Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:04:56 (160826): wrapper (7.7.26015): starting
19:04:56 (160826): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 19:04:56] Arguments: --nthreads 4
[2026-03-09 19:04:56] Threads: 4
[2026-03-09 19:04:56] Checking for CVMFS
[2026-03-09 19:04:56] No cvmfs_config command found, will try listing directly
[2026-03-09 19:04:56] CVMFS is ok
[2026-03-09 19:04:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 19:04:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 19:04:56] Further information can be found at the LHC@home message board.
[2026-03-09 19:04:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 19:04:56] Checking for apptainer binary...
[2026-03-09 19:04:56] which: no apptainer in ((null))
[2026-03-09 19:04:56] apptainer is not installed, using version from CVMFS
[2026-03-09 19:04:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 19:04:56] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot16/slots/5/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-09 19:04:56] apptainer works
[2026-03-09 19:04:56] Set ATHENA_PROC_NUMBER=4
[2026-03-09 19:04:56] Set ATHENA_CORE_NUMBER=4
[2026-03-09 19:04:56] Starting ATLAS job with PandaID=7047419959
[2026-03-09 19:04:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot16/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 20:47:22]  *** The last 200 lines of the pilot log: ***
[2026-03-09 20:47:22] 2026-03-09 19:46:24,696 | INFO     | job 7047419959 has finished - writing final server update
[2026-03-09 20:47:22] 2026-03-09 19:46:24,696 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3386372/.job.ad'
[2026-03-09 20:47:22] 2026-03-09 19:46:24,696 | INFO     | total number of processed events: 400 (read)
[2026-03-09 20:47:22] 2026-03-09 19:46:24,713 | INFO     | using path: /var/lib/boinc/var/slot16/slots/5/PanDA_Pilot-7047419959/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 20:47:22] 2026-03-09 19:46:24,714 | INFO     | extracted standard info from prmon json
[2026-03-09 20:47:22] 2026-03-09 19:46:24,714 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 20:47:22] 2026-03-09 19:46:24,714 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 20:47:22] 2026-03-09 19:46:24,714 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 20:47:22] 2026-03-09 19:46:24,714 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 20:47:22] 2026-03-09 19:46:24,715 | INFO     | fitting pss+swap vs Time
[2026-03-09 20:47:22] 2026-03-09 19:46:24,716 | INFO     | sum of square deviations: 310052325.0
[2026-03-09 20:47:22] 2026-03-09 19:46:24,716 | INFO     | sum of deviations: 4028976800.000001
[2026-03-09 20:47:22] 2026-03-09 19:46:24,716 | INFO     | mean x: 1773082546.5
[2026-03-09 20:47:22] 2026-03-09 19:46:24,716 | INFO     | mean y: 2298025.96
[2026-03-09 20:47:22] 2026-03-09 19:46:24,716 | INFO     | intersect: -23038033777.17492
[2026-03-09 20:47:22] 2026-03-09 19:46:24,716 | INFO     | chi2: 1.942447440921426
[2026-03-09 20:47:22] 2026-03-09 19:46:24,716 | INFO     | sum of square deviations: 265828240.0
[2026-03-09 20:47:22] 2026-03-09 19:46:24,716 | INFO     | sum of deviations: 9911259626.0
[2026-03-09 20:47:22] 2026-03-09 19:46:24,716 | INFO     | mean x: 1773082394.0
[2026-03-09 20:47:22] 2026-03-09 19:46:24,717 | INFO     | mean y: 2317425.694736842
