Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:11:03 (3775526): wrapper (7.7.26015): starting
12:11:03 (3775526): wrapper: running run_atlas (--nthreads 8)
[2026-03-09 12:11:03] Arguments: --nthreads 8
[2026-03-09 12:11:03] Threads: 8
[2026-03-09 12:11:03] Checking for CVMFS
[2026-03-09 12:11:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 12:11:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 12:11:03] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 12:11:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 12:11:04] 2.13.3.0 7385 178529 331852 157081 3 618 29189119 32503809 54780 16776704 0 2031179946 99.618 2024551866 46612 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-09 12:11:04] CVMFS is ok
[2026-03-09 12:11:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 12:11:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 12:11:04] Further information can be found at the LHC@home message board.
[2026-03-09 12:11:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 12:11:04] Checking for apptainer binary...
[2026-03-09 12:11:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 12:11:04] Running /usr/bin/apptainer --version
[2026-03-09 12:11:04] apptainer version 1.4.5-2.el9
[2026-03-09 12:11:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 12:11:05] c8-7-1.aglt2.org
[2026-03-09 12:11:05] apptainer works
[2026-03-09 12:11:05] Set ATHENA_PROC_NUMBER=8
[2026-03-09 12:11:05] Set ATHENA_CORE_NUMBER=8
[2026-03-09 12:11:05] Starting ATLAS job with PandaID=7034593551
[2026-03-09 12:11:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 13:48:30]  *** The last 200 lines of the pilot log: ***
[2026-03-09 13:48:30]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-09 13:48:30]  is_altstaged=None
[2026-03-09 13:48:30]  is_tar=False
[2026-03-09 13:48:30]  lfn=log.48841707._001049.job.log.tgz.1
[2026-03-09 13:48:30]  mtime=0
[2026-03-09 13:48:30]  protocol_id=None
[2026-03-09 13:48:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-09 13:48:30]  replicas=None
[2026-03-09 13:48:30]  scope=mc23_13p6TeV
[2026-03-09 13:48:30]  status=None
[2026-03-09 13:48:30]  status_code=0
[2026-03-09 13:48:30]  storage_token=
[2026-03-09 13:48:30]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-7034593551/log.48841707._001049.job.log.tgz.1
[2026-03-09 13:48:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/10/fe/log.48841707._001049.job.log.tgz.1
[2026-03-09 13:48:30]  workdir=None
[2026-03-09 13:48:30] ]
[2026-03-09 13:48:30] 2026-03-09 17:47:15,831 | INFO     | transferring file log.48841707._001049.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-7034593551/log.48841707._001049.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-09 13:48:30] 2026-03-09 17:47:15,831 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-7034593551/log.48841707._001049.job.log.tgz.1 /tmp/boinchome/slots/1/log.48841707._001049.job
[2026-03-09 13:48:30] 2026-03-09 17:47:16,079 | INFO     | adding to output.list: log.48841707._001049.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/10/fe/log.48841707._001049.job.log.tg
[2026-03-09 13:48:30] 2026-03-09 17:47:16,080 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-09 13:48:30] 2026-03-09 17:47:16,080 | INFO     | summary of transferred files:
[2026-03-09 13:48:30] 2026-03-09 17:47:16,080 | INFO     |  -- lfn=log.48841707._001049.job.log.tgz.1, status_code=0, status=transferred
[2026-03-09 13:48:30] 2026-03-09 17:47:16,080 | INFO     | stage-out finished correctly
[2026-03-09 13:48:30] 2026-03-09 17:47:16,968 | INFO     | monitor loop #355: job 0:7034593551 is in state 'finished'
[2026-03-09 13:48:30] 2026-03-09 17:47:16,968 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-09 13:48:30] 2026-03-09 17:47:17,187 | INFO     | time since job start (5705s) is within the limit (349056.0s)
