Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:17:39 (579730): wrapper (7.7.26015): starting
11:17:39 (579730): wrapper: running run_atlas (--nthreads 4)
[2026-03-16 11:17:39] Arguments: --nthreads 4
[2026-03-16 11:17:39] Threads: 4
[2026-03-16 11:17:39] Checking for CVMFS
[2026-03-16 11:17:39] No cvmfs_config command found, will try listing directly
[2026-03-16 11:17:39] CVMFS is ok
[2026-03-16 11:17:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 11:17:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 11:17:39] Further information can be found at the LHC@home message board.
[2026-03-16 11:17:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 11:17:39] Checking for apptainer binary...
[2026-03-16 11:17:39] which: no apptainer in ((null))
[2026-03-16 11:17:39] apptainer is not installed, using version from CVMFS
[2026-03-16 11:17:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 11:17:39] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot36/slots/9/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2026-03-16 11:17:39] apptainer works
[2026-03-16 11:17:39] Set ATHENA_PROC_NUMBER=4
[2026-03-16 11:17:39] Set ATHENA_CORE_NUMBER=4
[2026-03-16 11:17:39] Starting ATLAS job with PandaID=7047405235
[2026-03-16 11:17:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot36/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 14:50:32]  *** The last 200 lines of the pilot log: ***
[2026-03-16 14:50:32] 2026-03-16 13:49:43,047 | INFO     | time since job start (12698s) is within the limit (349056.0s)
[2026-03-16 14:50:32] 2026-03-16 13:49:43,266 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-16 14:50:32] 2026-03-16 13:49:43,266 | INFO     | reading metadata from: /var/lib/boinc/var/slot36/slots/9/PanDA_Pilot-7047405235/jobReport.json
[2026-03-16 14:50:32] 2026-03-16 13:49:43,268 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot36/slots/9/workernode_map.json
[2026-03-16 14:50:32] 2026-03-16 13:49:43,269 | INFO     | this job has now completed (state=finished)
[2026-03-16 14:50:32] 2026-03-16 13:49:43,269 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-16 14:50:32] 2026-03-16 13:49:43,269 | INFO     | log transfer has been attempted: DONE
[2026-03-16 14:50:32] 2026-03-16 13:49:43,269 | INFO     | job 7047405235 has finished - writing final server update
[2026-03-16 14:50:32] 2026-03-16 13:49:43,269 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2872294/.job.ad'
[2026-03-16 14:50:32] 2026-03-16 13:49:43,270 | INFO     | total number of processed events: 400 (read)
[2026-03-16 14:50:32] 2026-03-16 13:49:43,294 | INFO     | using path: /var/lib/boinc/var/slot36/slots/9/PanDA_Pilot-7047405235/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 14:50:32] 2026-03-16 13:49:43,295 | INFO     | extracted standard info from prmon json
[2026-03-16 14:50:32] 2026-03-16 13:49:43,295 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 14:50:32] 2026-03-16 13:49:43,295 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 14:50:32] 2026-03-16 13:49:43,296 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 14:50:32] 2026-03-16 13:49:43,296 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 14:50:32] 2026-03-16 13:49:43,300 | INFO     | fitting pss+swap vs Time
[2026-03-16 14:50:32] 2026-03-16 13:49:43,300 | INFO     | sum of square deviations: 2790348132.0
[2026-03-16 14:50:32] 2026-03-16 13:49:43,301 | INFO     | sum of deviations: 20249213581.0
[2026-03-16 14:50:32] 2026-03-16 13:49:43,302 | INFO     | mean x: 1773662630.5
[2026-03-16 14:50:32] 2026-03-16 13:49:43,302 | INFO     | mean y: 2310915.201923077
[2026-03-16 14:50:32] 2026-03-16 13:49:43,302 | INFO     | intersect: -12868940888.023891
[2026-03-16 14:50:32] 2026-03-16 13:49:43,302 | INFO     | chi2: 1.3186859705020306
[2026-03-16 14:50:32] 2026-03-16 13:49:43,303 | INFO     | sum of square deviations: 2593916542.0
[2026-03-16 14:50:32] 2026-03-16 13:49:43,304 | INFO     | sum of deviations: 19714618791.999996
[2026-03-16 14:50:32] 2026-03-16 13:49:43,304 | INFO     | mean x: 1773662478.0
[2026-03-16 14:50:32] 2026-03-16 13:49:43,304 | INFO     | mean y: 2310500.4187192116
[2026-03-16 14:50:32] 2026-03-16 13:49:43,304 | INFO     | intersect: -13478107644.601185
[2026-03-16 14:50:32] 2026-03-16 13:49:43,305 | INFO     | chi2: 1.3194418415253657
[2026-03-16 14:50:32] 2026-03-16 13:49:43,305 | INFO     | current chi2=1.3194418415253657 (change=-0.05732001706572423 %)
[2026-03-16 14:50:32] 2026-03-16 13:49:43,305 | INFO     | right removable region: 202
[2026-03-16 14:50:32] 2026-03-16 13:49:43,305 | INFO     | sum of square deviations: 2593916542.0
[2026-03-16 14:50:32] 2026-03-16 13:49:43,307 | INFO     | sum of deviations: -6060147174.999999
[2026-03-16 14:50:32] 2026-03-16 13:49:43,307 | INFO     | mean x: 1773662783.0
[2026-03-16 14:50:32] 2026-03-16 13:49:43,307 | INFO     | mean y: 2331089.9802955664
[2026-03-16 14:50:32] 2026-03-16 13:49:43,307 | INFO     | intersect: 4146125745.5756903
[2026-03-16 14:50:32] 2026-03-16 13:49:43,307 | INFO     | chi2: 0.006678164327845183
[2026-03-16 14:50:32] 2026-03-16 13:49:43,307 | INFO     | current chi2=0.006678164327845183 (change=99.4935743249545 %)
[2026-03-16 14:50:32] 2026-03-16 13:49:43,308 | INFO     | sum of square deviations: 2406926989.5
[2026-03-16 14:50:32] 2026-03-16 13:49:43,309 | INFO     | sum of deviations: -5160669783.999997
[2026-03-16 14:50:32] 2026-03-16 13:49:43,309 | INFO     | mean x: 1773662935.5
[2026-03-16 14:50:32] 2026-03-16 13:49:43,309 | INFO     | mean y: 2330352.616161616
[2026-03-16 14:50:32] 2026-03-16 13:49:43,309 | INFO     | intersect: 3805224565.097876
[2026-03-16 14:50:32] 2026-03-16 13:49:43,310 | INFO     | chi2: 0.006337024244339538
[2026-03-16 14:50:32] 2026-03-16 13:49:43,310 | INFO     | current chi2=0.006337024244339538 (change=5.108291242298897 %)
[2026-03-16 14:50:32] 2026-03-16 13:49:43,310 | INFO     | left removable region: 20
[2026-03-16 14:50:32] 2026-03-16 13:49:43,310 | INFO     | sum of square deviations: 1869302025.5
[2026-03-16 14:50:32] 2026-03-16 13:49:43,311 | INFO     | sum of deviations: -2100233202.4999998
[2026-03-16 14:50:32] 2026-03-16 13:49:43,311 | INFO     | mean x: 1773663057.5
[2026-03-16 14:50:32] 2026-03-16 13:49:43,311 | INFO     | mean y: 2327654.368131868
[2026-03-16 14:50:32] 2026-03-16 13:49:43,312 | INFO     | intersect: 1995106773.3084095
[2026-03-16 14:50:32] 2026-03-16 13:49:43,312 | INFO     | chi2: 0.0027524491293358768
[2026-03-16 14:50:32] 2026-03-16 13:49:43,312 | INFO     | current memory leak: -1.12 B/s (using 182 data points, chi2=0.00)
[2026-03-16 14:50:32] 2026-03-16 13:49:43,312 | INFO     | could have reported an average CPU frequency of 2664 MHz (11 samples)
[2026-03-16 14:50:32] 2026-03-16 13:49:43,313 | INFO     | ..............................
[2026-03-16 14:50:32] 2026-03-16 13:49:43,313 | INFO     | . Timing measurements:
[2026-03-16 14:50:32] 2026-03-16 13:49:43,313 | INFO     | . get job = 0 s
[2026-03-16 14:50:32] 2026-03-16 13:49:43,313 | INFO     | . initial setup = 9 s
[2026-03-16 14:50:32] 2026-03-16 13:49:43,313 | INFO     | . payload setup = 10 s
[2026-03-16 14:50:32] 2026-03-16 13:49:43,313 | INFO     | . stage-in = 0 s
[2026-03-16 14:50:32] 2026-03-16 13:49:43,313 | INFO     | . payload execution = 12668 s
[2026-03-16 14:50:32] 2026-03-16 13:49:43,313 | INFO     | . stage-out = 1 s
[2026-03-16 14:50:32] 2026-03-16 13:49:43,313 | INFO     | . log creation = 0 s
[2026-03-16 14:50:32] 2026-03-16 13:49:43,313 | INFO     | ..............................
[2026-03-16 14:50:32] 2026-03-16 13:49:43,407 | INFO     | 
[2026-03-16 14:50:32] 2026-03-16 13:49:43,407 | INFO     | job summary report
[2026-03-16 14:50:32] 2026-03-16 13:49:43,407 | INFO     | --------------------------------------------------
[2026-03-16 14:50:32] 2026-03-16 13:49:43,407 | INFO     | PanDA job id: 7047405235
[2026-03-16 14:50:32] 2026-03-16 13:49:43,407 | INFO     | task id: 48966988
[2026-03-16 14:50:32] 2026-03-16 13:49:43,407 | INFO     | errors: (none)
[2026-03-16 14:50:32] 2026-03-16 13:49:43,407 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 14:50:32] 2026-03-16 13:49:43,407 | INFO     | pilot state: finished 
[2026-03-16 14:50:32] 2026-03-16 13:49:43,407 | INFO     | transexitcode: 0
[2026-03-16 14:50:32] 2026-03-16 13:49:43,408 | INFO     | exeerrorcode: 0
[2026-03-16 14:50:32] 2026-03-16 13:49:43,408 | INFO     | exeerrordiag: 
[2026-03-16 14:50:32] 2026-03-16 13:49:43,408 | INFO     | exitcode: 0
[2026-03-16 14:50:32] 2026-03-16 13:49:43,408 | INFO     | exitmsg: OK
[2026-03-16 14:50:32] 2026-03-16 13:49:43,408 | INFO     | cpuconsumptiontime: 47134 s
[2026-03-16 14:50:32] 2026-03-16 13:49:43,408 | INFO     | nevents: 400
[2026-03-16 14:50:32] 2026-03-16 13:49:43,409 | INFO     | neventsw: 0
[2026-03-16 14:50:32] 2026-03-16 13:49:43,409 | INFO     | pid: 597009
[2026-03-16 14:50:32] 2026-03-16 13:49:43,409 | INFO     | pgrp: 597009
[2026-03-16 14:50:32] 2026-03-16 13:49:43,409 | INFO     | corecount: 4
[2026-03-16 14:50:32] 2026-03-16 13:49:43,409 | INFO     | event service: False
[2026-03-16 14:50:32] 2026-03-16 13:49:43,409 | INFO     | sizes: {0: 2279849, 1: 2280310, 12: 2280310, 12682: 2310709, 12684: 2319785, 12686: 2319923}
[2026-03-16 14:50:32] 2026-03-16 13:49:43,409 | INFO     | --------------------------------------------------
[2026-03-16 14:50:32] 2026-03-16 13:49:43,409 | INFO     | 
[2026-03-16 14:50:32] 2026-03-16 13:49:43,409 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot36/slots/9
[2026-03-16 14:50:32] 2026-03-16 13:49:43,444 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 14:50:32] 2026-03-16 13:49:43,445 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 14:50:32] 2026-03-16 13:49:43,445 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 14:50:32] 2026-03-16 13:49:43,445 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 14:50:32] 2026-03-16 13:49:43,445 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 14:50:32] 2026-03-16 13:49:43,445 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 14:50:32] 2026-03-16 13:49:43,445 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 14:50:32] 2026-03-16 13:49:43,445 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 14:50:32] 2026-03-16 13:49:43,446 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 14:50:32] 2026-03-16 13:49:43,446 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 14:50:32] 2026-03-16 13:49:43,446 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 14:50:32] 2026-03-16 13:49:43,446 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 14:50:32] 2026-03-16 13:49:43,446 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 14:50:32] 2026-03-16 13:49:43,446 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 14:50:32] 2026-03-16 13:49:43,446 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 14:50:32] 2026-03-16 13:49:43,446 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 14:50:32] 2026-03-16 13:49:43,446 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 14:50:32] 2026-03-16 13:49:43,446 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 14:50:32] 2026-03-16 13:49:43,446 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 14:50:32] 2026-03-16 13:49:43,447 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 14:50:32] 2026-03-16 13:49:43,447 | INFO     | job 7047405235 has completed (purged errors)
[2026-03-16 14:50:32] 2026-03-16 13:49:43,447 | INFO     | overall cleanup function is called
[2026-03-16 14:50:32] 2026-03-16 13:49:44,456 | INFO     | --- collectZombieJob: --- 10, [597009]
[2026-03-16 14:50:32] 2026-03-16 13:49:44,456 | INFO     | zombie collector waiting for pid 597009
[2026-03-16 14:50:32] 2026-03-16 13:49:44,456 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 14:50:32] 2026-03-16 13:49:44,456 | INFO     | collected zombie processes
[2026-03-16 14:50:32] 2026-03-16 13:49:44,456 | INFO     | will attempt to kill all subprocesses of pid=597009
[2026-03-16 14:50:32] 2026-03-16 13:49:45,323 | INFO     | process IDs to be killed: [597009] (in reverse order)
[2026-03-16 14:50:32] 2026-03-16 13:49:45,681 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 14:50:32] 2026-03-16 13:49:45,681 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 14:50:32] 2026-03-16 13:49:45,715 | INFO     | did not find any defunct processes belonging to 597009
[2026-03-16 14:50:32] 2026-03-16 13:49:45,745 | INFO     | did not find any defunct processes belonging to 597009
[2026-03-16 14:50:32] 2026-03-16 13:49:45,745 | INFO     | ready for new job
[2026-03-16 14:50:32] 2026-03-16 13:49:45,745 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 14:50:32] 2026-03-16 13:49:45,748 | INFO     | **************************************
[2026-03-16 14:50:32] 2026-03-16 13:49:45,748 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-16 14:50:32] 2026-03-16 13:49:45,748 | INFO     | **************************************
[2026-03-16 14:50:32] 2026-03-16 13:49:45,749 | INFO     | 
[2026-03-16 14:50:32] 2026-03-16 13:49:45,757 | INFO     | architecture information:
[2026-03-16 14:50:32] 2026-03-16 13:49:45,758 | INFO     | executing command: cat /etc/os-release
[2026-03-16 14:50:32] 2026-03-16 13:49:45,786 | INFO     | cat /etc/os-release:
[2026-03-16 14:50:32] NAME="CentOS Linux"
[2026-03-16 14:50:32] VERSION="7 (Core)"
[2026-03-16 14:50:32] ID="centos"
[2026-03-16 14:50:32] ID_LIKE="rhel fedora"
[2026-03-16 14:50:32] VERSION_ID="7"
[2026-03-16 14:50:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 14:50:32] ANSI_COLOR="0;31"
[2026-03-16 14:50:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 14:50:32] HOME_URL="https://www.centos.org/"
[2026-03-16 14:50:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 14:50:32] 
[2026-03-16 14:50:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 14:50:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 14:50:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 14:50:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 14:50:32] 
[2026-03-16 14:50:32] 2026-03-16 13:49:45,787 | INFO     | **************************************
[2026-03-16 14:50:32] 2026-03-16 13:49:46,289 | INFO     | executing command: df -mP /var/lib/boinc/var/slot36/slots/9
[2026-03-16 14:50:32] 2026-03-16 13:49:46,317 | INFO     | sufficient remaining disk space (134671761408 B)
[2026-03-16 14:50:32] 2026-03-16 13:49:46,317 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 14:50:32] 2026-03-16 13:49:46,318 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 14:50:32] 2026-03-16 13:49:46,318 | INFO     | update_server=False
[2026-03-16 14:50:32] 2026-03-16 13:49:46,318 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 14:50:32] 2026-03-16 13:49:46,318 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 14:50:32] 2026-03-16 13:49:46,318 | INFO     | aborting loop
[2026-03-16 14:50:32] 2026-03-16 13:49:46,319 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 14:50:32] 2026-03-16 13:49:46,670 | INFO     | all data control threads have been joined
[2026-03-16 14:50:32] 2026-03-16 13:49:47,160 | INFO     | all job control threads have been joined
[2026-03-16 14:50:32] 2026-03-16 13:49:47,161 | INFO     | all payload control threads have been joined
[2026-03-16 14:50:32] 2026-03-16 13:49:47,317 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 14:50:32] 2026-03-16 13:49:47,323 | INFO     | [job] retrieve thread has finished
[2026-03-16 14:50:32] 2026-03-16 13:49:47,324 | INFO     | [job] job monitor thread has finished
[2026-03-16 14:50:32] 2026-03-16 13:49:47,632 | INFO     | [data] copytool_in thread has finished
[2026-03-16 14:50:32] 2026-03-16 13:49:47,675 | INFO     | [data] control thread has finished
[2026-03-16 14:50:32] 2026-03-16 13:49:47,726 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 14:50:32] 2026-03-16 13:49:47,971 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 14:50:32] 2026-03-16 13:49:48,041 | INFO     | [payload] failed_post thread has finished
[2026-03-16 14:50:32] 2026-03-16 13:49:48,145 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 14:50:32] 2026-03-16 13:49:48,165 | INFO     | [job] control thread has finished
[2026-03-16 14:50:32] 2026-03-16 13:49:48,166 | INFO     | [payload] control thread has finished
[2026-03-16 14:50:32] 2026-03-16 13:49:48,324 | INFO     | [data] copytool_out thread has finished
[2026-03-16 14:50:32] 2026-03-16 13:49:48,340 | INFO     | [payload] validate_post thread has finished
[2026-03-16 14:50:32] 2026-03-16 13:49:48,417 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 14:50:32] 2026-03-16 13:49:48,526 | INFO     | [job] validate thread has finished
[2026-03-16 14:50:32] 2026-03-16 13:49:49,422 | INFO     | [job] queue monitor thread has finished
[2026-03-16 14:50:32] 2026-03-16 13:49:51,323 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 14:50:32] 2026-03-16 13:49:56,986 | INFO     | job.realtimelogging is not enabled
[2026-03-16 14:50:32] 2026-03-16 13:49:57,991 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 14:50:32] 2026-03-16 13:50:17,178 | INFO     | PID=586759 has CPU usage=12.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-16 14:50:32] 2026-03-16 13:50:17,178 | INFO     | .. there are 24 such processes running
[2026-03-16 14:50:32] 2026-03-16 13:50:17,179 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 14:50:32] 2026-03-16 13:50:17,179 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 14:50:32] 2026-03-16 13:50:17,179 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 14:50:32] 2026-03-16 13:50:25,977 | INFO     | [monitor] cgroup control has ended
[2026-03-16 14:50:32] 2026-03-16 13:50:27,397 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23333806790464)>', '<ExcThread(monitor, started 23333568788224)>']
[2026-03-16 14:50:32] 2026-03-16 13:50:28,235 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 14:50:32] 2026-03-16 13:50:28,235 | INFO     | [monitor] control thread has ended
[2026-03-16 14:50:32] 2026-03-16 13:50:32,422 | INFO     | all workflow threads have been joined
[2026-03-16 14:50:32] 2026-03-16 13:50:32,422 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 14:50:32] 2026-03-16 13:50:32,422 | INFO     | traces error code: 0
[2026-03-16 14:50:32] 2026-03-16 13:50:32,422 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 14:50:32] 2026-03-16 13:50:32,566 [wrapper] ==== pilot stdout END ====
[2026-03-16 14:50:32] 2026-03-16 13:50:32,569 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 14:50:32] 2026-03-16 13:50:32,572 [wrapper] pilotpid: 586759
[2026-03-16 14:50:32] 2026-03-16 13:50:32,574 [wrapper] Pilot exit status: 0
[2026-03-16 14:50:32] 2026-03-16 13:50:32,590 [wrapper] pandaids: 7047405235
[2026-03-16 14:50:32] 2026-03-16 13:50:32,804 [wrapper] cleanup supervisor_pilot 1061871 586760
[2026-03-16 14:50:32] 2026-03-16 13:50:32,809 [wrapper] Test setup, not cleaning
[2026-03-16 14:50:32] 2026-03-16 13:50:32,813 [wrapper] apfmon messages muted
[2026-03-16 14:50:32] 2026-03-16 13:50:32,817 [wrapper] ==== wrapper stdout END ====
[2026-03-16 14:50:32] 2026-03-16 13:50:32,820 [wrapper] ==== wrapper stderr END ====
[2026-03-16 14:50:32]  *** Error codes and diagnostics ***
[2026-03-16 14:50:32]     "exeErrorCode": 0,
[2026-03-16 14:50:32]     "exeErrorDiag": "",
[2026-03-16 14:50:32]     "pilotErrorCode": 0,
[2026-03-16 14:50:32]     "pilotErrorDiag": "",
[2026-03-16 14:50:32]  *** Listing of results directory ***
[2026-03-16 14:50:32] total 414172
[2026-03-16 14:50:32] -rw-r--r--. 1 boinc boinc      5111 Mar  9 15:53 queuedata.json
[2026-03-16 14:50:32] -rw-r--r--. 1 boinc boinc    584627 Mar  9 15:53 pilot3.tar.gz
[2026-03-16 14:50:32] -rwx------. 1 boinc boinc     36322 Mar  9 15:53 runpilot2-wrapper.sh
[2026-03-16 14:50:32] -rw-r--r--. 1 boinc boinc       100 Mar 16 11:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 14:50:32] -rwxr-xr-x. 1 boinc boinc      7986 Mar 16 11:17 run_atlas
[2026-03-16 14:50:32] -rw-r--r--. 1 boinc boinc       105 Mar 16 11:17 job.xml
[2026-03-16 14:50:32] -rw-r--r--. 1 boinc boinc      6621 Mar 16 11:17 init_data.xml
[2026-03-16 14:50:32] -rw-r--r--. 2 boinc boinc 216931171 Mar 16 11:17 EVNT.48966985._000946.pool.root.1
[2026-03-16 14:50:32] drwxrwx--x. 2 boinc boinc      4096 Mar 16 11:17 shared
[2026-03-16 14:50:32] -rw-r--r--. 2 boinc boinc    597974 Mar 16 11:17 input.tar.gz
[2026-03-16 14:50:32] -rw-r--r--. 2 boinc boinc     15845 Mar 16 11:17 start_atlas.sh
[2026-03-16 14:50:32] -rw-r--r--. 1 boinc boinc         0 Mar 16 11:17 boinc_lockfile
[2026-03-16 14:50:32] -rw-r--r--. 1 boinc boinc      2592 Mar 16 11:17 pandaJob.out
[2026-03-16 14:50:32] -rw-------. 1 boinc boinc   1006405 Mar 16 11:17 agis_schedconf.cvmfs.json
[2026-03-16 14:50:32] -rw-------. 1 boinc boinc       443 Mar 16 11:18 workernode_map.json
[2026-03-16 14:50:32] drwx------. 5 boinc boinc      4096 Mar 16 11:18 pilot3
[2026-03-16 14:50:32] -rw-------. 1 boinc boinc 199035931 Mar 16 14:49 HITS.48966988._024301.pool.root.1
[2026-03-16 14:50:32] -rw-r--r--. 1 boinc boinc       530 Mar 16 14:49 boinc_task_state.xml
[2026-03-16 14:50:32] -rw-------. 1 boinc boinc      1029 Mar 16 14:49 memory_monitor_summary.json
[2026-03-16 14:50:32] -rw-------. 1 boinc boinc   1511579 Mar 16 14:49 agis_ddmendpoints.agis.ALL.json
[2026-03-16 14:50:32] -rw-------. 1 boinc boinc    387744 Mar 16 14:49 log.48966988._024301.job.log.tgz.1
[2026-03-16 14:50:32] -rw-------. 1 boinc boinc      6358 Mar 16 14:49 heartbeat.json
[2026-03-16 14:50:32] -rw-------. 1 boinc boinc        95 Mar 16 14:50 pilot_heartbeat.json
[2026-03-16 14:50:32] -rw-r--r--. 1 boinc boinc      8192 Mar 16 14:50 boinc_mmap_file
[2026-03-16 14:50:32] -rw-r--r--. 1 boinc boinc        28 Mar 16 14:50 wrapper_checkpoint.txt
[2026-03-16 14:50:32] -rw-------. 1 boinc boinc      4902 Mar 16 14:50 pilotlog.txt
[2026-03-16 14:50:32] -rw-------. 1 boinc boinc   1716972 Mar 16 14:50 log.48966988._024301.job.log.1
[2026-03-16 14:50:32] -rw-------. 1 boinc boinc       357 Mar 16 14:50 output.list
[2026-03-16 14:50:32] -rw-r--r--. 1 boinc boinc       620 Mar 16 14:50 runtime_log
[2026-03-16 14:50:32] -rw-------. 1 boinc boinc   2119680 Mar 16 14:50 result.tar.gz
[2026-03-16 14:50:32] -rw-r--r--. 1 boinc boinc      9205 Mar 16 14:50 runtime_log.err
[2026-03-16 14:50:32] -rw-------. 1 boinc boinc       666 Mar 16 14:50 16OMDmgArJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmH5ZLDmWjIBgm.diag
[2026-03-16 14:50:32] -rw-r--r--. 1 boinc boinc     21113 Mar 16 14:50 stderr.txt
[2026-03-16 14:50:32] HITS file was successfully produced:
[2026-03-16 14:50:32] -rw-------. 1 boinc boinc 199035931 Mar 16 14:49 shared/HITS.pool.root.1
[2026-03-16 14:50:32]  *** Contents of shared directory: ***
[2026-03-16 14:50:32] total 408900
[2026-03-16 14:50:32] -rw-r--r--. 2 boinc boinc 216931171 Mar 16 11:17 ATLAS.root_0
[2026-03-16 14:50:32] -rw-r--r--. 2 boinc boinc    597974 Mar 16 11:17 input.tar.gz
[2026-03-16 14:50:32] -rw-r--r--. 2 boinc boinc     15845 Mar 16 11:17 start_atlas.sh
[2026-03-16 14:50:32] -rw-------. 1 boinc boinc 199035931 Mar 16 14:49 HITS.pool.root.1
[2026-03-16 14:50:32] -rw-------. 1 boinc boinc   2119680 Mar 16 14:50 result.tar.gz
14:50:34 (579730): run_atlas exited; CPU time 47912.120924
14:50:34 (579730): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN