Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:00:16 (2985354): wrapper (7.7.26015): starting
17:00:16 (2985354): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 17:00:16] Arguments: --nthreads 4
[2026-03-09 17:00:16] Threads: 4
[2026-03-09 17:00:16] Checking for CVMFS
[2026-03-09 17:00:16] No cvmfs_config command found, will try listing directly
[2026-03-09 17:00:16] CVMFS is ok
[2026-03-09 17:00:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 17:00:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 17:00:16] Further information can be found at the LHC@home message board.
[2026-03-09 17:00:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 17:00:16] Checking for apptainer binary...
[2026-03-09 17:00:16] which: no apptainer in ((null))
[2026-03-09 17:00:16] apptainer is not installed, using version from CVMFS
[2026-03-09 17:00:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 17:00:16] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot36/slots/4/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-09 17:00:16] apptainer works
[2026-03-09 17:00:16] Set ATHENA_PROC_NUMBER=4
[2026-03-09 17:00:16] Set ATHENA_CORE_NUMBER=4
[2026-03-09 17:00:16] Starting ATLAS job with PandaID=7035113584
[2026-03-09 17:00:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot36/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 18:38:43]  *** The last 200 lines of the pilot log: ***
[2026-03-09 18:38:43]  direct_access_wan=False
[2026-03-09 18:38:43]  domain=
[2026-03-09 18:38:43]  filesize=272595
[2026-03-09 18:38:43]  filetype=log
[2026-03-09 18:38:43]  guid=310a36ec-3670-4014-8c39-83d521b7b26b
[2026-03-09 18:38:43]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-09 18:38:43]  is_altstaged=None
[2026-03-09 18:38:43]  is_tar=False
[2026-03-09 18:38:43]  lfn=log.48838462._003540.job.log.tgz.1
[2026-03-09 18:38:43]  mtime=0
[2026-03-09 18:38:43]  protocol_id=None
[2026-03-09 18:38:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-09 18:38:43]  replicas=None
[2026-03-09 18:38:43]  scope=mc23_13p6TeV
[2026-03-09 18:38:43]  status=None
[2026-03-09 18:38:43]  status_code=0
[2026-03-09 18:38:43]  storage_token=
[2026-03-09 18:38:43]  surl=/var/lib/boinc/var/slot36/slots/4/PanDA_Pilot-7035113584/log.48838462._003540.job.log.tgz.1
[2026-03-09 18:38:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/79/2a/log.48838462._003540.job.log.tgz.1
[2026-03-09 18:38:43]  workdir=None
[2026-03-09 18:38:43] ]
[2026-03-09 18:38:43] 2026-03-09 17:37:48,967 | INFO     | transferring file log.48838462._003540.job.log.tgz.1 from /var/lib/boinc/var/slot36/slots/4/PanDA_Pilot-7035113584/log.48838462._003540.job.log.tgz.1 to /var/lib/b
[2026-03-09 18:38:43] 2026-03-09 17:37:48,967 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot36/slots/4/PanDA_Pilot-7035113584/log.48838462._003540.job.log.tgz.1 /var/lib/boinc/var/slot36/slots/4/lo
[2026-03-09 18:38:43] 2026-03-09 17:37:48,982 | INFO     | adding to output.list: log.48838462._003540.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/79/2a/log.48838462._003540.job.log.tg
[2026-03-09 18:38:43] 2026-03-09 17:37:48,982 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-09 18:38:43] 2026-03-09 17:37:48,982 | INFO     | summary of transferred files:
[2026-03-09 18:38:43] 2026-03-09 17:37:48,982 | INFO     |  -- lfn=log.48838462._003540.job.log.tgz.1, status_code=0, status=transferred
[2026-03-09 18:38:43] 2026-03-09 17:37:48,983 | INFO     | stage-out finished correctly