[2026-03-09 13:48:30] 2026-03-09 17:47:17,187 | INFO     | 5728s have passed since pilot start - server update state is 'RUNNING'
[2026-03-09 13:48:30] 2026-03-09 17:47:18,787 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-09 13:48:30] 2026-03-09 17:47:19,221 | INFO     | time since job start (5707s) is within the limit (349056.0s)
[2026-03-09 13:48:30] 2026-03-09 17:47:19,481 | INFO     | monitor loop #356: job 0:7034593551 is in state 'finished'
[2026-03-09 13:48:30] 2026-03-09 17:47:19,481 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-09 13:48:30] 2026-03-09 17:47:20,319 | INFO     | job 7034593551 has state=finished
[2026-03-09 13:48:30] 2026-03-09 17:47:20,319 | INFO     | preparing for final server update for job 7034593551 in state='finished'
[2026-03-09 13:48:30] 2026-03-09 17:47:20,319 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-7034593551/jobReport.json
[2026-03-09 13:48:30] 2026-03-09 17:47:20,321 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-03-09 13:48:30] 2026-03-09 17:47:20,321 | INFO     | this job has now completed (state=finished)
[2026-03-09 13:48:30] 2026-03-09 17:47:20,321 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 13:48:30] 2026-03-09 17:47:20,321 | INFO     | log transfer has been attempted: DONE
[2026-03-09 13:48:30] 2026-03-09 17:47:20,321 | INFO     | job 7034593551 has finished - writing final server update
[2026-03-09 13:48:30] 2026-03-09 17:47:20,321 | INFO     | total number of processed events: 400 (read)
[2026-03-09 13:48:30] 2026-03-09 17:47:20,368 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7034593551/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 13:48:30] 2026-03-09 17:47:20,369 | INFO     | extracted standard info from prmon json
[2026-03-09 13:48:30] 2026-03-09 17:47:20,369 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 13:48:30] 2026-03-09 17:47:20,369 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 13:48:30] 2026-03-09 17:47:20,369 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 13:48:30] 2026-03-09 17:47:20,369 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 13:48:30] 2026-03-09 17:47:20,370 | INFO     | fitting pss+swap vs Time
[2026-03-09 13:48:30] 2026-03-09 17:47:20,370 | INFO     | sum of square deviations: 197214561.31395346
[2026-03-09 13:48:30] 2026-03-09 17:47:20,370 | INFO     | sum of deviations: 828459084.6976743
[2026-03-09 13:48:30] 2026-03-09 17:47:20,371 | INFO     | mean x: 1773075666.5465117
[2026-03-09 13:48:30] 2026-03-09 17:47:20,371 | INFO     | mean y: 2564979.3255813955
[2026-03-09 13:48:30] 2026-03-09 17:47:20,387 | INFO     | intersect: -7445772679.0099535
[2026-03-09 13:48:30] 2026-03-09 17:47:20,388 | INFO     | chi2: 0.014539605637950197
[2026-03-09 13:48:30] 2026-03-09 17:47:20,388 | INFO     | current memory leak: 4.20 B/s (using 86 data points, chi2=0.01)
[2026-03-09 13:48:30] 2026-03-09 17:47:20,388 | INFO     | could have reported an average CPU frequency of 3796 MHz (7 samples)
[2026-03-09 13:48:30] 2026-03-09 17:47:20,388 | INFO     | ..............................
[2026-03-09 13:48:30] 2026-03-09 17:47:20,388 | INFO     | . Timing measurements:
[2026-03-09 13:48:30] 2026-03-09 17:47:20,388 | INFO     | . get job = 0 s
[2026-03-09 13:48:30] 2026-03-09 17:47:20,388 | INFO     | . initial setup = 23 s
[2026-03-09 13:48:30] 2026-03-09 17:47:20,388 | INFO     | . payload setup = 16 s
[2026-03-09 13:48:30] 2026-03-09 17:47:20,388 | INFO     | . stage-in = 0 s
[2026-03-09 13:48:30] 2026-03-09 17:47:20,388 | INFO     | . payload execution = 5678 s
[2026-03-09 13:48:30] 2026-03-09 17:47:20,388 | INFO     | . stage-out = 2 s
[2026-03-09 13:48:30] 2026-03-09 17:47:20,388 | INFO     | . log creation = 0 s
[2026-03-09 13:48:30] 2026-03-09 17:47:20,388 | INFO     | ..............................
