Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:04:22 (1171101): wrapper (7.7.26015): starting
02:04:22 (1171101): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 02:04:22] Arguments: --nthreads 4
[2026-03-10 02:04:22] Threads: 4
[2026-03-10 02:04:22] Checking for CVMFS
[2026-03-10 02:04:22] No cvmfs_config command found, will try listing directly
[2026-03-10 02:04:22] CVMFS is ok
[2026-03-10 02:04:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 02:04:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 02:04:22] Further information can be found at the LHC@home message board.
[2026-03-10 02:04:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 02:04:22] Checking for apptainer binary...
[2026-03-10 02:04:22] which: no apptainer in ((null))
[2026-03-10 02:04:22] apptainer is not installed, using version from CVMFS
[2026-03-10 02:04:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 02:04:22] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/7/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-10 02:04:22] apptainer works
[2026-03-10 02:04:22] Set ATHENA_PROC_NUMBER=4
[2026-03-10 02:04:22] Set ATHENA_CORE_NUMBER=4
[2026-03-10 02:04:22] Starting ATLAS job with PandaID=7047365373
[2026-03-10 02:04:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 03:38:49]  *** The last 200 lines of the pilot log: ***
[2026-03-10 03:38:49]  lfn=log.48966988._023178.job.log.tgz.1
[2026-03-10 03:38:49]  mtime=0
[2026-03-10 03:38:49]  protocol_id=None
[2026-03-10 03:38:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-10 03:38:49]  replicas=None
[2026-03-10 03:38:49]  scope=mc23_13p6TeV
[2026-03-10 03:38:49]  status=None
[2026-03-10 03:38:49]  status_code=0
[2026-03-10 03:38:49]  storage_token=
[2026-03-10 03:38:49]  surl=/var/lib/boinc/var/slot60/slots/7/PanDA_Pilot-7047365373/log.48966988._023178.job.log.tgz.1
[2026-03-10 03:38:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/30/41/log.48966988._023178.job.log.tgz.1
[2026-03-10 03:38:49]  workdir=None
[2026-03-10 03:38:49] ]
[2026-03-10 03:38:49] 2026-03-10 02:37:48,350 | INFO     | transferring file log.48966988._023178.job.log.tgz.1 from /var/lib/boinc/var/slot60/slots/7/PanDA_Pilot-7047365373/log.48966988._023178.job.log.tgz.1 to /var/lib/b
[2026-03-10 03:38:49] 2026-03-10 02:37:48,351 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot60/slots/7/PanDA_Pilot-7047365373/log.48966988._023178.job.log.tgz.1 /var/lib/boinc/var/slot60/slots/7/lo
[2026-03-10 03:38:49] 2026-03-10 02:37:48,365 | INFO     | adding to output.list: log.48966988._023178.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/30/41/log.48966988._023178.job.log.tg
[2026-03-10 03:38:49] 2026-03-10 02:37:48,366 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 03:38:49] 2026-03-10 02:37:48,366 | INFO     | summary of transferred files:
[2026-03-10 03:38:49] 2026-03-10 02:37:48,366 | INFO     |  -- lfn=log.48966988._023178.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 03:38:49] 2026-03-10 02:37:48,366 | INFO     | stage-out finished correctly
[2026-03-10 03:38:49] 2026-03-10 02:37:49,837 | INFO     | time since job start (5596s) is within the limit (349056.0s)
[2026-03-10 03:38:49] 2026-03-10 02:37:50,087 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 03:38:49] 2026-03-10 02:37:51,326 | INFO     | PID=1175667 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 03:38:49] 2026-03-10 02:37:51,326 | INFO     | .. there are 58 such processes running
[2026-03-10 03:38:49] 2026-03-10 02:37:51,788 | WARNING  | process 1181771 can no longer be monitored (due to stat problems) - aborting
[2026-03-10 03:38:49] 2026-03-10 02:37:51,788 | INFO     | using path: /var/lib/boinc/var/slot60/slots/7/PanDA_Pilot-7047365373/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 03:38:49] 2026-03-10 02:37:52,207 | INFO     | number of running child processes to parent process 1181771: 1
[2026-03-10 03:38:49] 2026-03-10 02:37:52,208 | INFO     | maximum number of monitored processes: 6
[2026-03-10 03:38:49] 2026-03-10 02:37:52,326 | INFO     | time since job start (5599s) is within the limit (349056.0s)
[2026-03-10 03:38:49] 2026-03-10 02:37:52,773 | INFO     | job 7047365373 has state=finished
[2026-03-10 03:38:49] 2026-03-10 02:37:52,773 | INFO     | preparing for final server update for job 7047365373 in state='finished'
[2026-03-10 03:38:49] 2026-03-10 02:37:52,774 | INFO     | reading metadata from: /var/lib/boinc/var/slot60/slots/7/PanDA_Pilot-7047365373/jobReport.json
[2026-03-10 03:38:49] 2026-03-10 02:37:52,775 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot60/slots/7/workernode_map.json
[2026-03-10 03:38:49] 2026-03-10 02:37:52,775 | INFO     | this job has now completed (state=finished)
[2026-03-10 03:38:49] 2026-03-10 02:37:52,775 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 03:38:49] 2026-03-10 02:37:52,776 | INFO     | log transfer has been attempted: DONE
[2026-03-10 03:38:49] 2026-03-10 02:37:52,776 | INFO     | job 7047365373 has finished - writing final server update
[2026-03-10 03:38:49] 2026-03-10 02:37:52,776 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1520693/.job.ad'
[2026-03-10 03:38:49] 2026-03-10 02:37:52,776 | INFO     | total number of processed events: 400 (read)
[2026-03-10 03:38:49] 2026-03-10 02:37:52,795 | INFO     | using path: /var/lib/boinc/var/slot60/slots/7/PanDA_Pilot-7047365373/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 03:38:49] 2026-03-10 02:37:52,795 | INFO     | extracted standard info from prmon json
[2026-03-10 03:38:49] 2026-03-10 02:37:52,795 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 03:38:49] 2026-03-10 02:37:52,795 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 03:38:49] 2026-03-10 02:37:52,795 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 03:38:49] 2026-03-10 02:37:52,795 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 03:38:49] 2026-03-10 02:37:52,796 | INFO     | fitting pss+swap vs Time
[2026-03-10 03:38:49] 2026-03-10 02:37:52,797 | INFO     | sum of square deviations: 190403570.0
[2026-03-10 03:38:49] 2026-03-10 02:37:52,797 | INFO     | sum of deviations: 1057538577.9999998
[2026-03-10 03:38:49] 2026-03-10 02:37:52,797 | INFO     | mean x: 1773107560.0
[2026-03-10 03:38:49] 2026-03-10 02:37:52,797 | INFO     | mean y: 2326451.6
[2026-03-10 03:38:49] 2026-03-10 02:37:52,797 | INFO     | intersect: -9845858893.052147
[2026-03-10 03:38:49] 2026-03-10 02:37:52,797 | INFO     | chi2: 0.000548126073812975
[2026-03-10 03:38:49] 2026-03-10 02:37:52,797 | INFO     | current memory leak: 5.55 B/s (using 85 data points, chi2=0.00)
[2026-03-10 03:38:49] 2026-03-10 02:37:52,797 | INFO     | could have reported an average CPU frequency of 3628 MHz (7 samples)
[2026-03-10 03:38:49] 2026-03-10 02:37:52,797 | INFO     | ..............................
[2026-03-10 03:38:49] 2026-03-10 02:37:52,797 | INFO     | . Timing measurements:
[2026-03-10 03:38:49] 2026-03-10 02:37:52,797 | INFO     | . get job = 0 s
[2026-03-10 03:38:49] 2026-03-10 02:37:52,797 | INFO     | . initial setup = 4 s
[2026-03-10 03:38:49] 2026-03-10 02:37:52,797 | INFO     | . payload setup = 4 s
[2026-03-10 03:38:49] 2026-03-10 02:37:52,797 | INFO     | . stage-in = 0 s
[2026-03-10 03:38:49] 2026-03-10 02:37:52,797 | INFO     | . payload execution = 5575 s
[2026-03-10 03:38:49] 2026-03-10 02:37:52,797 | INFO     | . stage-out = 0 s
[2026-03-10 03:38:49] 2026-03-10 02:37:52,798 | INFO     | . log creation = 0 s
[2026-03-10 03:38:49] 2026-03-10 02:37:52,798 | INFO     | ..............................
[2026-03-10 03:38:49] 2026-03-10 02:37:53,279 | INFO     | 
[2026-03-10 03:38:49] 2026-03-10 02:37:53,279 | INFO     | job summary report
[2026-03-10 03:38:49] 2026-03-10 02:37:53,279 | INFO     | --------------------------------------------------
[2026-03-10 03:38:49] 2026-03-10 02:37:53,279 | INFO     | PanDA job id: 7047365373
[2026-03-10 03:38:49] 2026-03-10 02:37:53,279 | INFO     | task id: 48966988
[2026-03-10 03:38:49] 2026-03-10 02:37:53,279 | INFO     | errors: (none)
[2026-03-10 03:38:49] 2026-03-10 02:37:53,279 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 03:38:49] 2026-03-10 02:37:53,279 | INFO     | pilot state: finished 
[2026-03-10 03:38:49] 2026-03-10 02:37:53,279 | INFO     | transexitcode: 0
[2026-03-10 03:38:49] 2026-03-10 02:37:53,279 | INFO     | exeerrorcode: 0
[2026-03-10 03:38:49] 2026-03-10 02:37:53,279 | INFO     | exeerrordiag: 
[2026-03-10 03:38:49] 2026-03-10 02:37:53,279 | INFO     | exitcode: 0
[2026-03-10 03:38:49] 2026-03-10 02:37:53,279 | INFO     | exitmsg: OK
[2026-03-10 03:38:49] 2026-03-10 02:37:53,279 | INFO     | cpuconsumptiontime: 21514 s
[2026-03-10 03:38:49] 2026-03-10 02:37:53,280 | INFO     | nevents: 400
[2026-03-10 03:38:49] 2026-03-10 02:37:53,280 | INFO     | neventsw: 0
[2026-03-10 03:38:49] 2026-03-10 02:37:53,280 | INFO     | pid: 1181771
[2026-03-10 03:38:49] 2026-03-10 02:37:53,280 | INFO     | pgrp: 1181771
[2026-03-10 03:38:49] 2026-03-10 02:37:53,280 | INFO     | corecount: 4
[2026-03-10 03:38:49] 2026-03-10 02:37:53,280 | INFO     | event service: False
[2026-03-10 03:38:49] 2026-03-10 02:37:53,280 | INFO     | sizes: {0: 2280282, 11: 2280282, 5583: 2315979, 5585: 2315979, 5588: 2316173}
[2026-03-10 03:38:49] 2026-03-10 02:37:53,280 | INFO     | --------------------------------------------------
[2026-03-10 03:38:49] 2026-03-10 02:37:53,280 | INFO     | 
[2026-03-10 03:38:49] 2026-03-10 02:37:53,280 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/7
[2026-03-10 03:38:49] 2026-03-10 02:37:53,304 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 03:38:49] 2026-03-10 02:37:53,304 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 03:38:49] 2026-03-10 02:37:53,304 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 03:38:49] 2026-03-10 02:37:53,304 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 03:38:49] 2026-03-10 02:37:53,304 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 03:38:49] 2026-03-10 02:37:53,304 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 03:38:49] 2026-03-10 02:37:53,304 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 03:38:49] 2026-03-10 02:37:53,304 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 03:38:49] 2026-03-10 02:37:53,304 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 03:38:49] 2026-03-10 02:37:53,304 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 03:38:49] 2026-03-10 02:37:53,305 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 03:38:49] 2026-03-10 02:37:53,305 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 03:38:49] 2026-03-10 02:37:53,305 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 03:38:49] 2026-03-10 02:37:53,305 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 03:38:49] 2026-03-10 02:37:53,305 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 03:38:49] 2026-03-10 02:37:53,305 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 03:38:49] 2026-03-10 02:37:53,305 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 03:38:49] 2026-03-10 02:37:53,305 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 03:38:49] 2026-03-10 02:37:53,305 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 03:38:49] 2026-03-10 02:37:53,305 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 03:38:49] 2026-03-10 02:37:53,305 | INFO     | job 7047365373 has completed (purged errors)
[2026-03-10 03:38:49] 2026-03-10 02:37:53,305 | INFO     | overall cleanup function is called
[2026-03-10 03:38:49] 2026-03-10 02:37:54,311 | INFO     | --- collectZombieJob: --- 10, [1181771]
[2026-03-10 03:38:49] 2026-03-10 02:37:54,311 | INFO     | zombie collector waiting for pid 1181771
[2026-03-10 03:38:49] 2026-03-10 02:37:54,311 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 03:38:49] 2026-03-10 02:37:54,311 | INFO     | collected zombie processes
[2026-03-10 03:38:49] 2026-03-10 02:37:54,311 | INFO     | will attempt to kill all subprocesses of pid=1181771
[2026-03-10 03:38:49] 2026-03-10 02:37:54,699 | INFO     | process IDs to be killed: [1181771] (in reverse order)
[2026-03-10 03:38:49] 2026-03-10 02:37:54,881 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 03:38:49] 2026-03-10 02:37:54,881 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 03:38:49] 2026-03-10 02:37:54,904 | INFO     | did not find any defunct processes belonging to 1181771
[2026-03-10 03:38:49] 2026-03-10 02:37:54,924 | INFO     | did not find any defunct processes belonging to 1181771
[2026-03-10 03:38:49] 2026-03-10 02:37:54,924 | INFO     | ready for new job
[2026-03-10 03:38:49] 2026-03-10 02:37:54,925 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 03:38:49] 2026-03-10 02:37:54,926 | INFO     | **************************************
[2026-03-10 03:38:49] 2026-03-10 02:37:54,926 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 03:38:49] 2026-03-10 02:37:54,926 | INFO     | **************************************
[2026-03-10 03:38:49] 2026-03-10 02:37:54,926 | INFO     | 
[2026-03-10 03:38:49] 2026-03-10 02:37:54,932 | INFO     | architecture information:
[2026-03-10 03:38:49] 2026-03-10 02:37:54,933 | INFO     | executing command: cat /etc/os-release
[2026-03-10 03:38:49] 2026-03-10 02:37:54,949 | INFO     | cat /etc/os-release:
[2026-03-10 03:38:49] NAME="CentOS Linux"
[2026-03-10 03:38:49] VERSION="7 (Core)"
[2026-03-10 03:38:49] ID="centos"
[2026-03-10 03:38:49] ID_LIKE="rhel fedora"
[2026-03-10 03:38:49] VERSION_ID="7"
[2026-03-10 03:38:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 03:38:49] ANSI_COLOR="0;31"
[2026-03-10 03:38:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 03:38:49] HOME_URL="https://www.centos.org/"
[2026-03-10 03:38:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 03:38:49] 
[2026-03-10 03:38:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 03:38:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 03:38:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 03:38:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 03:38:49] 
[2026-03-10 03:38:49] 2026-03-10 02:37:54,949 | INFO     | **************************************
[2026-03-10 03:38:49] 2026-03-10 02:37:55,451 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/7
[2026-03-10 03:38:49] 2026-03-10 02:37:55,465 | INFO     | sufficient remaining disk space (20085473280 B)
[2026-03-10 03:38:49] 2026-03-10 02:37:55,465 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 03:38:49] 2026-03-10 02:37:55,465 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 03:38:49] 2026-03-10 02:37:55,465 | INFO     | update_server=False
[2026-03-10 03:38:49] 2026-03-10 02:37:55,465 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 03:38:49] 2026-03-10 02:37:55,715 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 03:38:49] 2026-03-10 02:37:55,715 | INFO     | aborting loop
[2026-03-10 03:38:49] 2026-03-10 02:37:56,121 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 03:38:49] 2026-03-10 02:37:56,409 | INFO     | all data control threads have been joined
[2026-03-10 03:38:49] 2026-03-10 02:37:56,425 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 03:38:49] 2026-03-10 02:37:56,471 | INFO     | [job] retrieve thread has finished
[2026-03-10 03:38:49] 2026-03-10 02:37:56,543 | INFO     | all job control threads have been joined
[2026-03-10 03:38:49] 2026-03-10 02:37:56,546 | INFO     | all payload control threads have been joined
[2026-03-10 03:38:49] 2026-03-10 02:37:56,720 | INFO     | [job] job monitor thread has finished
[2026-03-10 03:38:49] 2026-03-10 02:37:56,870 | INFO     | [payload] validate_post thread has finished
[2026-03-10 03:38:49] 2026-03-10 02:37:57,104 | INFO     | [payload] failed_post thread has finished
[2026-03-10 03:38:49] 2026-03-10 02:37:57,414 | INFO     | [data] control thread has finished
[2026-03-10 03:38:49] 2026-03-10 02:37:57,436 | INFO     | [job] validate thread has finished
[2026-03-10 03:38:49] 2026-03-10 02:37:57,473 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 03:38:49] 2026-03-10 02:37:57,548 | INFO     | [job] control thread has finished
[2026-03-10 03:38:49] 2026-03-10 02:37:57,551 | INFO     | [payload] control thread has finished
[2026-03-10 03:38:49] 2026-03-10 02:37:57,669 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 03:38:49] 2026-03-10 02:37:57,822 | INFO     | [data] copytool_in thread has finished
[2026-03-10 03:38:49] 2026-03-10 02:37:57,828 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 03:38:49] 2026-03-10 02:37:57,851 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 03:38:49] 2026-03-10 02:37:58,430 | INFO     | [data] copytool_out thread has finished
[2026-03-10 03:38:49] 2026-03-10 02:37:58,856 | INFO     | [job] queue monitor thread has finished
[2026-03-10 03:38:49] 2026-03-10 02:38:00,126 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 03:38:49] 2026-03-10 02:38:05,663 | INFO     | job.realtimelogging is not enabled
[2026-03-10 03:38:49] 2026-03-10 02:38:06,668 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 03:38:49] 2026-03-10 02:38:25,852 | INFO     | PID=1175667 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 03:38:49] 2026-03-10 02:38:25,852 | INFO     | .. there are 58 such processes running
[2026-03-10 03:38:49] 2026-03-10 02:38:25,852 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 03:38:49] 2026-03-10 02:38:25,852 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 03:38:49] 2026-03-10 02:38:25,852 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 03:38:49] 2026-03-10 02:38:42,617 | INFO     | [monitor] cgroup control has ended
[2026-03-10 03:38:49] 2026-03-10 02:38:43,853 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23447431870272)>', '<ExcThread(monitor, started 23447188276992)>']
[2026-03-10 03:38:49] 2026-03-10 02:38:43,933 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 03:38:49] 2026-03-10 02:38:43,933 | INFO     | [monitor] control thread has ended
[2026-03-10 03:38:49] 2026-03-10 02:38:48,856 | INFO     | all workflow threads have been joined
[2026-03-10 03:38:49] 2026-03-10 02:38:48,857 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 03:38:49] 2026-03-10 02:38:48,857 | INFO     | traces error code: 0
[2026-03-10 03:38:49] 2026-03-10 02:38:48,857 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 03:38:49] 2026-03-10 02:38:48,973 [wrapper] ==== pilot stdout END ====
[2026-03-10 03:38:49] 2026-03-10 02:38:48,976 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 03:38:49] 2026-03-10 02:38:48,978 [wrapper] pilotpid: 1175667
[2026-03-10 03:38:49] 2026-03-10 02:38:48,980 [wrapper] Pilot exit status: 0
[2026-03-10 03:38:49] 2026-03-10 02:38:48,989 [wrapper] pandaids: 7047365373
[2026-03-10 03:38:49] 2026-03-10 02:38:49,090 [wrapper] cleanup supervisor_pilot 2198650 1175668
[2026-03-10 03:38:49] 2026-03-10 02:38:49,092 [wrapper] Test setup, not cleaning
[2026-03-10 03:38:49] 2026-03-10 02:38:49,094 [wrapper] apfmon messages muted
[2026-03-10 03:38:49] 2026-03-10 02:38:49,095 [wrapper] ==== wrapper stdout END ====
[2026-03-10 03:38:49] 2026-03-10 02:38:49,096 [wrapper] ==== wrapper stderr END ====
[2026-03-10 03:38:49]  *** Error codes and diagnostics ***
[2026-03-10 03:38:49]     "exeErrorCode": 0,
[2026-03-10 03:38:49]     "exeErrorDiag": "",
[2026-03-10 03:38:49]     "pilotErrorCode": 0,
[2026-03-10 03:38:49]     "pilotErrorDiag": "",
[2026-03-10 03:38:49]  *** Listing of results directory ***
[2026-03-10 03:38:49] total 400972
[2026-03-10 03:38:49] -rw-r--r--. 1 boinc boinc    584627 Mar  9 14:02 pilot3.tar.gz
[2026-03-10 03:38:49] -rwx------. 1 boinc boinc     36322 Mar  9 15:06 runpilot2-wrapper.sh
[2026-03-10 03:38:49] -rw-r--r--. 1 boinc boinc      5111 Mar  9 15:06 queuedata.json
[2026-03-10 03:38:49] -rw-r--r--. 1 boinc boinc       100 Mar 10 02:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 03:38:49] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 02:04 run_atlas
[2026-03-10 03:38:49] -rw-r--r--. 1 boinc boinc       105 Mar 10 02:04 job.xml
[2026-03-10 03:38:49] -rw-r--r--. 1 boinc boinc      6705 Mar 10 02:04 init_data.xml
[2026-03-10 03:38:49] -rw-r--r--. 2 boinc boinc 210244722 Mar 10 02:04 EVNT.48966985._000902.pool.root.1
[2026-03-10 03:38:49] -rw-r--r--. 2 boinc boinc     15845 Mar 10 02:04 start_atlas.sh
[2026-03-10 03:38:49] drwxrwx--x. 2 boinc boinc      4096 Mar 10 02:04 shared
[2026-03-10 03:38:49] -rw-r--r--. 2 boinc boinc    597966 Mar 10 02:04 input.tar.gz
[2026-03-10 03:38:49] -rw-r--r--. 1 boinc boinc         0 Mar 10 02:04 boinc_lockfile
[2026-03-10 03:38:49] -rw-r--r--. 1 boinc boinc      2592 Mar 10 02:04 pandaJob.out
[2026-03-10 03:38:49] -rw-------. 1 boinc boinc   1002346 Mar 10 02:04 agis_schedconf.cvmfs.json
[2026-03-10 03:38:49] -rw-------. 1 boinc boinc   1511578 Mar 10 02:04 agis_ddmendpoints.agis.ALL.json
[2026-03-10 03:38:49] -rw-------. 1 boinc boinc       443 Mar 10 02:04 workernode_map.json
[2026-03-10 03:38:49] drwx------. 5 boinc boinc      4096 Mar 10 02:04 pilot3
[2026-03-10 03:38:49] -rw-------. 1 boinc boinc 194221477 Mar 10 03:37 HITS.48966988._023178.pool.root.1
[2026-03-10 03:38:49] -rw-------. 1 boinc boinc        95 Mar 10 03:37 pilot_heartbeat.json
[2026-03-10 03:38:49] -rw-------. 1 boinc boinc      1044 Mar 10 03:37 memory_monitor_summary.json
[2026-03-10 03:38:49] -rw-------. 1 boinc boinc    275833 Mar 10 03:37 log.48966988._023178.job.log.tgz.1
[2026-03-10 03:38:49] -rw-r--r--. 1 boinc boinc       530 Mar 10 03:37 boinc_task_state.xml
[2026-03-10 03:38:49] -rw-------. 1 boinc boinc      6351 Mar 10 03:37 heartbeat.json
[2026-03-10 03:38:49] -rw-r--r--. 1 boinc boinc      8192 Mar 10 03:38 boinc_mmap_file
[2026-03-10 03:38:49] -rw-r--r--. 1 boinc boinc        27 Mar 10 03:38 wrapper_checkpoint.txt
[2026-03-10 03:38:49] -rw-------. 1 boinc boinc      4901 Mar 10 03:38 pilotlog.txt
[2026-03-10 03:38:49] -rw-------. 1 boinc boinc    818530 Mar 10 03:38 log.48966988._023178.job.log.1
[2026-03-10 03:38:49] -rw-------. 1 boinc boinc       357 Mar 10 03:38 output.list
[2026-03-10 03:38:49] -rw-r--r--. 1 boinc boinc       620 Mar 10 03:38 runtime_log
[2026-03-10 03:38:49] -rw-------. 1 boinc boinc   1116160 Mar 10 03:38 result.tar.gz
[2026-03-10 03:38:49] -rw-------. 1 boinc boinc       662 Mar 10 03:38 sZwLDmPQqJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmXfcLDmxdAqGo.diag
[2026-03-10 03:38:49] -rw-r--r--. 1 boinc boinc      9204 Mar 10 03:38 runtime_log.err
[2026-03-10 03:38:49] -rw-r--r--. 1 boinc boinc     20537 Mar 10 03:38 stderr.txt
[2026-03-10 03:38:49] HITS file was successfully produced:
[2026-03-10 03:38:49] -rw-------. 1 boinc boinc 194221477 Mar 10 03:37 shared/HITS.pool.root.1
[2026-03-10 03:38:49]  *** Contents of shared directory: ***
[2026-03-10 03:38:49] total 396692
[2026-03-10 03:38:49] -rw-r--r--. 2 boinc boinc 210244722 Mar 10 02:04 ATLAS.root_0
[2026-03-10 03:38:49] -rw-r--r--. 2 boinc boinc     15845 Mar 10 02:04 start_atlas.sh
[2026-03-10 03:38:49] -rw-r--r--. 2 boinc boinc    597966 Mar 10 02:04 input.tar.gz
[2026-03-10 03:38:49] -rw-------. 1 boinc boinc 194221477 Mar 10 03:37 HITS.pool.root.1
[2026-03-10 03:38:49] -rw-------. 1 boinc boinc   1116160 Mar 10 03:38 result.tar.gz
03:38:51 (1171101): run_atlas exited; CPU time 21734.289618
03:38:51 (1171101): called boinc_finish(0)

</stderr_txt>
]]>

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