[2026-03-09 20:47:22] 2026-03-09 19:46:24,717 | INFO     | intersect: -66106083793.16607
[2026-03-09 20:47:22] 2026-03-09 19:46:24,717 | INFO     | chi2: 1.1241770321408973
[2026-03-09 20:47:22] 2026-03-09 19:46:24,717 | INFO     | current chi2=1.1241770321408973 (change=42.12574258340659 %)
[2026-03-09 20:47:22] 2026-03-09 19:46:24,717 | INFO     | sum of square deviations: 226022842.5
[2026-03-09 20:47:22] 2026-03-09 19:46:24,717 | INFO     | sum of deviations: 9330323472.5
[2026-03-09 20:47:22] 2026-03-09 19:46:24,717 | INFO     | mean x: 1773082241.5
[2026-03-09 20:47:22] 2026-03-09 19:46:24,717 | INFO     | mean y: 2315197.9444444445
[2026-03-09 20:47:22] 2026-03-09 19:46:24,717 | INFO     | intersect: -73191308391.40742
[2026-03-09 20:47:22] 2026-03-09 19:46:24,717 | INFO     | chi2: 1.126410885848454
[2026-03-09 20:47:22] 2026-03-09 19:46:24,717 | INFO     | current chi2=1.126410885848454 (change=-0.19871013583177546 %)
[2026-03-09 20:47:22] 2026-03-09 19:46:24,717 | INFO     | right removable region: 89
[2026-03-09 20:47:22] 2026-03-09 19:46:24,717 | INFO     | sum of square deviations: 265828240.0
[2026-03-09 20:47:22] 2026-03-09 19:46:24,718 | INFO     | sum of deviations: -5400401492.0
[2026-03-09 20:47:22] 2026-03-09 19:46:24,718 | INFO     | mean x: 1773082699.0
[2026-03-09 20:47:22] 2026-03-09 19:46:24,718 | INFO     | mean y: 2329455.9684210527
[2026-03-09 20:47:22] 2026-03-09 19:46:24,718 | INFO     | intersect: 36023176801.303085
[2026-03-09 20:47:22] 2026-03-09 19:46:24,718 | INFO     | chi2: 0.8539540935404255
[2026-03-09 20:47:22] 2026-03-09 19:46:24,718 | INFO     | current chi2=0.8539540935404255 (change=56.037209782348555 %)
[2026-03-09 20:47:22] 2026-03-09 19:46:24,718 | INFO     | sum of square deviations: 226022842.5
[2026-03-09 20:47:22] 2026-03-09 19:46:24,718 | INFO     | sum of deviations: -4986095714.0
[2026-03-09 20:47:22] 2026-03-09 19:46:24,718 | INFO     | mean x: 1773082851.5
[2026-03-09 20:47:22] 2026-03-09 19:46:24,718 | INFO     | mean y: 2327864.0
[2026-03-09 20:47:22] 2026-03-09 19:46:24,718 | INFO     | intersect: 39116785096.04303
[2026-03-09 20:47:22] 2026-03-09 19:46:24,718 | INFO     | chi2: 0.8553384527141018
[2026-03-09 20:47:22] 2026-03-09 19:46:24,718 | INFO     | current chi2=0.8553384527141018 (change=-0.1621116619907347 %)
[2026-03-09 20:47:22] 2026-03-09 19:46:24,718 | INFO     | left removable region: 20
[2026-03-09 20:47:22] 2026-03-09 19:46:24,718 | INFO     | sum of square deviations: 101843770.0
[2026-03-09 20:47:22] 2026-03-09 19:46:24,718 | INFO     | sum of deviations: 441843496.0
[2026-03-09 20:47:22] 2026-03-09 19:46:24,719 | INFO     | mean x: 1773082821.0
[2026-03-09 20:47:22] 2026-03-09 19:46:24,719 | INFO     | mean y: 2352061.217391304
[2026-03-09 20:47:22] 2026-03-09 19:46:24,719 | INFO     | intersect: -7690068519.130157
[2026-03-09 20:47:22] 2026-03-09 19:46:24,719 | INFO     | chi2: 8.259870573006268e-05
[2026-03-09 20:47:22] 2026-03-09 19:46:24,722 | INFO     | current memory leak: 4.34 B/s (using 69 data points, chi2=0.00)
[2026-03-09 20:47:22] 2026-03-09 19:46:24,722 | INFO     | could have reported an average CPU frequency of 3621 MHz (7 samples)
[2026-03-09 20:47:22] 2026-03-09 19:46:24,722 | INFO     | ..............................