[2026-03-09 13:48:30] 2026-03-09 17:47:20,443 | INFO     | 
[2026-03-09 13:48:30] 2026-03-09 17:47:20,443 | INFO     | job summary report
[2026-03-09 13:48:30] 2026-03-09 17:47:20,443 | INFO     | --------------------------------------------------
[2026-03-09 13:48:30] 2026-03-09 17:47:20,443 | INFO     | PanDA job id: 7034593551
[2026-03-09 13:48:30] 2026-03-09 17:47:20,443 | INFO     | task id: 48841707
[2026-03-09 13:48:30] 2026-03-09 17:47:20,443 | INFO     | errors: (none)
[2026-03-09 13:48:30] 2026-03-09 17:47:20,443 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 13:48:30] 2026-03-09 17:47:20,443 | INFO     | pilot state: finished 
[2026-03-09 13:48:30] 2026-03-09 17:47:20,443 | INFO     | transexitcode: 0
[2026-03-09 13:48:30] 2026-03-09 17:47:20,444 | INFO     | exeerrorcode: 0
[2026-03-09 13:48:30] 2026-03-09 17:47:20,444 | INFO     | exeerrordiag: 
[2026-03-09 13:48:30] 2026-03-09 17:47:20,444 | INFO     | exitcode: 0
[2026-03-09 13:48:30] 2026-03-09 17:47:20,444 | INFO     | exitmsg: OK
[2026-03-09 13:48:30] 2026-03-09 17:47:20,444 | INFO     | cpuconsumptiontime: 30794 s
[2026-03-09 13:48:30] 2026-03-09 17:47:20,444 | INFO     | nevents: 400
[2026-03-09 13:48:30] 2026-03-09 17:47:20,444 | INFO     | neventsw: 0
[2026-03-09 13:48:30] 2026-03-09 17:47:20,444 | INFO     | pid: 3796883
[2026-03-09 13:48:30] 2026-03-09 17:47:20,444 | INFO     | pgrp: 3796883
[2026-03-09 13:48:30] 2026-03-09 17:47:20,444 | INFO     | corecount: 8
[2026-03-09 13:48:30] 2026-03-09 17:47:20,444 | INFO     | event service: False
[2026-03-09 13:48:30] 2026-03-09 17:47:20,444 | INFO     | sizes: {0: 2280028, 1: 2280056, 5699: 2306651, 5702: 2315649, 5705: 2315705, 5707: 2315899}
[2026-03-09 13:48:30] 2026-03-09 17:47:20,444 | INFO     | --------------------------------------------------
[2026-03-09 13:48:30] 2026-03-09 17:47:20,444 | INFO     | 
[2026-03-09 13:48:30] 2026-03-09 17:47:20,444 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-09 13:48:30] 2026-03-09 17:47:20,474 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 13:48:30] 2026-03-09 17:47:20,474 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 13:48:30] 2026-03-09 17:47:20,474 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 13:48:30] 2026-03-09 17:47:20,474 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 13:48:30] 2026-03-09 17:47:20,474 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 13:48:30] 2026-03-09 17:47:20,474 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 13:48:30] 2026-03-09 17:47:20,474 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 13:48:30] 2026-03-09 17:47:20,474 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 13:48:30] 2026-03-09 17:47:20,474 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 13:48:30] 2026-03-09 17:47:20,475 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 13:48:30] 2026-03-09 17:47:20,475 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 13:48:30] 2026-03-09 17:47:20,475 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 13:48:30] 2026-03-09 17:47:20,475 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 13:48:30] 2026-03-09 17:47:20,475 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 13:48:30] 2026-03-09 17:47:20,475 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 13:48:30] 2026-03-09 17:47:20,475 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 13:48:30] 2026-03-09 17:47:20,475 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 13:48:30] 2026-03-09 17:47:20,475 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 13:48:30] 2026-03-09 17:47:20,475 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 13:48:30] 2026-03-09 17:47:20,475 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 13:48:30] 2026-03-09 17:47:20,475 | INFO     | job 7034593551 has completed (purged errors)
[2026-03-09 13:48:30] 2026-03-09 17:47:20,475 | INFO     | overall cleanup function is called
[2026-03-09 13:48:30] 2026-03-09 17:47:21,482 | INFO     | --- collectZombieJob: --- 10, [3796883]
