Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:44:57 (46021): wrapper (7.7.26015): starting
03:44:57 (46021): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 03:44:57] Arguments: --nthreads 4
[2026-03-10 03:44:57] Threads: 4
[2026-03-10 03:44:57] Checking for CVMFS
[2026-03-10 03:44:57] No cvmfs_config command found, will try listing directly
[2026-03-10 03:44:57] CVMFS is ok
[2026-03-10 03:44:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 03:44:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 03:44:57] Further information can be found at the LHC@home message board.
[2026-03-10 03:44:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 03:44:57] Checking for apptainer binary...
[2026-03-10 03:44:57] which: no apptainer in ((null))
[2026-03-10 03:44:57] apptainer is not installed, using version from CVMFS
[2026-03-10 03:44:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 03:44:58] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot16/slots/5/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-03-10 03:44:58] apptainer works
[2026-03-10 03:44:58] Set ATHENA_PROC_NUMBER=4
[2026-03-10 03:44:58] Set ATHENA_CORE_NUMBER=4
[2026-03-10 03:44:58] Starting ATLAS job with PandaID=7047275358
[2026-03-10 03:44:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot16/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 08:04:54]  *** The last 200 lines of the pilot log: ***
[2026-03-10 08:04:54] 2026-03-10 07:04:00,436 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1934772/.job.ad'
[2026-03-10 08:04:54] 2026-03-10 07:04:00,436 | INFO     | total number of processed events: 400 (read)
[2026-03-10 08:04:54] 2026-03-10 07:04:00,472 | INFO     | using path: /var/lib/boinc/var/slot16/slots/5/PanDA_Pilot-7047275358/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 08:04:54] 2026-03-10 07:04:00,473 | INFO     | extracted standard info from prmon json
[2026-03-10 08:04:54] 2026-03-10 07:04:00,473 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 08:04:54] 2026-03-10 07:04:00,473 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 08:04:54] 2026-03-10 07:04:00,473 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 08:04:54] 2026-03-10 07:04:00,473 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 08:04:54] 2026-03-10 07:04:00,478 | INFO     | fitting pss+swap vs Time
[2026-03-10 08:04:54] 2026-03-10 07:04:00,479 | INFO     | sum of square deviations: 5081276667.5
[2026-03-10 08:04:54] 2026-03-10 07:04:00,481 | INFO     | sum of deviations: 38298724034.99999
[2026-03-10 08:04:54] 2026-03-10 07:04:00,481 | INFO     | mean x: 1773118469.5
[2026-03-10 08:04:54] 2026-03-10 07:04:00,481 | INFO     | mean y: 2347344.7637795275
[2026-03-10 08:04:54] 2026-03-10 07:04:00,481 | INFO     | intersect: -13362044989.762072
[2026-03-10 08:04:54] 2026-03-10 07:04:00,482 | INFO     | chi2: 1.378549537575423
[2026-03-10 08:04:54] 2026-03-10 07:04:00,482 | INFO     | sum of square deviations: 4787066500.0
[2026-03-10 08:04:54] 2026-03-10 07:04:00,484 | INFO     | sum of deviations: 37387613821.99999
[2026-03-10 08:04:54] 2026-03-10 07:04:00,484 | INFO     | mean x: 1773118317.0
[2026-03-10 08:04:54] 2026-03-10 07:04:00,484 | INFO     | mean y: 2346872.4698795183
[2026-03-10 08:04:54] 2026-03-10 07:04:00,484 | INFO     | intersect: -13845938480.723055
[2026-03-10 08:04:54] 2026-03-10 07:04:00,485 | INFO     | chi2: 1.3789898261647546
[2026-03-10 08:04:54] 2026-03-10 07:04:00,485 | INFO     | current chi2=1.3789898261647546 (change=-0.03193853955411086 %)
[2026-03-10 08:04:54] 2026-03-10 07:04:00,485 | INFO     | right removable region: 248
[2026-03-10 08:04:54] 2026-03-10 07:04:00,485 | INFO     | sum of square deviations: 4787066500.0
[2026-03-10 08:04:54] 2026-03-10 07:04:00,487 | INFO     | sum of deviations: 3367552946.0
[2026-03-10 08:04:54] 2026-03-10 07:04:00,487 | INFO     | mean x: 1773118622.0
[2026-03-10 08:04:54] 2026-03-10 07:04:00,487 | INFO     | mean y: 2365280.859437751
[2026-03-10 08:04:54] 2026-03-10 07:04:00,488 | INFO     | intersect: -1244968726.1203191
[2026-03-10 08:04:54] 2026-03-10 07:04:00,488 | INFO     | chi2: 0.006455512128880909
[2026-03-10 08:04:54] 2026-03-10 07:04:00,488 | INFO     | current chi2=0.006455512128880909 (change=99.53171707269695 %)
[2026-03-10 08:04:54] 2026-03-10 07:04:00,488 | INFO     | sum of square deviations: 4504437945.0
[2026-03-10 08:04:54] 2026-03-10 07:04:00,490 | INFO     | sum of deviations: 2291202974.4999995
[2026-03-10 08:04:54] 2026-03-10 07:04:00,490 | INFO     | mean x: 1773118774.5
[2026-03-10 08:04:54] 2026-03-10 07:04:00,490 | INFO     | mean y: 2365849.348360656
[2026-03-10 08:04:54] 2026-03-10 07:04:00,491 | INFO     | intersect: -899539129.6703243
[2026-03-10 08:04:54] 2026-03-10 07:04:00,491 | INFO     | chi2: 0.002376982642497523
[2026-03-10 08:04:54] 2026-03-10 07:04:00,491 | INFO     | current chi2=0.002376982642497523 (change=63.17902290256276 %)
[2026-03-10 08:04:54] 2026-03-10 07:04:00,491 | INFO     | sum of square deviations: 4233158440.0
[2026-03-10 08:04:54] 2026-03-10 07:04:00,493 | INFO     | sum of deviations: 2881540509.0
[2026-03-10 08:04:54] 2026-03-10 07:04:00,493 | INFO     | mean x: 1773118927.0
[2026-03-10 08:04:54] 2026-03-10 07:04:00,493 | INFO     | mean y: 2365517.418410042
[2026-03-10 08:04:54] 2026-03-10 07:04:00,493 | INFO     | intersect: -1204608917.3549583
[2026-03-10 08:04:54] 2026-03-10 07:04:00,494 | INFO     | chi2: 0.0019930169279931444
[2026-03-10 08:04:54] 2026-03-10 07:04:00,494 | INFO     | current chi2=0.0019930169279931444 (change=16.153492568247856 %)
[2026-03-10 08:04:54] 2026-03-10 07:04:00,494 | INFO     | left removable region: 30
[2026-03-10 08:04:54] 2026-03-10 07:04:00,494 | INFO     | sum of square deviations: 3212467674.5
[2026-03-10 08:04:54] 2026-03-10 07:04:00,496 | INFO     | sum of deviations: 3575624495.0
[2026-03-10 08:04:54] 2026-03-10 07:04:00,496 | INFO     | mean x: 1773119201.5
[2026-03-10 08:04:54] 2026-03-10 07:04:00,496 | INFO     | mean y: 2364827.146788991
[2026-03-10 08:04:54] 2026-03-10 07:04:00,496 | INFO     | intersect: -1971198517.8680437
[2026-03-10 08:04:54] 2026-03-10 07:04:00,497 | INFO     | chi2: 0.00018682845044434493
[2026-03-10 08:04:54] 2026-03-10 07:04:00,497 | INFO     | current memory leak: 1.11 B/s (using 218 data points, chi2=0.00)
[2026-03-10 08:04:54] 2026-03-10 07:04:00,498 | INFO     | could have reported an average CPU frequency of 2704 MHz (12 samples)
[2026-03-10 08:04:54] 2026-03-10 07:04:00,498 | INFO     | ..............................
[2026-03-10 08:04:54] 2026-03-10 07:04:00,498 | INFO     | . Timing measurements:
[2026-03-10 08:04:54] 2026-03-10 07:04:00,498 | INFO     | . get job = 0 s
[2026-03-10 08:04:54] 2026-03-10 07:04:00,498 | INFO     | . initial setup = 8 s
[2026-03-10 08:04:54] 2026-03-10 07:04:00,498 | INFO     | . payload setup = 11 s
[2026-03-10 08:04:54] 2026-03-10 07:04:00,498 | INFO     | . stage-in = 0 s
[2026-03-10 08:04:54] 2026-03-10 07:04:00,499 | INFO     | . payload execution = 15486 s
[2026-03-10 08:04:54] 2026-03-10 07:04:00,499 | INFO     | . stage-out = 1 s
[2026-03-10 08:04:54] 2026-03-10 07:04:00,499 | INFO     | . log creation = 0 s
[2026-03-10 08:04:54] 2026-03-10 07:04:00,499 | INFO     | ..............................
[2026-03-10 08:04:54] 2026-03-10 07:04:00,599 | INFO     | 
[2026-03-10 08:04:54] 2026-03-10 07:04:00,600 | INFO     | job summary report
[2026-03-10 08:04:54] 2026-03-10 07:04:00,600 | INFO     | --------------------------------------------------
[2026-03-10 08:04:54] 2026-03-10 07:04:00,600 | INFO     | PanDA job id: 7047275358
[2026-03-10 08:04:54] 2026-03-10 07:04:00,600 | INFO     | task id: 48998032
[2026-03-10 08:04:54] 2026-03-10 07:04:00,600 | INFO     | errors: (none)
[2026-03-10 08:04:54] 2026-03-10 07:04:00,600 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 08:04:54] 2026-03-10 07:04:00,600 | INFO     | pilot state: finished 
[2026-03-10 08:04:54] 2026-03-10 07:04:00,601 | INFO     | transexitcode: 0
[2026-03-10 08:04:54] 2026-03-10 07:04:00,601 | INFO     | exeerrorcode: 0
[2026-03-10 08:04:54] 2026-03-10 07:04:00,601 | INFO     | exeerrordiag: 
[2026-03-10 08:04:54] 2026-03-10 07:04:00,601 | INFO     | exitcode: 0
[2026-03-10 08:04:54] 2026-03-10 07:04:00,601 | INFO     | exitmsg: OK
[2026-03-10 08:04:54] 2026-03-10 07:04:00,601 | INFO     | cpuconsumptiontime: 58313 s
[2026-03-10 08:04:54] 2026-03-10 07:04:00,601 | INFO     | nevents: 400
[2026-03-10 08:04:54] 2026-03-10 07:04:00,602 | INFO     | neventsw: 0
[2026-03-10 08:04:54] 2026-03-10 07:04:00,602 | INFO     | pid: 66774
[2026-03-10 08:04:54] 2026-03-10 07:04:00,602 | INFO     | pgrp: 66774
[2026-03-10 08:04:54] 2026-03-10 07:04:00,602 | INFO     | corecount: 4
[2026-03-10 08:04:54] 2026-03-10 07:04:00,602 | INFO     | event service: False
[2026-03-10 08:04:54] 2026-03-10 07:04:00,602 | INFO     | sizes: {0: 2280034, 1: 2280240, 11: 2280268, 15501: 2312111, 15502: 2321131, 15506: 2321187, 15508: 2321537}
[2026-03-10 08:04:54] 2026-03-10 07:04:00,602 | INFO     | --------------------------------------------------
[2026-03-10 08:04:54] 2026-03-10 07:04:00,602 | INFO     | 
[2026-03-10 08:04:54] 2026-03-10 07:04:00,602 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot16/slots/5
[2026-03-10 08:04:54] 2026-03-10 07:04:00,642 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 08:04:54] 2026-03-10 07:04:00,642 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 08:04:54] 2026-03-10 07:04:00,643 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 08:04:54] 2026-03-10 07:04:00,643 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 08:04:54] 2026-03-10 07:04:00,643 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 08:04:54] 2026-03-10 07:04:00,643 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 08:04:54] 2026-03-10 07:04:00,643 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 08:04:54] 2026-03-10 07:04:00,643 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 08:04:54] 2026-03-10 07:04:00,643 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 08:04:54] 2026-03-10 07:04:00,643 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 08:04:54] 2026-03-10 07:04:00,643 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 08:04:54] 2026-03-10 07:04:00,643 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 08:04:54] 2026-03-10 07:04:00,644 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 08:04:54] 2026-03-10 07:04:00,644 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 08:04:54] 2026-03-10 07:04:00,644 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 08:04:54] 2026-03-10 07:04:00,644 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 08:04:54] 2026-03-10 07:04:00,644 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 08:04:54] 2026-03-10 07:04:00,644 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 08:04:54] 2026-03-10 07:04:00,644 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 08:04:54] 2026-03-10 07:04:00,644 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 08:04:54] 2026-03-10 07:04:00,644 | INFO     | job 7047275358 has completed (purged errors)
[2026-03-10 08:04:54] 2026-03-10 07:04:00,645 | INFO     | overall cleanup function is called
[2026-03-10 08:04:54] 2026-03-10 07:04:00,844 | INFO     | PID=54222 has CPU usage=22.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-10 08:04:54] 2026-03-10 07:04:00,845 | INFO     | .. there are 30 such processes running
[2026-03-10 08:04:54] 2026-03-10 07:04:01,655 | INFO     | --- collectZombieJob: --- 10, [66774]
[2026-03-10 08:04:54] 2026-03-10 07:04:01,655 | INFO     | zombie collector waiting for pid 66774
[2026-03-10 08:04:54] 2026-03-10 07:04:01,655 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 08:04:54] 2026-03-10 07:04:01,655 | INFO     | collected zombie processes
[2026-03-10 08:04:54] 2026-03-10 07:04:01,655 | INFO     | will attempt to kill all subprocesses of pid=66774
[2026-03-10 08:04:54] 2026-03-10 07:04:02,430 | INFO     | process IDs to be killed: [66774] (in reverse order)
[2026-03-10 08:04:54] 2026-03-10 07:04:02,752 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 08:04:54] 2026-03-10 07:04:02,752 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 08:04:54] 2026-03-10 07:04:02,780 | INFO     | did not find any defunct processes belonging to 66774
[2026-03-10 08:04:54] 2026-03-10 07:04:02,803 | INFO     | did not find any defunct processes belonging to 66774
[2026-03-10 08:04:54] 2026-03-10 07:04:02,803 | INFO     | ready for new job
[2026-03-10 08:04:54] 2026-03-10 07:04:02,804 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 08:04:54] 2026-03-10 07:04:02,806 | INFO     | **************************************
[2026-03-10 08:04:54] 2026-03-10 07:04:02,806 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 08:04:54] 2026-03-10 07:04:02,807 | INFO     | **************************************
[2026-03-10 08:04:54] 2026-03-10 07:04:02,807 | INFO     | 
[2026-03-10 08:04:54] 2026-03-10 07:04:02,815 | INFO     | architecture information:
[2026-03-10 08:04:54] 2026-03-10 07:04:02,815 | INFO     | executing command: cat /etc/os-release
[2026-03-10 08:04:54] 2026-03-10 07:04:02,840 | INFO     | cat /etc/os-release:
[2026-03-10 08:04:54] NAME="CentOS Linux"
[2026-03-10 08:04:54] VERSION="7 (Core)"
[2026-03-10 08:04:54] ID="centos"
[2026-03-10 08:04:54] ID_LIKE="rhel fedora"
[2026-03-10 08:04:54] VERSION_ID="7"
[2026-03-10 08:04:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 08:04:54] ANSI_COLOR="0;31"
[2026-03-10 08:04:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 08:04:54] HOME_URL="https://www.centos.org/"
[2026-03-10 08:04:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 08:04:54] 
[2026-03-10 08:04:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 08:04:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 08:04:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 08:04:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 08:04:54] 
[2026-03-10 08:04:54] 2026-03-10 07:04:02,841 | INFO     | **************************************
[2026-03-10 08:04:54] 2026-03-10 07:04:03,343 | INFO     | executing command: df -mP /var/lib/boinc/var/slot16/slots/5
[2026-03-10 08:04:54] 2026-03-10 07:04:03,371 | INFO     | sufficient remaining disk space (46305116160 B)
[2026-03-10 08:04:54] 2026-03-10 07:04:03,372 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 08:04:54] 2026-03-10 07:04:03,372 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 08:04:54] 2026-03-10 07:04:03,372 | INFO     | update_server=False
[2026-03-10 08:04:54] 2026-03-10 07:04:03,372 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 08:04:54] 2026-03-10 07:04:03,372 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 08:04:54] 2026-03-10 07:04:03,373 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 08:04:54] 2026-03-10 07:04:03,373 | INFO     | aborting loop
[2026-03-10 08:04:54] 2026-03-10 07:04:03,560 | INFO     | all job control threads have been joined
[2026-03-10 08:04:54] 2026-03-10 07:04:04,164 | INFO     | all data control threads have been joined
[2026-03-10 08:04:54] 2026-03-10 07:04:04,377 | INFO     | [job] retrieve thread has finished
[2026-03-10 08:04:54] 2026-03-10 07:04:04,379 | INFO     | [job] job monitor thread has finished
[2026-03-10 08:04:54] 2026-03-10 07:04:04,560 | INFO     | [payload] validate_post thread has finished
[2026-03-10 08:04:54] 2026-03-10 07:04:04,565 | INFO     | [job] control thread has finished
[2026-03-10 08:04:54] 2026-03-10 07:04:04,584 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 08:04:54] 2026-03-10 07:04:04,651 | INFO     | [data] copytool_in thread has finished
[2026-03-10 08:04:54] 2026-03-10 07:04:04,751 | INFO     | [job] validate thread has finished
[2026-03-10 08:04:54] 2026-03-10 07:04:04,775 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 08:04:54] 2026-03-10 07:04:04,820 | INFO     | all payload control threads have been joined
[2026-03-10 08:04:54] 2026-03-10 07:04:05,172 | INFO     | [data] control thread has finished
[2026-03-10 08:04:54] 2026-03-10 07:04:05,365 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 08:04:54] 2026-03-10 07:04:05,379 | INFO     | [data] copytool_out thread has finished
[2026-03-10 08:04:54] 2026-03-10 07:04:05,468 | INFO     | [payload] failed_post thread has finished
[2026-03-10 08:04:54] 2026-03-10 07:04:05,609 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 08:04:54] 2026-03-10 07:04:05,692 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 08:04:54] 2026-03-10 07:04:05,808 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 08:04:54] 2026-03-10 07:04:05,825 | INFO     | [payload] control thread has finished