[2026-03-09 20:47:22] 2026-03-09 19:46:24,722 | INFO     | . Timing measurements:
[2026-03-09 20:47:22] 2026-03-09 19:46:24,722 | INFO     | . get job = 0 s
[2026-03-09 20:47:22] 2026-03-09 19:46:24,722 | INFO     | . initial setup = 4 s
[2026-03-09 20:47:22] 2026-03-09 19:46:24,722 | INFO     | . payload setup = 4 s
[2026-03-09 20:47:22] 2026-03-09 19:46:24,722 | INFO     | . stage-in = 0 s
[2026-03-09 20:47:22] 2026-03-09 19:46:24,722 | INFO     | . payload execution = 6051 s
[2026-03-09 20:47:22] 2026-03-09 19:46:24,722 | INFO     | . stage-out = 0 s
[2026-03-09 20:47:22] 2026-03-09 19:46:24,722 | INFO     | . log creation = 0 s
[2026-03-09 20:47:22] 2026-03-09 19:46:24,722 | INFO     | ..............................
[2026-03-09 20:47:22] 2026-03-09 19:46:24,768 | INFO     | 
[2026-03-09 20:47:22] 2026-03-09 19:46:24,769 | INFO     | job summary report
[2026-03-09 20:47:22] 2026-03-09 19:46:24,769 | INFO     | --------------------------------------------------
[2026-03-09 20:47:22] 2026-03-09 19:46:24,769 | INFO     | PanDA job id: 7047419959
[2026-03-09 20:47:22] 2026-03-09 19:46:24,769 | INFO     | task id: 48998022
[2026-03-09 20:47:22] 2026-03-09 19:46:24,769 | INFO     | errors: (none)
[2026-03-09 20:47:22] 2026-03-09 19:46:24,769 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 20:47:22] 2026-03-09 19:46:24,769 | INFO     | pilot state: finished 
[2026-03-09 20:47:22] 2026-03-09 19:46:24,769 | INFO     | transexitcode: 0
[2026-03-09 20:47:22] 2026-03-09 19:46:24,769 | INFO     | exeerrorcode: 0
[2026-03-09 20:47:22] 2026-03-09 19:46:24,769 | INFO     | exeerrordiag: 
[2026-03-09 20:47:22] 2026-03-09 19:46:24,769 | INFO     | exitcode: 0
[2026-03-09 20:47:22] 2026-03-09 19:46:24,769 | INFO     | exitmsg: OK
[2026-03-09 20:47:22] 2026-03-09 19:46:24,769 | INFO     | cpuconsumptiontime: 23360 s
[2026-03-09 20:47:22] 2026-03-09 19:46:24,769 | INFO     | nevents: 400
[2026-03-09 20:47:22] 2026-03-09 19:46:24,769 | INFO     | neventsw: 0
[2026-03-09 20:47:22] 2026-03-09 19:46:24,769 | INFO     | pid: 171714
[2026-03-09 20:47:22] 2026-03-09 19:46:24,769 | INFO     | pgrp: 171714
[2026-03-09 20:47:22] 2026-03-09 19:46:24,769 | INFO     | corecount: 4
[2026-03-09 20:47:22] 2026-03-09 19:46:24,769 | INFO     | event service: False
[2026-03-09 20:47:22] 2026-03-09 19:46:24,769 | INFO     | sizes: {0: 2279143, 1: 2280272, 11: 2280272, 6060: 2307079, 6062: 2316099, 6064: 2316155, 6066: 2316477}
[2026-03-09 20:47:22] 2026-03-09 19:46:24,769 | INFO     | --------------------------------------------------
[2026-03-09 20:47:22] 2026-03-09 19:46:24,769 | INFO     | 
[2026-03-09 20:47:22] 2026-03-09 19:46:24,769 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot16/slots/5
[2026-03-09 20:47:22] 2026-03-09 19:46:24,783 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 20:47:22] 2026-03-09 19:46:24,784 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 20:47:22] 2026-03-09 19:46:24,784 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 20:47:22] 2026-03-09 19:46:24,784 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 20:47:22] 2026-03-09 19:46:24,784 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 20:47:22] 2026-03-09 19:46:24,784 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 20:47:22] 2026-03-09 19:46:24,784 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 20:47:22] 2026-03-09 19:46:24,784 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 20:47:22] 2026-03-09 19:46:24,784 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 20:47:22] 2026-03-09 19:46:24,784 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 20:47:22] 2026-03-09 19:46:24,784 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 20:47:22] 2026-03-09 19:46:24,784 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 20:47:22] 2026-03-09 19:46:24,784 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 20:47:22] 2026-03-09 19:46:24,784 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 20:47:22] 2026-03-09 19:46:24,784 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 20:47:22] 2026-03-09 19:46:24,784 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 20:47:22] 2026-03-09 19:46:24,784 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 20:47:22] 2026-03-09 19:46:24,784 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 20:47:22] 2026-03-09 19:46:24,784 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 20:47:22] 2026-03-09 19:46:24,784 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 20:47:22] 2026-03-09 19:46:24,784 | INFO     | job 7047419959 has completed (purged errors)
[2026-03-09 20:47:22] 2026-03-09 19:46:24,784 | INFO     | overall cleanup function is called
[2026-03-09 20:47:22] 2026-03-09 19:46:25,790 | INFO     | --- collectZombieJob: --- 10, [171714]
[2026-03-09 20:47:22] 2026-03-09 19:46:25,791 | INFO     | zombie collector waiting for pid 171714
[2026-03-09 20:47:22] 2026-03-09 19:46:25,791 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 20:47:22] 2026-03-09 19:46:25,791 | INFO     | collected zombie processes
[2026-03-09 20:47:22] 2026-03-09 19:46:25,791 | INFO     | will attempt to kill all subprocesses of pid=171714
[2026-03-09 20:47:22] 2026-03-09 19:46:26,198 | INFO     | process IDs to be killed: [171714] (in reverse order)
[2026-03-09 20:47:22] 2026-03-09 19:46:26,399 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 20:47:22] 2026-03-09 19:46:26,400 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 20:47:22] 2026-03-09 19:46:26,424 | INFO     | did not find any defunct processes belonging to 171714
[2026-03-09 20:47:22] 2026-03-09 19:46:26,448 | INFO     | did not find any defunct processes belonging to 171714
[2026-03-09 20:47:22] 2026-03-09 19:46:26,448 | INFO     | ready for new job
[2026-03-09 20:47:22] 2026-03-09 19:46:26,449 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 20:47:22] 2026-03-09 19:46:26,450 | INFO     | **************************************
[2026-03-09 20:47:22] 2026-03-09 19:46:26,450 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 20:47:22] 2026-03-09 19:46:26,450 | INFO     | **************************************
[2026-03-09 20:47:22] 2026-03-09 19:46:26,450 | INFO     | 
[2026-03-09 20:47:22] 2026-03-09 19:46:26,456 | INFO     | architecture information:
[2026-03-09 20:47:22] 2026-03-09 19:46:26,456 | INFO     | executing command: cat /etc/os-release
[2026-03-09 20:47:22] 2026-03-09 19:46:26,468 | INFO     | cat /etc/os-release:
[2026-03-09 20:47:22] NAME="CentOS Linux"
[2026-03-09 20:47:22] VERSION="7 (Core)"
[2026-03-09 20:47:22] ID="centos"
[2026-03-09 20:47:22] ID_LIKE="rhel fedora"