[2026-03-09 13:48:30] 2026-03-09 17:47:21,482 | INFO     | zombie collector waiting for pid 3796883
[2026-03-09 13:48:30] 2026-03-09 17:47:21,482 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 13:48:30] 2026-03-09 17:47:21,483 | INFO     | collected zombie processes
[2026-03-09 13:48:30] 2026-03-09 17:47:21,483 | INFO     | will attempt to kill all subprocesses of pid=3796883
[2026-03-09 13:48:30] 2026-03-09 17:47:23,037 | INFO     | process IDs to be killed: [3796883] (in reverse order)
[2026-03-09 13:48:30] 2026-03-09 17:47:24,151 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 13:48:30] 2026-03-09 17:47:24,151 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 13:48:30] 2026-03-09 17:47:24,319 | INFO     | did not find any defunct processes belonging to 3796883
[2026-03-09 13:48:30] 2026-03-09 17:47:24,479 | INFO     | did not find any defunct processes belonging to 3796883
[2026-03-09 13:48:30] 2026-03-09 17:47:24,479 | INFO     | ready for new job
[2026-03-09 13:48:30] 2026-03-09 17:47:24,479 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 13:48:30] 2026-03-09 17:47:24,480 | INFO     | **************************************
[2026-03-09 13:48:30] 2026-03-09 17:47:24,502 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 13:48:30] 2026-03-09 17:47:24,502 | INFO     | **************************************
[2026-03-09 13:48:30] 2026-03-09 17:47:24,502 | INFO     | 
[2026-03-09 13:48:30] 2026-03-09 17:47:24,536 | INFO     | architecture information:
[2026-03-09 13:48:30] 2026-03-09 17:47:24,540 | INFO     | executing command: cat /etc/os-release
[2026-03-09 13:48:30] 2026-03-09 17:47:24,571 | INFO     | cat /etc/os-release:
[2026-03-09 13:48:30] NAME="CentOS Linux"
[2026-03-09 13:48:30] VERSION="7 (Core)"
[2026-03-09 13:48:30] ID="centos"
[2026-03-09 13:48:30] ID_LIKE="rhel fedora"
[2026-03-09 13:48:30] VERSION_ID="7"
[2026-03-09 13:48:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 13:48:30] ANSI_COLOR="0;31"
[2026-03-09 13:48:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 13:48:30] HOME_URL="https://www.centos.org/"
[2026-03-09 13:48:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 13:48:30] 
[2026-03-09 13:48:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 13:48:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 13:48:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 13:48:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 13:48:30] 
[2026-03-09 13:48:30] 2026-03-09 17:47:24,572 | INFO     | **************************************
[2026-03-09 13:48:30] 2026-03-09 17:47:25,075 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-09 13:48:30] 2026-03-09 17:47:25,154 | INFO     | sufficient remaining disk space (91627716608 B)
[2026-03-09 13:48:30] 2026-03-09 17:47:25,154 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 13:48:30] 2026-03-09 17:47:25,154 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 13:48:30] 2026-03-09 17:47:25,154 | INFO     | update_server=False
[2026-03-09 13:48:30] 2026-03-09 17:47:25,154 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 13:48:30] 2026-03-09 17:47:25,155 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 13:48:30] 2026-03-09 17:47:25,155 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 13:48:30] 2026-03-09 17:47:25,497 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 13:48:30] 2026-03-09 17:47:25,558 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 13:48:30] 2026-03-09 17:47:25,558 | INFO     | aborting loop
[2026-03-09 13:48:30] 2026-03-09 17:47:25,907 | INFO     | all job control threads have been joined
[2026-03-09 13:48:30] 2026-03-09 17:47:26,095 | INFO     | all payload control threads have been joined
[2026-03-09 13:48:30] 2026-03-09 17:47:26,160 | INFO     | [job] retrieve thread has finished
[2026-03-09 13:48:30] 2026-03-09 17:47:26,198 | INFO     | all data control threads have been joined
[2026-03-09 13:48:30] 2026-03-09 17:47:26,312 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 13:48:30] 2026-03-09 17:47:26,511 | INFO     | [job] queue monitor thread has finished
[2026-03-09 13:48:30] 2026-03-09 17:47:26,563 | INFO     | [job] job monitor thread has finished
[2026-03-09 13:48:30] 2026-03-09 17:47:26,739 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 13:48:30] 2026-03-09 17:47:26,887 | INFO     | [data] copytool_in thread has finished
[2026-03-09 13:48:30] 2026-03-09 17:47:26,888 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 13:48:30] 2026-03-09 17:47:26,913 | INFO     | [job] control thread has finished
[2026-03-09 13:48:30] 2026-03-09 17:47:26,953 | INFO     | [payload] failed_post thread has finished
[2026-03-09 13:48:30] 2026-03-09 17:47:27,101 | INFO     | [payload] control thread has finished
[2026-03-09 13:48:30] 2026-03-09 17:47:27,162 | INFO     | [data] copytool_out thread has finished
[2026-03-09 13:48:30] 2026-03-09 17:47:27,204 | INFO     | [data] control thread has finished
[2026-03-09 13:48:30] 2026-03-09 17:47:27,245 | INFO     | [job] validate thread has finished
[2026-03-09 13:48:30] 2026-03-09 17:47:27,353 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 13:48:30] 2026-03-09 17:47:27,461 | INFO     | [payload] validate_post thread has finished
[2026-03-09 13:48:30] 2026-03-09 17:47:29,167 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 13:48:30] 2026-03-09 17:47:55,400 | INFO     | PID=3783233 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 13:48:30] 2026-03-09 17:47:55,400 | INFO     | .. there are 74 such processes running
[2026-03-09 13:48:30] 2026-03-09 17:47:55,404 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 13:48:30] 2026-03-09 17:47:55,404 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 13:48:30] 2026-03-09 17:47:55,404 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 13:48:30] 2026-03-09 17:48:21,530 | INFO     | [monitor] cgroup control has ended
[2026-03-09 13:48:30] 2026-03-09 17:48:21,809 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140121178031936)>', '<ExcThread(monitor, started 140120903927552)>']
[2026-03-09 13:48:30] 2026-03-09 17:48:22,566 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 13:48:30] 2026-03-09 17:48:22,566 | INFO     | [monitor] control thread has ended
[2026-03-09 13:48:30] 2026-03-09 17:48:26,854 | INFO     | all workflow threads have been joined
[2026-03-09 13:48:30] 2026-03-09 17:48:26,854 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 13:48:30] 2026-03-09 17:48:26,854 | INFO     | traces error code: 0
[2026-03-09 13:48:30] 2026-03-09 17:48:26,854 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 13:48:30] 2026-03-09 17:48:28,697 [wrapper] ==== pilot stdout END ====
[2026-03-09 13:48:30] 2026-03-09 17:48:28,746 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 13:48:30] 2026-03-09 17:48:28,787 [wrapper] pilotpid: 3783233
[2026-03-09 13:48:30] 2026-03-09 17:48:28,836 [wrapper] Pilot exit status: 0
[2026-03-09 13:48:30] 2026-03-09 17:48:29,150 [wrapper] pandaids: 7034593551
[2026-03-09 13:48:30] 2026-03-09 17:48:29,926 [wrapper] cleanup supervisor_pilot  631130 3783234
[2026-03-09 13:48:30] 2026-03-09 17:48:29,956 [wrapper] Test setup, not cleaning
[2026-03-09 13:48:30] 2026-03-09 17:48:30,008 [wrapper] apfmon messages muted
[2026-03-09 13:48:30] 2026-03-09 17:48:30,051 [wrapper] ==== wrapper stdout END ====
[2026-03-09 13:48:30] 2026-03-09 17:48:30,090 [wrapper] ==== wrapper stderr END ====
[2026-03-09 13:48:30]  *** Error codes and diagnostics ***
[2026-03-09 13:48:30]     "exeErrorCode": 0,
[2026-03-09 13:48:30]     "exeErrorDiag": "",
[2026-03-09 13:48:30]     "pilotErrorCode": 0,
[2026-03-09 13:48:30]     "pilotErrorDiag": "",
[2026-03-09 13:48:30]  *** Listing of results directory ***
[2026-03-09 13:48:30] total 567680
[2026-03-09 13:48:30] -rw-r--r--. 1 boincer umatlas    584627 Mar  1 02:27 pilot3.tar.gz
[2026-03-09 13:48:30] -rwx------. 1 boincer umatlas     36322 Mar  1 02:28 runpilot2-wrapper.sh
