Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:51:49 (2218078): wrapper (7.7.26015): starting
02:51:49 (2218078): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 02:51:49] Arguments: --nthreads 4
[2026-03-10 02:51:49] Threads: 4
[2026-03-10 02:51:49] Checking for CVMFS
[2026-03-10 02:51:49] No cvmfs_config command found, will try listing directly
[2026-03-10 02:51:49] CVMFS is ok
[2026-03-10 02:51:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 02:51:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 02:51:49] Further information can be found at the LHC@home message board.
[2026-03-10 02:51:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 02:51:49] Checking for apptainer binary...
[2026-03-10 02:51:49] which: no apptainer in ((null))
[2026-03-10 02:51:49] apptainer is not installed, using version from CVMFS
[2026-03-10 02:51:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 02:51:50] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot36/slots/6/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-03-10 02:51:50] apptainer works
[2026-03-10 02:51:50] Set ATHENA_PROC_NUMBER=4
[2026-03-10 02:51:50] Set ATHENA_CORE_NUMBER=4
[2026-03-10 02:51:50] Starting ATLAS job with PandaID=7040899010
[2026-03-10 02:51:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot36/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 04:07:15]  *** The last 200 lines of the pilot log: ***
[2026-03-10 04:07:15]  is_tar=False
[2026-03-10 04:07:15]  lfn=log.48955010._019328.job.log.tgz.1
[2026-03-10 04:07:15]  mtime=0
[2026-03-10 04:07:15]  protocol_id=None
[2026-03-10 04:07:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-10 04:07:15]  replicas=None
[2026-03-10 04:07:15]  scope=mc23_13p6TeV
[2026-03-10 04:07:15]  status=None
[2026-03-10 04:07:15]  status_code=0
[2026-03-10 04:07:15]  storage_token=
[2026-03-10 04:07:15]  surl=/var/lib/boinc/var/slot36/slots/6/PanDA_Pilot-7040899010/log.48955010._019328.job.log.tgz.1
[2026-03-10 04:07:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cc/5d/log.48955010._019328.job.log.tgz.1
[2026-03-10 04:07:15]  workdir=None
[2026-03-10 04:07:15] ]
[2026-03-10 04:07:15] 2026-03-10 03:06:17,729 | INFO     | transferring file log.48955010._019328.job.log.tgz.1 from /var/lib/boinc/var/slot36/slots/6/PanDA_Pilot-7040899010/log.48955010._019328.job.log.tgz.1 to /var/lib/b
[2026-03-10 04:07:15] 2026-03-10 03:06:17,729 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot36/slots/6/PanDA_Pilot-7040899010/log.48955010._019328.job.log.tgz.1 /var/lib/boinc/var/slot36/slots/6/lo
[2026-03-10 04:07:15] 2026-03-10 03:06:17,745 | INFO     | adding to output.list: log.48955010._019328.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cc/5d/log.48955010._019328.job.log.tg
[2026-03-10 04:07:15] 2026-03-10 03:06:17,746 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 04:07:15] 2026-03-10 03:06:17,746 | INFO     | summary of transferred files:
[2026-03-10 04:07:15] 2026-03-10 03:06:17,746 | INFO     |  -- lfn=log.48955010._019328.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 04:07:15] 2026-03-10 03:06:17,746 | INFO     | stage-out finished correctly
[2026-03-10 04:07:15] 2026-03-10 03:06:18,399 | INFO     | time since job start (4456s) is within the limit (349056.0s)
[2026-03-10 04:07:15] 2026-03-10 03:06:19,552 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 04:07:15] 2026-03-10 03:06:20,170 | INFO     | monitor loop #326: job 0:7040899010 is in state 'finished'
[2026-03-10 04:07:15] 2026-03-10 03:06:20,170 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-10 04:07:15] 2026-03-10 03:06:20,343 | INFO     | job 7040899010 has state=finished
[2026-03-10 04:07:15] 2026-03-10 03:06:20,343 | INFO     | preparing for final server update for job 7040899010 in state='finished'
[2026-03-10 04:07:15] 2026-03-10 03:06:20,344 | INFO     | reading metadata from: /var/lib/boinc/var/slot36/slots/6/PanDA_Pilot-7040899010/jobReport.json
[2026-03-10 04:07:15] 2026-03-10 03:06:20,345 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot36/slots/6/workernode_map.json
[2026-03-10 04:07:15] 2026-03-10 03:06:20,345 | INFO     | this job has now completed (state=finished)
[2026-03-10 04:07:15] 2026-03-10 03:06:20,345 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 04:07:15] 2026-03-10 03:06:20,346 | INFO     | log transfer has been attempted: DONE
[2026-03-10 04:07:15] 2026-03-10 03:06:20,346 | INFO     | job 7040899010 has finished - writing final server update
[2026-03-10 04:07:15] 2026-03-10 03:06:20,346 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2924447/.job.ad'
[2026-03-10 04:07:15] 2026-03-10 03:06:20,346 | INFO     | total number of processed events: 400 (read)
[2026-03-10 04:07:15] 2026-03-10 03:06:20,364 | INFO     | using path: /var/lib/boinc/var/slot36/slots/6/PanDA_Pilot-7040899010/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 04:07:15] 2026-03-10 03:06:20,364 | INFO     | extracted standard info from prmon json
[2026-03-10 04:07:15] 2026-03-10 03:06:20,364 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 04:07:15] 2026-03-10 03:06:20,364 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 04:07:15] 2026-03-10 03:06:20,364 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 04:07:15] 2026-03-10 03:06:20,364 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 04:07:15] 2026-03-10 03:06:20,365 | INFO     | fitting pss+swap vs Time
[2026-03-10 04:07:15] 2026-03-10 03:06:20,365 | INFO     | sum of square deviations: 89127252.5
[2026-03-10 04:07:15] 2026-03-10 03:06:20,366 | INFO     | sum of deviations: 376387690.00000006
[2026-03-10 04:07:15] 2026-03-10 03:06:20,366 | INFO     | mean x: 1773109829.5
[2026-03-10 04:07:15] 2026-03-10 03:06:20,366 | INFO     | mean y: 2320311.1818181816
[2026-03-10 04:07:15] 2026-03-10 03:06:20,366 | INFO     | intersect: -7485588203.015891
[2026-03-10 04:07:15] 2026-03-10 03:06:20,366 | INFO     | chi2: 0.00013562817350547588
[2026-03-10 04:07:15] 2026-03-10 03:06:20,366 | INFO     | current memory leak: 4.22 B/s (using 66 data points, chi2=0.00)
[2026-03-10 04:07:15] 2026-03-10 03:06:20,366 | INFO     | could have reported an average CPU frequency of 3579 MHz (6 samples)
[2026-03-10 04:07:15] 2026-03-10 03:06:20,366 | INFO     | ..............................
[2026-03-10 04:07:15] 2026-03-10 03:06:20,366 | INFO     | . Timing measurements:
[2026-03-10 04:07:15] 2026-03-10 03:06:20,366 | INFO     | . get job = 0 s
[2026-03-10 04:07:15] 2026-03-10 03:06:20,366 | INFO     | . initial setup = 4 s
[2026-03-10 04:07:15] 2026-03-10 03:06:20,366 | INFO     | . payload setup = 4 s
[2026-03-10 04:07:15] 2026-03-10 03:06:20,366 | INFO     | . stage-in = 0 s
[2026-03-10 04:07:15] 2026-03-10 03:06:20,366 | INFO     | . payload execution = 4435 s
[2026-03-10 04:07:15] 2026-03-10 03:06:20,366 | INFO     | . stage-out = 0 s
[2026-03-10 04:07:15] 2026-03-10 03:06:20,366 | INFO     | . log creation = 0 s
[2026-03-10 04:07:15] 2026-03-10 03:06:20,366 | INFO     | ..............................
[2026-03-10 04:07:15] 2026-03-10 03:06:20,409 | INFO     | time since job start (4458s) is within the limit (349056.0s)
[2026-03-10 04:07:15] 2026-03-10 03:06:20,423 | INFO     | 
[2026-03-10 04:07:15] 2026-03-10 03:06:20,423 | INFO     | job summary report
[2026-03-10 04:07:15] 2026-03-10 03:06:20,423 | INFO     | --------------------------------------------------
[2026-03-10 04:07:15] 2026-03-10 03:06:20,423 | INFO     | PanDA job id: 7040899010
[2026-03-10 04:07:15] 2026-03-10 03:06:20,423 | INFO     | task id: 48955010
[2026-03-10 04:07:15] 2026-03-10 03:06:20,424 | INFO     | errors: (none)
[2026-03-10 04:07:15] 2026-03-10 03:06:20,424 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 04:07:15] 2026-03-10 03:06:20,424 | INFO     | pilot state: finished 
[2026-03-10 04:07:15] 2026-03-10 03:06:20,424 | INFO     | transexitcode: 0
[2026-03-10 04:07:15] 2026-03-10 03:06:20,424 | INFO     | exeerrorcode: 0
[2026-03-10 04:07:15] 2026-03-10 03:06:20,424 | INFO     | exeerrordiag: 
[2026-03-10 04:07:15] 2026-03-10 03:06:20,424 | INFO     | exitcode: 0
[2026-03-10 04:07:15] 2026-03-10 03:06:20,424 | INFO     | exitmsg: OK
[2026-03-10 04:07:15] 2026-03-10 03:06:20,424 | INFO     | cpuconsumptiontime: 16980 s
[2026-03-10 04:07:15] 2026-03-10 03:06:20,424 | INFO     | nevents: 400
[2026-03-10 04:07:15] 2026-03-10 03:06:20,424 | INFO     | neventsw: 0
[2026-03-10 04:07:15] 2026-03-10 03:06:20,424 | INFO     | pid: 2229251
[2026-03-10 04:07:15] 2026-03-10 03:06:20,424 | INFO     | pgrp: 2229251
[2026-03-10 04:07:15] 2026-03-10 03:06:20,424 | INFO     | corecount: 4
[2026-03-10 04:07:15] 2026-03-10 03:06:20,424 | INFO     | event service: False
[2026-03-10 04:07:15] 2026-03-10 03:06:20,424 | INFO     | sizes: {0: 2280190, 11: 2280190, 4443: 2306363, 4445: 2315383, 4446: 2315439, 4447: 2315633}
[2026-03-10 04:07:15] 2026-03-10 03:06:20,424 | INFO     | --------------------------------------------------
[2026-03-10 04:07:15] 2026-03-10 03:06:20,424 | INFO     | 
[2026-03-10 04:07:15] 2026-03-10 03:06:20,424 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot36/slots/6
[2026-03-10 04:07:15] 2026-03-10 03:06:20,441 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 04:07:15] 2026-03-10 03:06:20,441 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 04:07:15] 2026-03-10 03:06:20,441 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 04:07:15] 2026-03-10 03:06:20,441 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 04:07:15] 2026-03-10 03:06:20,441 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 04:07:15] 2026-03-10 03:06:20,441 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 04:07:15] 2026-03-10 03:06:20,441 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 04:07:15] 2026-03-10 03:06:20,441 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 04:07:15] 2026-03-10 03:06:20,441 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 04:07:15] 2026-03-10 03:06:20,441 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 04:07:15] 2026-03-10 03:06:20,441 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 04:07:15] 2026-03-10 03:06:20,441 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 04:07:15] 2026-03-10 03:06:20,441 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 04:07:15] 2026-03-10 03:06:20,441 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 04:07:15] 2026-03-10 03:06:20,441 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 04:07:15] 2026-03-10 03:06:20,441 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 04:07:15] 2026-03-10 03:06:20,441 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 04:07:15] 2026-03-10 03:06:20,441 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 04:07:15] 2026-03-10 03:06:20,441 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 04:07:15] 2026-03-10 03:06:20,441 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 04:07:15] 2026-03-10 03:06:20,442 | INFO     | job 7040899010 has completed (purged errors)
[2026-03-10 04:07:15] 2026-03-10 03:06:20,442 | INFO     | overall cleanup function is called
[2026-03-10 04:07:15] 2026-03-10 03:06:21,448 | INFO     | --- collectZombieJob: --- 10, [2229251]
[2026-03-10 04:07:15] 2026-03-10 03:06:21,448 | INFO     | zombie collector waiting for pid 2229251
[2026-03-10 04:07:15] 2026-03-10 03:06:21,448 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 04:07:15] 2026-03-10 03:06:21,448 | INFO     | collected zombie processes
[2026-03-10 04:07:15] 2026-03-10 03:06:21,448 | INFO     | will attempt to kill all subprocesses of pid=2229251
[2026-03-10 04:07:15] 2026-03-10 03:06:21,858 | INFO     | process IDs to be killed: [2229251] (in reverse order)
[2026-03-10 04:07:15] 2026-03-10 03:06:22,059 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 04:07:15] 2026-03-10 03:06:22,060 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 04:07:15] 2026-03-10 03:06:22,083 | INFO     | did not find any defunct processes belonging to 2229251
[2026-03-10 04:07:15] 2026-03-10 03:06:22,105 | INFO     | did not find any defunct processes belonging to 2229251
[2026-03-10 04:07:15] 2026-03-10 03:06:22,105 | INFO     | ready for new job
[2026-03-10 04:07:15] 2026-03-10 03:06:22,105 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 04:07:15] 2026-03-10 03:06:22,106 | INFO     | **************************************
[2026-03-10 04:07:15] 2026-03-10 03:06:22,106 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 04:07:15] 2026-03-10 03:06:22,106 | INFO     | **************************************
[2026-03-10 04:07:15] 2026-03-10 03:06:22,106 | INFO     | 
[2026-03-10 04:07:15] 2026-03-10 03:06:22,110 | INFO     | architecture information:
[2026-03-10 04:07:15] 2026-03-10 03:06:22,110 | INFO     | executing command: cat /etc/os-release
[2026-03-10 04:07:15] 2026-03-10 03:06:22,119 | INFO     | cat /etc/os-release:
[2026-03-10 04:07:15] NAME="CentOS Linux"
[2026-03-10 04:07:15] VERSION="7 (Core)"
[2026-03-10 04:07:15] ID="centos"
[2026-03-10 04:07:15] ID_LIKE="rhel fedora"
[2026-03-10 04:07:15] VERSION_ID="7"
[2026-03-10 04:07:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 04:07:15] ANSI_COLOR="0;31"
[2026-03-10 04:07:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 04:07:15] HOME_URL="https://www.centos.org/"
[2026-03-10 04:07:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 04:07:15] 
[2026-03-10 04:07:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 04:07:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 04:07:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 04:07:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 04:07:15] 
[2026-03-10 04:07:15] 2026-03-10 03:06:22,119 | INFO     | **************************************
[2026-03-10 04:07:15] 2026-03-10 03:06:22,621 | INFO     | executing command: df -mP /var/lib/boinc/var/slot36/slots/6
[2026-03-10 04:07:15] 2026-03-10 03:06:22,636 | INFO     | sufficient remaining disk space (20580401152 B)
[2026-03-10 04:07:15] 2026-03-10 03:06:22,637 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 04:07:15] 2026-03-10 03:06:22,637 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 04:07:15] 2026-03-10 03:06:22,637 | INFO     | update_server=False
[2026-03-10 04:07:15] 2026-03-10 03:06:22,637 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 04:07:15] 2026-03-10 03:06:22,673 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-10 04:07:15] 2026-03-10 03:06:22,674 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-10 04:07:15] 2026-03-10 03:06:22,674 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 04:07:15] 2026-03-10 03:06:22,674 | INFO     | will abort loop
[2026-03-10 04:07:15] 2026-03-10 03:06:22,781 | INFO     | all data control threads have been joined
[2026-03-10 04:07:15] 2026-03-10 03:06:23,270 | INFO     | all job control threads have been joined
[2026-03-10 04:07:15] 2026-03-10 03:06:23,303 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 04:07:15] 2026-03-10 03:06:23,642 | INFO     | [job] retrieve thread has finished
[2026-03-10 04:07:15] 2026-03-10 03:06:23,652 | INFO     | [payload] failed_post thread has finished
[2026-03-10 04:07:15] 2026-03-10 03:06:23,679 | INFO     | [job] job monitor thread has finished
[2026-03-10 04:07:15] 2026-03-10 03:06:23,782 | INFO     | [data] control thread has finished
[2026-03-10 04:07:15] 2026-03-10 03:06:23,940 | INFO     | all payload control threads have been joined
[2026-03-10 04:07:15] 2026-03-10 03:06:24,009 | INFO     | [payload] validate_post thread has finished
[2026-03-10 04:07:15] 2026-03-10 03:06:24,276 | INFO     | [job] control thread has finished
[2026-03-10 04:07:15] 2026-03-10 03:06:24,465 | INFO     | [job] validate thread has finished
[2026-03-10 04:07:15] 2026-03-10 03:06:24,665 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 04:07:15] 2026-03-10 03:06:24,665 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 04:07:15] 2026-03-10 03:06:24,844 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 04:07:15] 2026-03-10 03:06:24,949 | INFO     | [payload] control thread has finished
[2026-03-10 04:07:15] 2026-03-10 03:06:24,985 | INFO     | [data] copytool_in thread has finished
[2026-03-10 04:07:15] 2026-03-10 03:06:25,309 | INFO     | [data] copytool_out thread has finished
[2026-03-10 04:07:15] 2026-03-10 03:06:25,423 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 04:07:15] 2026-03-10 03:06:25,604 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 04:07:15] 2026-03-10 03:06:26,428 | INFO     | [job] queue monitor thread has finished
[2026-03-10 04:07:15] 2026-03-10 03:06:29,609 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 04:07:15] 2026-03-10 03:06:32,795 | INFO     | job.realtimelogging is not enabled
[2026-03-10 04:07:15] 2026-03-10 03:06:33,800 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 04:07:15] 2026-03-10 03:06:53,987 | INFO     | PID=2223431 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 04:07:15] 2026-03-10 03:06:53,987 | INFO     | .. there are 58 such processes running
[2026-03-10 04:07:15] 2026-03-10 03:06:53,988 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 04:07:15] 2026-03-10 03:06:53,988 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 04:07:15] 2026-03-10 03:06:53,988 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 04:07:15] 2026-03-10 03:06:56,601 [wrapper] supervise_pilot (15 min periods counter: 6)
[2026-03-10 04:07:15] 2026-03-10 03:07:08,944 | INFO     | [monitor] cgroup control has ended
[2026-03-10 04:07:15] 2026-03-10 03:07:09,949 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22869169149760)>', '<ExcThread(monitor, started 22868934280960)>']
[2026-03-10 04:07:15] 2026-03-10 03:07:10,069 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 04:07:15] 2026-03-10 03:07:10,070 | INFO     | [monitor] control thread has ended
[2026-03-10 04:07:15] 2026-03-10 03:07:14,967 | INFO     | all workflow threads have been joined
[2026-03-10 04:07:15] 2026-03-10 03:07:14,967 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 04:07:15] 2026-03-10 03:07:14,968 | INFO     | traces error code: 0
[2026-03-10 04:07:15] 2026-03-10 03:07:14,968 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 04:07:15] 2026-03-10 03:07:15,119 [wrapper] ==== pilot stdout END ====
[2026-03-10 04:07:15] 2026-03-10 03:07:15,127 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 04:07:15] 2026-03-10 03:07:15,130 [wrapper] pilotpid: 2223431
[2026-03-10 04:07:15] 2026-03-10 03:07:15,132 [wrapper] Pilot exit status: 0
[2026-03-10 04:07:15] 2026-03-10 03:07:15,142 [wrapper] pandaids: 7040899010
[2026-03-10 04:07:15] 2026-03-10 03:07:15,255 [wrapper] cleanup supervisor_pilot 3077994 2223432
[2026-03-10 04:07:15] 2026-03-10 03:07:15,258 [wrapper] Test setup, not cleaning
[2026-03-10 04:07:15] 2026-03-10 03:07:15,260 [wrapper] apfmon messages muted
[2026-03-10 04:07:15] 2026-03-10 03:07:15,262 [wrapper] ==== wrapper stdout END ====
[2026-03-10 04:07:15] 2026-03-10 03:07:15,267 [wrapper] ==== wrapper stderr END ====
[2026-03-10 04:07:15]  *** Error codes and diagnostics ***
[2026-03-10 04:07:15]     "exeErrorCode": 0,
[2026-03-10 04:07:15]     "exeErrorDiag": "",
[2026-03-10 04:07:15]     "pilotErrorCode": 0,
[2026-03-10 04:07:15]     "pilotErrorDiag": "",
[2026-03-10 04:07:15]  *** Listing of results directory ***
[2026-03-10 04:07:15] total 610988
[2026-03-10 04:07:15] -rw-r--r--. 1 boinc boinc    584627 Mar  9 17:24 pilot3.tar.gz
[2026-03-10 04:07:15] -rw-r--r--. 1 boinc boinc      5111 Mar  9 17:27 queuedata.json
[2026-03-10 04:07:15] -rwx------. 1 boinc boinc     36322 Mar  9 17:28 runpilot2-wrapper.sh
[2026-03-10 04:07:15] -rw-r--r--. 1 boinc boinc       100 Mar 10 02:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 04:07:15] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 02:51 run_atlas
[2026-03-10 04:07:15] -rw-r--r--. 1 boinc boinc       105 Mar 10 02:51 job.xml
[2026-03-10 04:07:15] -rw-r--r--. 1 boinc boinc      6705 Mar 10 02:51 init_data.xml
[2026-03-10 04:07:15] -rw-r--r--. 2 boinc boinc 436572081 Mar 10 02:51 EVNT.46701403._001386.pool.root.1
[2026-03-10 04:07:15] -rw-r--r--. 2 boinc boinc     15845 Mar 10 02:51 start_atlas.sh
[2026-03-10 04:07:15] drwxrwx--x. 2 boinc boinc      4096 Mar 10 02:51 shared
[2026-03-10 04:07:15] -rw-r--r--. 2 boinc boinc    597961 Mar 10 02:51 input.tar.gz
[2026-03-10 04:07:15] -rw-r--r--. 1 boinc boinc         0 Mar 10 02:51 boinc_lockfile
[2026-03-10 04:07:15] -rw-r--r--. 1 boinc boinc      2563 Mar 10 02:51 pandaJob.out
[2026-03-10 04:07:15] -rw-------. 1 boinc boinc   1002338 Mar 10 02:51 agis_schedconf.cvmfs.json
[2026-03-10 04:07:15] -rw-------. 1 boinc boinc   1511578 Mar 10 02:51 agis_ddmendpoints.agis.ALL.json
[2026-03-10 04:07:15] -rw-------. 1 boinc boinc       442 Mar 10 02:52 workernode_map.json
[2026-03-10 04:07:15] drwx------. 5 boinc boinc      4096 Mar 10 02:52 pilot3
[2026-03-10 04:07:15] -rw-------. 1 boinc boinc 183256462 Mar 10 04:05 HITS.48955010._019328.pool.root.1
[2026-03-10 04:07:15] -rw-r--r--. 1 boinc boinc       530 Mar 10 04:06 boinc_task_state.xml
[2026-03-10 04:07:15] -rw-------. 1 boinc boinc      1030 Mar 10 04:06 memory_monitor_summary.json
[2026-03-10 04:07:15] -rw-------. 1 boinc boinc    283436 Mar 10 04:06 log.48955010._019328.job.log.tgz.1
[2026-03-10 04:07:15] -rw-------. 1 boinc boinc      6349 Mar 10 04:06 heartbeat.json
[2026-03-10 04:07:15] -rw-------. 1 boinc boinc        95 Mar 10 04:06 pilot_heartbeat.json
[2026-03-10 04:07:15] -rw-r--r--. 1 boinc boinc      8192 Mar 10 04:07 boinc_mmap_file
[2026-03-10 04:07:15] -rw-r--r--. 1 boinc boinc        27 Mar 10 04:07 wrapper_checkpoint.txt
[2026-03-10 04:07:15] -rw-------. 1 boinc boinc      5087 Mar 10 04:07 pilotlog.txt
[2026-03-10 04:07:15] -rw-------. 1 boinc boinc    661175 Mar 10 04:07 log.48955010._019328.job.log.1
[2026-03-10 04:07:15] -rw-------. 1 boinc boinc       357 Mar 10 04:07 output.list
[2026-03-10 04:07:15] -rw-r--r--. 1 boinc boinc       620 Mar 10 04:07 runtime_log
[2026-03-10 04:07:15] -rw-------. 1 boinc boinc    962560 Mar 10 04:07 result.tar.gz
[2026-03-10 04:07:15] -rw-r--r--. 1 boinc boinc      9204 Mar 10 04:07 runtime_log.err
[2026-03-10 04:07:15] -rw-------. 1 boinc boinc       662 Mar 10 04:07 HV0MDmkdsJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmCRaLDmNWBBum.diag
[2026-03-10 04:07:15] -rw-r--r--. 1 boinc boinc     21380 Mar 10 04:07 stderr.txt
[2026-03-10 04:07:15] HITS file was successfully produced:
[2026-03-10 04:07:15] -rw-------. 1 boinc boinc 183256462 Mar 10 04:05 shared/HITS.pool.root.1
[2026-03-10 04:07:15]  *** Contents of shared directory: ***
[2026-03-10 04:07:15] total 606852
[2026-03-10 04:07:15] -rw-r--r--. 2 boinc boinc 436572081 Mar 10 02:51 ATLAS.root_0
[2026-03-10 04:07:15] -rw-r--r--. 2 boinc boinc     15845 Mar 10 02:51 start_atlas.sh
[2026-03-10 04:07:15] -rw-r--r--. 2 boinc boinc    597961 Mar 10 02:51 input.tar.gz
[2026-03-10 04:07:15] -rw-------. 1 boinc boinc 183256462 Mar 10 04:05 HITS.pool.root.1
[2026-03-10 04:07:15] -rw-------. 1 boinc boinc    962560 Mar 10 04:07 result.tar.gz
04:07:16 (2218078): run_atlas exited; CPU time 17165.275116
04:07:16 (2218078): called boinc_finish(0)

</stderr_txt>
]]>

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