Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:49:59 (915228): wrapper (7.7.26015): starting
18:49:59 (915228): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 18:49:59] Arguments: --nthreads 4
[2026-03-09 18:49:59] Threads: 4
[2026-03-09 18:49:59] Checking for CVMFS
[2026-03-09 18:49:59] No cvmfs_config command found, will try listing directly
[2026-03-09 18:49:59] CVMFS is ok
[2026-03-09 18:49:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 18:49:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 18:49:59] Further information can be found at the LHC@home message board.
[2026-03-09 18:49:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 18:49:59] Checking for apptainer binary...
[2026-03-09 18:49:59] which: no apptainer in ((null))
[2026-03-09 18:49:59] apptainer is not installed, using version from CVMFS
[2026-03-09 18:49:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 18:49:59] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot36/slots/9/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut20.grid.cesnet.cz
[2026-03-09 18:49:59] apptainer works
[2026-03-09 18:49:59] Set ATHENA_PROC_NUMBER=4
[2026-03-09 18:49:59] Set ATHENA_CORE_NUMBER=4
[2026-03-09 18:49:59] Starting ATLAS job with PandaID=7047232210
[2026-03-09 18:49:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot36/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 20:22:27]  *** The last 200 lines of the pilot log: ***
[2026-03-09 20:22:27]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-09 20:22:27]  is_altstaged=None
[2026-03-09 20:22:27]  is_tar=False
[2026-03-09 20:22:27]  lfn=log.48958635._002212.job.log.tgz.1
[2026-03-09 20:22:27]  mtime=0
[2026-03-09 20:22:27]  protocol_id=None
[2026-03-09 20:22:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-09 20:22:27]  replicas=None
[2026-03-09 20:22:27]  scope=mc23_13p6TeV
[2026-03-09 20:22:27]  status=None
[2026-03-09 20:22:27]  status_code=0
[2026-03-09 20:22:27]  storage_token=
[2026-03-09 20:22:27]  surl=/var/lib/boinc/var/slot36/slots/9/PanDA_Pilot-7047232210/log.48958635._002212.job.log.tgz.1
[2026-03-09 20:22:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/de/8a/log.48958635._002212.job.log.tgz.1
[2026-03-09 20:22:27]  workdir=None
[2026-03-09 20:22:27] ]
[2026-03-09 20:22:27] 2026-03-09 19:21:38,407 | INFO     | transferring file log.48958635._002212.job.log.tgz.1 from /var/lib/boinc/var/slot36/slots/9/PanDA_Pilot-7047232210/log.48958635._002212.job.log.tgz.1 to /var/lib/b
[2026-03-09 20:22:27] 2026-03-09 19:21:38,408 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot36/slots/9/PanDA_Pilot-7047232210/log.48958635._002212.job.log.tgz.1 /var/lib/boinc/var/slot36/slots/9/lo
[2026-03-09 20:22:27] 2026-03-09 19:21:38,425 | INFO     | adding to output.list: log.48958635._002212.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/de/8a/log.48958635._002212.job.log.tg
[2026-03-09 20:22:27] 2026-03-09 19:21:38,425 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-09 20:22:27] 2026-03-09 19:21:38,426 | INFO     | summary of transferred files:
[2026-03-09 20:22:27] 2026-03-09 19:21:38,426 | INFO     |  -- lfn=log.48958635._002212.job.log.tgz.1, status_code=0, status=transferred
[2026-03-09 20:22:27] 2026-03-09 19:21:38,426 | INFO     | stage-out finished correctly
[2026-03-09 20:22:27] 2026-03-09 19:21:39,901 | INFO     | time since job start (5487s) is within the limit (349056.0s)
