:58] 2026-03-10 05:30:59,361 | INFO     | mean y: 2324168.5970149254
[2026-03-10 06:31:58] 2026-03-10 05:30:59,361 | INFO     | intersect: -8021145485.859481
[2026-03-10 06:31:58] 2026-03-10 05:30:59,361 | INFO     | chi2: 0.00010438684192329597
[2026-03-10 06:31:58] 2026-03-10 05:30:59,361 | INFO     | current memory leak: 4.53 B/s (using 67 data points, chi2=0.00)
[2026-03-10 06:31:58] 2026-03-10 05:30:59,361 | INFO     | could have reported an average CPU frequency of 3644 MHz (6 samples)
[2026-03-10 06:31:58] 2026-03-10 05:30:59,361 | INFO     | ..............................
[2026-03-10 06:31:58] 2026-03-10 05:30:59,361 | INFO     | . Timing measurements:
[2026-03-10 06:31:58] 2026-03-10 05:30:59,361 | INFO     | . get job = 0 s
[2026-03-10 06:31:58] 2026-03-10 05:30:59,361 | INFO     | . initial setup = 4 s
[2026-03-10 06:31:58] 2026-03-10 05:30:59,361 | INFO     | . payload setup = 4 s
[2026-03-10 06:31:58] 2026-03-10 05:30:59,361 | INFO     | . stage-in = 0 s
[2026-03-10 06:31:58] 2026-03-10 05:30:59,361 | INFO     | . payload execution = 4487 s
[2026-03-10 06:31:58] 2026-03-10 05:30:59,362 | INFO     | . stage-out = 0 s
[2026-03-10 06:31:58] 2026-03-10 05:30:59,362 | INFO     | . log creation = 0 s
[2026-03-10 06:31:58] 2026-03-10 05:30:59,362 | INFO     | ..............................
[2026-03-10 06:31:58] 2026-03-10 05:30:59,411 | INFO     | 
[2026-03-10 06:31:58] 2026-03-10 05:30:59,411 | INFO     | job summary report
[2026-03-10 06:31:58] 2026-03-10 05:30:59,411 | INFO     | --------------------------------------------------
[2026-03-10 06:31:58] 2026-03-10 05:30:59,411 | INFO     | PanDA job id: 7040986546
[2026-03-10 06:31:58] 2026-03-10 05:30:59,411 | INFO     | task id: 48955015
[2026-03-10 06:31:58] 2026-03-10 05:30:59,411 | INFO     | errors: (none)
[2026-03-10 06:31:58] 2026-03-10 05:30:59,411 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 06:31:58] 2026-03-10 05:30:59,411 | INFO     | pilot state: finished 
[2026-03-10 06:31:58] 2026-03-10 05:30:59,411 | INFO     | transexitcode: 0
[2026-03-10 06:31:58] 2026-03-10 05:30:59,411 | INFO     | exeerrorcode: 0
[2026-03-10 06:31:58] 2026-03-10 05:30:59,411 | INFO     | exeerrordiag: 
[2026-03-10 06:31:58] 2026-03-10 05:30:59,411 | INFO     | exitcode: 0
[2026-03-10 06:31:58] 2026-03-10 05:30:59,411 | INFO     | exitmsg: OK
[2026-03-10 06:31:58] 2026-03-10 05:30:59,411 | INFO     | cpuconsumptiontime: 17245 s
[2026-03-10 06:31:58] 2026-03-10 05:30:59,411 | INFO     | nevents: 400
[2026-03-10 06:31:58] 2026-03-10 05:30:59,411 | INFO     | neventsw: 0
[2026-03-10 06:31:58] 2026-03-10 05:30:59,411 | INFO     | pid: 3286293
[2026-03-10 06:31:58] 2026-03-10 05:30:59,411 | INFO     | pgrp: 3286293
[2026-03-10 06:31:58] 2026-03-10 05:30:59,411 | INFO     | corecount: 4
[2026-03-10 06:31:58] 2026-03-10 05:30:59,411 | INFO     | event service: False
[2026-03-10 06:31:58] 2026-03-10 05:30:59,412 | INFO     | sizes: {0: 2280247, 11: 2280247, 4495: 2306447, 4496: 2315467, 4499: 2315523, 4502: 2315717}
[2026-03-10 06:31:58] 2026-03-10 05:30:59,412 | INFO     | --------------------------------------------------
[2026-03-10 06:31:58] 2026-03-10 05:30:59,412 | INFO     | 
[2026-03-10 06:31:58] 2026-03-10 05:30:59,412 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/7