[2026-03-09 18:38:43] 2026-03-09 17:37:49,128 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-09 18:38:43] 2026-03-09 17:37:49,173 | INFO     | job 7035113584 has state=finished
[2026-03-09 18:38:43] 2026-03-09 17:37:49,173 | INFO     | preparing for final server update for job 7035113584 in state='finished'
[2026-03-09 18:38:43] 2026-03-09 17:37:49,173 | INFO     | reading metadata from: /var/lib/boinc/var/slot36/slots/4/PanDA_Pilot-7035113584/jobReport.json
[2026-03-09 18:38:43] 2026-03-09 17:37:49,175 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot36/slots/4/workernode_map.json
[2026-03-09 18:38:43] 2026-03-09 17:37:49,175 | INFO     | this job has now completed (state=finished)
[2026-03-09 18:38:43] 2026-03-09 17:37:49,175 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 18:38:43] 2026-03-09 17:37:49,175 | INFO     | log transfer has been attempted: DONE
[2026-03-09 18:38:43] 2026-03-09 17:37:49,175 | INFO     | job 7035113584 has finished - writing final server update
[2026-03-09 18:38:43] 2026-03-09 17:37:49,175 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2152745/.job.ad'
[2026-03-09 18:38:43] 2026-03-09 17:37:49,175 | INFO     | total number of processed events: 400 (read)
[2026-03-09 18:38:43] 2026-03-09 17:37:49,193 | INFO     | using path: /var/lib/boinc/var/slot36/slots/4/PanDA_Pilot-7035113584/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 18:38:43] 2026-03-09 17:37:49,193 | INFO     | extracted standard info from prmon json
[2026-03-09 18:38:43] 2026-03-09 17:37:49,193 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 18:38:43] 2026-03-09 17:37:49,194 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 18:38:43] 2026-03-09 17:37:49,194 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 18:38:43] 2026-03-09 17:37:49,194 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 18:38:43] 2026-03-09 17:37:49,195 | INFO     | fitting pss+swap vs Time
[2026-03-09 18:38:43] 2026-03-09 17:37:49,195 | INFO     | sum of square deviations: 218571540.0
[2026-03-09 18:38:43] 2026-03-09 17:37:49,195 | INFO     | sum of deviations: 574450786.0000001
[2026-03-09 18:38:43] 2026-03-09 17:37:49,195 | INFO     | mean x: 1773075036.0
[2026-03-09 18:38:43] 2026-03-09 17:37:49,195 | INFO     | mean y: 2346122.202247191
[2026-03-09 18:38:43] 2026-03-09 17:37:49,196 | INFO     | intersect: -4657658323.331597
[2026-03-09 18:38:43] 2026-03-09 17:37:49,196 | INFO     | chi2: 0.0003935592430540275
[2026-03-09 18:38:43] 2026-03-09 17:37:49,196 | INFO     | current memory leak: 2.63 B/s (using 89 data points, chi2=0.00)
[2026-03-09 18:38:43] 2026-03-09 17:37:49,196 | INFO     | could have reported an average CPU frequency of 3621 MHz (7 samples)
[2026-03-09 18:38:43] 2026-03-09 17:37:49,196 | INFO     | ..............................
[2026-03-09 18:38:43] 2026-03-09 17:37:49,196 | INFO     | . Timing measurements:
[2026-03-09 18:38:43] 2026-03-09 17:37:49,196 | INFO     | . get job = 0 s
[2026-03-09 18:38:43] 2026-03-09 17:37:49,196 | INFO     | . initial setup = 4 s
[2026-03-09 18:38:43] 2026-03-09 17:37:49,196 | INFO     | . payload setup = 4 s
[2026-03-09 18:38:43] 2026-03-09 17:37:49,196 | INFO     | . stage-in = 0 s
[2026-03-09 18:38:43] 2026-03-09 17:37:49,196 | INFO     | . payload execution = 5820 s
[2026-03-09 18:38:43] 2026-03-09 17:37:49,196 | INFO     | . stage-out = 0 s
[2026-03-09 18:38:43] 2026-03-09 17:37:49,196 | INFO     | . log creation = 0 s
[2026-03-09 18:38:43] 2026-03-09 17:37:49,196 | INFO     | ..............................
[2026-03-09 18:38:43] 2026-03-09 17:37:49,242 | INFO     | 
[2026-03-09 18:38:43] 2026-03-09 17:37:49,245 | INFO     | job summary report
[2026-03-09 18:38:43] 2026-03-09 17:37:49,245 | INFO     | --------------------------------------------------
[2026-03-09 18:38:43] 2026-03-09 17:37:49,245 | INFO     | PanDA job id: 7035113584
[2026-03-09 18:38:43] 2026-03-09 17:37:49,245 | INFO     | task id: 48838462
[2026-03-09 18:38:43] 2026-03-09 17:37:49,246 | INFO     | errors: (none)
[2026-03-09 18:38:43] 2026-03-09 17:37:49,246 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 18:38:43] 2026-03-09 17:37:49,246 | INFO     | pilot state: finished 
[2026-03-09 18:38:43] 2026-03-09 17:37:49,246 | INFO     | transexitcode: 0
[2026-03-09 18:38:43] 2026-03-09 17:37:49,246 | INFO     | exeerrorcode: 0
[2026-03-09 18:38:43] 2026-03-09 17:37:49,246 | INFO     | exeerrordiag: 
[2026-03-09 18:38:43] 2026-03-09 17:37:49,246 | INFO     | exitcode: 0
[2026-03-09 18:38:43] 2026-03-09 17:37:49,246 | INFO     | exitmsg: OK
[2026-03-09 18:38:43] 2026-03-09 17:37:49,246 | INFO     | cpuconsumptiontime: 22392 s
[2026-03-09 18:38:43] 2026-03-09 17:37:49,246 | INFO     | nevents: 400
[2026-03-09 18:38:43] 2026-03-09 17:37:49,246 | INFO     | neventsw: 0
[2026-03-09 18:38:43] 2026-03-09 17:37:49,246 | INFO     | pid: 2995658
[2026-03-09 18:38:43] 2026-03-09 17:37:49,246 | INFO     | pgrp: 2995658
[2026-03-09 18:38:43] 2026-03-09 17:37:49,246 | INFO     | corecount: 4
[2026-03-09 18:38:43] 2026-03-09 17:37:49,246 | INFO     | event service: False
[2026-03-09 18:38:43] 2026-03-09 17:37:49,246 | INFO     | sizes: {0: 2280246, 11: 2280246, 5828: 2307003, 5830: 2316217}
[2026-03-09 18:38:43] 2026-03-09 17:37:49,246 | INFO     | --------------------------------------------------
[2026-03-09 18:38:43] 2026-03-09 17:37:49,246 | INFO     | 
[2026-03-09 18:38:43] 2026-03-09 17:37:49,246 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot36/slots/4
[2026-03-09 18:38:43] 2026-03-09 17:37:49,263 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 18:38:43] 2026-03-09 17:37:49,263 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 18:38:43] 2026-03-09 17:37:49,263 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 18:38:43] 2026-03-09 17:37:49,263 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 18:38:43] 2026-03-09 17:37:49,263 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 18:38:43] 2026-03-09 17:37:49,263 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 18:38:43] 2026-03-09 17:37:49,263 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 18:38:43] 2026-03-09 17:37:49,263 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 18:38:43] 2026-03-09 17:37:49,263 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 18:38:43] 2026-03-09 17:37:49,263 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 18:38:43] 2026-03-09 17:37:49,263 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 18:38:43] 2026-03-09 17:37:49,263 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 18:38:43] 2026-03-09 17:37:49,263 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 18:38:43] 2026-03-09 17:37:49,263 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 18:38:43] 2026-03-09 17:37:49,263 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 18:38:43] 2026-03-09 17:37:49,264 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 18:38:43] 2026-03-09 17:37:49,264 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 18:38:43] 2026-03-09 17:37:49,264 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 18:38:43] 2026-03-09 17:37:49,264 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 18:38:43] 2026-03-09 17:37:49,264 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 18:38:43] 2026-03-09 17:37:49,264 | INFO     | job 7035113584 has completed (purged errors)
[2026-03-09 18:38:43] 2026-03-09 17:37:49,264 | INFO     | overall cleanup function is called
[2026-03-09 18:38:43] 2026-03-09 17:37:50,270 | INFO     | --- collectZombieJob: --- 10, [2995658]
[2026-03-09 18:38:43] 2026-03-09 17:37:50,271 | INFO     | zombie collector waiting for pid 2995658
[2026-03-09 18:38:43] 2026-03-09 17:37:50,271 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 18:38:43] 2026-03-09 17:37:50,271 | INFO     | collected zombie processes
[2026-03-09 18:38:43] 2026-03-09 17:37:50,271 | INFO     | will attempt to kill all subprocesses of pid=2995658
[2026-03-09 18:38:43] 2026-03-09 17:37:50,692 | INFO     | process IDs to be killed: [2995658] (in reverse order)
[2026-03-09 18:38:43] 2026-03-09 17:37:50,897 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 18:38:43] 2026-03-09 17:37:50,897 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 18:38:43] 2026-03-09 17:37:50,921 | INFO     | did not find any defunct processes belonging to 2995658
[2026-03-09 18:38:43] 2026-03-09 17:37:50,945 | INFO     | did not find any defunct processes belonging to 2995658
[2026-03-09 18:38:43] 2026-03-09 17:37:50,945 | INFO     | ready for new job
[2026-03-09 18:38:43] 2026-03-09 17:37:50,945 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 18:38:43] 2026-03-09 17:37:50,946 | INFO     | **************************************
[2026-03-09 18:38:43] 2026-03-09 17:37:50,946 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 18:38:43] 2026-03-09 17:37:50,946 | INFO     | **************************************
[2026-03-09 18:38:43] 2026-03-09 17:37:50,947 | INFO     | 
[2026-03-09 18:38:43] 2026-03-09 17:37:50,952 | INFO     | architecture information:
[2026-03-09 18:38:43] 2026-03-09 17:37:50,952 | INFO     | executing command: cat /etc/os-release
[2026-03-09 18:38:43] 2026-03-09 17:37:50,966 | INFO     | cat /etc/os-release:
[2026-03-09 18:38:43] NAME="CentOS Linux"
[2026-03-09 18:38:43] VERSION="7 (Core)"
[2026-03-09 18:38:43] ID="centos"
[2026-03-09 18:38:43] ID_LIKE="rhel fedora"
[2026-03-09 18:38:43] VERSION_ID="7"
[2026-03-09 18:38:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 18:38:43] ANSI_COLOR="0;31"
[2026-03-09 18:38:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 18:38:43] HOME_URL="https://www.centos.org/"
[2026-03-09 18:38:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 18:38:43] 
[2026-03-09 18:38:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 18:38:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 18:38:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 18:38:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 18:38:43] 
[2026-03-09 18:38:43] 2026-03-09 17:37:50,966 | INFO     | **************************************
[2026-03-09 18:38:43] 2026-03-09 17:37:51,470 | INFO     | executing command: df -mP /var/lib/boinc/var/slot36/slots/4
[2026-03-09 18:38:43] 2026-03-09 17:37:51,486 | INFO     | sufficient remaining disk space (20249051136 B)
[2026-03-09 18:38:43] 2026-03-09 17:37:51,486 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 18:38:43] 2026-03-09 17:37:51,486 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 18:38:43] 2026-03-09 17:37:51,486 | INFO     | update_server=False
[2026-03-09 18:38:43] 2026-03-09 17:37:51,486 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 18:38:43] 2026-03-09 17:37:51,487 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 18:38:43] 2026-03-09 17:37:51,487 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 18:38:43] 2026-03-09 17:37:51,487 | INFO     | aborting loop
[2026-03-09 18:38:43] 2026-03-09 17:37:51,975 | INFO     | all job control threads have been joined
[2026-03-09 18:38:43] 2026-03-09 17:37:52,035 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 18:38:43] 2026-03-09 17:37:52,043 | INFO     | all data control threads have been joined
[2026-03-09 18:38:43] 2026-03-09 17:37:52,338 | INFO     | job.realtimelogging is not enabled
[2026-03-09 18:38:43] 2026-03-09 17:37:52,492 | INFO     | [job] retrieve thread has finished
[2026-03-09 18:38:43] 2026-03-09 17:37:52,492 | INFO     | [job] job monitor thread has finished
[2026-03-09 18:38:43] 2026-03-09 17:37:52,607 | INFO     | [job] validate thread has finished
[2026-03-09 18:38:43] 2026-03-09 17:37:52,674 | INFO     | [payload] failed_post thread has finished
[2026-03-09 18:38:43] 2026-03-09 17:37:52,682 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 18:38:43] 2026-03-09 17:37:52,804 | INFO     | [payload] validate_post thread has finished
[2026-03-09 18:38:43] 2026-03-09 17:37:52,845 | INFO     | all payload control threads have been joined
[2026-03-09 18:38:43] 2026-03-09 17:37:52,980 | INFO     | [job] control thread has finished
[2026-03-09 18:38:43] 2026-03-09 17:37:53,039 | INFO     | [data] copytool_in thread has finished
[2026-03-09 18:38:43] 2026-03-09 17:37:53,048 | INFO     | [data] control thread has finished
[2026-03-09 18:38:43] 2026-03-09 17:37:53,086 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 18:38:43] 2026-03-09 17:37:53,345 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 18:38:43] 2026-03-09 17:37:53,851 | INFO     | [payload] control thread has finished
[2026-03-09 18:38:43] 2026-03-09 17:37:53,964 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 18:38:43] 2026-03-09 17:37:54,040 | INFO     | [data] copytool_out thread has finished
[2026-03-09 18:38:43] 2026-03-09 17:37:54,253 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 18:38:43] 2026-03-09 17:37:55,258 | INFO     | [job] queue monitor thread has finished
[2026-03-09 18:38:43] 2026-03-09 17:37:55,492 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 18:38:43] 2026-03-09 17:38:21,118 | INFO     | PID=2989874 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 18:38:43] 2026-03-09 17:38:21,118 | INFO     | .. there are 59 such processes running
[2026-03-09 18:38:43] 2026-03-09 17:38:21,118 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 18:38:43] 2026-03-09 17:38:21,118 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 18:38:43] 2026-03-09 17:38:21,118 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 18:38:43] 2026-03-09 17:38:37,161 | INFO     | [monitor] cgroup control has ended
[2026-03-09 18:38:43] 2026-03-09 17:38:37,860 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22555727083328)>', '<ExcThread(monitor, started 22555421304576)>']
[2026-03-09 18:38:43] 2026-03-09 17:38:38,204 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 18:38:43] 2026-03-09 17:38:38,205 | INFO     | [monitor] control thread has ended
[2026-03-09 18:38:43] 2026-03-09 17:38:42,885 | INFO     | all workflow threads have been joined
[2026-03-09 18:38:43] 2026-03-09 17:38:42,886 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 18:38:43] 2026-03-09 17:38:42,886 | INFO     | traces error code: 0
[2026-03-09 18:38:43] 2026-03-09 17:38:42,886 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 18:38:43] 2026-03-09 17:38:42,999 [wrapper] ==== pilot stdout END ====
[2026-03-09 18:38:43] 2026-03-09 17:38:43,002 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 18:38:43] 2026-03-09 17:38:43,009 [wrapper] pilotpid: 2989874
[2026-03-09 18:38:43] 2026-03-09 17:38:43,012 [wrapper] Pilot exit status: 0
[2026-03-09 18:38:43] 2026-03-09 17:38:43,020 [wrapper] pandaids: 7035113584
[2026-03-09 18:38:43] 2026-03-09 17:38:43,134 [wrapper] cleanup supervisor_pilot 4050484 2989875
[2026-03-09 18:38:43] 2026-03-09 17:38:43,138 [wrapper] Test setup, not cleaning
[2026-03-09 18:38:43] 2026-03-09 17:38:43,140 [wrapper] apfmon messages muted
[2026-03-09 18:38:43] 2026-03-09 17:38:43,142 [wrapper] ==== wrapper stdout END ====
[2026-03-09 18:38:43] 2026-03-09 17:38:43,144 [wrapper] ==== wrapper stderr END ====
[2026-03-09 18:38:43]  *** Error codes and diagnostics ***
[2026-03-09 18:38:43]     "exeErrorCode": 0,
[2026-03-09 18:38:43]     "exeErrorDiag": "",
[2026-03-09 18:38:43]     "pilotErrorCode": 0,
[2026-03-09 18:38:43]     "pilotErrorDiag": "",
[2026-03-09 18:38:43]  *** Listing of results directory ***
[2026-03-09 18:38:43] total 490148
[2026-03-09 18:38:43] -rw-r--r--. 1 boinc boinc    584627 Mar  1 13:55 pilot3.tar.gz
[2026-03-09 18:38:43] -rw-r--r--. 1 boinc boinc      5111 Mar  1 14:45 queuedata.json
[2026-03-09 18:38:43] -rwx------. 1 boinc boinc     36322 Mar  1 14:45 runpilot2-wrapper.sh
[2026-03-09 18:38:43] -rw-r--r--. 1 boinc boinc       100 Mar  9 16:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 18:38:43] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 16:42 run_atlas
[2026-03-09 18:38:43] -rw-r--r--. 1 boinc boinc       105 Mar  9 16:42 job.xml
[2026-03-09 18:38:43] -rw-r--r--. 2 boinc boinc 278960148 Mar  9 17:00 EVNT.48220133._000158.pool.root.1
[2026-03-09 18:38:43] -rw-r--r--. 2 boinc boinc     15845 Mar  9 17:00 start_atlas.sh
[2026-03-09 18:38:43] drwxrwx--x. 2 boinc boinc      4096 Mar  9 17:00 shared
[2026-03-09 18:38:43] -rw-r--r--. 2 boinc boinc    597962 Mar  9 17:00 input.tar.gz
[2026-03-09 18:38:43] -rw-r--r--. 1 boinc boinc      6705 Mar  9 17:00 init_data.xml
[2026-03-09 18:38:43] -rw-r--r--. 1 boinc boinc         0 Mar  9 17:00 boinc_lockfile
[2026-03-09 18:38:43] -rw-r--r--. 1 boinc boinc      2562 Mar  9 17:00 pandaJob.out
[2026-03-09 18:38:43] -rw-------. 1 boinc boinc   1002554 Mar  9 17:00 agis_schedconf.cvmfs.json
[2026-03-09 18:38:43] -rw-------. 1 boinc boinc   1511578 Mar  9 17:00 agis_ddmendpoints.agis.ALL.json
[2026-03-09 18:38:43] -rw-------. 1 boinc boinc       444 Mar  9 17:00 workernode_map.json
[2026-03-09 18:38:43] drwx------. 5 boinc boinc      4096 Mar  9 17:00 pilot3
[2026-03-09 18:38:43] -rw-------. 1 boinc boinc 216777785 Mar  9 18:37 HITS.48838462._003540.pool.root.1
[2026-03-09 18:38:43] -rw-------. 1 boinc boinc        95 Mar  9 18:37 pilot_heartbeat.json
[2026-03-09 18:38:43] -rw-r--r--. 1 boinc boinc       529 Mar  9 18:37 boinc_task_state.xml
[2026-03-09 18:38:43] -rw-------. 1 boinc boinc      1032 Mar  9 18:37 memory_monitor_summary.json
[2026-03-09 18:38:43] -rw-------. 1 boinc boinc    272595 Mar  9 18:37 log.48838462._003540.job.log.tgz.1
[2026-03-09 18:38:43] -rw-------. 1 boinc boinc      6365 Mar  9 18:37 heartbeat.json
[2026-03-09 18:38:43] -rw-r--r--. 1 boinc boinc      8192 Mar  9 18:38 boinc_mmap_file
[2026-03-09 18:38:43] -rw-r--r--. 1 boinc boinc        27 Mar  9 18:38 wrapper_checkpoint.txt
[2026-03-09 18:38:43] -rw-------. 1 boinc boinc      4901 Mar  9 18:38 pilotlog.txt
[2026-03-09 18:38:43] -rw-------. 1 boinc boinc    847486 Mar  9 18:38 log.48838462._003540.job.log.1
[2026-03-09 18:38:43] -rw-------. 1 boinc boinc       357 Mar  9 18:38 output.list
[2026-03-09 18:38:43] -rw-r--r--. 1 boinc boinc       620 Mar  9 18:38 runtime_log
[2026-03-09 18:38:43] -rw-------. 1 boinc boinc   1136640 Mar  9 18:38 result.tar.gz
[2026-03-09 18:38:43] -rw-r--r--. 1 boinc boinc      9204 Mar  9 18:38 runtime_log.err
[2026-03-09 18:38:43] -rw-------. 1 boinc boinc       662 Mar  9 18:38 JLzNDmpHwG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmBTALDm38fZOm.diag
[2026-03-09 18:38:43] -rw-r--r--. 1 boinc boinc     20856 Mar  9 18:38 stderr.txt
[2026-03-09 18:38:43] HITS file was successfully produced:
[2026-03-09 18:38:43] -rw-------. 1 boinc boinc 216777785 Mar  9 18:37 shared/HITS.pool.root.1
[2026-03-09 18:38:43]  *** Contents of shared directory: ***
[2026-03-09 18:38:43] total 485844
[2026-03-09 18:38:43] -rw-r--r--. 2 boinc boinc 278960148 Mar  9 17:00 ATLAS.root_0
[2026-03-09 18:38:43] -rw-r--r--. 2 boinc boinc     15845 Mar  9 17:00 start_atlas.sh
[2026-03-09 18:38:43] -rw-r--r--. 2 boinc boinc    597962 Mar  9 17:00 input.tar.gz
[2026-03-09 18:38:43] -rw-------. 1 boinc boinc 216777785 Mar  9 18:37 HITS.pool.root.1
[2026-03-09 18:38:43] -rw-------. 1 boinc boinc   1136640 Mar  9 18:38 result.tar.gz
18:38:45 (2985354): run_atlas exited; CPU time 22644.402762
18:38:45 (2985354): called boinc_finish(0)

</stderr_txt>
]]>

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