Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
10:25:49 (646848): wrapper (7.7.26015): starting
10:25:49 (646848): wrapper: running run_atlas (--nthreads 8)
[2026-03-09 10:25:49] Arguments: --nthreads 8
[2026-03-09 10:25:49] Threads: 8
[2026-03-09 10:25:49] Checking for CVMFS
[2026-03-09 10:25:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 10:25:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 10:25:50] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 10:25:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 10:25:50] 2.13.0.0 489016 120 52644 157085 0 188 3530357 6144001 7375 130560 0 357420 99.989 9954 98 http://s1sampa-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-09 10:25:50] CVMFS is ok
[2026-03-09 10:25:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 10:25:50] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-09 10:25:50] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-09 10:25:50] Further information can be found at the LHC@home message board.
[2026-03-09 10:25:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 10:25:50] Checking for apptainer binary...
[2026-03-09 10:25:50] apptainer is not installed, using version from CVMFS
[2026-03-09 10:25:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 10:25:51] mz32
[2026-03-09 10:25:51] apptainer works
[2026-03-09 10:25:51] Set ATHENA_PROC_NUMBER=8
[2026-03-09 10:25:51] Set ATHENA_CORE_NUMBER=8
[2026-03-09 10:25:51] Starting ATLAS job with PandaID=7035003754
[2026-03-09 10:25:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/25 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 11:51:25]  *** The last 200 lines of the pilot log: ***
[2026-03-09 11:51:25]  filesize=330233
[2026-03-09 11:51:25]  filetype=log
[2026-03-09 11:51:25]  guid=5b4596b2-cb58-4cfe-a07b-b7cba7aff554
[2026-03-09 11:51:25]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-09 11:51:25]  is_altstaged=None
[2026-03-09 11:51:25]  is_tar=False
[2026-03-09 11:51:25]  lfn=log.48700906._002388.job.log.tgz.1
[2026-03-09 11:51:25]  mtime=0
[2026-03-09 11:51:25]  protocol_id=None
[2026-03-09 11:51:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-09 11:51:25]  replicas=None
[2026-03-09 11:51:25]  scope=mc23_13p6TeV
[2026-03-09 11:51:25]  status=None
[2026-03-09 11:51:25]  status_code=0
[2026-03-09 11:51:25]  storage_token=
[2026-03-09 11:51:25]  surl=/var/lib/boinc-client/slots/25/PanDA_Pilot-7035003754/log.48700906._002388.job.log.tgz.1
[2026-03-09 11:51:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f8/ca/log.48700906._002388.job.log.tgz.1
[2026-03-09 11:51:25]  workdir=None
[2026-03-09 11:51:25] ]
[2026-03-09 11:51:25] 2026-03-09 18:50:35,060 | INFO     | transferring file log.48700906._002388.job.log.tgz.1 from /var/lib/boinc-client/slots/25/PanDA_Pilot-7035003754/log.48700906._002388.job.log.tgz.1 to /var/lib/boin
[2026-03-09 11:51:25] 2026-03-09 18:50:35,060 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/25/PanDA_Pilot-7035003754/log.48700906._002388.job.log.tgz.1 /var/lib/boinc-client/slots/25/log.4870
[2026-03-09 11:51:25] 2026-03-09 18:50:35,084 | INFO     | adding to output.list: log.48700906._002388.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f8/ca/log.48700906._002388.job.log.tg
[2026-03-09 11:51:25] 2026-03-09 18:50:35,086 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-09 11:51:25] 2026-03-09 18:50:35,086 | INFO     | summary of transferred files:
[2026-03-09 11:51:25] 2026-03-09 18:50:35,086 | INFO     |  -- lfn=log.48700906._002388.job.log.tgz.1, status_code=0, status=transferred
[2026-03-09 11:51:25] 2026-03-09 18:50:35,086 | INFO     | stage-out finished correctly