[2026-03-10 06:31:58] 2026-03-10 05:30:59,434 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 06:31:58] 2026-03-10 05:30:59,435 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 06:31:58] 2026-03-10 05:30:59,435 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 06:31:58] 2026-03-10 05:30:59,435 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 06:31:58] 2026-03-10 05:30:59,435 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 06:31:58] 2026-03-10 05:30:59,435 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 06:31:58] 2026-03-10 05:30:59,435 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 06:31:58] 2026-03-10 05:30:59,435 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 06:31:58] 2026-03-10 05:30:59,435 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 06:31:58] 2026-03-10 05:30:59,435 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 06:31:58] 2026-03-10 05:30:59,435 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 06:31:58] 2026-03-10 05:30:59,435 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 06:31:58] 2026-03-10 05:30:59,435 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 06:31:58] 2026-03-10 05:30:59,435 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 06:31:58] 2026-03-10 05:30:59,435 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 06:31:58] 2026-03-10 05:30:59,435 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 06:31:58] 2026-03-10 05:30:59,435 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 06:31:58] 2026-03-10 05:30:59,435 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 06:31:58] 2026-03-10 05:30:59,435 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 06:31:58] 2026-03-10 05:30:59,435 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 06:31:58] 2026-03-10 05:30:59,435 | INFO     | job 7040986546 has completed (purged errors)
[2026-03-10 06:31:58] 2026-03-10 05:30:59,435 | INFO     | overall cleanup function is called
[2026-03-10 06:31:58] 2026-03-10 05:31:00,439 | INFO     | --- collectZombieJob: --- 10, [3286293]
[2026-03-10 06:31:58] 2026-03-10 05:31:00,439 | INFO     | zombie collector waiting for pid 3286293
[2026-03-10 06:31:58] 2026-03-10 05:31:00,439 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 06:31:58] 2026-03-10 05:31:00,439 | INFO     | collected zombie processes
[2026-03-10 06:31:58] 2026-03-10 05:31:00,439 | INFO     | will attempt to kill all subprocesses of pid=3286293
[2026-03-10 06:31:58] 2026-03-10 05:31:00,857 | INFO     | process IDs to be killed: [3286293] (in reverse order)
[2026-03-10 06:31:58] 2026-03-10 05:31:01,054 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 06:31:58] 2026-03-10 05:31:01,054 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 06:31:58] 2026-03-10 05:31:01,079 | INFO     | did not find any defunct processes belonging to 3286293
[2026-03-10 06:31:58] 2026-03-10 05:31:01,102 | INFO     | did not find any defunct processes belonging to 3286293
[2026-03-10 06:31:58] 2026-03-10 05:31:01,102 | INFO     | ready for new job
[2026-03-10 06:31:58] 2026-03-10 05:31:01,102 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 06:31:58] 2026-03-10 05:31:01,103 | INFO     | **************************************
[2026-03-10 06:31:58] 2026-03-10 05:31:01,103 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 06:31:58] 2026-03-10 05:31:01,103 | INFO     | **************************************
[2026-03-10 06:31:58] 2026-03-10 05:31:01,103 | INFO     | 
[2026-03-10 06:31:58] 2026-03-10 05:31:01,109 | INFO     | architecture information:
