Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:10:19 (931310): wrapper (7.7.26015): starting
19:10:19 (931310): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 19:10:19] Arguments: --nthreads 4
[2026-03-09 19:10:19] Threads: 4
[2026-03-09 19:10:19] Checking for CVMFS
[2026-03-09 19:10:19] No cvmfs_config command found, will try listing directly
[2026-03-09 19:10:19] CVMFS is ok
[2026-03-09 19:10:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 19:10:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 19:10:19] Further information can be found at the LHC@home message board.
[2026-03-09 19:10:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 19:10:19] Checking for apptainer binary...
[2026-03-09 19:10:19] which: no apptainer in ((null))
[2026-03-09 19:10:19] apptainer is not installed, using version from CVMFS
[2026-03-09 19:10:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 19:10:19] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot24/slots/5/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2026-03-09 19:10:19] apptainer works
[2026-03-09 19:10:19] Set ATHENA_PROC_NUMBER=4
[2026-03-09 19:10:19] Set ATHENA_CORE_NUMBER=4
[2026-03-09 19:10:19] Starting ATLAS job with PandaID=7047150377
[2026-03-09 19:10:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot24/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 21:13:43]  *** The last 200 lines of the pilot log: ***
[2026-03-09 21:13:43] 2026-03-09 20:12:52,101 | INFO     | job 7047150377 has finished - writing final server update
[2026-03-09 21:13:43] 2026-03-09 20:12:52,102 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2969739/.job.ad'
[2026-03-09 21:13:43] 2026-03-09 20:12:52,102 | INFO     | total number of processed events: 400 (read)
[2026-03-09 21:13:43] 2026-03-09 20:12:52,119 | INFO     | using path: /var/lib/boinc/var/slot24/slots/5/PanDA_Pilot-7047150377/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 21:13:43] 2026-03-09 20:12:52,120 | INFO     | extracted standard info from prmon json
[2026-03-09 21:13:43] 2026-03-09 20:12:52,120 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 21:13:43] 2026-03-09 20:12:52,120 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 21:13:43] 2026-03-09 20:12:52,120 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 21:13:43] 2026-03-09 20:12:52,120 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 21:13:43] 2026-03-09 20:12:52,121 | INFO     | fitting pss+swap vs Time
[2026-03-09 21:13:43] 2026-03-09 20:12:52,122 | INFO     | sum of square deviations: 549294020.0
[2026-03-09 21:13:43] 2026-03-09 20:12:52,122 | INFO     | sum of deviations: 4381524897.0
[2026-03-09 21:13:43] 2026-03-09 20:12:52,122 | INFO     | mean x: 1773083502.0
[2026-03-09 21:13:43] 2026-03-09 20:12:52,122 | INFO     | mean y: 2320151.52892562
[2026-03-09 21:13:43] 2026-03-09 20:12:52,122 | INFO     | intersect: -14140942337.425442
[2026-03-09 21:13:43] 2026-03-09 20:12:52,122 | INFO     | chi2: 1.855256768259063
[2026-03-09 21:13:43] 2026-03-09 20:12:52,122 | INFO     | sum of square deviations: 483971865.0
[2026-03-09 21:13:43] 2026-03-09 20:12:52,122 | INFO     | sum of deviations: 11708463647.0
[2026-03-09 21:13:43] 2026-03-09 20:12:52,122 | INFO     | mean x: 1773083349.5
[2026-03-09 21:13:43] 2026-03-09 20:12:52,122 | INFO     | mean y: 2336651.896551724
[2026-03-09 21:13:43] 2026-03-09 20:12:52,123 | INFO     | intersect: -42892888137.0935
[2026-03-09 21:13:43] 2026-03-09 20:12:52,123 | INFO     | chi2: 1.029486279631777
[2026-03-09 21:13:43] 2026-03-09 20:12:52,123 | INFO     | current chi2=1.029486279631777 (change=44.50976828410512 %)
[2026-03-09 21:13:43] 2026-03-09 20:12:52,123 | INFO     | sum of square deviations: 424045160.0
[2026-03-09 21:13:43] 2026-03-09 20:12:52,123 | INFO     | sum of deviations: 11140197163.0
[2026-03-09 21:13:43] 2026-03-09 20:12:52,123 | INFO     | mean x: 1773083197.0
[2026-03-09 21:13:43] 2026-03-09 20:12:52,123 | INFO     | mean y: 2335204.873873874
[2026-03-09 21:13:43] 2026-03-09 20:12:52,123 | INFO     | intersect: -46578779884.3359
[2026-03-09 21:13:43] 2026-03-09 20:12:52,123 | INFO     | chi2: 1.0307475186321744
[2026-03-09 21:13:43] 2026-03-09 20:12:52,123 | INFO     | current chi2=1.0307475186321744 (change=-0.1225114919305719 %)
[2026-03-09 21:13:43] 2026-03-09 20:12:52,123 | INFO     | right removable region: 110
[2026-03-09 21:13:43] 2026-03-09 20:12:52,123 | INFO     | sum of square deviations: 483971865.0
[2026-03-09 21:13:43] 2026-03-09 20:12:52,124 | INFO     | sum of deviations: -5765683552.5
[2026-03-09 21:13:43] 2026-03-09 20:12:52,124 | INFO     | mean x: 1773083654.5
[2026-03-09 21:13:43] 2026-03-09 20:12:52,124 | INFO     | mean y: 2343154.974137931
[2026-03-09 21:13:43] 2026-03-09 20:12:52,124 | INFO     | intersect: 21125553000.978806
[2026-03-09 21:13:43] 2026-03-09 20:12:52,124 | INFO     | chi2: 0.8534600767842686
[2026-03-09 21:13:43] 2026-03-09 20:12:52,124 | INFO     | current chi2=0.8534600767842686 (change=53.99773813599187 %)
[2026-03-09 21:13:43] 2026-03-09 20:12:52,124 | INFO     | sum of square deviations: 424045160.0
[2026-03-09 21:13:43] 2026-03-09 20:12:52,124 | INFO     | sum of deviations: -5922468772.0
[2026-03-09 21:13:43] 2026-03-09 20:12:52,124 | INFO     | mean x: 1773083807.0
[2026-03-09 21:13:43] 2026-03-09 20:12:52,124 | INFO     | mean y: 2343545.945945946
[2026-03-09 21:13:43] 2026-03-09 20:12:52,124 | INFO     | intersect: 24766294340.942345
[2026-03-09 21:13:43] 2026-03-09 20:12:52,124 | INFO     | chi2: 0.8540954844813626
[2026-03-09 21:13:43] 2026-03-09 20:12:52,124 | INFO     | current chi2=0.8540954844813626 (change=-0.07445078151612704 %)
[2026-03-09 21:13:43] 2026-03-09 20:12:52,124 | INFO     | left removable region: 20
[2026-03-09 21:13:43] 2026-03-09 20:12:52,125 | INFO     | sum of square deviations: 226022842.5
[2026-03-09 21:13:43] 2026-03-09 20:12:52,125 | INFO     | sum of deviations: 627237014.0000001
[2026-03-09 21:13:43] 2026-03-09 20:12:52,125 | INFO     | mean x: 1773083776.5
[2026-03-09 21:13:43] 2026-03-09 20:12:52,125 | INFO     | mean y: 2364039.9555555554
[2026-03-09 21:13:43] 2026-03-09 20:12:52,125 | INFO     | intersect: -4918128779.453631
[2026-03-09 21:13:43] 2026-03-09 20:12:52,125 | INFO     | chi2: 7.195142464727983e-05
[2026-03-09 21:13:43] 2026-03-09 20:12:52,125 | INFO     | current memory leak: 2.78 B/s (using 90 data points, chi2=0.00)
[2026-03-09 21:13:43] 2026-03-09 20:12:52,125 | INFO     | could have reported an average CPU frequency of 3682 MHz (8 samples)
[2026-03-09 21:13:43] 2026-03-09 20:12:52,125 | INFO     | ..............................
[2026-03-09 21:13:43] 2026-03-09 20:12:52,125 | INFO     | . Timing measurements:
[2026-03-09 21:13:43] 2026-03-09 20:12:52,125 | INFO     | . get job = 0 s
[2026-03-09 21:13:43] 2026-03-09 20:12:52,125 | INFO     | . initial setup = 3 s
[2026-03-09 21:13:43] 2026-03-09 20:12:52,125 | INFO     | . payload setup = 2 s
[2026-03-09 21:13:43] 2026-03-09 20:12:52,125 | INFO     | . stage-in = 0 s
[2026-03-09 21:13:43] 2026-03-09 20:12:52,126 | INFO     | . payload execution = 7324 s
[2026-03-09 21:13:43] 2026-03-09 20:12:52,126 | INFO     | . stage-out = 0 s
[2026-03-09 21:13:43] 2026-03-09 20:12:52,126 | INFO     | . log creation = 0 s
[2026-03-09 21:13:43] 2026-03-09 20:12:52,126 | INFO     | ..............................
[2026-03-09 21:13:43] 2026-03-09 20:12:52,440 | INFO     | 
[2026-03-09 21:13:43] 2026-03-09 20:12:52,440 | INFO     | job summary report
[2026-03-09 21:13:43] 2026-03-09 20:12:52,440 | INFO     | --------------------------------------------------
[2026-03-09 21:13:43] 2026-03-09 20:12:52,440 | INFO     | PanDA job id: 7047150377
[2026-03-09 21:13:43] 2026-03-09 20:12:52,440 | INFO     | task id: 48998032
[2026-03-09 21:13:43] 2026-03-09 20:12:52,440 | INFO     | errors: (none)
[2026-03-09 21:13:43] 2026-03-09 20:12:52,440 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 21:13:43] 2026-03-09 20:12:52,440 | INFO     | pilot state: finished 
[2026-03-09 21:13:43] 2026-03-09 20:12:52,440 | INFO     | transexitcode: 0
[2026-03-09 21:13:43] 2026-03-09 20:12:52,440 | INFO     | exeerrorcode: 0
[2026-03-09 21:13:43] 2026-03-09 20:12:52,440 | INFO     | exeerrordiag: 
[2026-03-09 21:13:43] 2026-03-09 20:12:52,440 | INFO     | exitcode: 0
[2026-03-09 21:13:43] 2026-03-09 20:12:52,440 | INFO     | exitmsg: OK
[2026-03-09 21:13:43] 2026-03-09 20:12:52,440 | INFO     | cpuconsumptiontime: 28557 s
[2026-03-09 21:13:43] 2026-03-09 20:12:52,440 | INFO     | nevents: 400
[2026-03-09 21:13:43] 2026-03-09 20:12:52,440 | INFO     | neventsw: 0
[2026-03-09 21:13:43] 2026-03-09 20:12:52,441 | INFO     | pid: 941497
[2026-03-09 21:13:43] 2026-03-09 20:12:52,441 | INFO     | pgrp: 941497
[2026-03-09 21:13:43] 2026-03-09 20:12:52,441 | INFO     | corecount: 4
[2026-03-09 21:13:43] 2026-03-09 20:12:52,441 | INFO     | event service: False
[2026-03-09 21:13:43] 2026-03-09 20:12:52,441 | INFO     | sizes: {0: 2280236, 11: 2280236, 7331: 2316659, 7333: 2316659, 7335: 2316853}
[2026-03-09 21:13:43] 2026-03-09 20:12:52,441 | INFO     | --------------------------------------------------
[2026-03-09 21:13:43] 2026-03-09 20:12:52,441 | INFO     | 
[2026-03-09 21:13:43] 2026-03-09 20:12:52,441 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot24/slots/5
[2026-03-09 21:13:43] 2026-03-09 20:12:52,455 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 21:13:43] 2026-03-09 20:12:52,456 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 21:13:43] 2026-03-09 20:12:52,456 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 21:13:43] 2026-03-09 20:12:52,456 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 21:13:43] 2026-03-09 20:12:52,456 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 21:13:43] 2026-03-09 20:12:52,456 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 21:13:43] 2026-03-09 20:12:52,456 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 21:13:43] 2026-03-09 20:12:52,456 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 21:13:43] 2026-03-09 20:12:52,456 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 21:13:43] 2026-03-09 20:12:52,456 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 21:13:43] 2026-03-09 20:12:52,456 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 21:13:43] 2026-03-09 20:12:52,456 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 21:13:43] 2026-03-09 20:12:52,456 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 21:13:43] 2026-03-09 20:12:52,456 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 21:13:43] 2026-03-09 20:12:52,456 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 21:13:43] 2026-03-09 20:12:52,456 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 21:13:43] 2026-03-09 20:12:52,456 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 21:13:43] 2026-03-09 20:12:52,456 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 21:13:43] 2026-03-09 20:12:52,456 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 21:13:43] 2026-03-09 20:12:52,456 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 21:13:43] 2026-03-09 20:12:52,456 | INFO     | job 7047150377 has completed (purged errors)
[2026-03-09 21:13:43] 2026-03-09 20:12:52,456 | INFO     | overall cleanup function is called
[2026-03-09 21:13:43] 2026-03-09 20:12:53,463 | INFO     | --- collectZombieJob: --- 10, [941497]
[2026-03-09 21:13:43] 2026-03-09 20:12:53,463 | INFO     | zombie collector waiting for pid 941497
[2026-03-09 21:13:43] 2026-03-09 20:12:53,463 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 21:13:43] 2026-03-09 20:12:53,463 | INFO     | collected zombie processes
[2026-03-09 21:13:43] 2026-03-09 20:12:53,463 | INFO     | will attempt to kill all subprocesses of pid=941497
[2026-03-09 21:13:43] 2026-03-09 20:12:53,861 | INFO     | process IDs to be killed: [941497] (in reverse order)
[2026-03-09 21:13:43] 2026-03-09 20:12:54,054 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 21:13:43] 2026-03-09 20:12:54,055 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 21:13:43] 2026-03-09 20:12:54,079 | INFO     | did not find any defunct processes belonging to 941497
[2026-03-09 21:13:43] 2026-03-09 20:12:54,099 | INFO     | did not find any defunct processes belonging to 941497
[2026-03-09 21:13:43] 2026-03-09 20:12:54,100 | INFO     | ready for new job
[2026-03-09 21:13:43] 2026-03-09 20:12:54,100 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 21:13:43] 2026-03-09 20:12:54,101 | INFO     | **************************************
[2026-03-09 21:13:43] 2026-03-09 20:12:54,104 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 21:13:43] 2026-03-09 20:12:54,104 | INFO     | **************************************
[2026-03-09 21:13:43] 2026-03-09 20:12:54,104 | INFO     | 
[2026-03-09 21:13:43] 2026-03-09 20:12:54,111 | INFO     | architecture information:
[2026-03-09 21:13:43] 2026-03-09 20:12:54,111 | INFO     | executing command: cat /etc/os-release
[2026-03-09 21:13:43] 2026-03-09 20:12:54,124 | INFO     | cat /etc/os-release:
[2026-03-09 21:13:43] NAME="CentOS Linux"
[2026-03-09 21:13:43] VERSION="7 (Core)"
[2026-03-09 21:13:43] ID="centos"
[2026-03-09 21:13:43] ID_LIKE="rhel fedora"
[2026-03-09 21:13:43] VERSION_ID="7"
[2026-03-09 21:13:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 21:13:43] ANSI_COLOR="0;31"
[2026-03-09 21:13:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 21:13:43] HOME_URL="https://www.centos.org/"
[2026-03-09 21:13:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 21:13:43] 
[2026-03-09 21:13:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 21:13:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 21:13:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 21:13:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 21:13:43] 
[2026-03-09 21:13:43] 2026-03-09 20:12:54,125 | INFO     | **************************************
[2026-03-09 21:13:43] 2026-03-09 20:12:54,628 | INFO     | executing command: df -mP /var/lib/boinc/var/slot24/slots/5
[2026-03-09 21:13:43] 2026-03-09 20:12:54,644 | INFO     | sufficient remaining disk space (20514340864 B)
[2026-03-09 21:13:43] 2026-03-09 20:12:54,644 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 21:13:43] 2026-03-09 20:12:54,644 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 21:13:43] 2026-03-09 20:12:54,644 | INFO     | update_server=False
[2026-03-09 21:13:43] 2026-03-09 20:12:54,644 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 21:13:43] 2026-03-09 20:12:54,644 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 21:13:43] 2026-03-09 20:12:54,645 | INFO     | aborting loop
[2026-03-09 21:13:43] 2026-03-09 20:12:54,645 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 21:13:43] 2026-03-09 20:12:54,684 | INFO     | all data control threads have been joined
[2026-03-09 21:13:43] 2026-03-09 20:12:54,859 | INFO     | job.realtimelogging is not enabled
[2026-03-09 21:13:43] 2026-03-09 20:12:55,283 | INFO     | all payload control threads have been joined
[2026-03-09 21:13:43] 2026-03-09 20:12:55,381 | INFO     | all job control threads have been joined
[2026-03-09 21:13:43] 2026-03-09 20:12:55,646 | INFO     | [job] retrieve thread has finished
[2026-03-09 21:13:43] 2026-03-09 20:12:55,650 | INFO     | [job] job monitor thread has finished
[2026-03-09 21:13:43] 2026-03-09 20:12:55,689 | INFO     | [data] control thread has finished
[2026-03-09 21:13:43] 2026-03-09 20:12:55,864 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 21:13:43] 2026-03-09 20:12:56,103 | INFO     | [payload] failed_post thread has finished
[2026-03-09 21:13:43] 2026-03-09 20:12:56,288 | INFO     | [payload] control thread has finished
[2026-03-09 21:13:43] 2026-03-09 20:12:56,327 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 21:13:43] 2026-03-09 20:12:56,387 | INFO     | [job] control thread has finished
[2026-03-09 21:13:43] 2026-03-09 20:12:56,454 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 21:13:43] 2026-03-09 20:12:56,562 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 21:13:43] 2026-03-09 20:12:56,562 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 21:13:43] 2026-03-09 20:12:56,616 | INFO     | [job] validate thread has finished
[2026-03-09 21:13:43] 2026-03-09 20:12:56,651 | INFO     | [data] copytool_out thread has finished
[2026-03-09 21:13:43] 2026-03-09 20:12:56,765 | INFO     | [data] copytool_in thread has finished
[2026-03-09 21:13:43] 2026-03-09 20:12:57,071 | INFO     | [payload] validate_post thread has finished
[2026-03-09 21:13:43] 2026-03-09 20:12:57,186 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 21:13:43] 2026-03-09 20:12:58,191 | INFO     | [job] queue monitor thread has finished
[2026-03-09 21:13:43] 2026-03-09 20:13:00,332 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 21:13:43] 2026-03-09 20:13:25,344 | INFO     | PID=935822 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-09 21:13:43] 2026-03-09 20:13:25,345 | INFO     | .. there are 56 such processes running
[2026-03-09 21:13:43] 2026-03-09 20:13:25,345 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 21:13:43] 2026-03-09 20:13:25,345 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 21:13:43] 2026-03-09 20:13:25,345 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 21:13:43] 2026-03-09 20:13:37,722 | INFO     | [monitor] cgroup control has ended
[2026-03-09 21:13:43] 2026-03-09 20:13:38,537 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23124649592640)>', '<ExcThread(monitor, started 23124411430656)>']
[2026-03-09 21:13:43] 2026-03-09 20:13:39,407 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 21:13:43] 2026-03-09 20:13:39,407 | INFO     | [monitor] control thread has ended
[2026-03-09 21:13:43] 2026-03-09 20:13:43,562 | INFO     | all workflow threads have been joined
[2026-03-09 21:13:43] 2026-03-09 20:13:43,562 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 21:13:43] 2026-03-09 20:13:43,562 | INFO     | traces error code: 0
[2026-03-09 21:13:43] 2026-03-09 20:13:43,562 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 21:13:43] 2026-03-09 20:13:43,702 [wrapper] ==== pilot stdout END ====
[2026-03-09 21:13:43] 2026-03-09 20:13:43,705 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 21:13:43] 2026-03-09 20:13:43,707 [wrapper] pilotpid: 935822
[2026-03-09 21:13:43] 2026-03-09 20:13:43,710 [wrapper] Pilot exit status: 0
[2026-03-09 21:13:43] 2026-03-09 20:13:43,719 [wrapper] pandaids: 7047150377
[2026-03-09 21:13:43] 2026-03-09 20:13:43,828 [wrapper] cleanup supervisor_pilot 2384483 935823
[2026-03-09 21:13:43] 2026-03-09 20:13:43,831 [wrapper] Test setup, not cleaning
[2026-03-09 21:13:43] 2026-03-09 20:13:43,834 [wrapper] apfmon messages muted
[2026-03-09 21:13:43] 2026-03-09 20:13:43,835 [wrapper] ==== wrapper stdout END ====
[2026-03-09 21:13:43] 2026-03-09 20:13:43,836 [wrapper] ==== wrapper stderr END ====
[2026-03-09 21:13:43]  *** Error codes and diagnostics ***
[2026-03-09 21:13:43]     "exeErrorCode": 0,
[2026-03-09 21:13:43]     "exeErrorDiag": "",
[2026-03-09 21:13:43]     "pilotErrorCode": 0,
[2026-03-09 21:13:43]     "pilotErrorDiag": "",
[2026-03-09 21:13:43]  *** Listing of results directory ***
[2026-03-09 21:13:43] total 643136
[2026-03-09 21:13:43] -rw-r--r--. 1 boinc boinc    584627 Mar  9 11:57 pilot3.tar.gz
[2026-03-09 21:13:43] -rwx------. 1 boinc boinc     36322 Mar  9 11:59 runpilot2-wrapper.sh
[2026-03-09 21:13:43] -rw-r--r--. 1 boinc boinc      5111 Mar  9 12:01 queuedata.json
[2026-03-09 21:13:43] -rw-r--r--. 1 boinc boinc       100 Mar  9 19:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 21:13:43] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 19:10 run_atlas
[2026-03-09 21:13:43] -rw-r--r--. 1 boinc boinc       105 Mar  9 19:10 job.xml
[2026-03-09 21:13:43] -rw-r--r--. 2 boinc boinc    597942 Mar  9 19:10 input.tar.gz
[2026-03-09 21:13:43] -rw-r--r--. 1 boinc boinc      6701 Mar  9 19:10 init_data.xml
[2026-03-09 21:13:43] -rw-r--r--. 2 boinc boinc 358879179 Mar  9 19:10 EVNT.48998030._000007.pool.root.1
[2026-03-09 21:13:43] -rw-r--r--. 2 boinc boinc     15845 Mar  9 19:10 start_atlas.sh
[2026-03-09 21:13:43] drwxrwx--x. 2 boinc boinc      4096 Mar  9 19:10 shared
[2026-03-09 21:13:43] -rw-r--r--. 1 boinc boinc         0 Mar  9 19:10 boinc_lockfile
[2026-03-09 21:13:43] -rw-r--r--. 1 boinc boinc      2557 Mar  9 19:10 pandaJob.out
[2026-03-09 21:13:43] -rw-------. 1 boinc boinc   1002716 Mar  9 19:10 agis_schedconf.cvmfs.json
[2026-03-09 21:13:43] -rw-------. 1 boinc boinc   1511578 Mar  9 19:10 agis_ddmendpoints.agis.ALL.json
[2026-03-09 21:13:43] -rw-------. 1 boinc boinc       444 Mar  9 19:10 workernode_map.json
[2026-03-09 21:13:43] drwx------. 5 boinc boinc      4096 Mar  9 19:10 pilot3
[2026-03-09 21:13:43] -rw-------. 1 boinc boinc 293052744 Mar  9 21:12 HITS.48998032._000153.pool.root.1
[2026-03-09 21:13:43] -rw-r--r--. 1 boinc boinc       530 Mar  9 21:12 boinc_task_state.xml
[2026-03-09 21:13:43] -rw-------. 1 boinc boinc      1033 Mar  9 21:12 memory_monitor_summary.json
[2026-03-09 21:13:43] -rw-------. 1 boinc boinc    292961 Mar  9 21:12 log.48998032._000153.job.log.tgz.1
[2026-03-09 21:13:43] -rw-------. 1 boinc boinc      6345 Mar  9 21:12 heartbeat.json
[2026-03-09 21:13:43] -rw-r--r--. 1 boinc boinc        27 Mar  9 21:13 wrapper_checkpoint.txt
[2026-03-09 21:13:43] -rw-r--r--. 1 boinc boinc      8192 Mar  9 21:13 boinc_mmap_file
[2026-03-09 21:13:43] -rw-------. 1 boinc boinc        95 Mar  9 21:13 pilot_heartbeat.json
[2026-03-09 21:13:43] -rw-------. 1 boinc boinc      4900 Mar  9 21:13 pilotlog.txt
[2026-03-09 21:13:43] -rw-------. 1 boinc boinc   1060434 Mar  9 21:13 log.48998032._000153.job.log.1
[2026-03-09 21:13:43] -rw-------. 1 boinc boinc       357 Mar  9 21:13 output.list
[2026-03-09 21:13:43] -rw-r--r--. 1 boinc boinc       620 Mar  9 21:13 runtime_log
[2026-03-09 21:13:43] -rw-------. 1 boinc boinc   1372160 Mar  9 21:13 result.tar.gz
[2026-03-09 21:13:43] -rw-r--r--. 1 boinc boinc      9204 Mar  9 21:13 runtime_log.err
[2026-03-09 21:13:43] -rw-------. 1 boinc boinc       662 Mar  9 21:13 MpPODmdVnJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDm9bZLDmdbXwKo.diag
[2026-03-09 21:13:43] -rw-r--r--. 1 boinc boinc     20824 Mar  9 21:13 stderr.txt
[2026-03-09 21:13:43] HITS file was successfully produced:
[2026-03-09 21:13:43] -rw-------. 1 boinc boinc 293052744 Mar  9 21:12 shared/HITS.pool.root.1
[2026-03-09 21:13:43]  *** Contents of shared directory: ***
[2026-03-09 21:13:43] total 638604
[2026-03-09 21:13:43] -rw-r--r--. 2 boinc boinc    597942 Mar  9 19:10 input.tar.gz
[2026-03-09 21:13:43] -rw-r--r--. 2 boinc boinc 358879179 Mar  9 19:10 ATLAS.root_0
[2026-03-09 21:13:43] -rw-r--r--. 2 boinc boinc     15845 Mar  9 19:10 start_atlas.sh
[2026-03-09 21:13:43] -rw-------. 1 boinc boinc 293052744 Mar  9 21:12 HITS.pool.root.1
[2026-03-09 21:13:43] -rw-------. 1 boinc boinc   1372160 Mar  9 21:13 result.tar.gz
21:13:45 (931310): run_atlas exited; CPU time 28854.067087
21:13:45 (931310): called boinc_finish(0)

</stderr_txt>
]]>

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