[2026-03-09 11:51:25] 2026-03-09 18:50:35,213 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-09 11:51:25] 2026-03-09 18:50:36,017 | INFO     | monitor loop #362: job 0:7035003754 is in state 'finished'
[2026-03-09 11:51:25] 2026-03-09 18:50:36,018 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-09 11:51:25] 2026-03-09 18:50:36,072 | INFO     | PID=651062 has CPU usage=18.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 11:51:25] 2026-03-09 18:50:36,073 | INFO     | .. there are 12 such processes running
[2026-03-09 11:51:25] 2026-03-09 18:50:36,386 | INFO     | job 7035003754 has state=finished
[2026-03-09 11:51:25] 2026-03-09 18:50:36,387 | INFO     | preparing for final server update for job 7035003754 in state='finished'
[2026-03-09 11:51:25] 2026-03-09 18:50:36,387 | INFO     | reading metadata from: /var/lib/boinc-client/slots/25/PanDA_Pilot-7035003754/jobReport.json
[2026-03-09 11:51:25] 2026-03-09 18:50:36,388 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/25/workernode_map.json
[2026-03-09 11:51:25] 2026-03-09 18:50:36,389 | INFO     | this job has now completed (state=finished)
[2026-03-09 11:51:25] 2026-03-09 18:50:36,389 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 11:51:25] 2026-03-09 18:50:36,389 | INFO     | log transfer has been attempted: DONE
[2026-03-09 11:51:25] 2026-03-09 18:50:36,389 | INFO     | job 7035003754 has finished - writing final server update
[2026-03-09 11:51:25] 2026-03-09 18:50:36,389 | INFO     | total number of processed events: 400 (read)
[2026-03-09 11:51:25] 2026-03-09 18:50:36,414 | INFO     | using path: /var/lib/boinc-client/slots/25/PanDA_Pilot-7035003754/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 11:51:25] 2026-03-09 18:50:36,415 | INFO     | extracted standard info from prmon json
[2026-03-09 11:51:25] 2026-03-09 18:50:36,415 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 11:51:25] 2026-03-09 18:50:36,415 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 11:51:25] 2026-03-09 18:50:36,415 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 11:51:25] 2026-03-09 18:50:36,415 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 11:51:25] 2026-03-09 18:50:36,417 | INFO     | fitting pss+swap vs Time
[2026-03-09 11:51:25] 2026-03-09 18:50:36,418 | INFO     | sum of square deviations: 136095575.0
[2026-03-09 11:51:25] 2026-03-09 18:50:36,418 | INFO     | sum of deviations: -2232813286.5
[2026-03-09 11:51:25] 2026-03-09 18:50:36,418 | INFO     | mean x: 1773079788.5
[2026-03-09 11:51:25] 2026-03-09 18:50:36,418 | INFO     | mean y: 2519459.460526316
[2026-03-09 11:51:25] 2026-03-09 18:50:36,418 | INFO     | intersect: 29092047974.898373
[2026-03-09 11:51:25] 2026-03-09 18:50:36,418 | INFO     | chi2: 0.017732602458145143
[2026-03-09 11:51:25] 2026-03-09 18:50:36,419 | INFO     | current memory leak: -16.41 B/s (using 76 data points, chi2=0.02)
[2026-03-09 11:51:25] 2026-03-09 18:50:36,419 | INFO     | could have reported an average CPU frequency of 1996 MHz (6 samples)
[2026-03-09 11:51:25] 2026-03-09 18:50:36,419 | INFO     | ..............................
[2026-03-09 11:51:25] 2026-03-09 18:50:36,419 | INFO     | . Timing measurements:
[2026-03-09 11:51:25] 2026-03-09 18:50:36,419 | INFO     | . get job = 0 s
[2026-03-09 11:51:25] 2026-03-09 18:50:36,419 | INFO     | . initial setup = 8 s
[2026-03-09 11:51:25] 2026-03-09 18:50:36,419 | INFO     | . payload setup = 7 s
[2026-03-09 11:51:25] 2026-03-09 18:50:36,419 | INFO     | . stage-in = 0 s
[2026-03-09 11:51:25] 2026-03-09 18:50:36,419 | INFO     | . payload execution = 5040 s
[2026-03-09 11:51:25] 2026-03-09 18:50:36,420 | INFO     | . stage-out = 0 s
[2026-03-09 11:51:25] 2026-03-09 18:50:36,420 | INFO     | . log creation = 0 s
[2026-03-09 11:51:25] 2026-03-09 18:50:36,420 | INFO     | ..............................
[2026-03-09 11:51:25] 2026-03-09 18:50:36,715 | INFO     | 
[2026-03-09 11:51:25] 2026-03-09 18:50:36,715 | INFO     | job summary report
[2026-03-09 11:51:25] 2026-03-09 18:50:36,715 | INFO     | --------------------------------------------------
[2026-03-09 11:51:25] 2026-03-09 18:50:36,715 | INFO     | PanDA job id: 7035003754
[2026-03-09 11:51:25] 2026-03-09 18:50:36,716 | INFO     | task id: 48700906
[2026-03-09 11:51:25] 2026-03-09 18:50:36,716 | INFO     | errors: (none)
[2026-03-09 11:51:25] 2026-03-09 18:50:36,716 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 11:51:25] 2026-03-09 18:50:36,716 | INFO     | pilot state: finished 
[2026-03-09 11:51:25] 2026-03-09 18:50:36,716 | INFO     | transexitcode: 0
[2026-03-09 11:51:25] 2026-03-09 18:50:36,716 | INFO     | exeerrorcode: 0
[2026-03-09 11:51:25] 2026-03-09 18:50:36,716 | INFO     | exeerrordiag: 
[2026-03-09 11:51:25] 2026-03-09 18:50:36,716 | INFO     | exitcode: 0
[2026-03-09 11:51:25] 2026-03-09 18:50:36,717 | INFO     | exitmsg: OK
[2026-03-09 11:51:25] 2026-03-09 18:50:36,717 | INFO     | cpuconsumptiontime: 36308 s
[2026-03-09 11:51:25] 2026-03-09 18:50:36,717 | INFO     | nevents: 400
[2026-03-09 11:51:25] 2026-03-09 18:50:36,717 | INFO     | neventsw: 0
[2026-03-09 11:51:25] 2026-03-09 18:50:36,717 | INFO     | pid: 656124
[2026-03-09 11:51:25] 2026-03-09 18:50:36,717 | INFO     | pgrp: 656124
[2026-03-09 11:51:25] 2026-03-09 18:50:36,717 | INFO     | corecount: 8
[2026-03-09 11:51:25] 2026-03-09 18:50:36,717 | INFO     | event service: False
[2026-03-09 11:51:25] 2026-03-09 18:50:36,717 | INFO     | sizes: {0: 2279698, 1: 2280159, 11: 2280159, 5051: 2306384, 5052: 2315454, 5053: 2315592}
[2026-03-09 11:51:25] 2026-03-09 18:50:36,717 | INFO     | --------------------------------------------------
[2026-03-09 11:51:25] 2026-03-09 18:50:36,718 | INFO     | 
[2026-03-09 11:51:25] 2026-03-09 18:50:36,718 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/25
[2026-03-09 11:51:25] 2026-03-09 18:50:36,747 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 11:51:25] 2026-03-09 18:50:36,747 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 11:51:25] 2026-03-09 18:50:36,747 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 11:51:25] 2026-03-09 18:50:36,747 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 11:51:25] 2026-03-09 18:50:36,747 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 11:51:25] 2026-03-09 18:50:36,748 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 11:51:25] 2026-03-09 18:50:36,748 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 11:51:25] 2026-03-09 18:50:36,748 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 11:51:25] 2026-03-09 18:50:36,748 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 11:51:25] 2026-03-09 18:50:36,748 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 11:51:25] 2026-03-09 18:50:36,748 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 11:51:25] 2026-03-09 18:50:36,748 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 11:51:25] 2026-03-09 18:50:36,748 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 11:51:25] 2026-03-09 18:50:36,748 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 11:51:25] 2026-03-09 18:50:36,749 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 11:51:25] 2026-03-09 18:50:36,749 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 11:51:25] 2026-03-09 18:50:36,749 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 11:51:25] 2026-03-09 18:50:36,749 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 11:51:25] 2026-03-09 18:50:36,749 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 11:51:25] 2026-03-09 18:50:36,749 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 11:51:25] 2026-03-09 18:50:36,750 | INFO     | job 7035003754 has completed (purged errors)
[2026-03-09 11:51:25] 2026-03-09 18:50:36,750 | INFO     | overall cleanup function is called
[2026-03-09 11:51:25] 2026-03-09 18:50:37,759 | INFO     | --- collectZombieJob: --- 10, [656124]
[2026-03-09 11:51:25] 2026-03-09 18:50:37,759 | INFO     | zombie collector waiting for pid 656124
[2026-03-09 11:51:25] 2026-03-09 18:50:37,760 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 11:51:25] 2026-03-09 18:50:37,760 | INFO     | collected zombie processes
[2026-03-09 11:51:25] 2026-03-09 18:50:37,760 | INFO     | will attempt to kill all subprocesses of pid=656124
[2026-03-09 11:51:25] 2026-03-09 18:50:38,273 | INFO     | process IDs to be killed: [656124] (in reverse order)
[2026-03-09 11:51:25] 2026-03-09 18:50:38,409 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 11:51:25] 2026-03-09 18:50:38,409 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 11:51:25] 2026-03-09 18:50:38,423 | INFO     | did not find any defunct processes belonging to 656124
[2026-03-09 11:51:25] 2026-03-09 18:50:38,435 | INFO     | did not find any defunct processes belonging to 656124
[2026-03-09 11:51:25] 2026-03-09 18:50:38,436 | INFO     | ready for new job
[2026-03-09 11:51:25] 2026-03-09 18:50:38,436 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 11:51:25] 2026-03-09 18:50:38,437 | INFO     | **************************************
[2026-03-09 11:51:25] 2026-03-09 18:50:38,438 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 11:51:25] 2026-03-09 18:50:38,438 | INFO     | **************************************
[2026-03-09 11:51:25] 2026-03-09 18:50:38,438 | INFO     | 
[2026-03-09 11:51:25] 2026-03-09 18:50:38,447 | INFO     | architecture information:
[2026-03-09 11:51:25] 2026-03-09 18:50:38,447 | INFO     | executing command: cat /etc/os-release
[2026-03-09 11:51:25] 2026-03-09 18:50:38,471 | INFO     | cat /etc/os-release:
[2026-03-09 11:51:25] NAME="CentOS Linux"
[2026-03-09 11:51:25] VERSION="7 (Core)"
[2026-03-09 11:51:25] ID="centos"
[2026-03-09 11:51:25] ID_LIKE="rhel fedora"
[2026-03-09 11:51:25] VERSION_ID="7"
[2026-03-09 11:51:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 11:51:25] ANSI_COLOR="0;31"
[2026-03-09 11:51:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 11:51:25] HOME_URL="https://www.centos.org/"
[2026-03-09 11:51:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 11:51:25] 
[2026-03-09 11:51:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 11:51:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 11:51:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 11:51:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 11:51:25] 
[2026-03-09 11:51:25] 2026-03-09 18:50:38,471 | INFO     | **************************************
[2026-03-09 11:51:25] 2026-03-09 18:50:38,973 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/25
[2026-03-09 11:51:25] 2026-03-09 18:50:39,000 | INFO     | sufficient remaining disk space (364187222016 B)
[2026-03-09 11:51:25] 2026-03-09 18:50:39,000 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 11:51:25] 2026-03-09 18:50:39,001 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 11:51:25] 2026-03-09 18:50:39,001 | INFO     | update_server=False
[2026-03-09 11:51:25] 2026-03-09 18:50:39,001 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 11:51:25] 2026-03-09 18:50:39,001 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 11:51:25] 2026-03-09 18:50:39,159 | INFO     | all payload control threads have been joined
[2026-03-09 11:51:25] 2026-03-09 18:50:39,525 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 11:51:25] 2026-03-09 18:50:39,525 | INFO     | aborting loop
[2026-03-09 11:51:25] 2026-03-09 18:50:39,751 | INFO     | all data control threads have been joined
[2026-03-09 11:51:25] 2026-03-09 18:50:40,005 | INFO     | [job] retrieve thread has finished
[2026-03-09 11:51:25] 2026-03-09 18:50:40,153 | INFO     | [data] copytool_in thread has finished
[2026-03-09 11:51:25] 2026-03-09 18:50:40,164 | INFO     | [payload] control thread has finished
[2026-03-09 11:51:25] 2026-03-09 18:50:40,322 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 11:51:25] 2026-03-09 18:50:40,384 | INFO     | [payload] failed_post thread has finished
[2026-03-09 11:51:25] 2026-03-09 18:50:40,448 | INFO     | all job control threads have been joined
[2026-03-09 11:51:25] 2026-03-09 18:50:40,530 | INFO     | [job] job monitor thread has finished
[2026-03-09 11:51:25] 2026-03-09 18:50:40,756 | INFO     | [data] control thread has finished
[2026-03-09 11:51:25] 2026-03-09 18:50:40,817 | INFO     | [job] validate thread has finished
[2026-03-09 11:51:25] 2026-03-09 18:50:40,834 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 11:51:25] 2026-03-09 18:50:41,007 | INFO     | [data] copytool_out thread has finished
[2026-03-09 11:51:25] 2026-03-09 18:50:41,120 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 11:51:25] 2026-03-09 18:50:41,334 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 11:51:25] 2026-03-09 18:50:41,365 | INFO     | [payload] validate_post thread has finished
[2026-03-09 11:51:25] 2026-03-09 18:50:41,374 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 11:51:25] 2026-03-09 18:50:41,453 | INFO     | [job] control thread has finished
[2026-03-09 11:51:25] 2026-03-09 18:50:41,518 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 11:51:25] 2026-03-09 18:50:42,524 | INFO     | [job] queue monitor thread has finished
[2026-03-09 11:51:25] 2026-03-09 18:50:45,340 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 11:51:25] 2026-03-09 18:51:08,902 | INFO     | PID=651062 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-09 11:51:25] 2026-03-09 18:51:08,903 | INFO     | .. there are 12 such processes running
[2026-03-09 11:51:25] 2026-03-09 18:51:08,903 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 11:51:25] 2026-03-09 18:51:08,903 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 11:51:25] 2026-03-09 18:51:08,903 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 11:51:25] 2026-03-09 18:51:18,499 | INFO     | [monitor] cgroup control has ended
[2026-03-09 11:51:25] 2026-03-09 18:51:20,528 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125205577893696)>', '<ExcThread(monitor, started 125205024315136)>']
[2026-03-09 11:51:25] 2026-03-09 18:51:20,963 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 11:51:25] 2026-03-09 18:51:20,964 | INFO     | [monitor] control thread has ended
[2026-03-09 11:51:25] 2026-03-09 18:51:25,554 | INFO     | all workflow threads have been joined
[2026-03-09 11:51:25] 2026-03-09 18:51:25,554 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 11:51:25] 2026-03-09 18:51:25,554 | INFO     | traces error code: 0
[2026-03-09 11:51:25] 2026-03-09 18:51:25,555 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 11:51:25] 2026-03-09 18:51:25,698 [wrapper] ==== pilot stdout END ====
[2026-03-09 11:51:25] 2026-03-09 18:51:25,702 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 11:51:25] 2026-03-09 18:51:25,705 [wrapper] pilotpid: 651062
[2026-03-09 11:51:25] 2026-03-09 18:51:25,709 [wrapper] Pilot exit status: 0
[2026-03-09 11:51:25] 2026-03-09 18:51:25,723 [wrapper] pandaids: 7035003754
[2026-03-09 11:51:25] 2026-03-09 18:51:25,826 [wrapper] cleanup supervisor_pilot  779544 651063
[2026-03-09 11:51:25] 2026-03-09 18:51:25,832 [wrapper] Test setup, not cleaning
[2026-03-09 11:51:25] 2026-03-09 18:51:25,836 [wrapper] apfmon messages muted
[2026-03-09 11:51:25] 2026-03-09 18:51:25,840 [wrapper] ==== wrapper stdout END ====
[2026-03-09 11:51:25] 2026-03-09 18:51:25,844 [wrapper] ==== wrapper stderr END ====
[2026-03-09 11:51:25]  *** Error codes and diagnostics ***
[2026-03-09 11:51:25]     "exeErrorCode": 0,
[2026-03-09 11:51:25]     "exeErrorDiag": "",
[2026-03-09 11:51:25]     "pilotErrorCode": 0,
[2026-03-09 11:51:25]     "pilotErrorDiag": "",
[2026-03-09 11:51:25]  *** Listing of results directory ***
[2026-03-09 11:51:25] total 332228