[2026-03-10 06:31:58] 2026-03-10 05:31:01,109 | INFO     | executing command: cat /etc/os-release
[2026-03-10 06:31:58] 2026-03-10 05:31:01,123 | INFO     | cat /etc/os-release:
[2026-03-10 06:31:58] NAME="CentOS Linux"
[2026-03-10 06:31:58] VERSION="7 (Core)"
[2026-03-10 06:31:58] ID="centos"
[2026-03-10 06:31:58] ID_LIKE="rhel fedora"
[2026-03-10 06:31:58] VERSION_ID="7"
[2026-03-10 06:31:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 06:31:58] ANSI_COLOR="0;31"
[2026-03-10 06:31:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 06:31:58] HOME_URL="https://www.centos.org/"
[2026-03-10 06:31:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 06:31:58] 
[2026-03-10 06:31:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 06:31:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 06:31:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 06:31:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 06:31:58] 
[2026-03-10 06:31:58] 2026-03-10 05:31:01,123 | INFO     | **************************************
[2026-03-10 06:31:58] 2026-03-10 05:31:01,624 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/7
[2026-03-10 06:31:58] 2026-03-10 05:31:01,643 | INFO     | sufficient remaining disk space (20861419520 B)
[2026-03-10 06:31:58] 2026-03-10 05:31:01,644 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 06:31:58] 2026-03-10 05:31:01,644 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 06:31:58] 2026-03-10 05:31:01,644 | INFO     | update_server=False
[2026-03-10 06:31:58] 2026-03-10 05:31:01,644 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 06:31:58] 2026-03-10 05:31:01,644 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 06:31:58] 2026-03-10 05:31:01,855 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-10 06:31:58] 2026-03-10 05:31:01,855 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-10 06:31:58] 2026-03-10 05:31:01,855 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 06:31:58] 2026-03-10 05:31:01,856 | INFO     | will abort loop
[2026-03-10 06:31:58] 2026-03-10 05:31:02,216 | INFO     | all payload control threads have been joined
[2026-03-10 06:31:58] 2026-03-10 05:31:02,490 | INFO     | all data control threads have been joined
[2026-03-10 06:31:58] 2026-03-10 05:31:02,649 | INFO     | [job] retrieve thread has finished
[2026-03-10 06:31:58] 2026-03-10 05:31:02,695 | INFO     | all job control threads have been joined
[2026-03-10 06:31:58] 2026-03-10 05:31:02,725 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 06:31:58] 2026-03-10 05:31:02,735 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 06:31:58] 2026-03-10 05:31:02,774 | INFO     | [payload] validate_post thread has finished
[2026-03-10 06:31:58] 2026-03-10 05:31:02,860 | INFO     | [job] job monitor thread has finished
[2026-03-10 06:31:58] 2026-03-10 05:31:03,099 | INFO     | [job] validate thread has finished
[2026-03-10 06:31:58] 2026-03-10 05:31:03,221 | INFO     | [payload] control thread has finished
[2026-03-10 06:31:58] 2026-03-10 05:31:03,351 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 06:31:58] 2026-03-10 05:31:03,431 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 06:31:58] 2026-03-10 05:31:03,466 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 06:31:58] 2026-03-10 05:31:03,495 | INFO     | [data] control thread has finished
[2026-03-10 06:31:58] 2026-03-10 05:31:03,496 | INFO     | [data] copytool_in thread has finished
[2026-03-10 06:31:58] 2026-03-10 05:31:03,650 | INFO     | [data] copytool_out thread has finished
[2026-03-10 06:31:58] 2026-03-10 05:31:03,700 | INFO     | [job] control thread has finished
[2026-03-10 06:31:58] 2026-03-10 05:31:03,789 | INFO     | [payload] failed_post thread has finished
[2026-03-10 06:31:58] 2026-03-10 05:31:04,420 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 06:31:58] 2026-03-10 05:31:05,425 | INFO     | [job] queue monitor thread has finished
[2026-03-10 06:31:58] 2026-03-10 05:31:06,730 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 06:31:58] 2026-03-10 05:31:32,062 | INFO     | PID=3273017 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 06:31:58] 2026-03-10 05:31:32,063 | INFO     | .. there are 54 such processes running
[2026-03-10 06:31:58] 2026-03-10 05:31:32,063 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 06:31:58] 2026-03-10 05:31:32,063 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 06:31:58] 2026-03-10 05:31:32,063 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 06:31:58] 2026-03-10 05:31:53,148 | INFO     | [monitor] cgroup control has ended
[2026-03-10 06:31:58] 2026-03-10 05:31:53,306 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22381868230464)>', '<ExcThread(monitor, started 22381631653632)>']
[2026-03-10 06:31:58] 2026-03-10 05:31:54,176 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 06:31:58] 2026-03-10 05:31:54,176 | INFO     | [monitor] control thread has ended
[2026-03-10 06:31:58] 2026-03-10 05:31:58,332 | INFO     | all workflow threads have been joined
[2026-03-10 06:31:58] 2026-03-10 05:31:58,335 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 06:31:58] 2026-03-10 05:31:58,335 | INFO     | traces error code: 0
[2026-03-10 06:31:58] 2026-03-10 05:31:58,335 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 06:31:58] 2026-03-10 05:31:58,448 [wrapper] ==== pilot stdout END ====
[2026-03-10 06:31:58] 2026-03-10 05:31:58,451 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 06:31:58] 2026-03-10 05:31:58,452 [wrapper] pilotpid: 3273017
[2026-03-10 06:31:58] 2026-03-10 05:31:58,454 [wrapper] Pilot exit status: 0
[2026-03-10 06:31:58] 2026-03-10 05:31:58,462 [wrapper] pandaids: 7040986546
[2026-03-10 06:31:58] 2026-03-10 05:31:58,576 [wrapper] cleanup supervisor_pilot    6072 3273018
[2026-03-10 06:31:58] 2026-03-10 05:31:58,579 [wrapper] Test setup, not cleaning
[2026-03-10 06:31:58] 2026-03-10 05:31:58,582 [wrapper] apfmon messages muted
[2026-03-10 06:31:58] 2026-03-10 05:31:58,585 [wrapper] ==== wrapper stdout END ====
[2026-03-10 06:31:58] 2026-03-10 05:31:58,588 [wrapper] ==== wrapper stderr END ====
[2026-03-10 06:31:58]  *** Error codes and diagnostics ***
[2026-03-10 06:31:58]     "exeErrorCode": 0,
[2026-03-10 06:31:58]     "exeErrorDiag": "",
[2026-03-10 06:31:58]     "pilotErrorCode": 0,
[2026-03-10 06:31:58]     "pilotErrorDiag": "",
[2026-03-10 06:31:58]  *** Listing of results directory ***
[2026-03-10 06:31:58] total 617188
[2026-03-10 06:31:58] -rw-r--r--. 1 boinc boinc    584627 Mar  9 17:24 pilot3.tar.gz
[2026-03-10 06:31:58] -rw-r--r--. 1 boinc boinc      5111 Mar  9 17:27 queuedata.json
[2026-03-10 06:31:58] -rwx------. 1 boinc boinc     36322 Mar  9 17:28 runpilot2-wrapper.sh
[2026-03-10 06:31:58] -rw-r--r--. 1 boinc boinc       100 Mar 10 05:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 06:31:58] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 05:15 run_atlas