[2026-03-09 20:22:27] 2026-03-09 19:21:40,347 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-09 20:22:27] 2026-03-09 19:21:40,396 | INFO     | job 7047232210 has state=finished
[2026-03-09 20:22:27] 2026-03-09 19:21:40,396 | INFO     | preparing for final server update for job 7047232210 in state='finished'
[2026-03-09 20:22:27] 2026-03-09 19:21:40,396 | INFO     | reading metadata from: /var/lib/boinc/var/slot36/slots/9/PanDA_Pilot-7047232210/jobReport.json
[2026-03-09 20:22:27] 2026-03-09 19:21:40,398 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot36/slots/9/workernode_map.json
[2026-03-09 20:22:27] 2026-03-09 19:21:40,398 | INFO     | this job has now completed (state=finished)
[2026-03-09 20:22:27] 2026-03-09 19:21:40,398 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 20:22:27] 2026-03-09 19:21:40,398 | INFO     | log transfer has been attempted: DONE
[2026-03-09 20:22:27] 2026-03-09 19:21:40,398 | INFO     | job 7047232210 has finished - writing final server update
[2026-03-09 20:22:27] 2026-03-09 19:21:40,399 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_968952/.job.ad'
[2026-03-09 20:22:27] 2026-03-09 19:21:40,399 | INFO     | total number of processed events: 400 (read)
[2026-03-09 20:22:27] 2026-03-09 19:21:40,417 | INFO     | using path: /var/lib/boinc/var/slot36/slots/9/PanDA_Pilot-7047232210/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 20:22:27] 2026-03-09 19:21:40,417 | INFO     | extracted standard info from prmon json
[2026-03-09 20:22:27] 2026-03-09 19:21:40,417 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 20:22:27] 2026-03-09 19:21:40,417 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 20:22:27] 2026-03-09 19:21:40,418 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 20:22:27] 2026-03-09 19:21:40,418 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 20:22:27] 2026-03-09 19:21:40,419 | INFO     | fitting pss+swap vs Time
[2026-03-09 20:22:27] 2026-03-09 19:21:40,419 | INFO     | sum of square deviations: 177275882.0
[2026-03-09 20:22:27] 2026-03-09 19:21:40,419 | INFO     | sum of deviations: 629694520.9999999
[2026-03-09 20:22:27] 2026-03-09 19:21:40,419 | INFO     | mean x: 1773081438.0
[2026-03-09 20:22:27] 2026-03-09 19:21:40,419 | INFO     | mean y: 2348434.493975904
[2026-03-09 20:22:27] 2026-03-09 19:21:40,419 | INFO     | intersect: -6295742733.910991
[2026-03-09 20:22:27] 2026-03-09 19:21:40,419 | INFO     | chi2: 0.0005913439832145436
[2026-03-09 20:22:27] 2026-03-09 19:21:40,419 | INFO     | current memory leak: 3.55 B/s (using 83 data points, chi2=0.00)
[2026-03-09 20:22:27] 2026-03-09 19:21:40,420 | INFO     | could have reported an average CPU frequency of 3555 MHz (7 samples)
[2026-03-09 20:22:27] 2026-03-09 19:21:40,420 | INFO     | ..............................
[2026-03-09 20:22:27] 2026-03-09 19:21:40,420 | INFO     | . Timing measurements:
[2026-03-09 20:22:27] 2026-03-09 19:21:40,420 | INFO     | . get job = 0 s
[2026-03-09 20:22:27] 2026-03-09 19:21:40,420 | INFO     | . initial setup = 5 s
[2026-03-09 20:22:27] 2026-03-09 19:21:40,420 | INFO     | . payload setup = 5 s
[2026-03-09 20:22:27] 2026-03-09 19:21:40,420 | INFO     | . stage-in = 0 s
[2026-03-09 20:22:27] 2026-03-09 19:21:40,420 | INFO     | . payload execution = 5464 s
[2026-03-09 20:22:27] 2026-03-09 19:21:40,420 | INFO     | . stage-out = 0 s
[2026-03-09 20:22:27] 2026-03-09 19:21:40,420 | INFO     | . log creation = 0 s
[2026-03-09 20:22:27] 2026-03-09 19:21:40,420 | INFO     | ..............................
[2026-03-09 20:22:27] 2026-03-09 19:21:40,468 | INFO     | 
[2026-03-09 20:22:27] 2026-03-09 19:21:40,468 | INFO     | job summary report
[2026-03-09 20:22:27] 2026-03-09 19:21:40,468 | INFO     | --------------------------------------------------
[2026-03-09 20:22:27] 2026-03-09 19:21:40,468 | INFO     | PanDA job id: 7047232210
[2026-03-09 20:22:27] 2026-03-09 19:21:40,468 | INFO     | task id: 48958635
[2026-03-09 20:22:27] 2026-03-09 19:21:40,468 | INFO     | errors: (none)
[2026-03-09 20:22:27] 2026-03-09 19:21:40,468 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 20:22:27] 2026-03-09 19:21:40,468 | INFO     | pilot state: finished 
[2026-03-09 20:22:27] 2026-03-09 19:21:40,468 | INFO     | transexitcode: 0
[2026-03-09 20:22:27] 2026-03-09 19:21:40,468 | INFO     | exeerrorcode: 0
[2026-03-09 20:22:27] 2026-03-09 19:21:40,469 | INFO     | exeerrordiag: 
[2026-03-09 20:22:27] 2026-03-09 19:21:40,469 | INFO     | exitcode: 0
[2026-03-09 20:22:27] 2026-03-09 19:21:40,469 | INFO     | exitmsg: OK
[2026-03-09 20:22:27] 2026-03-09 19:21:40,469 | INFO     | cpuconsumptiontime: 20671 s
[2026-03-09 20:22:27] 2026-03-09 19:21:40,469 | INFO     | nevents: 400
[2026-03-09 20:22:27] 2026-03-09 19:21:40,469 | INFO     | neventsw: 0
[2026-03-09 20:22:27] 2026-03-09 19:21:40,469 | INFO     | pid: 940500
[2026-03-09 20:22:27] 2026-03-09 19:21:40,469 | INFO     | pgrp: 940500
[2026-03-09 20:22:27] 2026-03-09 19:21:40,469 | INFO     | corecount: 4
[2026-03-09 20:22:27] 2026-03-09 19:21:40,469 | INFO     | event service: False
[2026-03-09 20:22:27] 2026-03-09 19:21:40,469 | INFO     | sizes: {0: 2280197, 11: 2280197, 5473: 2306862, 5475: 2315882, 5477: 2316132}
[2026-03-09 20:22:27] 2026-03-09 19:21:40,469 | INFO     | --------------------------------------------------
[2026-03-09 20:22:27] 2026-03-09 19:21:40,469 | INFO     | 
[2026-03-09 20:22:27] 2026-03-09 19:21:40,469 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot36/slots/9
[2026-03-09 20:22:27] 2026-03-09 19:21:40,488 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 20:22:27] 2026-03-09 19:21:40,488 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 20:22:27] 2026-03-09 19:21:40,488 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 20:22:27] 2026-03-09 19:21:40,488 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 20:22:27] 2026-03-09 19:21:40,488 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 20:22:27] 2026-03-09 19:21:40,488 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 20:22:27] 2026-03-09 19:21:40,488 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 20:22:27] 2026-03-09 19:21:40,488 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 20:22:27] 2026-03-09 19:21:40,488 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 20:22:27] 2026-03-09 19:21:40,488 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 20:22:27] 2026-03-09 19:21:40,488 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 20:22:27] 2026-03-09 19:21:40,489 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 20:22:27] 2026-03-09 19:21:40,489 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 20:22:27] 2026-03-09 19:21:40,489 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 20:22:27] 2026-03-09 19:21:40,489 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 20:22:27] 2026-03-09 19:21:40,489 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 20:22:27] 2026-03-09 19:21:40,489 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 20:22:27] 2026-03-09 19:21:40,489 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 20:22:27] 2026-03-09 19:21:40,489 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 20:22:27] 2026-03-09 19:21:40,489 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 20:22:27] 2026-03-09 19:21:40,489 | INFO     | job 7047232210 has completed (purged errors)
[2026-03-09 20:22:27] 2026-03-09 19:21:40,489 | INFO     | overall cleanup function is called
[2026-03-09 20:22:27] 2026-03-09 19:21:41,495 | INFO     | --- collectZombieJob: --- 10, [940500]
[2026-03-09 20:22:27] 2026-03-09 19:21:41,495 | INFO     | zombie collector waiting for pid 940500
[2026-03-09 20:22:27] 2026-03-09 19:21:41,495 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 20:22:27] 2026-03-09 19:21:41,495 | INFO     | collected zombie processes
[2026-03-09 20:22:27] 2026-03-09 19:21:41,495 | INFO     | will attempt to kill all subprocesses of pid=940500
[2026-03-09 20:22:27] 2026-03-09 19:21:41,942 | INFO     | process IDs to be killed: [940500] (in reverse order)
[2026-03-09 20:22:27] 2026-03-09 19:21:42,190 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 20:22:27] 2026-03-09 19:21:42,190 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 20:22:27] 2026-03-09 19:21:42,222 | INFO     | did not find any defunct processes belonging to 940500
[2026-03-09 20:22:27] 2026-03-09 19:21:42,251 | INFO     | did not find any defunct processes belonging to 940500
[2026-03-09 20:22:27] 2026-03-09 19:21:42,251 | INFO     | ready for new job
[2026-03-09 20:22:27] 2026-03-09 19:21:42,251 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 20:22:27] 2026-03-09 19:21:42,252 | INFO     | **************************************
[2026-03-09 20:22:27] 2026-03-09 19:21:42,252 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 20:22:27] 2026-03-09 19:21:42,253 | INFO     | **************************************
[2026-03-09 20:22:27] 2026-03-09 19:21:42,253 | INFO     | 
[2026-03-09 20:22:27] 2026-03-09 19:21:42,259 | INFO     | architecture information:
[2026-03-09 20:22:27] 2026-03-09 19:21:42,259 | INFO     | executing command: cat /etc/os-release
[2026-03-09 20:22:27] 2026-03-09 19:21:42,276 | INFO     | cat /etc/os-release:
[2026-03-09 20:22:27] NAME="CentOS Linux"
[2026-03-09 20:22:27] VERSION="7 (Core)"
[2026-03-09 20:22:27] ID="centos"
[2026-03-09 20:22:27] ID_LIKE="rhel fedora"
[2026-03-09 20:22:27] VERSION_ID="7"
[2026-03-09 20:22:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 20:22:27] ANSI_COLOR="0;31"
[2026-03-09 20:22:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 20:22:27] HOME_URL="https://www.centos.org/"
[2026-03-09 20:22:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 20:22:27] 
[2026-03-09 20:22:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 20:22:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 20:22:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 20:22:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 20:22:27] 
[2026-03-09 20:22:27] 2026-03-09 19:21:42,277 | INFO     | **************************************
[2026-03-09 20:22:27] 2026-03-09 19:21:42,779 | INFO     | executing command: df -mP /var/lib/boinc/var/slot36/slots/9
[2026-03-09 20:22:27] 2026-03-09 19:21:42,795 | INFO     | sufficient remaining disk space (23783800832 B)
[2026-03-09 20:22:27] 2026-03-09 19:21:42,795 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 20:22:27] 2026-03-09 19:21:42,795 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 20:22:27] 2026-03-09 19:21:42,795 | INFO     | update_server=False
[2026-03-09 20:22:27] 2026-03-09 19:21:42,795 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 20:22:27] 2026-03-09 19:21:42,796 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 20:22:27] 2026-03-09 19:21:42,836 | WARNING  | process 940500 can no longer be monitored (due to stat problems) - aborting
[2026-03-09 20:22:27] 2026-03-09 19:21:42,877 | INFO     | all job control threads have been joined
[2026-03-09 20:22:27] 2026-03-09 19:21:42,917 | INFO     | all payload control threads have been joined
[2026-03-09 20:22:27] 2026-03-09 19:21:43,140 | INFO     | using path: /var/lib/boinc/var/slot36/slots/9/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 20:22:27] 2026-03-09 19:21:43,538 | INFO     | number of running child processes to parent process 940500: 1
[2026-03-09 20:22:27] 2026-03-09 19:21:43,538 | INFO     | maximum number of monitored processes: 6
[2026-03-09 20:22:27] 2026-03-09 19:21:43,538 | INFO     | aborting job monitoring since job object (job id=7047232210) has expired
[2026-03-09 20:22:27] 2026-03-09 19:21:43,538 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 20:22:27] 2026-03-09 19:21:43,538 | INFO     | will abort loop
[2026-03-09 20:22:27] 2026-03-09 19:21:43,682 | INFO     | all data control threads have been joined
[2026-03-09 20:22:27] 2026-03-09 19:21:43,796 | INFO     | [job] retrieve thread has finished
[2026-03-09 20:22:27] 2026-03-09 19:21:43,882 | INFO     | [job] control thread has finished
[2026-03-09 20:22:27] 2026-03-09 19:21:43,926 | INFO     | [payload] control thread has finished
[2026-03-09 20:22:27] 2026-03-09 19:21:43,983 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 20:22:27] 2026-03-09 19:21:44,155 | INFO     | [payload] validate_post thread has finished
[2026-03-09 20:22:27] 2026-03-09 19:21:44,159 | INFO     | [payload] failed_post thread has finished
[2026-03-09 20:22:27] 2026-03-09 19:21:44,339 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 20:22:27] 2026-03-09 19:21:44,363 | INFO     | [job] validate thread has finished
[2026-03-09 20:22:27] 2026-03-09 19:21:44,376 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 20:22:27] 2026-03-09 19:21:44,425 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 20:22:27] 2026-03-09 19:21:44,543 | INFO     | [job] job monitor thread has finished
[2026-03-09 20:22:27] 2026-03-09 19:21:44,687 | INFO     | [data] control thread has finished
[2026-03-09 20:22:27] 2026-03-09 19:21:44,842 | INFO     | [data] copytool_in thread has finished
[2026-03-09 20:22:27] 2026-03-09 19:21:45,172 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 20:22:27] 2026-03-09 19:21:45,478 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 20:22:27] 2026-03-09 19:21:45,988 | INFO     | [data] copytool_out thread has finished
[2026-03-09 20:22:27] 2026-03-09 19:21:46,483 | INFO     | [job] queue monitor thread has finished
[2026-03-09 20:22:27] 2026-03-09 19:21:46,802 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 20:22:27] 2026-03-09 19:22:13,464 | INFO     | PID=920998 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-09 20:22:27] 2026-03-09 19:22:13,464 | INFO     | .. there are 61 such processes running
[2026-03-09 20:22:27] 2026-03-09 19:22:13,464 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 20:22:27] 2026-03-09 19:22:13,464 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 20:22:27] 2026-03-09 19:22:13,464 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 20:22:27] 2026-03-09 19:22:20,970 | INFO     | [monitor] cgroup control has ended
[2026-03-09 20:22:27] 2026-03-09 19:22:22,033 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22591851059008)>', '<ExcThread(monitor, started 22591606884096)>']
[2026-03-09 20:22:27] 2026-03-09 19:22:22,509 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 20:22:27] 2026-03-09 19:22:22,509 | INFO     | [monitor] control thread has ended
[2026-03-09 20:22:27] 2026-03-09 19:22:27,059 | INFO     | all workflow threads have been joined
[2026-03-09 20:22:27] 2026-03-09 19:22:27,059 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 20:22:27] 2026-03-09 19:22:27,059 | INFO     | traces error code: 0
[2026-03-09 20:22:27] 2026-03-09 19:22:27,059 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 20:22:27] 2026-03-09 19:22:27,190 [wrapper] ==== pilot stdout END ====
[2026-03-09 20:22:27] 2026-03-09 19:22:27,192 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 20:22:27] 2026-03-09 19:22:27,194 [wrapper] pilotpid: 920998
[2026-03-09 20:22:27] 2026-03-09 19:22:27,196 [wrapper] Pilot exit status: 0
[2026-03-09 20:22:27] 2026-03-09 19:22:27,204 [wrapper] pandaids: 7047232210
[2026-03-09 20:22:27] 2026-03-09 19:22:27,316 [wrapper] cleanup supervisor_pilot 1831909 920999
[2026-03-09 20:22:27] 2026-03-09 19:22:27,318 [wrapper] Test setup, not cleaning
[2026-03-09 20:22:27] 2026-03-09 19:22:27,321 [wrapper] apfmon messages muted
[2026-03-09 20:22:27] 2026-03-09 19:22:27,323 [wrapper] ==== wrapper stdout END ====
[2026-03-09 20:22:27] 2026-03-09 19:22:27,326 [wrapper] ==== wrapper stderr END ====
[2026-03-09 20:22:27]  *** Error codes and diagnostics ***
[2026-03-09 20:22:27]     "exeErrorCode": 0,
[2026-03-09 20:22:27]     "exeErrorDiag": "",
[2026-03-09 20:22:27]     "pilotErrorCode": 0,
[2026-03-09 20:22:27]     "pilotErrorDiag": "",
[2026-03-09 20:22:27]  *** Listing of results directory ***
[2026-03-09 20:22:27] total 443724
[2026-03-09 20:22:27] -rw-r--r--. 1 boinc boinc    584627 Mar  9 12:47 pilot3.tar.gz
[2026-03-09 20:22:27] -rw-r--r--. 1 boinc boinc      5111 Mar  9 12:47 queuedata.json
[2026-03-09 20:22:27] -rwx------. 1 boinc boinc     36322 Mar  9 12:47 runpilot2-wrapper.sh
[2026-03-09 20:22:27] -rw-r--r--. 1 boinc boinc       100 Mar  9 18:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 20:22:27] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 18:49 run_atlas
[2026-03-09 20:22:27] -rw-r--r--. 1 boinc boinc       105 Mar  9 18:49 job.xml
[2026-03-09 20:22:27] -rw-r--r--. 2 boinc boinc 265328695 Mar  9 18:49 EVNT.48958633._000086.pool.root.1
[2026-03-09 20:22:27] -rw-r--r--. 2 boinc boinc     15845 Mar  9 18:49 start_atlas.sh
[2026-03-09 20:22:27] drwxrwx--x. 2 boinc boinc      4096 Mar  9 18:49 shared
[2026-03-09 20:22:27] -rw-r--r--. 2 boinc boinc    597932 Mar  9 18:49 input.tar.gz
[2026-03-09 20:22:27] -rw-r--r--. 1 boinc boinc      6702 Mar  9 18:49 init_data.xml
[2026-03-09 20:22:27] -rw-r--r--. 1 boinc boinc         0 Mar  9 18:49 boinc_lockfile
[2026-03-09 20:22:27] -rw-r--r--. 1 boinc boinc      2526 Mar  9 18:49 pandaJob.out
[2026-03-09 20:22:27] -rw-------. 1 boinc boinc   1002716 Mar  9 18:50 agis_schedconf.cvmfs.json
[2026-03-09 20:22:27] -rw-------. 1 boinc boinc   1511578 Mar  9 18:50 agis_ddmendpoints.agis.ALL.json
[2026-03-09 20:22:27] -rw-------. 1 boinc boinc       444 Mar  9 18:50 workernode_map.json
[2026-03-09 20:22:27] drwx------. 5 boinc boinc      4096 Mar  9 18:50 pilot3
[2026-03-09 20:22:27] -rw-------. 1 boinc boinc 182962815 Mar  9 20:21 HITS.48958635._002212.pool.root.1
[2026-03-09 20:22:27] -rw-r--r--. 1 boinc boinc       529 Mar  9 20:21 boinc_task_state.xml
[2026-03-09 20:22:27] -rw-------. 1 boinc boinc      1029 Mar  9 20:21 memory_monitor_summary.json
[2026-03-09 20:22:27] -rw-------. 1 boinc boinc        95 Mar  9 20:21 pilot_heartbeat.json
[2026-03-09 20:22:27] -rw-------. 1 boinc boinc    276930 Mar  9 20:21 log.48958635._002212.job.log.tgz.1
[2026-03-09 20:22:27] -rw-------. 1 boinc boinc      6347 Mar  9 20:21 heartbeat.json
[2026-03-09 20:22:27] -rw-r--r--. 1 boinc boinc      8192 Mar  9 20:21 boinc_mmap_file
[2026-03-09 20:22:27] -rw-r--r--. 1 boinc boinc        27 Mar  9 20:21 wrapper_checkpoint.txt
[2026-03-09 20:22:27] -rw-------. 1 boinc boinc      5358 Mar  9 20:22 pilotlog.txt
[2026-03-09 20:22:27] -rw-------. 1 boinc boinc    796400 Mar  9 20:22 log.48958635._002212.job.log.1
[2026-03-09 20:22:27] -rw-------. 1 boinc boinc       357 Mar  9 20:22 output.list
[2026-03-09 20:22:27] -rw-r--r--. 1 boinc boinc       620 Mar  9 20:22 runtime_log
[2026-03-09 20:22:27] -rw-------. 1 boinc boinc   1095680 Mar  9 20:22 result.tar.gz
[2026-03-09 20:22:27] -rw-------. 1 boinc boinc       662 Mar  9 20:22 tsoLDmSGoJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmZIcLDmupYTmm.diag
[2026-03-09 20:22:27] -rw-r--r--. 1 boinc boinc      9204 Mar  9 20:22 runtime_log.err
[2026-03-09 20:22:27] -rw-r--r--. 1 boinc boinc     19578 Mar  9 20:22 stderr.txt
[2026-03-09 20:22:27] HITS file was successfully produced:
[2026-03-09 20:22:27] -rw-------. 1 boinc boinc 182962815 Mar  9 20:21 shared/HITS.pool.root.1
[2026-03-09 20:22:27]  *** Contents of shared directory: ***
[2026-03-09 20:22:27] total 439468
[2026-03-09 20:22:27] -rw-r--r--. 2 boinc boinc 265328695 Mar  9 18:49 ATLAS.root_0
[2026-03-09 20:22:27] -rw-r--r--. 2 boinc boinc     15845 Mar  9 18:49 start_atlas.sh
[2026-03-09 20:22:27] -rw-r--r--. 2 boinc boinc    597932 Mar  9 18:49 input.tar.gz
[2026-03-09 20:22:27] -rw-------. 1 boinc boinc 182962815 Mar  9 20:21 HITS.pool.root.1
[2026-03-09 20:22:27] -rw-------. 1 boinc boinc   1095680 Mar  9 20:22 result.tar.gz
20:22:28 (915228): run_atlas exited; CPU time 20901.540664
20:22:28 (915228): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN