Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:47:59 (1596765): wrapper (7.7.26015): starting
23:47:59 (1596765): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 23:47:59] Arguments: --nthreads 4
[2026-03-10 23:47:59] Threads: 4
[2026-03-10 23:47:59] Checking for CVMFS
[2026-03-10 23:47:59] No cvmfs_config command found, will try listing directly
[2026-03-10 23:47:59] CVMFS is ok
[2026-03-10 23:47:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 23:47:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 23:47:59] Further information can be found at the LHC@home message board.
[2026-03-10 23:47:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 23:47:59] Checking for apptainer binary...
[2026-03-10 23:47:59] which: no apptainer in ((null))
[2026-03-10 23:47:59] apptainer is not installed, using version from CVMFS
[2026-03-10 23:47:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 23:47:59] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot212/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2026-03-10 23:47:59] apptainer works
[2026-03-10 23:47:59] Set ATHENA_PROC_NUMBER=4
[2026-03-10 23:47:59] Set ATHENA_CORE_NUMBER=4
[2026-03-10 23:47:59] Starting ATLAS job with PandaID=7047150274
[2026-03-10 23:47:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot212/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 01:52:30]  *** The last 200 lines of the pilot log: ***
[2026-03-11 01:52:30] 2026-03-11 00:51:33,792 | INFO     | reading metadata from: /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7047150274/jobReport.json
[2026-03-11 01:52:30] 2026-03-11 00:51:33,793 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot212/slots/0/workernode_map.json
[2026-03-11 01:52:30] 2026-03-11 00:51:33,793 | INFO     | this job has now completed (state=finished)
[2026-03-11 01:52:30] 2026-03-11 00:51:33,793 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-11 01:52:30] 2026-03-11 00:51:33,793 | INFO     | log transfer has been attempted: DONE
[2026-03-11 01:52:30] 2026-03-11 00:51:33,793 | INFO     | job 7047150274 has finished - writing final server update
[2026-03-11 01:52:30] 2026-03-11 00:51:33,794 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_901031/.job.ad'
[2026-03-11 01:52:30] 2026-03-11 00:51:33,794 | INFO     | total number of processed events: 400 (read)
[2026-03-11 01:52:30] 2026-03-11 00:51:33,812 | INFO     | using path: /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7047150274/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 01:52:30] 2026-03-11 00:51:33,813 | INFO     | extracted standard info from prmon json
[2026-03-11 01:52:30] 2026-03-11 00:51:33,813 | INFO     | extracted standard memory fields from prmon json
[2026-03-11 01:52:30] 2026-03-11 00:51:33,813 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-11 01:52:30] 2026-03-11 00:51:33,813 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-11 01:52:30] 2026-03-11 00:51:33,813 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-11 01:52:30] 2026-03-11 00:51:33,815 | INFO     | fitting pss+swap vs Time
[2026-03-11 01:52:30] 2026-03-11 00:51:33,815 | INFO     | sum of square deviations: 549294020.0
[2026-03-11 01:52:30] 2026-03-11 00:51:33,815 | INFO     | sum of deviations: 15170555796.0
[2026-03-11 01:52:30] 2026-03-11 00:51:33,815 | INFO     | mean x: 1773186575.0
[2026-03-11 01:52:30] 2026-03-11 00:51:33,815 | INFO     | mean y: 2342037.7190082646
[2026-03-11 01:52:30] 2026-03-11 00:51:33,815 | INFO     | intersect: -48970020473.62899
[2026-03-11 01:52:30] 2026-03-11 00:51:33,816 | INFO     | chi2: 1.1173003164064712
[2026-03-11 01:52:30] 2026-03-11 00:51:33,816 | INFO     | sum of square deviations: 483971865.0
[2026-03-11 01:52:30] 2026-03-11 00:51:33,816 | INFO     | sum of deviations: 14465687589.5
[2026-03-11 01:52:30] 2026-03-11 00:51:33,816 | INFO     | mean x: 1773186422.5
[2026-03-11 01:52:30] 2026-03-11 00:51:33,816 | INFO     | mean y: 2340391.146551724
[2026-03-11 01:52:30] 2026-03-11 00:51:33,816 | INFO     | intersect: -52997353766.339554
[2026-03-11 01:52:30] 2026-03-11 00:51:33,816 | INFO     | chi2: 1.1182875034336883
[2026-03-11 01:52:30] 2026-03-11 00:51:33,816 | INFO     | current chi2=1.1182875034336883 (change=-0.08835467176740525 %)
[2026-03-11 01:52:30] 2026-03-11 00:51:33,816 | INFO     | right removable region: 115
[2026-03-11 01:52:30] 2026-03-11 00:51:33,816 | INFO     | sum of square deviations: 483971865.0
[2026-03-11 01:52:30] 2026-03-11 00:51:33,817 | INFO     | sum of deviations: 2493552387.9999995
[2026-03-11 01:52:30] 2026-03-11 00:51:33,817 | INFO     | mean x: 1773186727.5
[2026-03-11 01:52:30] 2026-03-11 00:51:33,817 | INFO     | mean y: 2370926.8103448274
[2026-03-11 01:52:30] 2026-03-11 00:51:33,817 | INFO     | intersect: -9133560970.238111
[2026-03-11 01:52:30] 2026-03-11 00:51:33,817 | INFO     | chi2: 0.0010260977767770202
[2026-03-11 01:52:30] 2026-03-11 00:51:33,818 | INFO     | current chi2=0.0010260977767770202 (change=99.9081627596708 %)
[2026-03-11 01:52:30] 2026-03-11 00:51:33,818 | INFO     | sum of square deviations: 424045160.0
[2026-03-11 01:52:30] 2026-03-11 00:51:33,818 | INFO     | sum of deviations: 2033083640.0000002
[2026-03-11 01:52:30] 2026-03-11 00:51:33,818 | INFO     | mean x: 1773186880.0
[2026-03-11 01:52:30] 2026-03-11 00:51:33,818 | INFO     | mean y: 2372087.3603603602
[2026-03-11 01:52:30] 2026-03-11 00:51:33,818 | INFO     | intersect: -8499168730.581399
[2026-03-11 01:52:30] 2026-03-11 00:51:33,818 | INFO     | chi2: 0.000851166997868861
[2026-03-11 01:52:30] 2026-03-11 00:51:33,818 | INFO     | current chi2=0.000851166997868861 (change=17.048158846773642 %)
[2026-03-11 01:52:30] 2026-03-11 00:51:33,818 | INFO     | left removable region: 20
[2026-03-11 01:52:30] 2026-03-11 00:51:33,818 | INFO     | sum of square deviations: 265828240.0
[2026-03-11 01:52:30] 2026-03-11 00:51:33,819 | INFO     | sum of deviations: 1400831511.0000007
[2026-03-11 01:52:30] 2026-03-11 00:51:33,819 | INFO     | mean x: 1773187002.0
[2026-03-11 01:52:30] 2026-03-11 00:51:33,819 | INFO     | mean y: 2373190.9789473685
[2026-03-11 01:52:30] 2026-03-11 00:51:33,819 | INFO     | intersect: -9341766571.211939
[2026-03-11 01:52:30] 2026-03-11 00:51:33,819 | INFO     | chi2: 0.0005689501030689559
[2026-03-11 01:52:30] 2026-03-11 00:51:33,819 | INFO     | current memory leak: 5.27 B/s (using 95 data points, chi2=0.00)
[2026-03-11 01:52:30] 2026-03-11 00:51:33,819 | INFO     | could have reported an average CPU frequency of 3591 MHz (8 samples)
[2026-03-11 01:52:30] 2026-03-11 00:51:33,819 | INFO     | ..............................
[2026-03-11 01:52:30] 2026-03-11 00:51:33,819 | INFO     | . Timing measurements:
[2026-03-11 01:52:30] 2026-03-11 00:51:33,819 | INFO     | . get job = 0 s
[2026-03-11 01:52:30] 2026-03-11 00:51:33,819 | INFO     | . initial setup = 5 s
[2026-03-11 01:52:30] 2026-03-11 00:51:33,819 | INFO     | . payload setup = 5 s
[2026-03-11 01:52:30] 2026-03-11 00:51:33,819 | INFO     | . stage-in = 0 s
[2026-03-11 01:52:30] 2026-03-11 00:51:33,819 | INFO     | . payload execution = 7377 s
[2026-03-11 01:52:30] 2026-03-11 00:51:33,819 | INFO     | . stage-out = 0 s
[2026-03-11 01:52:30] 2026-03-11 00:51:33,819 | INFO     | . log creation = 0 s
[2026-03-11 01:52:30] 2026-03-11 00:51:33,819 | INFO     | ..............................
[2026-03-11 01:52:30] 2026-03-11 00:51:33,871 | INFO     | 
[2026-03-11 01:52:30] 2026-03-11 00:51:33,872 | INFO     | job summary report
[2026-03-11 01:52:30] 2026-03-11 00:51:33,872 | INFO     | --------------------------------------------------
[2026-03-11 01:52:30] 2026-03-11 00:51:33,872 | INFO     | PanDA job id: 7047150274
[2026-03-11 01:52:30] 2026-03-11 00:51:33,872 | INFO     | task id: 48998032
[2026-03-11 01:52:30] 2026-03-11 00:51:33,872 | INFO     | errors: (none)
[2026-03-11 01:52:30] 2026-03-11 00:51:33,872 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 01:52:30] 2026-03-11 00:51:33,872 | INFO     | pilot state: finished 
[2026-03-11 01:52:30] 2026-03-11 00:51:33,872 | INFO     | transexitcode: 0
[2026-03-11 01:52:30] 2026-03-11 00:51:33,872 | INFO     | exeerrorcode: 0
[2026-03-11 01:52:30] 2026-03-11 00:51:33,872 | INFO     | exeerrordiag: 
[2026-03-11 01:52:30] 2026-03-11 00:51:33,872 | INFO     | exitcode: 0
[2026-03-11 01:52:30] 2026-03-11 00:51:33,872 | INFO     | exitmsg: OK
[2026-03-11 01:52:30] 2026-03-11 00:51:33,872 | INFO     | cpuconsumptiontime: 28392 s
[2026-03-11 01:52:30] 2026-03-11 00:51:33,872 | INFO     | nevents: 400
[2026-03-11 01:52:30] 2026-03-11 00:51:33,872 | INFO     | neventsw: 0
[2026-03-11 01:52:30] 2026-03-11 00:51:33,872 | INFO     | pid: 1617316
[2026-03-11 01:52:30] 2026-03-11 00:51:33,872 | INFO     | pgrp: 1617316
[2026-03-11 01:52:30] 2026-03-11 00:51:33,872 | INFO     | corecount: 4
[2026-03-11 01:52:30] 2026-03-11 00:51:33,872 | INFO     | event service: False
[2026-03-11 01:52:30] 2026-03-11 00:51:33,872 | INFO     | sizes: {0: 2280235, 11: 2280235, 7386: 2307639, 7387: 2316661, 7390: 2316911}
[2026-03-11 01:52:30] 2026-03-11 00:51:33,872 | INFO     | --------------------------------------------------
[2026-03-11 01:52:30] 2026-03-11 00:51:33,872 | INFO     | 
[2026-03-11 01:52:30] 2026-03-11 00:51:33,872 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot212/slots/0
[2026-03-11 01:52:30] 2026-03-11 00:51:33,891 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 01:52:30] 2026-03-11 00:51:33,892 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 01:52:30] 2026-03-11 00:51:33,892 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 01:52:30] 2026-03-11 00:51:33,892 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 01:52:30] 2026-03-11 00:51:33,892 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 01:52:30] 2026-03-11 00:51:33,892 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 01:52:30] 2026-03-11 00:51:33,892 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 01:52:30] 2026-03-11 00:51:33,892 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 01:52:30] 2026-03-11 00:51:33,892 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 01:52:30] 2026-03-11 00:51:33,892 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 01:52:30] 2026-03-11 00:51:33,892 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 01:52:30] 2026-03-11 00:51:33,892 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 01:52:30] 2026-03-11 00:51:33,892 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 01:52:30] 2026-03-11 00:51:33,892 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 01:52:30] 2026-03-11 00:51:33,892 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 01:52:30] 2026-03-11 00:51:33,892 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 01:52:30] 2026-03-11 00:51:33,892 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 01:52:30] 2026-03-11 00:51:33,892 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 01:52:30] 2026-03-11 00:51:33,892 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 01:52:30] 2026-03-11 00:51:33,892 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 01:52:30] 2026-03-11 00:51:33,892 | INFO     | job 7047150274 has completed (purged errors)
[2026-03-11 01:52:30] 2026-03-11 00:51:33,892 | INFO     | overall cleanup function is called
[2026-03-11 01:52:30] 2026-03-11 00:51:34,899 | INFO     | --- collectZombieJob: --- 10, [1617316]
[2026-03-11 01:52:30] 2026-03-11 00:51:34,899 | INFO     | zombie collector waiting for pid 1617316
[2026-03-11 01:52:30] 2026-03-11 00:51:34,899 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 01:52:30] 2026-03-11 00:51:34,899 | INFO     | collected zombie processes
[2026-03-11 01:52:30] 2026-03-11 00:51:34,899 | INFO     | will attempt to kill all subprocesses of pid=1617316
[2026-03-11 01:52:30] 2026-03-11 00:51:35,380 | INFO     | process IDs to be killed: [1617316] (in reverse order)
[2026-03-11 01:52:30] 2026-03-11 00:51:35,617 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 01:52:30] 2026-03-11 00:51:35,617 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 01:52:30] 2026-03-11 00:51:35,652 | INFO     | did not find any defunct processes belonging to 1617316
[2026-03-11 01:52:30] 2026-03-11 00:51:35,686 | INFO     | did not find any defunct processes belonging to 1617316
[2026-03-11 01:52:30] 2026-03-11 00:51:35,686 | INFO     | ready for new job
[2026-03-11 01:52:30] 2026-03-11 00:51:35,686 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 01:52:30] 2026-03-11 00:51:35,688 | INFO     | **************************************
[2026-03-11 01:52:30] 2026-03-11 00:51:35,688 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-11 01:52:30] 2026-03-11 00:51:35,688 | INFO     | **************************************
[2026-03-11 01:52:30] 2026-03-11 00:51:35,688 | INFO     | 
[2026-03-11 01:52:30] 2026-03-11 00:51:35,694 | INFO     | architecture information:
[2026-03-11 01:52:30] 2026-03-11 00:51:35,695 | INFO     | executing command: cat /etc/os-release
[2026-03-11 01:52:30] 2026-03-11 00:51:35,710 | INFO     | cat /etc/os-release:
[2026-03-11 01:52:30] NAME="CentOS Linux"
[2026-03-11 01:52:30] VERSION="7 (Core)"
[2026-03-11 01:52:30] ID="centos"
[2026-03-11 01:52:30] ID_LIKE="rhel fedora"
[2026-03-11 01:52:30] VERSION_ID="7"
[2026-03-11 01:52:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 01:52:30] ANSI_COLOR="0;31"
[2026-03-11 01:52:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 01:52:30] HOME_URL="https://www.centos.org/"
[2026-03-11 01:52:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 01:52:30] 
[2026-03-11 01:52:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 01:52:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 01:52:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 01:52:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 01:52:30] 
[2026-03-11 01:52:30] 2026-03-11 00:51:35,710 | INFO     | **************************************
[2026-03-11 01:52:30] 2026-03-11 00:51:36,212 | INFO     | executing command: df -mP /var/lib/boinc/var/slot212/slots/0
[2026-03-11 01:52:30] 2026-03-11 00:51:36,231 | INFO     | sufficient remaining disk space (23202889728 B)
[2026-03-11 01:52:30] 2026-03-11 00:51:36,231 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 01:52:30] 2026-03-11 00:51:36,231 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 01:52:30] 2026-03-11 00:51:36,231 | INFO     | update_server=False
[2026-03-11 01:52:30] 2026-03-11 00:51:36,231 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 01:52:30] 2026-03-11 00:51:36,232 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 01:52:30] 2026-03-11 00:51:36,422 | INFO     | job.realtimelogging is not enabled
[2026-03-11 01:52:30] 2026-03-11 00:51:36,587 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 01:52:30] 2026-03-11 00:51:36,690 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-11 01:52:30] 2026-03-11 00:51:36,690 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-11 01:52:30] 2026-03-11 00:51:36,690 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 01:52:30] 2026-03-11 00:51:36,690 | INFO     | will abort loop
[2026-03-11 01:52:30] 2026-03-11 00:51:36,820 | INFO     | all data control threads have been joined
[2026-03-11 01:52:30] 2026-03-11 00:51:37,236 | INFO     | [job] retrieve thread has finished
[2026-03-11 01:52:30] 2026-03-11 00:51:37,252 | INFO     | all job control threads have been joined
[2026-03-11 01:52:30] 2026-03-11 00:51:37,427 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 01:52:30] 2026-03-11 00:51:37,506 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 01:52:30] 2026-03-11 00:51:37,521 | INFO     | all payload control threads have been joined
[2026-03-11 01:52:30] 2026-03-11 00:51:37,588 | INFO     | [job] validate thread has finished
[2026-03-11 01:52:30] 2026-03-11 00:51:37,617 | INFO     | [payload] validate_post thread has finished
[2026-03-11 01:52:30] 2026-03-11 00:51:37,664 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 01:52:30] 2026-03-11 00:51:37,695 | INFO     | [job] job monitor thread has finished
[2026-03-11 01:52:30] 2026-03-11 00:51:37,711 | INFO     | [data] copytool_in thread has finished
[2026-03-11 01:52:30] 2026-03-11 00:51:37,825 | INFO     | [data] control thread has finished
[2026-03-11 01:52:30] 2026-03-11 00:51:38,255 | INFO     | [job] control thread has finished
[2026-03-11 01:52:30] 2026-03-11 00:51:38,526 | INFO     | [payload] control thread has finished
[2026-03-11 01:52:30] 2026-03-11 00:51:38,543 | INFO     | [payload] failed_post thread has finished
[2026-03-11 01:52:30] 2026-03-11 00:51:38,592 | INFO     | [data] copytool_out thread has finished
[2026-03-11 01:52:30] 2026-03-11 00:51:38,639 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 01:52:30] 2026-03-11 00:51:38,881 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 01:52:30] 2026-03-11 00:51:39,886 | INFO     | [job] queue monitor thread has finished
[2026-03-11 01:52:30] 2026-03-11 00:51:40,237 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 01:52:30] 2026-03-11 00:52:06,505 | INFO     | PID=1605178 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-11 01:52:30] 2026-03-11 00:52:06,509 | INFO     | .. there are 43 such processes running
[2026-03-11 01:52:30] 2026-03-11 00:52:06,509 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 01:52:30] 2026-03-11 00:52:06,509 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 01:52:30] 2026-03-11 00:52:06,509 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 01:52:30] 2026-03-11 00:52:24,743 | INFO     | [monitor] cgroup control has ended
[2026-03-11 01:52:30] 2026-03-11 00:52:24,936 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23356378285888)>', '<ExcThread(monitor, started 23356140435200)>']
[2026-03-11 01:52:30] 2026-03-11 00:52:25,604 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 01:52:30] 2026-03-11 00:52:25,604 | INFO     | [monitor] control thread has ended
[2026-03-11 01:52:30] 2026-03-11 00:52:29,961 | INFO     | all workflow threads have been joined
[2026-03-11 01:52:30] 2026-03-11 00:52:29,961 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 01:52:30] 2026-03-11 00:52:29,961 | INFO     | traces error code: 0
[2026-03-11 01:52:30] 2026-03-11 00:52:29,962 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 01:52:30] 2026-03-11 00:52:30,120 [wrapper] ==== pilot stdout END ====
[2026-03-11 01:52:30] 2026-03-11 00:52:30,122 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 01:52:30] 2026-03-11 00:52:30,125 [wrapper] pilotpid: 1605178
[2026-03-11 01:52:30] 2026-03-11 00:52:30,127 [wrapper] Pilot exit status: 0
[2026-03-11 01:52:30] 2026-03-11 00:52:30,135 [wrapper] pandaids: 7047150274
[2026-03-11 01:52:30] 2026-03-11 00:52:30,270 [wrapper] cleanup supervisor_pilot 2554140 1605179
[2026-03-11 01:52:30] 2026-03-11 00:52:30,272 [wrapper] Test setup, not cleaning
[2026-03-11 01:52:30] 2026-03-11 00:52:30,275 [wrapper] apfmon messages muted
[2026-03-11 01:52:30] 2026-03-11 00:52:30,278 [wrapper] ==== wrapper stdout END ====
[2026-03-11 01:52:30] 2026-03-11 00:52:30,280 [wrapper] ==== wrapper stderr END ====
[2026-03-11 01:52:30]  *** Error codes and diagnostics ***
[2026-03-11 01:52:30]     "exeErrorCode": 0,
[2026-03-11 01:52:30]     "exeErrorDiag": "",
[2026-03-11 01:52:30]     "pilotErrorCode": 0,
[2026-03-11 01:52:30]     "pilotErrorDiag": "",
[2026-03-11 01:52:30]  *** Listing of results directory ***
[2026-03-11 01:52:30] total 638268
[2026-03-11 01:52:30] -rw-r--r--. 1 boinc boinc    584627 Mar  9 10:23 pilot3.tar.gz
[2026-03-11 01:52:30] -rwx------. 1 boinc boinc     36322 Mar  9 10:26 runpilot2-wrapper.sh
[2026-03-11 01:52:30] -rw-r--r--. 1 boinc boinc      5111 Mar  9 10:27 queuedata.json
[2026-03-11 01:52:30] -rw-r--r--. 1 boinc boinc       100 Mar 10 23:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 01:52:30] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 23:47 run_atlas
[2026-03-11 01:52:30] -rw-r--r--. 1 boinc boinc       105 Mar 10 23:47 job.xml
[2026-03-11 01:52:30] -rw-r--r--. 2 boinc boinc    597938 Mar 10 23:47 input.tar.gz
[2026-03-11 01:52:30] -rw-r--r--. 1 boinc boinc      6708 Mar 10 23:47 init_data.xml
[2026-03-11 01:52:30] -rw-r--r--. 2 boinc boinc 359758940 Mar 10 23:47 EVNT.48998030._000002.pool.root.1
[2026-03-11 01:52:30] -rw-r--r--. 2 boinc boinc     15845 Mar 10 23:47 start_atlas.sh
[2026-03-11 01:52:30] drwxrwx--x. 2 boinc boinc      4096 Mar 10 23:47 shared
[2026-03-11 01:52:30] -rw-r--r--. 1 boinc boinc         0 Mar 10 23:47 boinc_lockfile
[2026-03-11 01:52:30] -rw-r--r--. 1 boinc boinc      2556 Mar 10 23:47 pandaJob.out
[2026-03-11 01:52:30] -rw-------. 1 boinc boinc   1006644 Mar 10 23:48 agis_schedconf.cvmfs.json
[2026-03-11 01:52:30] -rw-------. 1 boinc boinc   1511578 Mar 10 23:48 agis_ddmendpoints.agis.ALL.json
[2026-03-11 01:52:30] -rw-------. 1 boinc boinc       445 Mar 10 23:48 workernode_map.json
[2026-03-11 01:52:30] drwx------. 5 boinc boinc      4096 Mar 10 23:48 pilot3
[2026-03-11 01:52:30] -rw-r--r--. 1 boinc boinc       528 Mar 11 01:50 boinc_task_state.xml
[2026-03-11 01:52:30] -rw-------. 1 boinc boinc 287122683 Mar 11 01:50 HITS.48998032._000050.pool.root.1
[2026-03-11 01:52:30] -rw-------. 1 boinc boinc      1031 Mar 11 01:51 memory_monitor_summary.json
[2026-03-11 01:52:30] -rw-------. 1 boinc boinc        95 Mar 11 01:51 pilot_heartbeat.json
[2026-03-11 01:52:30] -rw-------. 1 boinc boinc    321318 Mar 11 01:51 log.48998032._000050.job.log.tgz.1
[2026-03-11 01:52:30] -rw-------. 1 boinc boinc      6348 Mar 11 01:51 heartbeat.json
[2026-03-11 01:52:30] -rw-r--r--. 1 boinc boinc      8192 Mar 11 01:52 boinc_mmap_file
[2026-03-11 01:52:30] -rw-r--r--. 1 boinc boinc        26 Mar 11 01:52 wrapper_checkpoint.txt
[2026-03-11 01:52:30] -rw-------. 1 boinc boinc      5088 Mar 11 01:52 pilotlog.txt
[2026-03-11 01:52:30] -rw-------. 1 boinc boinc   1060405 Mar 11 01:52 log.48998032._000050.job.log.1
[2026-03-11 01:52:30] -rw-------. 1 boinc boinc       357 Mar 11 01:52 output.list
[2026-03-11 01:52:30] -rw-r--r--. 1 boinc boinc       620 Mar 11 01:52 runtime_log
[2026-03-11 01:52:30] -rw-------. 1 boinc boinc   1402880 Mar 11 01:52 result.tar.gz
[2026-03-11 01:52:30] -rw-r--r--. 1 boinc boinc      9221 Mar 11 01:52 runtime_log.err
[2026-03-11 01:52:30] -rw-------. 1 boinc boinc       663 Mar 11 01:52 ARELDmA4lJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmy8bLDm7Cchan.diag
[2026-03-11 01:52:30] -rw-r--r--. 1 boinc boinc     21092 Mar 11 01:52 stderr.txt
[2026-03-11 01:52:30] HITS file was successfully produced:
[2026-03-11 01:52:30] -rw-------. 1 boinc boinc 287122683 Mar 11 01:50 shared/HITS.pool.root.1
[2026-03-11 01:52:30]  *** Contents of shared directory: ***
[2026-03-11 01:52:30] total 633704
[2026-03-11 01:52:30] -rw-r--r--. 2 boinc boinc    597938 Mar 10 23:47 input.tar.gz
[2026-03-11 01:52:30] -rw-r--r--. 2 boinc boinc 359758940 Mar 10 23:47 ATLAS.root_0
[2026-03-11 01:52:30] -rw-r--r--. 2 boinc boinc     15845 Mar 10 23:47 start_atlas.sh
[2026-03-11 01:52:30] -rw-------. 1 boinc boinc 287122683 Mar 11 01:50 HITS.pool.root.1
[2026-03-11 01:52:30] -rw-------. 1 boinc boinc   1402880 Mar 11 01:52 result.tar.gz
01:52:32 (1596765): run_atlas exited; CPU time 28737.079662
01:52:32 (1596765): called boinc_finish(0)

</stderr_txt>
]]>

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