Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
10:11:58 (3166560): wrapper (7.7.26015): starting
10:11:58 (3166560): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 10:11:58] Arguments: --nthreads 4
[2026-03-09 10:11:58] Threads: 4
[2026-03-09 10:11:58] Checking for CVMFS
[2026-03-09 10:11:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 10:11:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 10:11:59] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 10:11:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 10:11:59] 2.13.3.0 1437033 4567 53536 157078 3 50 3231799 4096000 2748 130560 0 3435726 99.991 158887 1050 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-09 10:11:59] CVMFS is ok
[2026-03-09 10:11:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 10:11:59] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-09 10:11:59] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-09 10:11:59] Further information can be found at the LHC@home message board.
[2026-03-09 10:11:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 10:11:59] Checking for apptainer binary...
[2026-03-09 10:11:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 10:11:59] Running /usr/bin/apptainer --version
[2026-03-09 10:11:59] apptainer version 1.4.5
[2026-03-09 10:11:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 10:11:59] T5810-Ubuntu
[2026-03-09 10:11:59] apptainer works
[2026-03-09 10:11:59] Set ATHENA_PROC_NUMBER=4
[2026-03-09 10:11:59] Set ATHENA_CORE_NUMBER=4
[2026-03-09 10:11:59] Starting ATLAS job with PandaID=7040731588
[2026-03-09 10:11:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/20 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 13:19:42]  *** The last 200 lines of the pilot log: ***
[2026-03-09 13:19:42] 2026-03-09 17:18:36,999 | INFO     | monitor loop #829: job 0:7040731588 is in state 'finished'
[2026-03-09 13:19:42] 2026-03-09 17:18:36,999 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-09 13:19:42] 2026-03-09 17:18:38,244 | INFO     | job 7040731588 has state=finished
[2026-03-09 13:19:42] 2026-03-09 17:18:38,244 | INFO     | preparing for final server update for job 7040731588 in state='finished'
[2026-03-09 13:19:42] 2026-03-09 17:18:38,245 | INFO     | reading metadata from: /home/whitlerd/Desktop/BOINC/slots/20/PanDA_Pilot-7040731588/jobReport.json
[2026-03-09 13:19:42] 2026-03-09 17:18:38,247 | INFO     | added worker_node to metadata from /home/whitlerd/Desktop/BOINC/slots/20/workernode_map.json
[2026-03-09 13:19:42] 2026-03-09 17:18:38,248 | INFO     | this job has now completed (state=finished)
[2026-03-09 13:19:42] 2026-03-09 17:18:38,248 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 13:19:42] 2026-03-09 17:18:38,248 | INFO     | log transfer has been attempted: DONE
[2026-03-09 13:19:42] 2026-03-09 17:18:38,248 | INFO     | job 7040731588 has finished - writing final server update
[2026-03-09 13:19:42] 2026-03-09 17:18:38,248 | INFO     | total number of processed events: 400 (read)
[2026-03-09 13:19:42] 2026-03-09 17:18:38,256 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/20/PanDA_Pilot-7040731588/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 13:19:42] 2026-03-09 17:18:38,257 | INFO     | extracted standard info from prmon json
[2026-03-09 13:19:42] 2026-03-09 17:18:38,257 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 13:19:42] 2026-03-09 17:18:38,257 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 13:19:42] 2026-03-09 17:18:38,258 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 13:19:42] 2026-03-09 17:18:38,258 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 13:19:42] 2026-03-09 17:18:38,262 | INFO     | fitting pss+swap vs Time
[2026-03-09 13:19:42] 2026-03-09 17:18:38,262 | INFO     | sum of square deviations: 1900284932.0
[2026-03-09 13:19:42] 2026-03-09 17:18:38,263 | INFO     | sum of deviations: 3880007846.0
[2026-03-09 13:19:42] 2026-03-09 17:18:38,264 | INFO     | mean x: 1773071113.0
[2026-03-09 13:19:42] 2026-03-09 17:18:38,264 | INFO     | mean y: 2322234.06010929
[2026-03-09 13:19:42] 2026-03-09 17:18:38,264 | INFO     | intersect: -3617940029.8286166
[2026-03-09 13:19:42] 2026-03-09 17:18:38,264 | INFO     | chi2: 1.3737145198941452
[2026-03-09 13:19:42] 2026-03-09 17:18:38,265 | INFO     | sum of square deviations: 1748737904.5
[2026-03-09 13:19:42] 2026-03-09 17:18:38,266 | INFO     | sum of deviations: 3986522111.4999967
[2026-03-09 13:19:42] 2026-03-09 17:18:38,266 | INFO     | mean x: 1773070960.5
[2026-03-09 13:19:42] 2026-03-09 17:18:38,266 | INFO     | mean y: 2322341.2640449437
[2026-03-09 13:19:42] 2026-03-09 17:18:38,266 | INFO     | intersect: -4039670784.8086605
[2026-03-09 13:19:42] 2026-03-09 17:18:38,267 | INFO     | chi2: 1.374466529681705
[2026-03-09 13:19:42] 2026-03-09 17:18:38,267 | INFO     | current chi2=1.374466529681705 (change=-0.05474279966245719 %)
[2026-03-09 13:19:42] 2026-03-09 17:18:38,267 | INFO     | right removable region: 177
[2026-03-09 13:19:42] 2026-03-09 17:18:38,267 | INFO     | sum of square deviations: 1748737904.5
[2026-03-09 13:19:42] 2026-03-09 17:18:38,268 | INFO     | sum of deviations: -19657636801.0
[2026-03-09 13:19:42] 2026-03-09 17:18:38,269 | INFO     | mean x: 1773071265.5
[2026-03-09 13:19:42] 2026-03-09 17:18:38,269 | INFO     | mean y: 2345609.9325842694
[2026-03-09 13:19:42] 2026-03-09 17:18:38,269 | INFO     | intersect: 19933514751.85956
[2026-03-09 13:19:42] 2026-03-09 17:18:38,269 | INFO     | chi2: 0.033697942120432096
[2026-03-09 13:19:42] 2026-03-09 17:18:38,269 | INFO     | current chi2=0.033697942120432096 (change=97.54694722721364 %)
[2026-03-09 13:19:42] 2026-03-09 17:18:38,270 | INFO     | sum of square deviations: 1605470102.0
[2026-03-09 13:19:42] 2026-03-09 17:18:38,271 | INFO     | sum of deviations: -17980363782.0
[2026-03-09 13:19:42] 2026-03-09 17:18:38,271 | INFO     | mean x: 1773071418.0
[2026-03-09 13:19:42] 2026-03-09 17:18:38,271 | INFO     | mean y: 2343818.87283237
[2026-03-09 13:19:42] 2026-03-09 17:18:38,271 | INFO     | intersect: 19859748243.528126
[2026-03-09 13:19:42] 2026-03-09 17:18:38,272 | INFO     | chi2: 0.03354951517047358
[2026-03-09 13:19:42] 2026-03-09 17:18:38,272 | INFO     | current chi2=0.03354951517047358 (change=0.4404629500165202 %)
[2026-03-09 13:19:42] 2026-03-09 17:18:38,272 | INFO     | left removable region: 20
[2026-03-09 13:19:42] 2026-03-09 17:18:38,272 | INFO     | sum of square deviations: 1199940638.0
[2026-03-09 13:19:42] 2026-03-09 17:18:38,273 | INFO     | sum of deviations: -12361932186.000002
[2026-03-09 13:19:42] 2026-03-09 17:18:38,273 | INFO     | mean x: 1773071540.0
[2026-03-09 13:19:42] 2026-03-09 17:18:38,274 | INFO     | mean y: 2338696.668789809
[2026-03-09 13:19:42] 2026-03-09 17:18:38,274 | INFO     | intersect: 18268734086.810238
[2026-03-09 13:19:42] 2026-03-09 17:18:38,274 | INFO     | chi2: 0.028974196233291793
[2026-03-09 13:19:42] 2026-03-09 17:18:38,274 | INFO     | current memory leak: -10.30 B/s (using 157 data points, chi2=0.03)
[2026-03-09 13:19:42] 2026-03-09 17:18:38,275 | INFO     | could have reported an average CPU frequency of 2510 MHz (10 samples)
[2026-03-09 13:19:42] 2026-03-09 17:18:38,275 | INFO     | ..............................
[2026-03-09 13:19:42] 2026-03-09 17:18:38,275 | INFO     | . Timing measurements:
[2026-03-09 13:19:42] 2026-03-09 17:18:38,275 | INFO     | . get job = 0 s
[2026-03-09 13:19:42] 2026-03-09 17:18:38,275 | INFO     | . initial setup = 7 s
[2026-03-09 13:19:42] 2026-03-09 17:18:38,275 | INFO     | . payload setup = 6 s
[2026-03-09 13:19:42] 2026-03-09 17:18:38,275 | INFO     | . stage-in = 0 s
[2026-03-09 13:19:42] 2026-03-09 17:18:38,276 | INFO     | . payload execution = 11148 s
[2026-03-09 13:19:42] 2026-03-09 17:18:38,276 | INFO     | . stage-out = 2 s
[2026-03-09 13:19:42] 2026-03-09 17:18:38,276 | INFO     | . log creation = 0 s
[2026-03-09 13:19:42] 2026-03-09 17:18:38,276 | INFO     | ..............................
[2026-03-09 13:19:42] 2026-03-09 17:18:38,389 | INFO     | 
[2026-03-09 13:19:42] 2026-03-09 17:18:38,389 | INFO     | job summary report
[2026-03-09 13:19:42] 2026-03-09 17:18:38,389 | INFO     | --------------------------------------------------
[2026-03-09 13:19:42] 2026-03-09 17:18:38,389 | INFO     | PanDA job id: 7040731588
[2026-03-09 13:19:42] 2026-03-09 17:18:38,390 | INFO     | task id: 48955010
[2026-03-09 13:19:42] 2026-03-09 17:18:38,390 | INFO     | errors: (none)
[2026-03-09 13:19:42] 2026-03-09 17:18:38,390 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 13:19:42] 2026-03-09 17:18:38,390 | INFO     | pilot state: finished 
[2026-03-09 13:19:42] 2026-03-09 17:18:38,390 | INFO     | transexitcode: 0
[2026-03-09 13:19:42] 2026-03-09 17:18:38,390 | INFO     | exeerrorcode: 0
[2026-03-09 13:19:42] 2026-03-09 17:18:38,390 | INFO     | exeerrordiag: 
[2026-03-09 13:19:42] 2026-03-09 17:18:38,390 | INFO     | exitcode: 0
[2026-03-09 13:19:42] 2026-03-09 17:18:38,391 | INFO     | exitmsg: OK
[2026-03-09 13:19:42] 2026-03-09 17:18:38,391 | INFO     | cpuconsumptiontime: 43444 s
[2026-03-09 13:19:42] 2026-03-09 17:18:38,391 | INFO     | nevents: 400
[2026-03-09 13:19:42] 2026-03-09 17:18:38,391 | INFO     | neventsw: 0
[2026-03-09 13:19:42] 2026-03-09 17:18:38,391 | INFO     | pid: 3175521
[2026-03-09 13:19:42] 2026-03-09 17:18:38,391 | INFO     | pgrp: 3175521
[2026-03-09 13:19:42] 2026-03-09 17:18:38,391 | INFO     | corecount: 4
[2026-03-09 13:19:42] 2026-03-09 17:18:38,391 | INFO     | event service: False
[2026-03-09 13:19:42] 2026-03-09 17:18:38,391 | INFO     | sizes: {0: 2279986, 1: 2280192, 11: 2280220, 11158: 2309405, 11161: 2318433, 11164: 2318489, 11167: 2318811}
[2026-03-09 13:19:42] 2026-03-09 17:18:38,392 | INFO     | --------------------------------------------------
[2026-03-09 13:19:42] 2026-03-09 17:18:38,392 | INFO     | 
[2026-03-09 13:19:42] 2026-03-09 17:18:38,392 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/20
[2026-03-09 13:19:42] 2026-03-09 17:18:38,419 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 13:19:42] 2026-03-09 17:18:38,419 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 13:19:42] 2026-03-09 17:18:38,419 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 13:19:42] 2026-03-09 17:18:38,419 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 13:19:42] 2026-03-09 17:18:38,419 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 13:19:42] 2026-03-09 17:18:38,420 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 13:19:42] 2026-03-09 17:18:38,420 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 13:19:42] 2026-03-09 17:18:38,420 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 13:19:42] 2026-03-09 17:18:38,420 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 13:19:42] 2026-03-09 17:18:38,420 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 13:19:42] 2026-03-09 17:18:38,420 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 13:19:42] 2026-03-09 17:18:38,420 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 13:19:42] 2026-03-09 17:18:38,420 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 13:19:42] 2026-03-09 17:18:38,421 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 13:19:42] 2026-03-09 17:18:38,421 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 13:19:42] 2026-03-09 17:18:38,421 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 13:19:42] 2026-03-09 17:18:38,421 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 13:19:42] 2026-03-09 17:18:38,421 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 13:19:42] 2026-03-09 17:18:38,421 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 13:19:42] 2026-03-09 17:18:38,421 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 13:19:42] 2026-03-09 17:18:38,422 | INFO     | job 7040731588 has completed (purged errors)
[2026-03-09 13:19:42] 2026-03-09 17:18:38,422 | INFO     | overall cleanup function is called
[2026-03-09 13:19:42] 2026-03-09 17:18:39,430 | INFO     | --- collectZombieJob: --- 10, [3175521]
[2026-03-09 13:19:42] 2026-03-09 17:18:39,430 | INFO     | zombie collector waiting for pid 3175521
[2026-03-09 13:19:42] 2026-03-09 17:18:39,430 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 13:19:42] 2026-03-09 17:18:39,431 | INFO     | collected zombie processes
[2026-03-09 13:19:42] 2026-03-09 17:18:39,431 | INFO     | will attempt to kill all subprocesses of pid=3175521
[2026-03-09 13:19:42] 2026-03-09 17:18:39,654 | INFO     | process IDs to be killed: [3175521] (in reverse order)
[2026-03-09 13:19:42] 2026-03-09 17:18:39,728 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 13:19:42] 2026-03-09 17:18:39,728 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 13:19:42] 2026-03-09 17:18:39,735 | INFO     | did not find any defunct processes belonging to 3175521
[2026-03-09 13:19:42] 2026-03-09 17:18:39,740 | INFO     | did not find any defunct processes belonging to 3175521
[2026-03-09 13:19:42] 2026-03-09 17:18:39,740 | INFO     | ready for new job
[2026-03-09 13:19:42] 2026-03-09 17:18:39,740 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 13:19:42] 2026-03-09 17:18:39,742 | INFO     | **************************************
[2026-03-09 13:19:42] 2026-03-09 17:18:39,742 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 13:19:42] 2026-03-09 17:18:39,743 | INFO     | **************************************
[2026-03-09 13:19:42] 2026-03-09 17:18:39,743 | INFO     | 
[2026-03-09 13:19:42] 2026-03-09 17:18:39,745 | INFO     | architecture information:
[2026-03-09 13:19:42] 2026-03-09 17:18:39,745 | INFO     | executing command: cat /etc/os-release
[2026-03-09 13:19:42] 2026-03-09 17:18:39,762 | INFO     | cat /etc/os-release:
[2026-03-09 13:19:42] NAME="CentOS Linux"
[2026-03-09 13:19:42] VERSION="7 (Core)"
[2026-03-09 13:19:42] ID="centos"
[2026-03-09 13:19:42] ID_LIKE="rhel fedora"
[2026-03-09 13:19:42] VERSION_ID="7"
[2026-03-09 13:19:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 13:19:42] ANSI_COLOR="0;31"
[2026-03-09 13:19:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 13:19:42] HOME_URL="https://www.centos.org/"
[2026-03-09 13:19:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 13:19:42] 
[2026-03-09 13:19:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 13:19:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 13:19:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 13:19:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 13:19:42] 
[2026-03-09 13:19:42] 2026-03-09 17:18:39,762 | INFO     | **************************************
[2026-03-09 13:19:42] 2026-03-09 17:18:40,265 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/20
[2026-03-09 13:19:42] 2026-03-09 17:18:40,285 | INFO     | sufficient remaining disk space (405788426240 B)
[2026-03-09 13:19:42] 2026-03-09 17:18:40,285 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 13:19:42] 2026-03-09 17:18:40,285 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 13:19:42] 2026-03-09 17:18:40,285 | INFO     | update_server=False
[2026-03-09 13:19:42] 2026-03-09 17:18:40,285 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 13:19:42] 2026-03-09 17:18:40,287 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 13:19:42] 2026-03-09 17:18:40,290 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 13:19:42] 2026-03-09 17:18:40,405 | INFO     | all payload control threads have been joined
[2026-03-09 13:19:42] 2026-03-09 17:18:40,507 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 13:19:42] 2026-03-09 17:18:40,507 | INFO     | aborting loop
[2026-03-09 13:19:42] 2026-03-09 17:18:40,944 | INFO     | all data control threads have been joined
[2026-03-09 13:19:42] 2026-03-09 17:18:41,291 | INFO     | [job] retrieve thread has finished
[2026-03-09 13:19:42] 2026-03-09 17:18:41,292 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 13:19:42] 2026-03-09 17:18:41,292 | INFO     | [job] queue monitor thread has finished
[2026-03-09 13:19:42] 2026-03-09 17:18:41,411 | INFO     | [payload] control thread has finished
[2026-03-09 13:19:42] 2026-03-09 17:18:41,512 | INFO     | [job] job monitor thread has finished
[2026-03-09 13:19:42] 2026-03-09 17:18:41,684 | INFO     | [payload] validate_post thread has finished
[2026-03-09 13:19:42] 2026-03-09 17:18:41,760 | INFO     | [job] validate thread has finished
[2026-03-09 13:19:42] 2026-03-09 17:18:41,783 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 13:19:42] 2026-03-09 17:18:41,837 | INFO     | all job control threads have been joined
[2026-03-09 13:19:42] 2026-03-09 17:18:41,918 | INFO     | [payload] failed_post thread has finished
[2026-03-09 13:19:42] 2026-03-09 17:18:41,950 | INFO     | [data] control thread has finished
[2026-03-09 13:19:42] 2026-03-09 17:18:42,258 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 13:19:42] 2026-03-09 17:18:42,295 | INFO     | [data] copytool_out thread has finished
[2026-03-09 13:19:42] 2026-03-09 17:18:42,325 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 13:19:42] 2026-03-09 17:18:42,483 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 13:19:42] 2026-03-09 17:18:42,620 | INFO     | [data] copytool_in thread has finished
[2026-03-09 13:19:42] 2026-03-09 17:18:42,842 | INFO     | [job] control thread has finished
[2026-03-09 13:19:42] 2026-03-09 17:18:45,298 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 13:19:42] 2026-03-09 17:19:10,170 | INFO     | PID=3170841 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 13:19:42] 2026-03-09 17:19:10,170 | INFO     | .. there are 4 such processes running
[2026-03-09 13:19:42] 2026-03-09 17:19:10,171 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 13:19:42] 2026-03-09 17:19:10,171 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 13:19:42] 2026-03-09 17:19:10,172 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 13:19:42] 2026-03-09 17:19:37,032 | INFO     | [monitor] cgroup control has ended
[2026-03-09 13:19:42] 2026-03-09 17:19:37,068 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138196669212480)>', '<ExcThread(monitor, started 138196176320256)>']
[2026-03-09 13:19:42] 2026-03-09 17:19:37,310 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 13:19:42] 2026-03-09 17:19:37,310 | INFO     | [monitor] control thread has ended
[2026-03-09 13:19:42] 2026-03-09 17:19:42,093 | INFO     | all workflow threads have been joined
[2026-03-09 13:19:42] 2026-03-09 17:19:42,093 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 13:19:42] 2026-03-09 17:19:42,093 | INFO     | traces error code: 0
[2026-03-09 13:19:42] 2026-03-09 17:19:42,093 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 13:19:42] 2026-03-09 17:19:42,235 [wrapper] ==== pilot stdout END ====
[2026-03-09 13:19:42] 2026-03-09 17:19:42,238 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 13:19:42] 2026-03-09 17:19:42,243 [wrapper] pilotpid: 3170841
[2026-03-09 13:19:42] 2026-03-09 17:19:42,251 [wrapper] Pilot exit status: 0
[2026-03-09 13:19:42] 2026-03-09 17:19:42,263 [wrapper] pandaids: 7040731588
[2026-03-09 13:19:42] 2026-03-09 17:19:42,313 [wrapper] cleanup supervisor_pilot 3265094 3170842
[2026-03-09 13:19:42] 2026-03-09 17:19:42,319 [wrapper] Test setup, not cleaning
[2026-03-09 13:19:42] 2026-03-09 17:19:42,324 [wrapper] apfmon messages muted
[2026-03-09 13:19:42] 2026-03-09 17:19:42,328 [wrapper] ==== wrapper stdout END ====
[2026-03-09 13:19:42] 2026-03-09 17:19:42,338 [wrapper] ==== wrapper stderr END ====
[2026-03-09 13:19:42]  *** Error codes and diagnostics ***
[2026-03-09 13:19:42]     "exeErrorCode": 0,
[2026-03-09 13:19:42]     "exeErrorDiag": "",
[2026-03-09 13:19:42]     "pilotErrorCode": 0,
[2026-03-09 13:19:42]     "pilotErrorDiag": "",
[2026-03-09 13:19:42]  *** Listing of results directory ***
[2026-03-09 13:19:42] total 618408
[2026-03-09 13:19:42] -rw-r--r-- 1 whitlerd whitlerd    584627 Mar  9 03:59 pilot3.tar.gz
[2026-03-09 13:19:42] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar  9 04:01 queuedata.json
[2026-03-09 13:19:42] -rwx------ 1 whitlerd whitlerd     36322 Mar  9 04:01 runpilot2-wrapper.sh
[2026-03-09 13:19:42] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar  9 10:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 13:19:42] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar  9 10:11 run_atlas
[2026-03-09 13:19:42] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar  9 10:11 job.xml
[2026-03-09 13:19:42] -rw-r--r-- 2 whitlerd whitlerd 441568408 Mar  9 10:11 EVNT.46701403._001339.pool.root.1
[2026-03-09 13:19:42] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  9 10:11 start_atlas.sh
[2026-03-09 13:19:42] drwxrwx--x 2 whitlerd whitlerd      4096 Mar  9 10:11 shared
[2026-03-09 13:19:42] -rw-r--r-- 2 whitlerd whitlerd    597955 Mar  9 10:11 input.tar.gz
[2026-03-09 13:19:42] -rw-rw-r-- 1 whitlerd whitlerd      9087 Mar  9 10:11 init_data.xml
[2026-03-09 13:19:42] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  9 10:11 boinc_setup_complete
[2026-03-09 13:19:42] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  9 10:11 boinc_lockfile
[2026-03-09 13:19:42] -rw-rw-r-- 1 whitlerd whitlerd      2562 Mar  9 10:11 pandaJob.out
[2026-03-09 13:19:42] -rw------- 1 whitlerd whitlerd    990728 Mar  9 10:12 agis_schedconf.cvmfs.json
[2026-03-09 13:19:42] -rw------- 1 whitlerd whitlerd       434 Mar  9 10:12 workernode_map.json
[2026-03-09 13:19:42] drwx------ 5 whitlerd whitlerd      4096 Mar  9 10:12 pilot3
[2026-03-09 13:19:42] -rw------- 1 whitlerd whitlerd 183776292 Mar  9 13:17 HITS.48955010._016956.pool.root.1
[2026-03-09 13:19:42] -rw-rw-r-- 1 whitlerd whitlerd       531 Mar  9 13:17 boinc_task_state.xml
[2026-03-09 13:19:42] -rw------- 1 whitlerd whitlerd      1030 Mar  9 13:18 memory_monitor_summary.json
[2026-03-09 13:19:42] -rw------- 1 whitlerd whitlerd   1511578 Mar  9 13:18 agis_ddmendpoints.agis.ALL.json
[2026-03-09 13:19:42] -rw------- 1 whitlerd whitlerd    375768 Mar  9 13:18 log.48955010._016956.job.log.tgz.1
[2026-03-09 13:19:42] -rw------- 1 whitlerd whitlerd      6349 Mar  9 13:18 heartbeat.json
[2026-03-09 13:19:42] -rw------- 1 whitlerd whitlerd        95 Mar  9 13:19 pilot_heartbeat.json
[2026-03-09 13:19:42] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar  9 13:19 boinc_mmap_file
[2026-03-09 13:19:42] -rw-rw-r-- 1 whitlerd whitlerd        28 Mar  9 13:19 wrapper_checkpoint.txt
[2026-03-09 13:19:42] -rw------- 1 whitlerd whitlerd      4835 Mar  9 13:19 pilotlog.txt
[2026-03-09 13:19:42] -rw------- 1 whitlerd whitlerd   1614542 Mar  9 13:19 log.48955010._016956.job.log.1
[2026-03-09 13:19:42] -rw------- 1 whitlerd whitlerd       357 Mar  9 13:19 output.list
[2026-03-09 13:19:42] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar  9 13:19 runtime_log
[2026-03-09 13:19:42] -rw------- 1 whitlerd whitlerd   2007040 Mar  9 13:19 result.tar.gz
[2026-03-09 13:19:42] -rw-rw-r-- 1 whitlerd whitlerd      9036 Mar  9 13:19 runtime_log.err
[2026-03-09 13:19:42] -rw------- 1 whitlerd whitlerd       649 Mar  9 13:19 5dXMDmGjkJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmqrbLDm8iTkMm.diag
[2026-03-09 13:19:42] -rw-rw-r-- 1 whitlerd whitlerd     21425 Mar  9 13:19 stderr.txt
[2026-03-09 13:19:42] HITS file was successfully produced:
[2026-03-09 13:19:42] -rw------- 1 whitlerd whitlerd 183776292 Mar  9 13:17 shared/HITS.pool.root.1
[2026-03-09 13:19:42]  *** Contents of shared directory: ***
[2026-03-09 13:19:42] total 613260
[2026-03-09 13:19:42] -rw-r--r-- 2 whitlerd whitlerd 441568408 Mar  9 10:11 ATLAS.root_0
[2026-03-09 13:19:42] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  9 10:11 start_atlas.sh
[2026-03-09 13:19:42] -rw-r--r-- 2 whitlerd whitlerd    597955 Mar  9 10:11 input.tar.gz
[2026-03-09 13:19:42] -rw------- 1 whitlerd whitlerd 183776292 Mar  9 13:17 HITS.pool.root.1
[2026-03-09 13:19:42] -rw------- 1 whitlerd whitlerd   2007040 Mar  9 13:19 result.tar.gz
13:19:43 (3166560): run_atlas exited; CPU time 43794.185539
13:19:43 (3166560): called boinc_finish(0)

</stderr_txt>
]]>

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