Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:11:45 (2649282): wrapper (7.7.26015): starting
03:11:45 (2649282): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 03:11:45] Arguments: --nthreads 4
[2026-03-10 03:11:45] Threads: 4
[2026-03-10 03:11:45] Checking for CVMFS
[2026-03-10 03:11:45] No cvmfs_config command found, will try listing directly
[2026-03-10 03:11:45] CVMFS is ok
[2026-03-10 03:11:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 03:11:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 03:11:45] Further information can be found at the LHC@home message board.
[2026-03-10 03:11:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 03:11:45] Checking for apptainer binary...
[2026-03-10 03:11:45] which: no apptainer in ((null))
[2026-03-10 03:11:45] apptainer is not installed, using version from CVMFS
[2026-03-10 03:11:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 03:11:45] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot40/slots/10/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-10 03:11:45] apptainer works
[2026-03-10 03:11:45] Set ATHENA_PROC_NUMBER=4
[2026-03-10 03:11:45] Set ATHENA_CORE_NUMBER=4
[2026-03-10 03:11:45] Starting ATLAS job with PandaID=7047365804
[2026-03-10 03:11:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot40/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 04:56:16]  *** The last 200 lines of the pilot log: ***
[2026-03-10 04:56:16] 2026-03-10 03:55:25,583 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 04:56:16] 2026-03-10 03:55:25,583 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 04:56:16] 2026-03-10 03:55:25,583 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 04:56:16] 2026-03-10 03:55:25,583 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 04:56:16] 2026-03-10 03:55:25,584 | INFO     | fitting pss+swap vs Time
[2026-03-10 04:56:16] 2026-03-10 03:55:25,585 | INFO     | sum of square deviations: 329031285.5
[2026-03-10 04:56:16] 2026-03-10 03:55:25,585 | INFO     | sum of deviations: 4156689511.0
[2026-03-10 04:56:16] 2026-03-10 03:55:25,585 | INFO     | mean x: 1773111821.5
[2026-03-10 04:56:16] 2026-03-10 03:55:25,585 | INFO     | mean y: 2273477.1960784313
[2026-03-10 04:56:16] 2026-03-10 03:55:25,585 | INFO     | intersect: -22397649068.343
[2026-03-10 04:56:16] 2026-03-10 03:55:25,585 | INFO     | chi2: 1.9451771381972758
[2026-03-10 04:56:16] 2026-03-10 03:55:25,585 | INFO     | sum of square deviations: 282974608.0
[2026-03-10 04:56:16] 2026-03-10 03:55:25,586 | INFO     | sum of deviations: 10094034292.0
[2026-03-10 04:56:16] 2026-03-10 03:55:25,586 | INFO     | mean x: 1773111669.0
[2026-03-10 04:56:16] 2026-03-10 03:55:25,586 | INFO     | mean y: 2292290.680412371
[2026-03-10 04:56:16] 2026-03-10 03:55:25,586 | INFO     | intersect: -63246668868.517845
[2026-03-10 04:56:16] 2026-03-10 03:55:25,586 | INFO     | chi2: 1.118047338072844
[2026-03-10 04:56:16] 2026-03-10 03:55:25,586 | INFO     | current chi2=1.118047338072844 (change=42.52208109390941 %)
[2026-03-10 04:56:16] 2026-03-10 03:55:25,586 | INFO     | sum of square deviations: 241429643.0
[2026-03-10 04:56:16] 2026-03-10 03:55:25,586 | INFO     | sum of deviations: 9465840127.0
[2026-03-10 04:56:16] 2026-03-10 03:55:25,586 | INFO     | mean x: 1773111516.5
[2026-03-10 04:56:16] 2026-03-10 03:55:25,586 | INFO     | mean y: 2289982.7391304346
[2026-03-10 04:56:16] 2026-03-10 03:55:25,586 | INFO     | intersect: -69516887256.53435
[2026-03-10 04:56:16] 2026-03-10 03:55:25,586 | INFO     | chi2: 1.1201394916309009
[2026-03-10 04:56:16] 2026-03-10 03:55:25,586 | INFO     | current chi2=1.1201394916309009 (change=-0.18712566872732983 %)
[2026-03-10 04:56:16] 2026-03-10 03:55:25,586 | INFO     | right removable region: 91
[2026-03-10 04:56:16] 2026-03-10 03:55:25,586 | INFO     | sum of square deviations: 282974608.0
[2026-03-10 04:56:16] 2026-03-10 03:55:25,587 | INFO     | sum of deviations: -5487589463.0
[2026-03-10 04:56:16] 2026-03-10 03:55:25,587 | INFO     | mean x: 1773111974.0
[2026-03-10 04:56:16] 2026-03-10 03:55:25,587 | INFO     | mean y: 2304403.030927835
[2026-03-10 04:56:16] 2026-03-10 03:55:25,587 | INFO     | intersect: 34387405787.256645
[2026-03-10 04:56:16] 2026-03-10 03:55:25,587 | INFO     | chi2: 0.8619868675732416
[2026-03-10 04:56:16] 2026-03-10 03:55:25,587 | INFO     | current chi2=0.8619868675732416 (change=55.68594496375267 %)
[2026-03-10 04:56:16] 2026-03-10 03:55:25,587 | INFO     | sum of square deviations: 241429643.0
[2026-03-10 04:56:16] 2026-03-10 03:55:25,587 | INFO     | sum of deviations: -5550367521.5
[2026-03-10 04:56:16] 2026-03-10 03:55:25,587 | INFO     | mean x: 1773112126.5
[2026-03-10 04:56:16] 2026-03-10 03:55:25,587 | INFO     | mean y: 2304622.336956522
[2026-03-10 04:56:16] 2026-03-10 03:55:25,587 | INFO     | intersect: 40765418201.15876
[2026-03-10 04:56:16] 2026-03-10 03:55:25,587 | INFO     | chi2: 0.862903027756965
[2026-03-10 04:56:16] 2026-03-10 03:55:25,587 | INFO     | current chi2=0.862903027756965 (change=-0.10628470318842531 %)
[2026-03-10 04:56:16] 2026-03-10 03:55:25,587 | INFO     | left removable region: 20
[2026-03-10 04:56:16] 2026-03-10 03:55:25,588 | INFO     | sum of square deviations: 110960220.0
[2026-03-10 04:56:16] 2026-03-10 03:55:25,588 | INFO     | sum of deviations: 981673.000000013
[2026-03-10 04:56:16] 2026-03-10 03:55:25,588 | INFO     | mean x: 1773112096.0
[2026-03-10 04:56:16] 2026-03-10 03:55:25,588 | INFO     | mean y: 2327670.9014084507
[2026-03-10 04:56:16] 2026-03-10 03:55:25,588 | INFO     | intersect: -13359178.589486856
[2026-03-10 04:56:16] 2026-03-10 03:55:25,588 | INFO     | chi2: 4.712561773097711e-05
[2026-03-10 04:56:16] 2026-03-10 03:55:25,588 | INFO     | current memory leak: 0.01 B/s (using 71 data points, chi2=0.00)
[2026-03-10 04:56:16] 2026-03-10 03:55:25,588 | INFO     | could have reported an average CPU frequency of 3576 MHz (7 samples)
[2026-03-10 04:56:16] 2026-03-10 03:55:25,588 | INFO     | ..............................
[2026-03-10 04:56:16] 2026-03-10 03:55:25,588 | INFO     | . Timing measurements:
[2026-03-10 04:56:16] 2026-03-10 03:55:25,588 | INFO     | . get job = 0 s
[2026-03-10 04:56:16] 2026-03-10 03:55:25,588 | INFO     | . initial setup = 6 s
[2026-03-10 04:56:16] 2026-03-10 03:55:25,588 | INFO     | . payload setup = 5 s
[2026-03-10 04:56:16] 2026-03-10 03:55:25,588 | INFO     | . stage-in = 0 s
[2026-03-10 04:56:16] 2026-03-10 03:55:25,588 | INFO     | . payload execution = 6182 s
[2026-03-10 04:56:16] 2026-03-10 03:55:25,588 | INFO     | . stage-out = 0 s
[2026-03-10 04:56:16] 2026-03-10 03:55:25,588 | INFO     | . log creation = 0 s
[2026-03-10 04:56:16] 2026-03-10 03:55:25,588 | INFO     | ..............................
[2026-03-10 04:56:16] 2026-03-10 03:55:25,636 | INFO     | 
[2026-03-10 04:56:16] 2026-03-10 03:55:25,636 | INFO     | job summary report
[2026-03-10 04:56:16] 2026-03-10 03:55:25,636 | INFO     | --------------------------------------------------
[2026-03-10 04:56:16] 2026-03-10 03:55:25,636 | INFO     | PanDA job id: 7047365804
[2026-03-10 04:56:16] 2026-03-10 03:55:25,636 | INFO     | task id: 48966988
[2026-03-10 04:56:16] 2026-03-10 03:55:25,636 | INFO     | errors: (none)
[2026-03-10 04:56:16] 2026-03-10 03:55:25,636 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 04:56:16] 2026-03-10 03:55:25,636 | INFO     | pilot state: finished 
[2026-03-10 04:56:16] 2026-03-10 03:55:25,636 | INFO     | transexitcode: 0
[2026-03-10 04:56:16] 2026-03-10 03:55:25,636 | INFO     | exeerrorcode: 0
[2026-03-10 04:56:16] 2026-03-10 03:55:25,636 | INFO     | exeerrordiag: 
[2026-03-10 04:56:16] 2026-03-10 03:55:25,636 | INFO     | exitcode: 0
[2026-03-10 04:56:16] 2026-03-10 03:55:25,636 | INFO     | exitmsg: OK
[2026-03-10 04:56:16] 2026-03-10 03:55:25,636 | INFO     | cpuconsumptiontime: 23502 s
[2026-03-10 04:56:16] 2026-03-10 03:55:25,636 | INFO     | nevents: 400
[2026-03-10 04:56:16] 2026-03-10 03:55:25,636 | INFO     | neventsw: 0
[2026-03-10 04:56:16] 2026-03-10 03:55:25,636 | INFO     | pid: 2659614
[2026-03-10 04:56:16] 2026-03-10 03:55:25,636 | INFO     | pgrp: 2659614
[2026-03-10 04:56:16] 2026-03-10 03:55:25,636 | INFO     | corecount: 4
[2026-03-10 04:56:16] 2026-03-10 03:55:25,636 | INFO     | event service: False
[2026-03-10 04:56:16] 2026-03-10 03:55:25,636 | INFO     | sizes: {0: 2280021, 1: 2280311, 11: 2280311, 6191: 2307241, 6192: 2316263, 6194: 2316641}
[2026-03-10 04:56:16] 2026-03-10 03:55:25,636 | INFO     | --------------------------------------------------
[2026-03-10 04:56:16] 2026-03-10 03:55:25,636 | INFO     | 
[2026-03-10 04:56:16] 2026-03-10 03:55:25,637 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot40/slots/10
[2026-03-10 04:56:16] 2026-03-10 03:55:25,654 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 04:56:16] 2026-03-10 03:55:25,654 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 04:56:16] 2026-03-10 03:55:25,655 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 04:56:16] 2026-03-10 03:55:25,655 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 04:56:16] 2026-03-10 03:55:25,655 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 04:56:16] 2026-03-10 03:55:25,655 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 04:56:16] 2026-03-10 03:55:25,655 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 04:56:16] 2026-03-10 03:55:25,655 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 04:56:16] 2026-03-10 03:55:25,655 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 04:56:16] 2026-03-10 03:55:25,655 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 04:56:16] 2026-03-10 03:55:25,655 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 04:56:16] 2026-03-10 03:55:25,655 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 04:56:16] 2026-03-10 03:55:25,655 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 04:56:16] 2026-03-10 03:55:25,655 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 04:56:16] 2026-03-10 03:55:25,655 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 04:56:16] 2026-03-10 03:55:25,655 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 04:56:16] 2026-03-10 03:55:25,655 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 04:56:16] 2026-03-10 03:55:25,655 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 04:56:16] 2026-03-10 03:55:25,655 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 04:56:16] 2026-03-10 03:55:25,655 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 04:56:16] 2026-03-10 03:55:25,655 | INFO     | job 7047365804 has completed (purged errors)
[2026-03-10 04:56:16] 2026-03-10 03:55:25,655 | INFO     | overall cleanup function is called
[2026-03-10 04:56:16] 2026-03-10 03:55:26,662 | INFO     | --- collectZombieJob: --- 10, [2659614]
[2026-03-10 04:56:16] 2026-03-10 03:55:26,663 | INFO     | zombie collector waiting for pid 2659614
[2026-03-10 04:56:16] 2026-03-10 03:55:26,663 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 04:56:16] 2026-03-10 03:55:26,663 | INFO     | collected zombie processes
[2026-03-10 04:56:16] 2026-03-10 03:55:26,663 | INFO     | will attempt to kill all subprocesses of pid=2659614
[2026-03-10 04:56:16] 2026-03-10 03:55:27,125 | INFO     | process IDs to be killed: [2659614] (in reverse order)
[2026-03-10 04:56:16] 2026-03-10 03:55:27,363 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 04:56:16] 2026-03-10 03:55:27,363 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 04:56:16] 2026-03-10 03:55:27,417 | INFO     | did not find any defunct processes belonging to 2659614
[2026-03-10 04:56:16] 2026-03-10 03:55:27,472 | INFO     | did not find any defunct processes belonging to 2659614
[2026-03-10 04:56:16] 2026-03-10 03:55:27,473 | INFO     | ready for new job
[2026-03-10 04:56:16] 2026-03-10 03:55:27,473 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 04:56:16] 2026-03-10 03:55:27,474 | INFO     | **************************************
[2026-03-10 04:56:16] 2026-03-10 03:55:27,474 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 04:56:16] 2026-03-10 03:55:27,474 | INFO     | **************************************
[2026-03-10 04:56:16] 2026-03-10 03:55:27,474 | INFO     | 
[2026-03-10 04:56:16] 2026-03-10 03:55:27,483 | INFO     | architecture information:
[2026-03-10 04:56:16] 2026-03-10 03:55:27,484 | INFO     | executing command: cat /etc/os-release
[2026-03-10 04:56:16] 2026-03-10 03:55:27,497 | INFO     | cat /etc/os-release:
[2026-03-10 04:56:16] NAME="CentOS Linux"
[2026-03-10 04:56:16] VERSION="7 (Core)"
[2026-03-10 04:56:16] ID="centos"
[2026-03-10 04:56:16] ID_LIKE="rhel fedora"
[2026-03-10 04:56:16] VERSION_ID="7"
[2026-03-10 04:56:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 04:56:16] ANSI_COLOR="0;31"
[2026-03-10 04:56:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 04:56:16] HOME_URL="https://www.centos.org/"
[2026-03-10 04:56:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 04:56:16] 
[2026-03-10 04:56:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 04:56:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 04:56:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 04:56:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 04:56:16] 
[2026-03-10 04:56:16] 2026-03-10 03:55:27,497 | INFO     | **************************************
[2026-03-10 04:56:16] 2026-03-10 03:55:27,630 | WARNING  | process 2659614 can no longer be monitored (due to stat problems) - aborting
[2026-03-10 04:56:16] 2026-03-10 03:55:27,915 | INFO     | using path: /var/lib/boinc/var/slot40/slots/10/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 04:56:16] 2026-03-10 03:55:27,999 | INFO     | executing command: df -mP /var/lib/boinc/var/slot40/slots/10
[2026-03-10 04:56:16] 2026-03-10 03:55:28,017 | INFO     | sufficient remaining disk space (21537751040 B)
[2026-03-10 04:56:16] 2026-03-10 03:55:28,017 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 04:56:16] 2026-03-10 03:55:28,017 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 04:56:16] 2026-03-10 03:55:28,017 | INFO     | update_server=False
[2026-03-10 04:56:16] 2026-03-10 03:55:28,017 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 04:56:16] 2026-03-10 03:55:28,378 | INFO     | number of running child processes to parent process 2659614: 1
[2026-03-10 04:56:16] 2026-03-10 03:55:28,378 | INFO     | maximum number of monitored processes: 6
[2026-03-10 04:56:16] 2026-03-10 03:55:28,378 | INFO     | aborting job monitoring since job object (job id=7047365804) has expired
[2026-03-10 04:56:16] 2026-03-10 03:55:28,378 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 04:56:16] 2026-03-10 03:55:28,378 | INFO     | will abort loop
[2026-03-10 04:56:16] 2026-03-10 03:55:28,633 | INFO     | all payload control threads have been joined
[2026-03-10 04:56:16] 2026-03-10 03:55:28,784 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 04:56:16] 2026-03-10 03:55:29,008 | INFO     | all data control threads have been joined
[2026-03-10 04:56:16] 2026-03-10 03:55:29,021 | INFO     | [job] retrieve thread has finished
[2026-03-10 04:56:16] 2026-03-10 03:55:29,097 | INFO     | [job] validate thread has finished
[2026-03-10 04:56:16] 2026-03-10 03:55:29,243 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 04:56:16] 2026-03-10 03:55:29,383 | INFO     | [job] job monitor thread has finished
[2026-03-10 04:56:16] 2026-03-10 03:55:29,507 | INFO     | all job control threads have been joined
[2026-03-10 04:56:16] 2026-03-10 03:55:29,566 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 04:56:16] 2026-03-10 03:55:29,579 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 04:56:16] 2026-03-10 03:55:29,623 | INFO     | [payload] failed_post thread has finished
[2026-03-10 04:56:16] 2026-03-10 03:55:29,638 | INFO     | [payload] control thread has finished
[2026-03-10 04:56:16] 2026-03-10 03:55:29,746 | INFO     | [data] copytool_in thread has finished
[2026-03-10 04:56:16] 2026-03-10 03:55:30,013 | INFO     | [data] control thread has finished
[2026-03-10 04:56:16] 2026-03-10 03:55:30,016 | INFO     | [payload] validate_post thread has finished
[2026-03-10 04:56:16] 2026-03-10 03:55:30,512 | INFO     | [job] control thread has finished
[2026-03-10 04:56:16] 2026-03-10 03:55:30,647 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 04:56:16] 2026-03-10 03:55:30,789 | INFO     | [data] copytool_out thread has finished
[2026-03-10 04:56:16] 2026-03-10 03:55:31,027 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 04:56:16] 2026-03-10 03:55:31,652 | INFO     | [job] queue monitor thread has finished
[2026-03-10 04:56:16] 2026-03-10 03:55:35,033 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 04:56:16] 2026-03-10 03:55:39,031 | INFO     | job.realtimelogging is not enabled
[2026-03-10 04:56:16] 2026-03-10 03:55:40,036 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 04:56:16] 2026-03-10 03:55:57,370 | INFO     | PID=2653838 has CPU usage=9.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 04:56:16] 2026-03-10 03:55:57,370 | INFO     | .. there are 62 such processes running
[2026-03-10 04:56:16] 2026-03-10 03:55:57,371 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 04:56:16] 2026-03-10 03:55:57,371 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 04:56:16] 2026-03-10 03:55:57,371 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 04:56:16] 2026-03-10 03:56:10,329 | INFO     | [monitor] cgroup control has ended
[2026-03-10 04:56:16] 2026-03-10 03:56:11,007 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22904790079296)>', '<ExcThread(monitor, started 22904543901440)>']
[2026-03-10 04:56:16] 2026-03-10 03:56:11,437 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 04:56:16] 2026-03-10 03:56:11,438 | INFO     | [monitor] control thread has ended
[2026-03-10 04:56:16] 2026-03-10 03:56:16,028 | INFO     | all workflow threads have been joined
[2026-03-10 04:56:16] 2026-03-10 03:56:16,028 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 04:56:16] 2026-03-10 03:56:16,028 | INFO     | traces error code: 0
[2026-03-10 04:56:16] 2026-03-10 03:56:16,029 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 04:56:16] 2026-03-10 03:56:16,189 [wrapper] ==== pilot stdout END ====
[2026-03-10 04:56:16] 2026-03-10 03:56:16,191 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 04:56:16] 2026-03-10 03:56:16,193 [wrapper] pilotpid: 2653838
[2026-03-10 04:56:16] 2026-03-10 03:56:16,194 [wrapper] Pilot exit status: 0
[2026-03-10 04:56:16] 2026-03-10 03:56:16,201 [wrapper] pandaids: 7047365804
[2026-03-10 04:56:16] 2026-03-10 03:56:16,307 [wrapper] cleanup supervisor_pilot 3691732 2653839
[2026-03-10 04:56:16] 2026-03-10 03:56:16,309 [wrapper] Test setup, not cleaning
[2026-03-10 04:56:16] 2026-03-10 03:56:16,311 [wrapper] apfmon messages muted
[2026-03-10 04:56:16] 2026-03-10 03:56:16,313 [wrapper] ==== wrapper stdout END ====
[2026-03-10 04:56:16] 2026-03-10 03:56:16,315 [wrapper] ==== wrapper stderr END ====
[2026-03-10 04:56:16]  *** Error codes and diagnostics ***
[2026-03-10 04:56:16]     "exeErrorCode": 0,
[2026-03-10 04:56:16]     "exeErrorDiag": "",
[2026-03-10 04:56:16]     "pilotErrorCode": 0,
[2026-03-10 04:56:16]     "pilotErrorDiag": "",
[2026-03-10 04:56:16]  *** Listing of results directory ***
[2026-03-10 04:56:16] total 404216
[2026-03-10 04:56:16] -rw-r--r--. 1 boinc boinc    584627 Mar  9 14:02 pilot3.tar.gz
[2026-03-10 04:56:16] -rwx------. 1 boinc boinc     36322 Mar  9 15:06 runpilot2-wrapper.sh
[2026-03-10 04:56:16] -rw-r--r--. 1 boinc boinc      5111 Mar  9 15:06 queuedata.json
[2026-03-10 04:56:16] -rw-r--r--. 1 boinc boinc       100 Mar 10 03:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 04:56:16] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 03:11 run_atlas
[2026-03-10 04:56:16] -rw-r--r--. 1 boinc boinc       105 Mar 10 03:11 job.xml
[2026-03-10 04:56:16] -rw-r--r--. 2 boinc boinc 210574380 Mar 10 03:11 EVNT.48966985._000917.pool.root.1
[2026-03-10 04:56:16] -rw-r--r--. 2 boinc boinc     15845 Mar 10 03:11 start_atlas.sh
[2026-03-10 04:56:16] drwxrwx--x. 2 boinc boinc      4096 Mar 10 03:11 shared
[2026-03-10 04:56:16] -rw-r--r--. 2 boinc boinc    597969 Mar 10 03:11 input.tar.gz
[2026-03-10 04:56:16] -rw-r--r--. 1 boinc boinc      6706 Mar 10 03:11 init_data.xml
[2026-03-10 04:56:16] -rw-r--r--. 1 boinc boinc         0 Mar 10 03:11 boinc_lockfile
[2026-03-10 04:56:16] -rw-r--r--. 1 boinc boinc      2592 Mar 10 03:11 pandaJob.out
[2026-03-10 04:56:16] -rw-------. 1 boinc boinc   1002338 Mar 10 03:11 agis_schedconf.cvmfs.json
[2026-03-10 04:56:16] -rw-------. 1 boinc boinc   1511578 Mar 10 03:11 agis_ddmendpoints.agis.ALL.json
[2026-03-10 04:56:16] -rw-------. 1 boinc boinc       444 Mar 10 03:11 workernode_map.json
[2026-03-10 04:56:16] drwx------. 5 boinc boinc      4096 Mar 10 03:12 pilot3
[2026-03-10 04:56:16] -rw-------. 1 boinc boinc 197033247 Mar 10 04:54 HITS.48966988._023556.pool.root.1
[2026-03-10 04:56:16] -rw-r--r--. 1 boinc boinc       529 Mar 10 04:55 boinc_task_state.xml
[2026-03-10 04:56:16] -rw-------. 1 boinc boinc      1043 Mar 10 04:55 memory_monitor_summary.json
[2026-03-10 04:56:16] -rw-------. 1 boinc boinc    288705 Mar 10 04:55 log.48966988._023556.job.log.tgz.1
[2026-03-10 04:56:16] -rw-------. 1 boinc boinc      6353 Mar 10 04:55 heartbeat.json
[2026-03-10 04:56:16] -rw-r--r--. 1 boinc boinc      8192 Mar 10 04:55 boinc_mmap_file
[2026-03-10 04:56:16] -rw-r--r--. 1 boinc boinc        27 Mar 10 04:55 wrapper_checkpoint.txt
[2026-03-10 04:56:16] -rw-------. 1 boinc boinc        95 Mar 10 04:55 pilot_heartbeat.json
[2026-03-10 04:56:16] -rw-------. 1 boinc boinc      5435 Mar 10 04:56 pilotlog.txt
[2026-03-10 04:56:16] -rw-------. 1 boinc boinc    898042 Mar 10 04:56 log.48966988._023556.job.log.1
[2026-03-10 04:56:16] -rw-------. 1 boinc boinc       357 Mar 10 04:56 output.list
[2026-03-10 04:56:16] -rw-r--r--. 1 boinc boinc       620 Mar 10 04:56 runtime_log
[2026-03-10 04:56:16] -rw-------. 1 boinc boinc   1208320 Mar 10 04:56 result.tar.gz
[2026-03-10 04:56:16] -rw-r--r--. 1 boinc boinc      9221 Mar 10 04:56 runtime_log.err
[2026-03-10 04:56:16] -rw-------. 1 boinc boinc       663 Mar 10 04:56 JhjKDmbQqJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmagcLDmx4rpcn.diag
[2026-03-10 04:56:16] -rw-r--r--. 1 boinc boinc     20823 Mar 10 04:56 stderr.txt
[2026-03-10 04:56:16] HITS file was successfully produced:
[2026-03-10 04:56:16] -rw-------. 1 boinc boinc 197033247 Mar 10 04:54 shared/HITS.pool.root.1
[2026-03-10 04:56:16]  *** Contents of shared directory: ***
[2026-03-10 04:56:16] total 399844
[2026-03-10 04:56:16] -rw-r--r--. 2 boinc boinc 210574380 Mar 10 03:11 ATLAS.root_0
[2026-03-10 04:56:16] -rw-r--r--. 2 boinc boinc     15845 Mar 10 03:11 start_atlas.sh
[2026-03-10 04:56:16] -rw-r--r--. 2 boinc boinc    597969 Mar 10 03:11 input.tar.gz
[2026-03-10 04:56:16] -rw-------. 1 boinc boinc 197033247 Mar 10 04:54 HITS.pool.root.1
[2026-03-10 04:56:16] -rw-------. 1 boinc boinc   1208320 Mar 10 04:56 result.tar.gz
04:56:17 (2649282): run_atlas exited; CPU time 23765.887331
04:56:17 (2649282): called boinc_finish(0)

</stderr_txt>
]]>

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