[2026-03-09 13:48:30] -rw-r--r--. 1 boincer umatlas      5111 Mar  1 02:29 queuedata.json
[2026-03-09 13:48:30] -rw-r--r--. 1 boincer umatlas       100 Mar  9 12:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 13:48:30] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  9 12:11 run_atlas
[2026-03-09 13:48:30] -rw-r--r--. 1 boincer umatlas       105 Mar  9 12:11 job.xml
[2026-03-09 13:48:30] -rw-r--r--. 2 boincer umatlas 314954905 Mar  9 12:11 EVNT.48252644._000005.pool.root.1
[2026-03-09 13:48:30] -rw-r--r--. 2 boincer umatlas     15845 Mar  9 12:11 start_atlas.sh
[2026-03-09 13:48:30] drwxrwx--x. 2 boincer umatlas      4096 Mar  9 12:11 shared
[2026-03-09 13:48:30] -rw-r--r--. 2 boincer umatlas    597953 Mar  9 12:11 input.tar.gz
[2026-03-09 13:48:30] -rw-r--r--. 1 boincer umatlas         0 Mar  9 12:11 boinc_lockfile
[2026-03-09 13:48:30] -rw-r--r--. 1 boincer umatlas      2489 Mar  9 12:11 pandaJob.out
[2026-03-09 13:48:30] -rw-------. 1 boincer umatlas        57 Mar  9 12:11 setup.sh.local
[2026-03-09 13:48:30] -rw-------. 1 boincer umatlas   1002554 Mar  9 12:11 agis_schedconf.cvmfs.json
[2026-03-09 13:48:30] -rw-------. 1 boincer umatlas   1511578 Mar  9 12:11 agis_ddmendpoints.agis.ALL.json
[2026-03-09 13:48:30] -rw-------. 1 boincer umatlas       430 Mar  9 12:12 workernode_map.json
[2026-03-09 13:48:30] drwx------. 5 boincer umatlas      4096 Mar  9 12:12 pilot3
[2026-03-09 13:48:30] -rw-------. 1 boincer umatlas 260217910 Mar  9 13:46 HITS.48841707._001049.pool.root.1
[2026-03-09 13:48:30] -rw-r--r--. 1 boincer umatlas       529 Mar  9 13:46 boinc_task_state.xml
[2026-03-09 13:48:30] -rw-------. 1 boincer umatlas      1034 Mar  9 13:47 memory_monitor_summary.json
[2026-03-09 13:48:30] -rw-------. 1 boincer umatlas    336905 Mar  9 13:47 log.48841707._001049.job.log.tgz.1
[2026-03-09 13:48:30] -rw-------. 1 boincer umatlas      6314 Mar  9 13:47 heartbeat.json
[2026-03-09 13:48:30] -rw-------. 1 boincer umatlas        95 Mar  9 13:47 pilot_heartbeat.json
[2026-03-09 13:48:30] -rw-r--r--. 1 boincer umatlas      7170 Mar  9 13:47 init_data.xml
[2026-03-09 13:48:30] -rw-------. 1 boincer umatlas      4820 Mar  9 13:48 pilotlog.txt
[2026-03-09 13:48:30] -rw-r--r--. 1 boincer umatlas      8192 Mar  9 13:48 boinc_mmap_file
[2026-03-09 13:48:30] -rw-r--r--. 1 boincer umatlas        27 Mar  9 13:48 wrapper_checkpoint.txt
[2026-03-09 13:48:30] -rw-------. 1 boincer umatlas    760186 Mar  9 13:48 log.48841707._001049.job.log.1
[2026-03-09 13:48:30] -rw-------. 1 boincer umatlas       357 Mar  9 13:48 output.list
[2026-03-09 13:48:30] -rw-r--r--. 1 boincer umatlas       620 Mar  9 13:48 runtime_log
[2026-03-09 13:48:30] -rw-------. 1 boincer umatlas   1116160 Mar  9 13:48 result.tar.gz
[2026-03-09 13:48:30] -rw-r--r--. 1 boincer umatlas      9331 Mar  9 13:48 runtime_log.err
[2026-03-09 13:48:30] -rw-------. 1 boincer umatlas       650 Mar  9 13:48 FhaLDmJPqG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmcU7KDmJcHAbm.diag
[2026-03-09 13:48:30] -rw-r--r--. 1 boincer umatlas     21481 Mar  9 13:48 stderr.txt
[2026-03-09 13:48:30] HITS file was successfully produced:
[2026-03-09 13:48:30] -rw-------. 1 boincer umatlas 260217910 Mar  9 13:46 shared/HITS.pool.root.1
[2026-03-09 13:48:30]  *** Contents of shared directory: ***
[2026-03-09 13:48:30] total 563392
[2026-03-09 13:48:30] -rw-r--r--. 2 boincer umatlas 314954905 Mar  9 12:11 ATLAS.root_0
[2026-03-09 13:48:30] -rw-r--r--. 2 boincer umatlas     15845 Mar  9 12:11 start_atlas.sh
[2026-03-09 13:48:30] -rw-r--r--. 2 boincer umatlas    597953 Mar  9 12:11 input.tar.gz
[2026-03-09 13:48:30] -rw-------. 1 boincer umatlas 260217910 Mar  9 13:46 HITS.pool.root.1
[2026-03-09 13:48:30] -rw-------. 1 boincer umatlas   1116160 Mar  9 13:48 result.tar.gz
13:48:31 (3775526): run_atlas exited; CPU time 30994.765123
13:48:31 (3775526): called boinc_finish(0)

</stderr_txt>
]]>

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