[2026-03-09 20:47:22] VERSION_ID="7"
[2026-03-09 20:47:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 20:47:22] ANSI_COLOR="0;31"
[2026-03-09 20:47:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 20:47:22] HOME_URL="https://www.centos.org/"
[2026-03-09 20:47:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 20:47:22] 
[2026-03-09 20:47:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 20:47:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 20:47:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 20:47:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 20:47:22] 
[2026-03-09 20:47:22] 2026-03-09 19:46:26,469 | INFO     | **************************************
[2026-03-09 20:47:22] 2026-03-09 19:46:26,971 | INFO     | executing command: df -mP /var/lib/boinc/var/slot16/slots/5
[2026-03-09 20:47:22] 2026-03-09 19:46:26,984 | INFO     | sufficient remaining disk space (20726153216 B)
[2026-03-09 20:47:22] 2026-03-09 19:46:26,985 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 20:47:22] 2026-03-09 19:46:26,985 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 20:47:22] 2026-03-09 19:46:26,985 | INFO     | update_server=False
[2026-03-09 20:47:22] 2026-03-09 19:46:26,985 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 20:47:22] 2026-03-09 19:46:26,985 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 20:47:22] 2026-03-09 19:46:26,985 | INFO     | aborting loop
[2026-03-09 20:47:22] 2026-03-09 19:46:27,333 | INFO     | all payload control threads have been joined
[2026-03-09 20:47:22] 2026-03-09 19:46:27,631 | INFO     | all data control threads have been joined
[2026-03-09 20:47:22] 2026-03-09 19:46:27,966 | INFO     | all job control threads have been joined
[2026-03-09 20:47:22] 2026-03-09 19:46:27,990 | INFO     | [job] retrieve thread has finished
[2026-03-09 20:47:22] 2026-03-09 19:46:27,990 | INFO     | [job] job monitor thread has finished
[2026-03-09 20:47:22] 2026-03-09 19:46:28,013 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 20:47:22] 2026-03-09 19:46:28,142 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 20:47:22] 2026-03-09 19:46:28,339 | INFO     | [payload] control thread has finished
[2026-03-09 20:47:22] 2026-03-09 19:46:28,419 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 20:47:22] 2026-03-09 19:46:28,637 | INFO     | [data] control thread has finished
[2026-03-09 20:47:22] 2026-03-09 19:46:28,701 | INFO     | [payload] failed_post thread has finished
[2026-03-09 20:47:22] 2026-03-09 19:46:28,746 | INFO     | [job] validate thread has finished
[2026-03-09 20:47:22] 2026-03-09 19:46:28,892 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 20:47:22] 2026-03-09 19:46:28,973 | INFO     | [job] control thread has finished
[2026-03-09 20:47:22] 2026-03-09 19:46:29,034 | INFO     | [payload] validate_post thread has finished
[2026-03-09 20:47:22] 2026-03-09 19:46:29,035 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 20:47:22] 2026-03-09 19:46:29,138 | INFO     | [data] copytool_in thread has finished
[2026-03-09 20:47:22] 2026-03-09 19:46:29,780 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 20:47:22] 2026-03-09 19:46:30,424 | INFO     | [data] copytool_out thread has finished
[2026-03-09 20:47:22] 2026-03-09 19:46:30,785 | INFO     | [job] queue monitor thread has finished