[2026-03-10 08:04:54] 2026-03-10 07:04:06,614 | INFO     | [job] queue monitor thread has finished
[2026-03-10 08:04:54] 2026-03-10 07:04:08,781 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 08:04:54] 2026-03-10 07:04:33,730 | INFO     | PID=54222 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-10 08:04:54] 2026-03-10 07:04:33,730 | INFO     | .. there are 30 such processes running
[2026-03-10 08:04:54] 2026-03-10 07:04:33,731 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 08:04:54] 2026-03-10 07:04:33,731 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 08:04:54] 2026-03-10 07:04:33,731 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 08:04:54] 2026-03-10 07:04:47,202 | INFO     | [monitor] cgroup control has ended
[2026-03-10 08:04:54] 2026-03-10 07:04:48,891 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22553139136320)>', '<ExcThread(monitor, started 22552893454080)>']
[2026-03-10 08:04:54] 2026-03-10 07:04:49,811 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 08:04:54] 2026-03-10 07:04:49,811 | INFO     | [monitor] control thread has ended
[2026-03-10 08:04:54] 2026-03-10 07:04:53,916 | INFO     | all workflow threads have been joined
[2026-03-10 08:04:54] 2026-03-10 07:04:53,916 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 08:04:54] 2026-03-10 07:04:53,916 | INFO     | traces error code: 0
[2026-03-10 08:04:54] 2026-03-10 07:04:53,917 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 08:04:54] 2026-03-10 07:04:54,060 [wrapper] ==== pilot stdout END ====
[2026-03-10 08:04:54] 2026-03-10 07:04:54,065 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 08:04:54] 2026-03-10 07:04:54,068 [wrapper] pilotpid: 54222
[2026-03-10 08:04:54] 2026-03-10 07:04:54,072 [wrapper] Pilot exit status: 0
[2026-03-10 08:04:54] 2026-03-10 07:04:54,090 [wrapper] pandaids: 7047275358
[2026-03-10 08:04:54] 2026-03-10 07:04:54,269 [wrapper] cleanup supervisor_pilot  702020 54223
[2026-03-10 08:04:54] 2026-03-10 07:04:54,274 [wrapper] Test setup, not cleaning
[2026-03-10 08:04:54] 2026-03-10 07:04:54,281 [wrapper] apfmon messages muted
[2026-03-10 08:04:54] 2026-03-10 07:04:54,286 [wrapper] ==== wrapper stdout END ====
[2026-03-10 08:04:54] 2026-03-10 07:04:54,289 [wrapper] ==== wrapper stderr END ====
[2026-03-10 08:04:54]  *** Error codes and diagnostics ***
[2026-03-10 08:04:54]     "exeErrorCode": 0,
[2026-03-10 08:04:54]     "exeErrorDiag": "",
[2026-03-10 08:04:54]     "pilotErrorCode": 0,
[2026-03-10 08:04:54]     "pilotErrorDiag": "",
[2026-03-10 08:04:54]  *** Listing of results directory ***
[2026-03-10 08:04:54] total 642244
[2026-03-10 08:04:54] -rw-r--r--. 1 boinc boinc    584627 Mar  9 13:35 pilot3.tar.gz
[2026-03-10 08:04:54] -rw-r--r--. 1 boinc boinc      5111 Mar  9 13:39 queuedata.json
[2026-03-10 08:04:54] -rwx------. 1 boinc boinc     36322 Mar  9 13:39 runpilot2-wrapper.sh
[2026-03-10 08:04:54] -rw-r--r--. 1 boinc boinc       100 Mar 10 03:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 08:04:54] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 03:44 run_atlas
[2026-03-10 08:04:54] -rw-r--r--. 1 boinc boinc       105 Mar 10 03:44 job.xml
[2026-03-10 08:04:54] -rw-r--r--. 2 boinc boinc 359139866 Mar 10 03:44 EVNT.48998030._000020.pool.root.1
[2026-03-10 08:04:54] -rw-r--r--. 1 boinc boinc      6617 Mar 10 03:44 init_data.xml
[2026-03-10 08:04:54] -rw-r--r--. 2 boinc boinc     15845 Mar 10 03:44 start_atlas.sh
[2026-03-10 08:04:54] drwxrwx--x. 2 boinc boinc      4096 Mar 10 03:44 shared
[2026-03-10 08:04:54] -rw-r--r--. 2 boinc boinc    597937 Mar 10 03:44 input.tar.gz
[2026-03-10 08:04:54] -rw-r--r--. 1 boinc boinc         0 Mar 10 03:44 boinc_lockfile
[2026-03-10 08:04:54] -rw-r--r--. 1 boinc boinc      2559 Mar 10 03:44 pandaJob.out
[2026-03-10 08:04:54] -rw-------. 1 boinc boinc   1002338 Mar 10 03:45 agis_schedconf.cvmfs.json
[2026-03-10 08:04:54] -rw-------. 1 boinc boinc       442 Mar 10 03:45 workernode_map.json
[2026-03-10 08:04:54] drwx------. 5 boinc boinc      4096 Mar 10 03:45 pilot3
[2026-03-10 08:04:54] -rw-------. 1 boinc boinc 289524278 Mar 10 08:03 HITS.48998032._000485.pool.root.1
[2026-03-10 08:04:54] -rw-r--r--. 1 boinc boinc       531 Mar 10 08:03 boinc_task_state.xml
[2026-03-10 08:04:54] -rw-------. 1 boinc boinc        95 Mar 10 08:03 pilot_heartbeat.json
[2026-03-10 08:04:54] -rw-------. 1 boinc boinc      1042 Mar 10 08:03 memory_monitor_summary.json
[2026-03-10 08:04:54] -rw-------. 1 boinc boinc   1511578 Mar 10 08:03 agis_ddmendpoints.agis.ALL.json
[2026-03-10 08:04:54] -rw-------. 1 boinc boinc    413415 Mar 10 08:03 log.48998032._000485.job.log.tgz.1
[2026-03-10 08:04:54] -rw-------. 1 boinc boinc      6351 Mar 10 08:04 heartbeat.json
[2026-03-10 08:04:54] -rw-r--r--. 1 boinc boinc        28 Mar 10 08:04 wrapper_checkpoint.txt
[2026-03-10 08:04:54] -rw-r--r--. 1 boinc boinc      8192 Mar 10 08:04 boinc_mmap_file
[2026-03-10 08:04:54] -rw-------. 1 boinc boinc      4827 Mar 10 08:04 pilotlog.txt
[2026-03-10 08:04:54] -rw-------. 1 boinc boinc   2116095 Mar 10 08:04 log.48998032._000485.job.log.1
[2026-03-10 08:04:54] -rw-------. 1 boinc boinc       357 Mar 10 08:04 output.list
[2026-03-10 08:04:54] -rw-r--r--. 1 boinc boinc       620 Mar 10 08:04 runtime_log
[2026-03-10 08:04:54] -rw-------. 1 boinc boinc   2549760 Mar 10 08:04 result.tar.gz
[2026-03-10 08:04:54] -rw-r--r--. 1 boinc boinc      9205 Mar 10 08:04 runtime_log.err
[2026-03-10 08:04:54] -rw-------. 1 boinc boinc       666 Mar 10 08:04 pBSLDmH4oJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm9UcLDmoymxEn.diag
[2026-03-10 08:04:54] -rw-r--r--. 1 boinc boinc     20994 Mar 10 08:04 stderr.txt
[2026-03-10 08:04:54] HITS file was successfully produced:
[2026-03-10 08:04:54] -rw-------. 1 boinc boinc 289524278 Mar 10 08:03 shared/HITS.pool.root.1
[2026-03-10 08:04:54]  *** Contents of shared directory: ***
[2026-03-10 08:04:54] total 636564
[2026-03-10 08:04:54] -rw-r--r--. 2 boinc boinc 359139866 Mar 10 03:44 ATLAS.root_0
[2026-03-10 08:04:54] -rw-r--r--. 2 boinc boinc     15845 Mar 10 03:44 start_atlas.sh
[2026-03-10 08:04:54] -rw-r--r--. 2 boinc boinc    597937 Mar 10 03:44 input.tar.gz
[2026-03-10 08:04:54] -rw-------. 1 boinc boinc 289524278 Mar 10 08:03 HITS.pool.root.1
[2026-03-10 08:04:54] -rw-------. 1 boinc boinc   2549760 Mar 10 08:04 result.tar.gz
08:04:55 (46021): run_atlas exited; CPU time 59251.589607
08:04:55 (46021): called boinc_finish(0)

</stderr_txt>
]]>

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