[2026-03-10 06:31:58] -rw-r--r--. 1 boinc boinc       105 Mar 10 05:15 job.xml
[2026-03-10 06:31:58] -rw-r--r--. 2 boinc boinc 438292648 Mar 10 05:15 EVNT.46701403._002233.pool.root.1
[2026-03-10 06:31:58] -rw-r--r--. 2 boinc boinc     15845 Mar 10 05:15 start_atlas.sh
[2026-03-10 06:31:58] drwxrwx--x. 2 boinc boinc      4096 Mar 10 05:15 shared
[2026-03-10 06:31:58] -rw-r--r--. 2 boinc boinc    597967 Mar 10 05:15 input.tar.gz
[2026-03-10 06:31:58] -rw-r--r--. 1 boinc boinc      6705 Mar 10 05:15 init_data.xml
[2026-03-10 06:31:58] -rw-r--r--. 1 boinc boinc         0 Mar 10 05:15 boinc_lockfile
[2026-03-10 06:31:58] -rw-r--r--. 1 boinc boinc      2571 Mar 10 05:15 pandaJob.out
[2026-03-10 06:31:58] -rw-------. 1 boinc boinc   1006495 Mar 10 05:15 agis_schedconf.cvmfs.json
[2026-03-10 06:31:58] -rw-------. 1 boinc boinc   1511578 Mar 10 05:15 agis_ddmendpoints.agis.ALL.json
[2026-03-10 06:31:58] -rw-------. 1 boinc boinc       444 Mar 10 05:15 workernode_map.json
[2026-03-10 06:31:58] drwx------. 5 boinc boinc      4096 Mar 10 05:15 pilot3
[2026-03-10 06:31:58] -rw-r--r--. 1 boinc boinc       530 Mar 10 06:30 boinc_task_state.xml
[2026-03-10 06:31:58] -rw-------. 1 boinc boinc 187876626 Mar 10 06:30 HITS.48955015._009128.pool.root.1
[2026-03-10 06:31:58] -rw-------. 1 boinc boinc      1032 Mar 10 06:30 memory_monitor_summary.json
[2026-03-10 06:31:58] -rw-------. 1 boinc boinc    275769 Mar 10 06:30 log.48955015._009128.job.log.tgz.1
[2026-03-10 06:31:58] -rw-------. 1 boinc boinc      6353 Mar 10 06:30 heartbeat.json
[2026-03-10 06:31:58] -rw-------. 1 boinc boinc        95 Mar 10 06:31 pilot_heartbeat.json
[2026-03-10 06:31:58] -rw-r--r--. 1 boinc boinc        27 Mar 10 06:31 wrapper_checkpoint.txt
[2026-03-10 06:31:58] -rw-------. 1 boinc boinc      5015 Mar 10 06:31 pilotlog.txt
[2026-03-10 06:31:58] -rw-r--r--. 1 boinc boinc      8192 Mar 10 06:31 boinc_mmap_file
[2026-03-10 06:31:58] -rw-------. 1 boinc boinc    669015 Mar 10 06:31 log.48955015._009128.job.log.1
[2026-03-10 06:31:58] -rw-------. 1 boinc boinc       357 Mar 10 06:31 output.list
[2026-03-10 06:31:58] -rw-r--r--. 1 boinc boinc       620 Mar 10 06:31 runtime_log
[2026-03-10 06:31:58] -rw-------. 1 boinc boinc    962560 Mar 10 06:31 result.tar.gz
[2026-03-10 06:31:58] -rw-r--r--. 1 boinc boinc      9204 Mar 10 06:31 runtime_log.err
[2026-03-10 06:31:58] -rw-------. 1 boinc boinc       662 Mar 10 06:31 EuUMDmldsJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmd5cLDmKmk2xn.diag
[2026-03-10 06:31:58] -rw-r--r--. 1 boinc boinc     21691 Mar 10 06:31 stderr.txt
[2026-03-10 06:31:58] HITS file was successfully produced:
[2026-03-10 06:31:58] -rw-------. 1 boinc boinc 187876626 Mar 10 06:30 shared/HITS.pool.root.1
[2026-03-10 06:31:58]  *** Contents of shared directory: ***
[2026-03-10 06:31:58] total 613048
[2026-03-10 06:31:58] -rw-r--r--. 2 boinc boinc 438292648 Mar 10 05:15 ATLAS.root_0
[2026-03-10 06:31:58] -rw-r--r--. 2 boinc boinc     15845 Mar 10 05:15 start_atlas.sh
[2026-03-10 06:31:58] -rw-r--r--. 2 boinc boinc    597967 Mar 10 05:15 input.tar.gz
[2026-03-10 06:31:58] -rw-------. 1 boinc boinc 187876626 Mar 10 06:30 HITS.pool.root.1
[2026-03-10 06:31:58] -rw-------. 1 boinc boinc    962560 Mar 10 06:31 result.tar.gz
06:32:00 (3267483): run_atlas exited; CPU time 17429.589246
06:32:00 (3267483): called boinc_finish(0)

</stderr_txt>
]]>

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