Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:51:06 (2029302): wrapper (7.7.26015): starting
14:51:06 (2029302): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 14:51:06] Arguments: --nthreads 4
[2026-03-10 14:51:06] Threads: 4
[2026-03-10 14:51:06] Checking for CVMFS
[2026-03-10 14:51:06] No cvmfs_config command found, will try listing directly
[2026-03-10 14:51:06] CVMFS is ok
[2026-03-10 14:51:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 14:51:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 14:51:06] Further information can be found at the LHC@home message board.
[2026-03-10 14:51:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 14:51:06] Checking for apptainer binary...
[2026-03-10 14:51:06] which: no apptainer in ((null))
[2026-03-10 14:51:06] apptainer is not installed, using version from CVMFS
[2026-03-10 14:51:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 14:51:06] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot248/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-10 14:51:06] apptainer works
[2026-03-10 14:51:06] Set ATHENA_PROC_NUMBER=4
[2026-03-10 14:51:06] Set ATHENA_CORE_NUMBER=4
[2026-03-10 14:51:06] Starting ATLAS job with PandaID=7047365408
[2026-03-10 14:51:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot248/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
15:51:30 (2531505): wrapper (7.7.26015): starting
15:51:30 (2531505): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 15:51:30] Arguments: --nthreads 4
[2026-03-10 15:51:30] Threads: 4
[2026-03-10 15:51:30] This job has been restarted, cleaning up previous attempt
[2026-03-10 15:51:30] Checking for CVMFS
[2026-03-10 15:51:30] No cvmfs_config command found, will try listing directly
[2026-03-10 15:51:30] CVMFS is ok
[2026-03-10 15:51:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 15:51:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 15:51:30] Further information can be found at the LHC@home message board.
[2026-03-10 15:51:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 15:51:30] Checking for apptainer binary...
[2026-03-10 15:51:30] which: no apptainer in ((null))
[2026-03-10 15:51:30] apptainer is not installed, using version from CVMFS
[2026-03-10 15:51:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 15:51:30] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot248/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-10 15:51:30] apptainer works
[2026-03-10 15:51:30] Set ATHENA_PROC_NUMBER=4
[2026-03-10 15:51:30] Set ATHENA_CORE_NUMBER=4
[2026-03-10 15:51:30] Starting ATLAS job with PandaID=7047365408
[2026-03-10 15:51:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot248/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 17:39:31]  *** The last 200 lines of the pilot log: ***
[2026-03-10 17:39:31]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-10 17:39:31]  is_altstaged=None
[2026-03-10 17:39:31]  is_tar=False
[2026-03-10 17:39:31]  lfn=log.48966988._023213.job.log.tgz.1
[2026-03-10 17:39:31]  mtime=0
[2026-03-10 17:39:31]  protocol_id=None
[2026-03-10 17:39:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-10 17:39:31]  replicas=None
[2026-03-10 17:39:31]  scope=mc23_13p6TeV
[2026-03-10 17:39:31]  status=None
[2026-03-10 17:39:31]  status_code=0
[2026-03-10 17:39:31]  storage_token=
[2026-03-10 17:39:31]  surl=/var/lib/boinc/var/slot248/slots/0/PanDA_Pilot-7047365408/log.48966988._023213.job.log.tgz.1
[2026-03-10 17:39:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/62/8c/log.48966988._023213.job.log.tgz.1
[2026-03-10 17:39:31]  workdir=None
[2026-03-10 17:39:31] ]
[2026-03-10 17:39:31] 2026-03-10 16:31:00,176 | INFO     | transferring file log.48966988._023213.job.log.tgz.1 from /var/lib/boinc/var/slot248/slots/0/PanDA_Pilot-7047365408/log.48966988._023213.job.log.tgz.1 to /var/lib/
[2026-03-10 17:39:31] 2026-03-10 16:31:00,176 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot248/slots/0/PanDA_Pilot-7047365408/log.48966988._023213.job.log.tgz.1 /var/lib/boinc/var/slot248/slots/0/