[2026-03-09 11:51:25] -rw-r--r-- 1 boinc boinc    584627 Mar  1 04:55 pilot3.tar.gz
[2026-03-09 11:51:25] -rw-r--r-- 1 boinc boinc      5111 Mar  1 04:55 queuedata.json
[2026-03-09 11:51:25] -rwx------ 1 boinc boinc     36322 Mar  1 04:56 runpilot2-wrapper.sh
[2026-03-09 11:51:25] -rw-r--r-- 1 boinc boinc       100 Mar  9 10:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 11:51:25] -rwxr-xr-x 1 boinc boinc      7986 Mar  9 10:25 run_atlas
[2026-03-09 11:51:25] -rw-r--r-- 1 boinc boinc       105 Mar  9 10:25 job.xml
[2026-03-09 11:51:25] -rw-r--r-- 2 boinc boinc 188527257 Mar  9 10:25 EVNT.48700904._000105.pool.root.1
[2026-03-09 11:51:25] -rw-r--r-- 2 boinc boinc    597935 Mar  9 10:25 input.tar.gz
[2026-03-09 11:51:25] -rw-r--r-- 2 boinc boinc     15845 Mar  9 10:25 start_atlas.sh
[2026-03-09 11:51:25] drwxrwx--x 2 boinc boinc      4096 Mar  9 10:25 shared
[2026-03-09 11:51:25] -rw-r--r-- 1 boinc boinc         0 Mar  9 10:25 boinc_setup_complete
[2026-03-09 11:51:25] -rw-r--r-- 1 boinc boinc      9894 Mar  9 10:25 init_data.xml
[2026-03-09 11:51:25] -rw-r--r-- 1 boinc boinc         0 Mar  9 10:25 boinc_lockfile
[2026-03-09 11:51:25] -rw-r--r-- 1 boinc boinc      2519 Mar  9 10:25 pandaJob.out
[2026-03-09 11:51:25] -rw------- 1 boinc boinc   1002716 Mar  9 10:26 agis_schedconf.cvmfs.json
[2026-03-09 11:51:25] -rw------- 1 boinc boinc   1511578 Mar  9 10:26 agis_ddmendpoints.agis.ALL.json
[2026-03-09 11:51:25] -rw------- 1 boinc boinc       417 Mar  9 10:26 workernode_map.json
[2026-03-09 11:51:25] drwx------ 5 boinc boinc      4096 Mar  9 10:26 pilot3
[2026-03-09 11:51:25] -rw------- 1 boinc boinc 145614910 Mar  9 11:50 HITS.48700906._002388.pool.root.1
[2026-03-09 11:51:25] -rw------- 1 boinc boinc        95 Mar  9 11:50 pilot_heartbeat.json
[2026-03-09 11:51:25] -rw-r--r-- 1 boinc boinc       530 Mar  9 11:50 boinc_task_state.xml
[2026-03-09 11:51:25] -rw------- 1 boinc boinc      1023 Mar  9 11:50 memory_monitor_summary.json
[2026-03-09 11:51:25] -rw------- 1 boinc boinc    330233 Mar  9 11:50 log.48700906._002388.job.log.tgz.1
[2026-03-09 11:51:25] -rw------- 1 boinc boinc      6265 Mar  9 11:50 heartbeat.json
[2026-03-09 11:51:25] -rw-r--r-- 1 boinc boinc      8192 Mar  9 11:51 boinc_mmap_file
[2026-03-09 11:51:25] -rw-r--r-- 1 boinc boinc        27 Mar  9 11:51 wrapper_checkpoint.txt
[2026-03-09 11:51:25] -rw------- 1 boinc boinc      4828 Mar  9 11:51 pilotlog.txt
[2026-03-09 11:51:25] -rw------- 1 boinc boinc    730479 Mar  9 11:51 log.48700906._002388.job.log.1
[2026-03-09 11:51:25] -rw------- 1 boinc boinc       357 Mar  9 11:51 output.list
[2026-03-09 11:51:25] -rw-r--r-- 1 boinc boinc       620 Mar  9 11:51 runtime_log
[2026-03-09 11:51:25] -rw------- 1 boinc boinc   1075200 Mar  9 11:51 result.tar.gz
[2026-03-09 11:51:25] -rw------- 1 boinc boinc       648 Mar  9 11:51 VQ9NDmRWvG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmzGALDmQhfpTm.diag
[2026-03-09 11:51:25] -rw-r--r-- 1 boinc boinc      8913 Mar  9 11:51 runtime_log.err
[2026-03-09 11:51:25] -rw-r--r-- 1 boinc boinc     21400 Mar  9 11:51 stderr.txt
[2026-03-09 11:51:25] HITS file was successfully produced:
[2026-03-09 11:51:25] -rw------- 1 boinc boinc 145614910 Mar  9 11:50 shared/HITS.pool.root.1
[2026-03-09 11:51:25]  *** Contents of shared directory: ***
[2026-03-09 11:51:25] total 327976
[2026-03-09 11:51:25] -rw-r--r-- 2 boinc boinc 188527257 Mar  9 10:25 ATLAS.root_0
[2026-03-09 11:51:25] -rw-r--r-- 2 boinc boinc    597935 Mar  9 10:25 input.tar.gz
[2026-03-09 11:51:25] -rw-r--r-- 2 boinc boinc     15845 Mar  9 10:25 start_atlas.sh
[2026-03-09 11:51:25] -rw------- 1 boinc boinc 145614910 Mar  9 11:50 HITS.pool.root.1
[2026-03-09 11:51:25] -rw------- 1 boinc boinc   1075200 Mar  9 11:51 result.tar.gz
11:51:27 (646848): run_atlas exited; CPU time 36572.222050
11:51:27 (646848): called boinc_finish(0)

</stderr_txt>
]]>

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