Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-10 02:22:36 (42108): vboxwrapper version 26210
2026-03-10 02:22:36 (42108): BOINC client version: 8.2.8
2026-03-10 02:22:37 (42108): Detected: VirtualBox VboxManage Interface (Version: 7.2.6)
2026-03-10 02:22:37 (42108): Successfully copied 'init_data.xml' to the shared directory.
2026-03-10 02:22:37 (42108): Create VM. (boinc_1d0c1ce0456418ce, slot#3)
2026-03-10 02:22:38 (42108): Setting Memory Size for VM. (4400MB)
2026-03-10 02:22:38 (42108): Setting CPU Count for VM. (4)
2026-03-10 02:22:38 (42108): Setting Chipset Options for VM.
2026-03-10 02:22:38 (42108): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-10 02:22:39 (42108): Setting Boot Options for VM.
2026-03-10 02:22:39 (42108): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-10 02:22:39 (42108): Enabling VM Network Access.
2026-03-10 02:22:40 (42108): Disabling USB Support for VM.
2026-03-10 02:22:40 (42108): Disabling COM Port Support for VM.
2026-03-10 02:22:40 (42108): Disabling LPT Port Support for VM.
2026-03-10 02:22:41 (42108): Disabling Audio Support for VM.
2026-03-10 02:22:41 (42108): Disabling Clipboard Support for VM.
2026-03-10 02:22:41 (42108): Disabling Drag and Drop Support for VM.
2026-03-10 02:22:41 (42108): Adding storage controller(s) to VM.
2026-03-10 02:22:42 (42108): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-10 02:22:42 (42108): Adding VirtualBox Guest Additions to VM.
2026-03-10 02:22:42 (42108): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-10 02:22:43 (42108): forwarding host port 63075 to guest port 80
2026-03-10 02:22:43 (42108): Enabling remote desktop for VM.
2026-03-10 02:22:43 (42108): Required extension pack not installed, remote desktop not enabled.
2026-03-10 02:22:43 (42108): Enabling shared directory for VM.
2026-03-10 02:22:44 (42108): Starting VM using VBoxManage interface. (boinc_1d0c1ce0456418ce, slot#3)
2026-03-10 02:22:49 (42108): Successfully started VM. (PID = '41776')
2026-03-10 02:22:49 (42108): Reporting VM Process ID to BOINC.
2026-03-10 02:22:49 (42108): Guest Log: BIOS: VirtualBox 7.2.6
2026-03-10 02:22:49 (42108): Guest Log: CPUID EDX: 0x178bfbff
2026-03-10 02:22:49 (42108): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-10 02:22:49 (42108): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-10 02:22:49 (42108): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-10 02:22:49 (42108): Detected: Web Application Enabled (http://localhost:63075)
2026-03-10 02:22:49 (42108): Preference change detected
2026-03-10 02:22:49 (42108): Setting CPU throttle for VM. (90%)
2026-03-10 02:22:49 (42108): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-10 02:22:51 (42108): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-10 02:22:51 (42108): Guest Log: BIOS: Booting from Hard Disk...
2026-03-10 02:22:53 (42108): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-10 02:22:53 (42108): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-10 02:22:53 (42108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-10 02:22:53 (42108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-10 02:22:53 (42108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-10 02:22:53 (42108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-10 02:22:53 (42108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-10 02:22:53 (42108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-10 02:22:53 (42108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-10 02:22:53 (42108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-10 02:22:53 (42108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-10 02:22:53 (42108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-10 02:22:53 (42108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-10 02:22:53 (42108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-10 02:22:53 (42108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-10 02:22:53 (42108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-10 02:22:53 (42108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-10 02:22:53 (42108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-10 02:22:53 (42108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-10 02:22:53 (42108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-10 02:22:53 (42108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-10 02:22:53 (42108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-10 02:22:53 (42108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-10 02:22:53 (42108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-10 02:22:53 (42108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-10 02:22:53 (42108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-10 02:22:53 (42108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-10 02:22:53 (42108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-10 02:22:53 (42108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-10 02:22:53 (42108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-10 02:22:53 (42108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-10 02:22:53 (42108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-10 02:22:58 (42108): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-10 02:22:58 (42108): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-10 02:23:01 (42108): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-10 02:23:01 (42108): Guest Log: 00:00:00.000065 main     Log opened 2026-03-10T02:22:59.789621000Z
2026-03-10 02:23:01 (42108): Guest Log: 00:00:00.000144 main     OS Product: Linux
2026-03-10 02:23:01 (42108): Guest Log: 00:00:00.000157 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-10 02:23:01 (42108): Guest Log: 00:00:00.000168 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-10 02:23:01 (42108): Guest Log: 00:00:00.000179 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-10 02:23:01 (42108): Guest Log: 00:00:00.000180 main     Process ID: 1306
2026-03-10 02:23:01 (42108): Guest Log: 00:00:00.000180 main     Package type: LINUX_64BITS_GENERIC
2026-03-10 02:23:01 (42108): Guest Log: 00:00:00.000722 main     5.2.32 r132073 started. Verbose level = 0
2026-03-10 02:23:01 (42108): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-10 02:23:01 (42108): Guest Log: [INFO] Mounting shared directory
2026-03-10 02:23:01 (42108): Guest Log: [INFO] Checking for init_data.xml
2026-03-10 02:23:05 (42108): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-10 02:23:05 (42108): Guest Log: [INFO] Detected branch: prod
2026-03-10 02:23:05 (42108): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-10 02:23:05 (42108): Guest Log: Copying input files
2026-03-10 02:23:07 (42108): Guest Log: Copied input files into RunAtlas.
2026-03-10 02:23:07 (42108): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-10 02:23:07 (42108): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-10 02:23:07 (42108): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-10 02:23:07 (42108): Guest Log: Further information can be found at the LHC@home message board.
2026-03-10 02:23:11 (42108): Guest Log: 00:00:10.010025 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 856 740 000ns (GuestNow=1 773 105 790 934 397 000 ns GuestLast=1 773 109 379 791 137 000 ns fSetTimeLastLoop=true )
2026-03-10 02:24:07 (42108): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-10 02:24:08 (42108): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-10 02:24:08 (42108): Guest Log: 2.6.3.0 1597 1 30180 157097 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-10 02:24:08 (42108): Guest Log: copied the webapp to /var/www
2026-03-10 02:24:08 (42108): Guest Log: ATHENA_PROC_NUMBER=4
2026-03-10 02:24:08 (42108): Guest Log: ATHENA_CORE_NUMBER=4
2026-03-10 02:24:08 (42108): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-10 02:24:08 (42108): Guest Log:  *** Starting ATLAS job. (PandaID=7039297091 taskID=48955006) ***
2026-03-10 04:02:51 (42108): Status Report: Elapsed Time: '6000.000000'
2026-03-10 04:02:51 (42108): Status Report: CPU Time: '20439.796875'
2026-03-10 04:34:07 (42108): Guest Log:  *** Job finished ***
2026-03-10 04:34:07 (42108): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-10 04:34:07 (42108): Guest Log: 2026-03-10 03:33:57,132 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-10 04:34:07 (42108): Guest Log: 2026-03-10 03:33:57,132 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-10 04:34:07 (42108): Guest Log: 2026-03-10 03:34:05,227 | INFO     | [monitor] cgroup control has ended
2026-03-10 04:34:07 (42108): Guest Log: 2026-03-10 03:34:05,260 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140269076182848)>', '<ExcThread(monitor, started 140268632258304)>']
2026-03-10 04:34:07 (42108): Guest Log: 2026-03-10 03:34:05,459 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-10 04:34:07 (42108): Guest Log: 2026-03-10 03:34:05,459 | INFO     | [monitor] control thread has ended
2026-03-10 04:34:07 (42108): Guest Log: 2026-03-10 03:34:10,271 | INFO     | all workflow threads have been joined
2026-03-10 04:34:07 (42108): Guest Log: 2026-03-10 03:34:10,271 | INFO     | end of generic workflow (traces error code: 0)
2026-03-10 04:34:07 (42108): Guest Log: 2026-03-10 03:34:10,271 | INFO     | traces error code: 0
2026-03-10 04:34:07 (42108): Guest Log: 2026-03-10 03:34:10,271 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-10 04:34:07 (42108): Guest Log: 2026-03-10 03:34:10,361 [wrapper] ==== pilot stdout END ====
2026-03-10 04:34:07 (42108): Guest Log: 2026-03-10 03:34:10,364 [wrapper] ==== wrapper stdout RESUME ====
2026-03-10 04:34:07 (42108): Guest Log: 2026-03-10 03:34:10,366 [wrapper] pilotpid: 5996
2026-03-10 04:34:07 (42108): Guest Log: 2026-03-10 03:34:10,369 [wrapper] Pilot exit status: 0
2026-03-10 04:34:07 (42108): Guest Log: 2026-03-10 03:34:10,464 [wrapper] pandaids: 7039297091
2026-03-10 04:34:07 (42108): Guest Log: 2026-03-10 03:34:10,484 [wrapper] cleanup supervisor_pilot 26027 5997
2026-03-10 04:34:07 (42108): Guest Log: 2026-03-10 03:34:10,487 [wrapper] Test setup, not cleaning
2026-03-10 04:34:07 (42108): Guest Log: 2026-03-10 03:34:10,490 [wrapper] apfmon messages muted
2026-03-10 04:34:07 (42108): Guest Log: 2026-03-10 03:34:10,493 [wrapper] ==== wrapper stdout END ====
2026-03-10 04:34:07 (42108): Guest Log: 2026-03-10 03:34:10,495 [wrapper] ==== wrapper stderr END ====
2026-03-10 04:34:07 (42108): Guest Log:  *** Error codes and diagnostics ***
2026-03-10 04:34:07 (42108): Guest Log:     "exeErrorCode": 0,
2026-03-10 04:34:07 (42108): Guest Log:     "exeErrorDiag": "",
2026-03-10 04:34:07 (42108): Guest Log:     "pilotErrorCode": 0,
2026-03-10 04:34:07 (42108): Guest Log:     "pilotErrorDiag": "",
2026-03-10 04:34:07 (42108): Guest Log:  *** Listing of results directory ***
2026-03-10 04:34:07 (42108): Guest Log: total 188856
2026-03-10 04:34:07 (42108): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  7 21:34 pilot3.tar.gz
2026-03-10 04:34:07 (42108): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  7 21:55 queuedata.json
2026-03-10 04:34:07 (42108): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  7 21:55 runpilot2-wrapper.sh
2026-03-10 04:34:07 (42108): Guest Log: -rwxr-xr-x. 1 atlas atlas      8617 Mar 10 01:23 init_data.xml
2026-03-10 04:34:07 (42108): Guest Log: -rwxr-xr-x. 1 atlas atlas    597954 Mar 10 01:23 input.tar.gz
2026-03-10 04:34:07 (42108): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar 10 01:23 start_atlas.sh
2026-03-10 04:34:07 (42108): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 10 01:23 EVNT.46701403._000415.pool.root.1 -> /data/./ATLAS.root_0
2026-03-10 04:34:07 (42108): Guest Log: -rw-r--r--. 1 atlas atlas      2563 Mar 10 01:24 pandaJob.out
2026-03-10 04:34:07 (42108): Guest Log: -rw-------. 1 atlas atlas   1002338 Mar 10 01:24 agis_schedconf.cvmfs.json
2026-03-10 04:34:07 (42108): Guest Log: -rw-------. 1 atlas atlas   1511578 Mar 10 01:24 agis_ddmendpoints.agis.ALL.json
2026-03-10 04:34:07 (42108): Guest Log: -rw-------. 1 atlas atlas       422 Mar 10 01:24 workernode_map.json
2026-03-10 04:34:07 (42108): Guest Log: drwx------. 5 atlas atlas      4096 Mar 10 01:24 pilot3
2026-03-10 04:34:07 (42108): Guest Log: -rw-------. 1 atlas atlas 186691936 Mar 10 03:33 HITS.48955006._020728.pool.root.1
2026-03-10 04:34:07 (42108): Guest Log: -rw-------. 1 atlas atlas        95 Mar 10 03:33 pilot_heartbeat.json
2026-03-10 04:34:07 (42108): Guest Log: -rw-------. 1 atlas atlas      1026 Mar 10 03:33 memory_monitor_summary.json
2026-03-10 04:34:07 (42108): Guest Log: -rw-------. 1 atlas atlas    320768 Mar 10 03:33 log.48955006._020728.job.log.tgz.1
2026-03-10 04:34:07 (42108): Guest Log: -rw-------. 1 atlas atlas      6333 Mar 10 03:33 heartbeat.json
2026-03-10 04:34:07 (42108): Guest Log: -rw-------. 1 atlas atlas      4873 Mar 10 03:34 pilotlog.txt
2026-03-10 04:34:07 (42108): Guest Log: -rw-------. 1 atlas atlas   1094124 Mar 10 03:34 log.48955006._020728.job.log.1
2026-03-10 04:34:07 (42108): Guest Log: -rw-------. 1 atlas atlas       357 Mar 10 03:34 output.list
2026-03-10 04:34:07 (42108): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 10 03:34 runtime_log
2026-03-10 04:34:07 (42108): Guest Log: -rw-------. 1 atlas atlas   1433600 Mar 10 03:34 result.tar.gz
2026-03-10 04:34:07 (42108): Guest Log: -rw-r--r--. 1 atlas atlas      8736 Mar 10 03:34 runtime_log.err
2026-03-10 04:34:07 (42108): Guest Log: -rw-------. 1 atlas atlas       649 Mar 10 03:34 NzbNDm2nEJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm4HXLDmbznVKo.diag
2026-03-10 04:34:07 (42108): Guest Log: Looking for outputfile HITS.48955006._020728.pool.root.1
2026-03-10 04:34:07 (42108): Guest Log: HITS file was successfully produced
2026-03-10 04:34:07 (42108): Guest Log: -rw-------. 1 atlas atlas 186691936 Mar 10 03:33 /home/atlas/RunAtlas/HITS.48955006._020728.pool.root.1
2026-03-10 04:34:08 (42108): Guest Log: Successfully finished the ATLAS job!
2026-03-10 04:34:08 (42108): Guest Log: Copying the results back to the shared directory!
2026-03-10 04:34:08 (42108): Guest Log:  *** Contents of shared directory: ***
2026-03-10 04:34:08 (42108): Guest Log: total 616080
2026-03-10 04:34:08 (42108): Guest Log: -rwxrwxrwx. 1 root root 442105938 Mar 10 01:22 ATLAS.root_0
2026-03-10 04:34:08 (42108): Guest Log: -rwxrwxrwx. 1 root root 186691936 Mar 10 03:34 HITS.pool.root.1
2026-03-10 04:34:08 (42108): Guest Log: -rwxrwxrwx. 1 root root      8617 Mar 10 01:22 init_data.xml
2026-03-10 04:34:08 (42108): Guest Log: -rwxrwxrwx. 1 root root    597954 Mar  9 16:13 input.tar.gz
2026-03-10 04:34:08 (42108): Guest Log: -rwxrwxrwx. 1 root root   1433600 Mar 10 03:34 result.tar.gz
2026-03-10 04:34:08 (42108): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  9 16:13 start_atlas.sh
2026-03-10 04:34:08 (42108): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-10 04:34:08 (42108): VM Completion File Detected.
2026-03-10 04:34:08 (42108): Powering off VM.
2026-03-10 04:34:09 (42108): Successfully stopped VM.
2026-03-10 04:34:09 (42108): Deregistering VM. (boinc_1d0c1ce0456418ce, slot#3)
2026-03-10 04:34:09 (42108): Removing network bandwidth throttle group from VM.
2026-03-10 04:34:09 (42108): Removing VM from VirtualBox.
2026-03-10 04:34:14 (42108): called boinc_finish(0)

</stderr_txt>
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