[2026-03-10 17:39:31] 2026-03-10 16:31:00,190 | INFO     | adding to output.list: log.48966988._023213.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/62/8c/log.48966988._023213.job.log.tg
[2026-03-10 17:39:31] 2026-03-10 16:31:00,191 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 17:39:31] 2026-03-10 16:31:00,191 | INFO     | summary of transferred files:
[2026-03-10 17:39:31] 2026-03-10 16:31:00,191 | INFO     |  -- lfn=log.48966988._023213.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 17:39:31] 2026-03-10 16:31:00,191 | INFO     | stage-out finished correctly
[2026-03-10 17:39:31] 2026-03-10 16:31:00,223 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 17:39:31] 2026-03-10 16:31:01,696 | INFO     | time since job start (5963s) is within the limit (349056.0s)
[2026-03-10 17:39:31] 2026-03-10 16:31:02,088 | WARNING  | process 2716063 can no longer be monitored (due to stat problems) - aborting
[2026-03-10 17:39:31] 2026-03-10 16:31:02,088 | INFO     | using path: /var/lib/boinc/var/slot248/slots/0/PanDA_Pilot-7047365408/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 17:39:31] 2026-03-10 16:31:02,551 | INFO     | number of running child processes to parent process 2716063: 1
[2026-03-10 17:39:31] 2026-03-10 16:31:02,551 | INFO     | maximum number of monitored processes: 6
[2026-03-10 17:39:31] 2026-03-10 16:31:02,930 | INFO     | job 7047365408 has state=finished
[2026-03-10 17:39:31] 2026-03-10 16:31:02,930 | INFO     | preparing for final server update for job 7047365408 in state='finished'
[2026-03-10 17:39:31] 2026-03-10 16:31:02,930 | INFO     | reading metadata from: /var/lib/boinc/var/slot248/slots/0/PanDA_Pilot-7047365408/jobReport.json
[2026-03-10 17:39:31] 2026-03-10 16:31:02,931 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot248/slots/0/workernode_map.json
[2026-03-10 17:39:31] 2026-03-10 16:31:02,932 | INFO     | this job has now completed (state=finished)
[2026-03-10 17:39:31] 2026-03-10 16:31:02,932 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 17:39:31] 2026-03-10 16:31:02,932 | INFO     | log transfer has been attempted: DONE
[2026-03-10 17:39:31] 2026-03-10 16:31:02,932 | INFO     | job 7047365408 has finished - writing final server update
[2026-03-10 17:39:31] 2026-03-10 16:31:02,932 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2514804/.job.ad'
[2026-03-10 17:39:31] 2026-03-10 16:31:02,932 | INFO     | total number of processed events: 400 (read)
[2026-03-10 17:39:31] 2026-03-10 16:31:02,950 | INFO     | using path: /var/lib/boinc/var/slot248/slots/0/PanDA_Pilot-7047365408/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 17:39:31] 2026-03-10 16:31:02,950 | INFO     | extracted standard info from prmon json
[2026-03-10 17:39:31] 2026-03-10 16:31:02,950 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 17:39:31] 2026-03-10 16:31:02,950 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 17:39:31] 2026-03-10 16:31:02,951 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 17:39:31] 2026-03-10 16:31:02,951 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 17:39:31] 2026-03-10 16:31:02,952 | INFO     | fitting pss+swap vs Time
[2026-03-10 17:39:31] 2026-03-10 16:31:02,952 | INFO     | sum of square deviations: 233641590.0
[2026-03-10 17:39:31] 2026-03-10 16:31:02,952 | INFO     | sum of deviations: 901364425.9999999
[2026-03-10 17:39:31] 2026-03-10 16:31:02,952 | INFO     | mean x: 1773157375.0
[2026-03-10 17:39:31] 2026-03-10 16:31:02,952 | INFO     | mean y: 2329905.5934065934
[2026-03-10 17:39:31] 2026-03-10 16:31:02,952 | INFO     | intersect: -6838322820.3384
[2026-03-10 17:39:31] 2026-03-10 16:31:02,952 | INFO     | chi2: 0.00023161343080276012
[2026-03-10 17:39:31] 2026-03-10 16:31:02,953 | INFO     | current memory leak: 3.86 B/s (using 91 data points, chi2=0.00)
[2026-03-10 17:39:31] 2026-03-10 16:31:02,953 | INFO     | could have reported an average CPU frequency of 3597 MHz (7 samples)
[2026-03-10 17:39:31] 2026-03-10 16:31:02,953 | INFO     | ..............................
[2026-03-10 17:39:31] 2026-03-10 16:31:02,953 | INFO     | . Timing measurements:
[2026-03-10 17:39:31] 2026-03-10 16:31:02,953 | INFO     | . get job = 0 s
[2026-03-10 17:39:31] 2026-03-10 16:31:02,953 | INFO     | . initial setup = 0 s
[2026-03-10 17:39:31] 2026-03-10 16:31:02,953 | INFO     | . payload setup = 4 s
[2026-03-10 17:39:31] 2026-03-10 16:31:02,953 | INFO     | . stage-in = 0 s
[2026-03-10 17:39:31] 2026-03-10 16:31:02,953 | INFO     | . payload execution = 5942 s
[2026-03-10 17:39:31] 2026-03-10 16:31:02,953 | INFO     | . stage-out = 0 s
[2026-03-10 17:39:31] 2026-03-10 16:31:02,953 | INFO     | . log creation = 0 s
[2026-03-10 17:39:31] 2026-03-10 16:31:02,953 | INFO     | ..............................
[2026-03-10 17:39:31] 2026-03-10 16:31:03,042 | INFO     | 
[2026-03-10 17:39:31] 2026-03-10 16:31:03,043 | INFO     | job summary report
[2026-03-10 17:39:31] 2026-03-10 16:31:03,043 | INFO     | --------------------------------------------------
[2026-03-10 17:39:31] 2026-03-10 16:31:03,043 | INFO     | PanDA job id: 7047365408
[2026-03-10 17:39:31] 2026-03-10 16:31:03,043 | INFO     | task id: 48966988
[2026-03-10 17:39:31] 2026-03-10 16:31:03,043 | INFO     | errors: (none)
[2026-03-10 17:39:31] 2026-03-10 16:31:03,043 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 17:39:31] 2026-03-10 16:31:03,043 | INFO     | pilot state: finished 
[2026-03-10 17:39:31] 2026-03-10 16:31:03,043 | INFO     | transexitcode: 0
[2026-03-10 17:39:31] 2026-03-10 16:31:03,043 | INFO     | exeerrorcode: 0
[2026-03-10 17:39:31] 2026-03-10 16:31:03,043 | INFO     | exeerrordiag: 
[2026-03-10 17:39:31] 2026-03-10 16:31:03,043 | INFO     | exitcode: 0
[2026-03-10 17:39:31] 2026-03-10 16:31:03,043 | INFO     | exitmsg: OK
[2026-03-10 17:39:31] 2026-03-10 16:31:03,043 | INFO     | cpuconsumptiontime: 22896 s
[2026-03-10 17:39:31] 2026-03-10 16:31:03,043 | INFO     | nevents: 400
[2026-03-10 17:39:31] 2026-03-10 16:31:03,043 | INFO     | neventsw: 0
[2026-03-10 17:39:31] 2026-03-10 16:31:03,044 | INFO     | pid: 2716063
[2026-03-10 17:39:31] 2026-03-10 16:31:03,044 | INFO     | pgrp: 2716063
[2026-03-10 17:39:31] 2026-03-10 16:31:03,044 | INFO     | corecount: 4
[2026-03-10 17:39:31] 2026-03-10 16:31:03,044 | INFO     | event service: False
[2026-03-10 17:39:31] 2026-03-10 16:31:03,044 | INFO     | sizes: {0: 2280283, 11: 2280283, 5950: 2307157, 5951: 2316235, 5954: 2316373}
[2026-03-10 17:39:31] 2026-03-10 16:31:03,044 | INFO     | --------------------------------------------------
[2026-03-10 17:39:31] 2026-03-10 16:31:03,044 | INFO     | 
[2026-03-10 17:39:31] 2026-03-10 16:31:03,044 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot248/slots/0
[2026-03-10 17:39:31] 2026-03-10 16:31:03,066 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 17:39:31] 2026-03-10 16:31:03,067 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 17:39:31] 2026-03-10 16:31:03,067 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 17:39:31] 2026-03-10 16:31:03,067 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 17:39:31] 2026-03-10 16:31:03,067 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 17:39:31] 2026-03-10 16:31:03,067 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 17:39:31] 2026-03-10 16:31:03,067 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 17:39:31] 2026-03-10 16:31:03,067 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 17:39:31] 2026-03-10 16:31:03,067 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 17:39:31] 2026-03-10 16:31:03,067 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 17:39:31] 2026-03-10 16:31:03,067 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 17:39:31] 2026-03-10 16:31:03,067 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 17:39:31] 2026-03-10 16:31:03,067 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 17:39:31] 2026-03-10 16:31:03,067 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 17:39:31] 2026-03-10 16:31:03,067 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 17:39:31] 2026-03-10 16:31:03,067 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 17:39:31] 2026-03-10 16:31:03,067 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 17:39:31] 2026-03-10 16:31:03,067 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 17:39:31] 2026-03-10 16:31:03,067 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 17:39:31] 2026-03-10 16:31:03,067 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 17:39:31] 2026-03-10 16:31:03,067 | INFO     | job 7047365408 has completed (purged errors)
[2026-03-10 17:39:31] 2026-03-10 16:31:03,067 | INFO     | overall cleanup function is called
[2026-03-10 17:39:31] 2026-03-10 16:31:04,074 | INFO     | --- collectZombieJob: --- 10, [2716063]
[2026-03-10 17:39:31] 2026-03-10 16:31:04,075 | INFO     | zombie collector waiting for pid 2716063
[2026-03-10 17:39:31] 2026-03-10 16:31:04,075 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 17:39:31] 2026-03-10 16:31:04,075 | INFO     | collected zombie processes
[2026-03-10 17:39:31] 2026-03-10 16:31:04,075 | INFO     | will attempt to kill all subprocesses of pid=2716063
[2026-03-10 17:39:31] 2026-03-10 16:31:04,561 | INFO     | process IDs to be killed: [2716063] (in reverse order)
[2026-03-10 17:39:31] 2026-03-10 16:31:04,794 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 17:39:31] 2026-03-10 16:31:04,794 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 17:39:31] 2026-03-10 16:31:04,826 | INFO     | did not find any defunct processes belonging to 2716063
[2026-03-10 17:39:31] 2026-03-10 16:31:04,856 | INFO     | did not find any defunct processes belonging to 2716063
[2026-03-10 17:39:31] 2026-03-10 16:31:04,856 | INFO     | ready for new job
[2026-03-10 17:39:31] 2026-03-10 16:31:04,856 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 17:39:31] 2026-03-10 16:31:04,858 | INFO     | **************************************
[2026-03-10 17:39:31] 2026-03-10 16:31:04,858 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 17:39:31] 2026-03-10 16:31:04,858 | INFO     | **************************************
[2026-03-10 17:39:31] 2026-03-10 16:31:04,858 | INFO     | 
[2026-03-10 17:39:31] 2026-03-10 16:31:04,863 | INFO     | architecture information:
[2026-03-10 17:39:31] 2026-03-10 16:31:04,864 | INFO     | executing command: cat /etc/os-release
[2026-03-10 17:39:31] 2026-03-10 16:31:04,878 | INFO     | cat /etc/os-release:
[2026-03-10 17:39:31] NAME="CentOS Linux"
[2026-03-10 17:39:31] VERSION="7 (Core)"
[2026-03-10 17:39:31] ID="centos"
[2026-03-10 17:39:31] ID_LIKE="rhel fedora"
[2026-03-10 17:39:31] VERSION_ID="7"
[2026-03-10 17:39:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 17:39:31] ANSI_COLOR="0;31"
[2026-03-10 17:39:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 17:39:31] HOME_URL="https://www.centos.org/"
[2026-03-10 17:39:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 17:39:31] 
[2026-03-10 17:39:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 17:39:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 17:39:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 17:39:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 17:39:31] 
[2026-03-10 17:39:31] 2026-03-10 16:31:04,878 | INFO     | **************************************
[2026-03-10 17:39:31] 2026-03-10 16:31:05,381 | INFO     | executing command: df -mP /var/lib/boinc/var/slot248/slots/0
[2026-03-10 17:39:31] 2026-03-10 16:31:05,395 | INFO     | sufficient remaining disk space (19836960768 B)
[2026-03-10 17:39:31] 2026-03-10 16:31:05,395 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 17:39:31] 2026-03-10 16:31:05,395 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 17:39:31] 2026-03-10 16:31:05,395 | INFO     | update_server=False
[2026-03-10 17:39:31] 2026-03-10 16:31:05,395 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 17:39:31] 2026-03-10 16:31:05,730 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 17:39:31] 2026-03-10 16:31:05,756 | INFO     | all payload control threads have been joined
[2026-03-10 17:39:31] 2026-03-10 16:31:05,826 | INFO     | all data control threads have been joined
[2026-03-10 17:39:31] 2026-03-10 16:31:06,058 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 17:39:31] 2026-03-10 16:31:06,059 | INFO     | aborting loop
[2026-03-10 17:39:31] 2026-03-10 16:31:06,260 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 17:39:31] 2026-03-10 16:31:06,401 | INFO     | [job] retrieve thread has finished
[2026-03-10 17:39:31] 2026-03-10 16:31:06,602 | INFO     | [payload] validate_post thread has finished
[2026-03-10 17:39:31] 2026-03-10 16:31:06,652 | INFO     | [job] validate thread has finished
[2026-03-10 17:39:31] 2026-03-10 16:31:06,762 | INFO     | [payload] control thread has finished
[2026-03-10 17:39:31] 2026-03-10 16:31:06,832 | INFO     | [data] control thread has finished
[2026-03-10 17:39:31] 2026-03-10 16:31:06,857 | INFO     | all job control threads have been joined
[2026-03-10 17:39:31] 2026-03-10 16:31:07,064 | INFO     | [job] job monitor thread has finished
[2026-03-10 17:39:31] 2026-03-10 16:31:07,113 | INFO     | [payload] failed_post thread has finished
[2026-03-10 17:39:31] 2026-03-10 16:31:07,351 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 17:39:31] 2026-03-10 16:31:07,442 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 17:39:31] 2026-03-10 16:31:07,525 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 17:39:31] 2026-03-10 16:31:07,541 | INFO     | [data] copytool_in thread has finished
[2026-03-10 17:39:31] 2026-03-10 16:31:07,735 | INFO     | [data] copytool_out thread has finished
[2026-03-10 17:39:31] 2026-03-10 16:31:07,862 | INFO     | [job] control thread has finished
[2026-03-10 17:39:31] 2026-03-10 16:31:08,008 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 17:39:31] 2026-03-10 16:31:09,013 | INFO     | [job] queue monitor thread has finished
[2026-03-10 17:39:31] 2026-03-10 16:31:10,266 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 17:39:31] 2026-03-10 16:31:16,100 | INFO     | job.realtimelogging is not enabled
[2026-03-10 17:39:31] 2026-03-10 16:31:17,105 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 17:39:31] 2026-03-10 16:31:35,342 | INFO     | PID=2605303 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 17:39:31] 2026-03-10 16:31:35,343 | INFO     | .. there are 46 such processes running
[2026-03-10 17:39:31] 2026-03-10 16:31:35,346 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 17:39:31] 2026-03-10 16:31:35,346 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 17:39:31] 2026-03-10 16:31:35,347 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 17:39:31] 2026-03-10 16:31:47,481 | INFO     | [monitor] cgroup control has ended
[2026-03-10 17:39:31] 2026-03-10 16:31:48,023 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22696902190912)>', '<ExcThread(monitor, started 22696667920128)>']
[2026-03-10 17:39:31] 2026-03-10 16:31:48,392 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 17:39:31] 2026-03-10 16:31:48,393 | INFO     | [monitor] control thread has ended
[2026-03-10 17:39:31] 2026-03-10 16:31:53,047 | INFO     | all workflow threads have been joined
[2026-03-10 17:39:31] 2026-03-10 16:31:53,048 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 17:39:31] 2026-03-10 16:31:53,048 | INFO     | traces error code: 0
[2026-03-10 17:39:31] 2026-03-10 16:31:53,048 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 17:39:31] 2026-03-10 16:31:53,255 [wrapper] ==== pilot stdout END ====
[2026-03-10 17:39:31] 2026-03-10 16:31:53,258 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 17:39:31] 2026-03-10 16:31:53,260 [wrapper] pilotpid: 2605303
[2026-03-10 17:39:31] 2026-03-10 16:31:53,262 [wrapper] Pilot exit status: 0
[2026-03-10 17:39:31] 2026-03-10 16:31:53,271 [wrapper] pandaids: 7047365408 7047365408
[2026-03-10 17:39:31] 2026-03-10 16:31:53,408 [wrapper] cleanup supervisor_pilot 3549669 2605305
[2026-03-10 17:39:31] 2026-03-10 16:31:53,411 [wrapper] Test setup, not cleaning
[2026-03-10 17:39:31] 2026-03-10 16:31:53,412 [wrapper] apfmon messages muted
[2026-03-10 17:39:31] 2026-03-10 16:31:53,413 [wrapper] ==== wrapper stdout END ====
[2026-03-10 17:39:31] 2026-03-10 16:31:53,414 [wrapper] ==== wrapper stderr END ====
[2026-03-10 17:39:31]  *** Error codes and diagnostics ***
[2026-03-10 17:39:31]     "exeErrorCode": 0,
[2026-03-10 17:39:31]     "exeErrorDiag": "",
[2026-03-10 17:39:31]     "pilotErrorCode": 0,
[2026-03-10 17:39:31]     "pilotErrorDiag": "",
[2026-03-10 17:39:31]  *** Listing of results directory ***
[2026-03-10 17:39:31] total 619836
[2026-03-10 17:39:31] drwx------. 5 boinc boinc      4096 Feb  2 16:00 pilot3
[2026-03-10 17:39:31] -rw-r--r--. 1 boinc boinc    584627 Mar  9 14:02 pilot3.tar.gz
[2026-03-10 17:39:31] -rwx------. 1 boinc boinc     36322 Mar  9 15:06 runpilot2-wrapper.sh
[2026-03-10 17:39:31] -rw-r--r--. 1 boinc boinc      5111 Mar  9 15:06 queuedata.json
[2026-03-10 17:39:31] -rw-r--r--. 1 boinc boinc       100 Mar 10 14:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 17:39:31] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 14:51 run_atlas
[2026-03-10 17:39:31] -rw-r--r--. 1 boinc boinc       105 Mar 10 14:51 job.xml
[2026-03-10 17:39:31] -rw-r--r--. 3 boinc boinc 213682326 Mar 10 14:51 EVNT.48966985._000903.pool.root.1
[2026-03-10 17:39:31] -rw-r--r--. 3 boinc boinc 213682326 Mar 10 14:51 ATLAS.root_0
[2026-03-10 17:39:31] -rw-r--r--. 2 boinc boinc     15845 Mar 10 14:51 start_atlas.sh
[2026-03-10 17:39:31] drwxrwx--x. 2 boinc boinc      4096 Mar 10 14:51 shared
[2026-03-10 17:39:31] -rw-r--r--. 2 boinc boinc    597967 Mar 10 14:51 input.tar.gz
[2026-03-10 17:39:31] -rw-r--r--. 1 boinc boinc         0 Mar 10 14:51 boinc_lockfile
[2026-03-10 17:39:31] -rw-------. 1 boinc boinc   1511578 Mar 10 14:51 agis_ddmendpoints.agis.ALL.json
[2026-03-10 17:39:31] -rw-r--r--. 1 boinc boinc      2592 Mar 10 15:51 pandaJob.out
[2026-03-10 17:39:31] -rw-------. 1 boinc boinc   1006737 Mar 10 15:51 agis_schedconf.cvmfs.json
[2026-03-10 17:39:31] -rw-------. 1 boinc boinc       445 Mar 10 15:51 workernode_map.json
[2026-03-10 17:39:31] -rw-r--r--. 1 boinc boinc      6714 Mar 10 15:52 init_data.xml
[2026-03-10 17:39:31] -rw-------. 1 boinc boinc 201102074 Mar 10 17:30 HITS.48966988._023213.pool.root.1
[2026-03-10 17:39:31] -rw-r--r--. 1 boinc boinc       529 Mar 10 17:30 boinc_task_state.xml
[2026-03-10 17:39:31] -rw-------. 1 boinc boinc      1027 Mar 10 17:30 memory_monitor_summary.json
[2026-03-10 17:39:31] -rw-------. 1 boinc boinc    291434 Mar 10 17:31 log.48966988._023213.job.log.tgz.1
[2026-03-10 17:39:31] -rw-------. 1 boinc boinc      6356 Mar 10 17:31 heartbeat.json
[2026-03-10 17:39:31] -rw-------. 1 boinc boinc        96 Mar 10 17:31 pilot_heartbeat.json
[2026-03-10 17:39:31] -rw-------. 1 boinc boinc      4902 Mar 10 17:31 pilotlog.txt
[2026-03-10 17:39:31] -rw-------. 1 boinc boinc    858745 Mar 10 17:31 log.48966988._023213.job.log.1
[2026-03-10 17:39:31] -rw-------. 1 boinc boinc       357 Mar 10 17:31 output.list
[2026-03-10 17:39:31] -rw-r--r--. 1 boinc boinc       620 Mar 10 17:31 runtime_log
[2026-03-10 17:39:31] -rw-------. 1 boinc boinc   1167360 Mar 10 17:31 result.tar.gz
[2026-03-10 17:39:31] -rw-r--r--. 1 boinc boinc      9298 Mar 10 17:31 runtime_log.err
[2026-03-10 17:39:31] -rw-------. 1 boinc boinc       788 Mar 10 17:31 GOTKDmPQqJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDm2uZLDm0xmtWn.diag
[2026-03-10 17:39:31] -rw-r--r--. 1 boinc boinc        26 Mar 10 17:39 wrapper_checkpoint.txt
[2026-03-10 17:39:31] -rw-r--r--. 1 boinc boinc      8192 Mar 10 17:39 boinc_mmap_file
[2026-03-10 17:39:31] -rw-r--r--. 1 boinc boinc     23231 Mar 10 17:39 stderr.txt
[2026-03-10 17:39:31] HITS file was successfully produced:
[2026-03-10 17:39:31] -rw-------. 1 boinc boinc 201102074 Mar 10 17:30 shared/HITS.pool.root.1
[2026-03-10 17:39:31]  *** Contents of shared directory: ***
[2026-03-10 17:39:31] total 406816
[2026-03-10 17:39:31] -rw-r--r--. 3 boinc boinc 213682326 Mar 10 14:51 ATLAS.root_0
[2026-03-10 17:39:31] -rw-r--r--. 2 boinc boinc     15845 Mar 10 14:51 start_atlas.sh
[2026-03-10 17:39:31] -rw-r--r--. 2 boinc boinc    597967 Mar 10 14:51 input.tar.gz
[2026-03-10 17:39:31] -rw-------. 1 boinc boinc 201102074 Mar 10 17:30 HITS.pool.root.1
[2026-03-10 17:39:31] -rw-------. 1 boinc boinc   1167360 Mar 10 17:31 result.tar.gz
17:39:33 (2531505): run_atlas exited; CPU time 23161.771317
17:39:33 (2531505): called boinc_finish(0)

</stderr_txt>
]]>

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