[2026-03-09 20:47:22] 2026-03-09 19:46:32,147 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 20:47:22] 2026-03-09 19:46:37,522 | INFO     | job.realtimelogging is not enabled
[2026-03-09 20:47:22] 2026-03-09 19:46:38,528 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 20:47:22] 2026-03-09 19:46:58,209 | INFO     | PID=165930 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-09 20:47:22] 2026-03-09 19:46:58,210 | INFO     | .. there are 56 such processes running
[2026-03-09 20:47:22] 2026-03-09 19:46:58,210 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 20:47:22] 2026-03-09 19:46:58,210 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 20:47:22] 2026-03-09 19:46:58,210 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 20:47:22] 2026-03-09 19:47:17,048 | INFO     | [monitor] cgroup control has ended
[2026-03-09 20:47:22] 2026-03-09 19:47:17,645 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22845211232064)>', '<ExcThread(monitor, started 22844974315264)>']
[2026-03-09 20:47:22] 2026-03-09 19:47:18,301 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 20:47:22] 2026-03-09 19:47:18,301 | INFO     | [monitor] control thread has ended
[2026-03-09 20:47:22] 2026-03-09 19:47:22,670 | INFO     | all workflow threads have been joined
[2026-03-09 20:47:22] 2026-03-09 19:47:22,671 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 20:47:22] 2026-03-09 19:47:22,671 | INFO     | traces error code: 0
[2026-03-09 20:47:22] 2026-03-09 19:47:22,671 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 20:47:22] 2026-03-09 19:47:22,784 [wrapper] ==== pilot stdout END ====
[2026-03-09 20:47:22] 2026-03-09 19:47:22,787 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 20:47:22] 2026-03-09 19:47:22,789 [wrapper] pilotpid: 165930
[2026-03-09 20:47:22] 2026-03-09 19:47:22,791 [wrapper] Pilot exit status: 0
[2026-03-09 20:47:22] 2026-03-09 19:47:22,797 [wrapper] pandaids: 7047419959
[2026-03-09 20:47:22] 2026-03-09 19:47:22,902 [wrapper] cleanup supervisor_pilot 1153966 165931
[2026-03-09 20:47:22] 2026-03-09 19:47:22,904 [wrapper] Test setup, not cleaning
[2026-03-09 20:47:22] 2026-03-09 19:47:22,906 [wrapper] apfmon messages muted
[2026-03-09 20:47:22] 2026-03-09 19:47:22,908 [wrapper] ==== wrapper stdout END ====
[2026-03-09 20:47:22] 2026-03-09 19:47:22,910 [wrapper] ==== wrapper stderr END ====
[2026-03-09 20:47:22]  *** Error codes and diagnostics ***
[2026-03-09 20:47:22]     "exeErrorCode": 0,
[2026-03-09 20:47:22]     "exeErrorDiag": "",
[2026-03-09 20:47:22]     "pilotErrorCode": 0,
[2026-03-09 20:47:22]     "pilotErrorDiag": "",
[2026-03-09 20:47:22]  *** Listing of results directory ***
[2026-03-09 20:47:22] total 559960
[2026-03-09 20:47:22] -rw-r--r--. 1 boinc boinc    584627 Mar  9 15:53 pilot3.tar.gz
[2026-03-09 20:47:22] -rwx------. 1 boinc boinc     36322 Mar  9 15:54 runpilot2-wrapper.sh
[2026-03-09 20:47:22] -rw-r--r--. 1 boinc boinc      5111 Mar  9 15:55 queuedata.json
[2026-03-09 20:47:22] -rw-r--r--. 1 boinc boinc       100 Mar  9 19:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 20:47:22] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 19:04 run_atlas
[2026-03-09 20:47:22] -rw-r--r--. 1 boinc boinc       105 Mar  9 19:04 job.xml
[2026-03-09 20:47:22] -rw-r--r--. 1 boinc boinc      6700 Mar  9 19:04 init_data.xml
[2026-03-09 20:47:22] -rw-r--r--. 2 boinc boinc 321716792 Mar  9 19:04 EVNT.48998020._000016.pool.root.1
[2026-03-09 20:47:22] -rw-r--r--. 2 boinc boinc     15845 Mar  9 19:04 start_atlas.sh
[2026-03-09 20:47:22] drwxrwx--x. 2 boinc boinc      4096 Mar  9 19:04 shared
[2026-03-09 20:47:22] -rw-r--r--. 2 boinc boinc    597978 Mar  9 19:04 input.tar.gz
[2026-03-09 20:47:22] -rw-r--r--. 1 boinc boinc         0 Mar  9 19:04 boinc_lockfile
[2026-03-09 20:47:22] -rw-r--r--. 1 boinc boinc      2609 Mar  9 19:04 pandaJob.out
[2026-03-09 20:47:22] -rw-------. 1 boinc boinc   1002716 Mar  9 19:05 agis_schedconf.cvmfs.json
[2026-03-09 20:47:22] -rw-------. 1 boinc boinc   1511578 Mar  9 19:05 agis_ddmendpoints.agis.ALL.json
[2026-03-09 20:47:22] -rw-------. 1 boinc boinc       443 Mar  9 19:05 workernode_map.json
[2026-03-09 20:47:22] drwx------. 5 boinc boinc      4096 Mar  9 19:05 pilot3
[2026-03-09 20:47:22] -rw-------. 1 boinc boinc 245420757 Mar  9 20:45 HITS.48998022._001745.pool.root.1
[2026-03-09 20:47:22] -rw-r--r--. 1 boinc boinc       529 Mar  9 20:46 boinc_task_state.xml
[2026-03-09 20:47:22] -rw-------. 1 boinc boinc        95 Mar  9 20:46 pilot_heartbeat.json
[2026-03-09 20:47:22] -rw-------. 1 boinc boinc      1029 Mar  9 20:46 memory_monitor_summary.json
[2026-03-09 20:47:22] -rw-------. 1 boinc boinc    282100 Mar  9 20:46 log.48998022._001745.job.log.tgz.1
[2026-03-09 20:47:22] -rw-------. 1 boinc boinc      6345 Mar  9 20:46 heartbeat.json
[2026-03-09 20:47:22] -rw-r--r--. 1 boinc boinc      8192 Mar  9 20:46 boinc_mmap_file
[2026-03-09 20:47:22] -rw-r--r--. 1 boinc boinc        27 Mar  9 20:46 wrapper_checkpoint.txt
[2026-03-09 20:47:22] -rw-------. 1 boinc boinc      4900 Mar  9 20:47 pilotlog.txt
[2026-03-09 20:47:22] -rw-------. 1 boinc boinc    883016 Mar  9 20:47 log.48998022._001745.job.log.1
[2026-03-09 20:47:22] -rw-------. 1 boinc boinc       357 Mar  9 20:47 output.list
[2026-03-09 20:47:22] -rw-r--r--. 1 boinc boinc       620 Mar  9 20:47 runtime_log
[2026-03-09 20:47:22] -rw-------. 1 boinc boinc   1177600 Mar  9 20:47 result.tar.gz
[2026-03-09 20:47:22] -rw-r--r--. 1 boinc boinc      9204 Mar  9 20:47 runtime_log.err
[2026-03-09 20:47:22] -rw-------. 1 boinc boinc       662 Mar  9 20:47 1i4KDmzArJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmm7ZLDmEf9bOo.diag
[2026-03-09 20:47:22] -rw-r--r--. 1 boinc boinc     20835 Mar  9 20:47 stderr.txt
[2026-03-09 20:47:22] HITS file was successfully produced:
[2026-03-09 20:47:22] -rw-------. 1 boinc boinc 245420757 Mar  9 20:45 shared/HITS.pool.root.1
[2026-03-09 20:47:22]  *** Contents of shared directory: ***
[2026-03-09 20:47:22] total 555612
[2026-03-09 20:47:22] -rw-r--r--. 2 boinc boinc 321716792 Mar  9 19:04 ATLAS.root_0
[2026-03-09 20:47:22] -rw-r--r--. 2 boinc boinc     15845 Mar  9 19:04 start_atlas.sh
[2026-03-09 20:47:22] -rw-r--r--. 2 boinc boinc    597978 Mar  9 19:04 input.tar.gz
[2026-03-09 20:47:22] -rw-------. 1 boinc boinc 245420757 Mar  9 20:45 HITS.pool.root.1
[2026-03-09 20:47:22] -rw-------. 1 boinc boinc   1177600 Mar  9 20:47 result.tar.gz
20:47:24 (160826): run_atlas exited; CPU time 23606.339824
20:47:24 (160826): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN