Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:01:15 (1700223): wrapper (7.7.26015): starting
10:01:15 (1700223): wrapper: running run_atlas (--nthreads 8)
[2026-03-09 10:01:15] Arguments: --nthreads 8
[2026-03-09 10:01:15] Threads: 8
[2026-03-09 10:01:15] Checking for CVMFS
[2026-03-09 10:01:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 10:01:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 10:01:16] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 10:01:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 10:01:17] 2.13.3.0 11793 178463 425488 157078 0 449 29938254 32935937 24095 16776704 0 646953195 99.532 820206319 34211 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-09 10:01:17] CVMFS is ok
[2026-03-09 10:01:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 10:01:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 10:01:17] Further information can be found at the LHC@home message board.
[2026-03-09 10:01:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 10:01:17] Checking for apptainer binary...
[2026-03-09 10:01:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 10:01:17] Running /usr/bin/apptainer --version
[2026-03-09 10:01:17] apptainer version 1.4.5-2.el9
[2026-03-09 10:01:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 10:01:18] c6-2-11-2.aglt2.org
[2026-03-09 10:01:18] apptainer works
[2026-03-09 10:01:18] Set ATHENA_PROC_NUMBER=8
[2026-03-09 10:01:18] Set ATHENA_CORE_NUMBER=8
[2026-03-09 10:01:18] Starting ATLAS job with PandaID=7035002114
[2026-03-09 10:01:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 14:04:21]  *** The last 200 lines of the pilot log: ***
[2026-03-09 14:04:21] 2026-03-09 18:03:33,008 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 14:04:21] 2026-03-09 18:03:33,008 | INFO     | log transfer has been attempted: DONE
[2026-03-09 14:04:21] 2026-03-09 18:03:33,008 | INFO     | job 7035002114 has finished - writing final server update
[2026-03-09 14:04:21] 2026-03-09 18:03:33,008 | INFO     | total number of processed events: 400 (read)
[2026-03-09 14:04:21] 2026-03-09 18:03:33,056 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7035002114/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 14:04:21] 2026-03-09 18:03:33,064 | INFO     | extracted standard info from prmon json
[2026-03-09 14:04:21] 2026-03-09 18:03:33,065 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 14:04:21] 2026-03-09 18:03:33,065 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 14:04:21] 2026-03-09 18:03:33,065 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 14:04:21] 2026-03-09 18:03:33,065 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 14:04:21] 2026-03-09 18:03:33,078 | INFO     | fitting pss+swap vs Time
[2026-03-09 14:04:21] 2026-03-09 18:03:33,078 | INFO     | sum of square deviations: 4075737266.3050804
[2026-03-09 14:04:21] 2026-03-09 18:03:33,080 | INFO     | sum of deviations: 46945288297.84741
[2026-03-09 14:04:21] 2026-03-09 18:03:33,080 | INFO     | mean x: 1773072216.9152544
[2026-03-09 14:04:21] 2026-03-09 18:03:33,080 | INFO     | mean y: 2459852.5423728814
[2026-03-09 14:04:21] 2026-03-09 18:03:33,080 | INFO     | intersect: -20420197683.34196
[2026-03-09 14:04:21] 2026-03-09 18:03:33,081 | INFO     | chi2: 4.869107907667123
[2026-03-09 14:04:21] 2026-03-09 18:03:33,089 | INFO     | sum of square deviations: 3822148248.268403
[2026-03-09 14:04:21] 2026-03-09 18:03:33,091 | INFO     | sum of deviations: 90178868593.28563
[2026-03-09 14:04:21] 2026-03-09 18:03:33,091 | INFO     | mean x: 1773072064.4199135
[2026-03-09 14:04:21] 2026-03-09 18:03:33,091 | INFO     | mean y: 2485621.285714286
[2026-03-09 14:04:21] 2026-03-09 18:03:33,091 | INFO     | intersect: -41830960471.80807
[2026-03-09 14:04:21] 2026-03-09 18:03:33,092 | INFO     | chi2: 2.7593888723526145
[2026-03-09 14:04:21] 2026-03-09 18:03:33,092 | INFO     | current chi2=2.7593888723526145 (change=43.328656405261576 %)
[2026-03-09 14:04:21] 2026-03-09 18:03:33,092 | INFO     | sum of square deviations: 3579303373.721221
[2026-03-09 14:04:21] 2026-03-09 18:03:33,103 | INFO     | sum of deviations: 88008710653.56636
[2026-03-09 14:04:21] 2026-03-09 18:03:33,103 | INFO     | mean x: 1773071911.9247787
[2026-03-09 14:04:21] 2026-03-09 18:03:33,103 | INFO     | mean y: 2484258.3274336285
[2026-03-09 14:04:21] 2026-03-09 18:03:33,103 | INFO     | intersect: -43594203859.874916
[2026-03-09 14:04:21] 2026-03-09 18:03:33,103 | INFO     | chi2: 2.75897494513659
[2026-03-09 14:04:21] 2026-03-09 18:03:33,103 | INFO     | current chi2=2.75897494513659 (change=0.015000684396885783 %)
[2026-03-09 14:04:21] 2026-03-09 18:03:33,104 | INFO     | right removable region: 225
[2026-03-09 14:04:21] 2026-03-09 18:03:33,104 | INFO     | sum of square deviations: 3822116772.268403
[2026-03-09 14:04:21] 2026-03-09 18:03:33,105 | INFO     | sum of deviations: -11857996736.770569
[2026-03-09 14:04:21] 2026-03-09 18:03:33,105 | INFO     | mean x: 1773072369.4199135
[2026-03-09 14:04:21] 2026-03-09 18:03:33,106 | INFO     | mean y: 2495059.471861472
[2026-03-09 14:04:21] 2026-03-09 18:03:33,106 | INFO     | intersect: 5503396163.066647
[2026-03-09 14:04:21] 2026-03-09 18:03:33,114 | INFO     | chi2: 2.347573149779439
[2026-03-09 14:04:21] 2026-03-09 18:03:33,114 | INFO     | current chi2=2.347573149779439 (change=51.78638070265722 %)
[2026-03-09 14:04:21] 2026-03-09 18:03:33,115 | INFO     | sum of square deviations: 3579255000.56638
[2026-03-09 14:04:21] 2026-03-09 18:03:33,116 | INFO     | sum of deviations: -26432338302.61946
[2026-03-09 14:04:21] 2026-03-09 18:03:33,116 | INFO     | mean x: 1773072521.920354
[2026-03-09 14:04:21] 2026-03-09 18:03:33,116 | INFO     | mean y: 2504175.743362832
[2026-03-09 14:04:21] 2026-03-09 18:03:33,117 | INFO     | intersect: 13096416938.891369
[2026-03-09 14:04:21] 2026-03-09 18:03:33,117 | INFO     | chi2: 2.200978051913821
[2026-03-09 14:04:21] 2026-03-09 18:03:33,117 | INFO     | current chi2=2.200978051913821 (change=6.2445380191621 %)
[2026-03-09 14:04:21] 2026-03-09 18:03:33,117 | INFO     | left removable region: 20
[2026-03-09 14:04:21] 2026-03-09 18:03:33,118 | INFO     | sum of square deviations: 2671341640.224392
[2026-03-09 14:04:21] 2026-03-09 18:03:33,127 | INFO     | sum of deviations: 9622540627.492682
[2026-03-09 14:04:21] 2026-03-09 18:03:33,127 | INFO     | mean x: 1773072491.4292684
[2026-03-09 14:04:21] 2026-03-09 18:03:33,127 | INFO     | mean y: 2536288.5512195122
[2026-03-09 14:04:21] 2026-03-09 18:03:33,127 | INFO     | intersect: -6384315107.526538
[2026-03-09 14:04:21] 2026-03-09 18:03:33,128 | INFO     | chi2: 0.0020713702563068736
[2026-03-09 14:04:21] 2026-03-09 18:03:33,128 | INFO     | current memory leak: 3.60 B/s (using 205 data points, chi2=0.00)
[2026-03-09 14:04:21] 2026-03-09 18:03:33,128 | INFO     | could have reported an average CPU frequency of 2642 MHz (11 samples)
[2026-03-09 14:04:21] 2026-03-09 18:03:33,129 | INFO     | ..............................
[2026-03-09 14:04:21] 2026-03-09 18:03:33,129 | INFO     | . Timing measurements:
[2026-03-09 14:04:21] 2026-03-09 18:03:33,129 | INFO     | . get job = 0 s
[2026-03-09 14:04:21] 2026-03-09 18:03:33,129 | INFO     | . initial setup = 32 s
[2026-03-09 14:04:21] 2026-03-09 18:03:33,129 | INFO     | . payload setup = 38 s
[2026-03-09 14:04:21] 2026-03-09 18:03:33,129 | INFO     | . stage-in = 0 s
[2026-03-09 14:04:21] 2026-03-09 18:03:33,129 | INFO     | . payload execution = 14383 s
[2026-03-09 14:04:21] 2026-03-09 18:03:33,129 | INFO     | . stage-out = 4 s
[2026-03-09 14:04:21] 2026-03-09 18:03:33,129 | INFO     | . log creation = 0 s
[2026-03-09 14:04:21] 2026-03-09 18:03:33,129 | INFO     | ..............................
[2026-03-09 14:04:21] 2026-03-09 18:03:33,375 | INFO     | 
[2026-03-09 14:04:21] 2026-03-09 18:03:33,375 | INFO     | job summary report
[2026-03-09 14:04:21] 2026-03-09 18:03:33,375 | INFO     | --------------------------------------------------
[2026-03-09 14:04:21] 2026-03-09 18:03:33,375 | INFO     | PanDA job id: 7035002114
[2026-03-09 14:04:21] 2026-03-09 18:03:33,376 | INFO     | task id: 48844944
[2026-03-09 14:04:21] 2026-03-09 18:03:33,376 | INFO     | errors: (none)
[2026-03-09 14:04:21] 2026-03-09 18:03:33,376 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 14:04:21] 2026-03-09 18:03:33,376 | INFO     | pilot state: finished 
[2026-03-09 14:04:21] 2026-03-09 18:03:33,376 | INFO     | transexitcode: 0
[2026-03-09 14:04:21] 2026-03-09 18:03:33,376 | INFO     | exeerrorcode: 0
[2026-03-09 14:04:21] 2026-03-09 18:03:33,376 | INFO     | exeerrordiag: 
[2026-03-09 14:04:21] 2026-03-09 18:03:33,376 | INFO     | exitcode: 0
[2026-03-09 14:04:21] 2026-03-09 18:03:33,376 | INFO     | exitmsg: OK
[2026-03-09 14:04:21] 2026-03-09 18:03:33,376 | INFO     | cpuconsumptiontime: 50946 s
[2026-03-09 14:04:21] 2026-03-09 18:03:33,376 | INFO     | nevents: 400
[2026-03-09 14:04:21] 2026-03-09 18:03:33,376 | INFO     | neventsw: 0
[2026-03-09 14:04:21] 2026-03-09 18:03:33,376 | INFO     | pid: 1713554
[2026-03-09 14:04:21] 2026-03-09 18:03:33,376 | INFO     | pgrp: 1713554
[2026-03-09 14:04:21] 2026-03-09 18:03:33,377 | INFO     | corecount: 8
[2026-03-09 14:04:21] 2026-03-09 18:03:33,377 | INFO     | event service: False
[2026-03-09 14:04:21] 2026-03-09 18:03:33,377 | INFO     | sizes: {0: 2279944, 1: 2243810, 2: 2280405, 13: 2280433, 14425: 2311150, 14426: 2311149, 14431: 2320525}
[2026-03-09 14:04:21] 2026-03-09 18:03:33,377 | INFO     | --------------------------------------------------
[2026-03-09 14:04:21] 2026-03-09 18:03:33,377 | INFO     | 
[2026-03-09 14:04:21] 2026-03-09 18:03:33,377 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-03-09 14:04:21] 2026-03-09 18:03:33,412 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 14:04:21] 2026-03-09 18:03:33,413 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 14:04:21] 2026-03-09 18:03:33,413 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 14:04:21] 2026-03-09 18:03:33,413 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 14:04:21] 2026-03-09 18:03:33,413 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 14:04:21] 2026-03-09 18:03:33,413 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 14:04:21] 2026-03-09 18:03:33,413 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 14:04:21] 2026-03-09 18:03:33,413 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 14:04:21] 2026-03-09 18:03:33,413 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 14:04:21] 2026-03-09 18:03:33,413 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 14:04:21] 2026-03-09 18:03:33,413 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 14:04:21] 2026-03-09 18:03:33,414 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 14:04:21] 2026-03-09 18:03:33,414 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 14:04:21] 2026-03-09 18:03:33,414 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 14:04:21] 2026-03-09 18:03:33,414 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 14:04:21] 2026-03-09 18:03:33,414 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 14:04:21] 2026-03-09 18:03:33,414 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 14:04:21] 2026-03-09 18:03:33,414 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 14:04:21] 2026-03-09 18:03:33,414 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 14:04:21] 2026-03-09 18:03:33,414 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 14:04:21] 2026-03-09 18:03:33,414 | INFO     | job 7035002114 has completed (purged errors)
[2026-03-09 14:04:21] 2026-03-09 18:03:33,414 | INFO     | overall cleanup function is called
[2026-03-09 14:04:21] 2026-03-09 18:03:34,438 | INFO     | --- collectZombieJob: --- 10, [1713554]
[2026-03-09 14:04:21] 2026-03-09 18:03:34,438 | INFO     | zombie collector waiting for pid 1713554
[2026-03-09 14:04:21] 2026-03-09 18:03:34,438 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 14:04:21] 2026-03-09 18:03:34,439 | INFO     | collected zombie processes
[2026-03-09 14:04:21] 2026-03-09 18:03:34,439 | INFO     | will attempt to kill all subprocesses of pid=1713554
[2026-03-09 14:04:21] 2026-03-09 18:03:36,191 | INFO     | process IDs to be killed: [1713554] (in reverse order)
[2026-03-09 14:04:21] 2026-03-09 18:03:36,426 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 14:04:21] 2026-03-09 18:03:36,426 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 14:04:21] 2026-03-09 18:03:36,448 | INFO     | did not find any defunct processes belonging to 1713554
[2026-03-09 14:04:21] 2026-03-09 18:03:36,470 | INFO     | did not find any defunct processes belonging to 1713554
[2026-03-09 14:04:21] 2026-03-09 18:03:36,470 | INFO     | ready for new job
[2026-03-09 14:04:21] 2026-03-09 18:03:36,471 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 14:04:21] 2026-03-09 18:03:36,472 | INFO     | **************************************
[2026-03-09 14:04:21] 2026-03-09 18:03:36,473 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 14:04:21] 2026-03-09 18:03:36,473 | INFO     | **************************************
[2026-03-09 14:04:21] 2026-03-09 18:03:36,473 | INFO     | 
[2026-03-09 14:04:21] 2026-03-09 18:03:36,478 | INFO     | architecture information:
[2026-03-09 14:04:21] 2026-03-09 18:03:36,493 | INFO     | executing command: cat /etc/os-release
[2026-03-09 14:04:21] 2026-03-09 18:03:36,543 | INFO     | cat /etc/os-release:
[2026-03-09 14:04:21] NAME="CentOS Linux"
[2026-03-09 14:04:21] VERSION="7 (Core)"
[2026-03-09 14:04:21] ID="centos"
[2026-03-09 14:04:21] ID_LIKE="rhel fedora"
[2026-03-09 14:04:21] VERSION_ID="7"
[2026-03-09 14:04:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 14:04:21] ANSI_COLOR="0;31"
[2026-03-09 14:04:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 14:04:21] HOME_URL="https://www.centos.org/"
[2026-03-09 14:04:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 14:04:21] 
[2026-03-09 14:04:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 14:04:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 14:04:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 14:04:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 14:04:21] 
[2026-03-09 14:04:21] 2026-03-09 18:03:36,544 | INFO     | **************************************
[2026-03-09 14:04:21] 2026-03-09 18:03:37,047 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-03-09 14:04:21] 2026-03-09 18:03:37,081 | INFO     | sufficient remaining disk space (92464480256 B)
[2026-03-09 14:04:21] 2026-03-09 18:03:37,081 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 14:04:21] 2026-03-09 18:03:37,081 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 14:04:21] 2026-03-09 18:03:37,081 | INFO     | update_server=False
[2026-03-09 14:04:21] 2026-03-09 18:03:37,081 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 14:04:21] 2026-03-09 18:03:37,281 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 14:04:21] 2026-03-09 18:03:37,281 | INFO     | aborting loop
[2026-03-09 14:04:21] 2026-03-09 18:03:37,967 | INFO     | all data control threads have been joined
[2026-03-09 14:04:21] 2026-03-09 18:03:38,087 | INFO     | [job] retrieve thread has finished
[2026-03-09 14:04:21] 2026-03-09 18:03:38,269 | INFO     | all payload control threads have been joined
[2026-03-09 14:04:21] 2026-03-09 18:03:38,298 | INFO     | [job] job monitor thread has finished
[2026-03-09 14:04:21] 2026-03-09 18:03:38,299 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 14:04:21] 2026-03-09 18:03:38,403 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 14:04:21] 2026-03-09 18:03:38,593 | INFO     | all job control threads have been joined
[2026-03-09 14:04:21] 2026-03-09 18:03:38,694 | INFO     | [payload] validate_post thread has finished
[2026-03-09 14:04:21] 2026-03-09 18:03:38,811 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 14:04:21] 2026-03-09 18:03:38,812 | INFO     | [job] validate thread has finished
[2026-03-09 14:04:21] 2026-03-09 18:03:38,812 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 14:04:21] 2026-03-09 18:03:38,973 | INFO     | [data] control thread has finished
[2026-03-09 14:04:21] 2026-03-09 18:03:39,043 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 14:04:21] 2026-03-09 18:03:39,275 | INFO     | [payload] control thread has finished
[2026-03-09 14:04:21] 2026-03-09 18:03:39,323 | INFO     | [data] copytool_in thread has finished
[2026-03-09 14:04:21] 2026-03-09 18:03:39,324 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 14:04:21] 2026-03-09 18:03:39,409 | INFO     | [job] queue monitor thread has finished
[2026-03-09 14:04:21] 2026-03-09 18:03:39,448 | INFO     | [payload] failed_post thread has finished
[2026-03-09 14:04:21] 2026-03-09 18:03:39,449 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 14:04:21] 2026-03-09 18:03:39,599 | INFO     | [job] control thread has finished
[2026-03-09 14:04:21] 2026-03-09 18:03:40,305 | INFO     | [data] copytool_out thread has finished
[2026-03-09 14:04:21] 2026-03-09 18:03:43,052 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 14:04:21] 2026-03-09 18:04:06,555 | INFO     | PID=1705527 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 14:04:21] 2026-03-09 18:04:06,556 | INFO     | .. there are 30 such processes running
[2026-03-09 14:04:21] 2026-03-09 18:04:06,556 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 14:04:21] 2026-03-09 18:04:06,556 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 14:04:21] 2026-03-09 18:04:06,556 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 14:04:21] 2026-03-09 18:04:13,626 | INFO     | [monitor] cgroup control has ended
[2026-03-09 14:04:21] 2026-03-09 18:04:15,332 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140172409665344)>', '<ExcThread(monitor, started 140171550910208)>']
[2026-03-09 14:04:21] 2026-03-09 18:04:15,610 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 14:04:21] 2026-03-09 18:04:15,610 | INFO     | [monitor] control thread has ended
[2026-03-09 14:04:21] 2026-03-09 18:04:20,373 | INFO     | all workflow threads have been joined
[2026-03-09 14:04:21] 2026-03-09 18:04:20,373 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 14:04:21] 2026-03-09 18:04:20,373 | INFO     | traces error code: 0
[2026-03-09 14:04:21] 2026-03-09 18:04:20,374 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 14:04:21] 2026-03-09 18:04:20,832 [wrapper] ==== pilot stdout END ====
[2026-03-09 14:04:21] 2026-03-09 18:04:20,835 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 14:04:21] 2026-03-09 18:04:20,839 [wrapper] pilotpid: 1705527
[2026-03-09 14:04:21] 2026-03-09 18:04:20,841 [wrapper] Pilot exit status: 0
[2026-03-09 14:04:21] 2026-03-09 18:04:20,893 [wrapper] pandaids: 7035002114
[2026-03-09 14:04:21] 2026-03-09 18:04:21,014 [wrapper] cleanup supervisor_pilot 2771750 1705528
[2026-03-09 14:04:21] 2026-03-09 18:04:21,018 [wrapper] Test setup, not cleaning
[2026-03-09 14:04:21] 2026-03-09 18:04:21,023 [wrapper] apfmon messages muted
[2026-03-09 14:04:21] 2026-03-09 18:04:21,093 [wrapper] ==== wrapper stdout END ====
[2026-03-09 14:04:21] 2026-03-09 18:04:21,122 [wrapper] ==== wrapper stderr END ====
[2026-03-09 14:04:21]  *** Error codes and diagnostics ***
[2026-03-09 14:04:21]     "exeErrorCode": 0,
[2026-03-09 14:04:21]     "exeErrorDiag": "",
[2026-03-09 14:04:21]     "pilotErrorCode": 0,
[2026-03-09 14:04:21]     "pilotErrorDiag": "",
[2026-03-09 14:04:21]  *** Listing of results directory ***
[2026-03-09 14:04:21] total 445664
[2026-03-09 14:04:21] -rwx------. 1 boincer umatlas     36322 Mar  1 07:02 runpilot2-wrapper.sh
[2026-03-09 14:04:21] -rw-r--r--. 1 boincer umatlas    584627 Mar  1 07:02 pilot3.tar.gz
[2026-03-09 14:04:21] -rw-r--r--. 1 boincer umatlas      5111 Mar  1 07:03 queuedata.json
[2026-03-09 14:04:21] -rw-r--r--. 1 boincer umatlas       100 Mar  9 10:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 14:04:21] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  9 10:01 run_atlas
[2026-03-09 14:04:21] -rw-r--r--. 1 boincer umatlas       105 Mar  9 10:01 job.xml
[2026-03-09 14:04:21] -rw-r--r--. 2 boincer umatlas 252183750 Mar  9 10:01 EVNT.48454723._000002.pool.root.1
[2026-03-09 14:04:21] -rw-r--r--. 2 boincer umatlas     15845 Mar  9 10:01 start_atlas.sh
[2026-03-09 14:04:21] drwxrwx--x. 2 boincer umatlas      4096 Mar  9 10:01 shared
[2026-03-09 14:04:21] -rw-r--r--. 2 boincer umatlas    597988 Mar  9 10:01 input.tar.gz
[2026-03-09 14:04:21] -rw-r--r--. 1 boincer umatlas         0 Mar  9 10:01 boinc_lockfile
[2026-03-09 14:04:21] -rw-r--r--. 1 boincer umatlas      2686 Mar  9 10:01 pandaJob.out
[2026-03-09 14:04:21] -rw-------. 1 boincer umatlas        57 Mar  9 10:01 setup.sh.local
[2026-03-09 14:04:21] -rw-------. 1 boincer umatlas    990728 Mar  9 10:02 agis_schedconf.cvmfs.json
[2026-03-09 14:04:21] -rw-------. 1 boincer umatlas       443 Mar  9 10:02 workernode_map.json
[2026-03-09 14:04:21] drwx------. 5 boincer umatlas      4096 Mar  9 10:02 pilot3
[2026-03-09 14:04:21] -rw-------. 1 boincer umatlas 195673251 Mar  9 14:00 HITS.48844944._000033.pool.root.1
[2026-03-09 14:04:21] -rw-r--r--. 1 boincer umatlas       531 Mar  9 14:00 boinc_task_state.xml
[2026-03-09 14:04:21] -rw-r--r--. 1 boincer umatlas      6877 Mar  9 14:00 init_data.xml
[2026-03-09 14:04:21] -rw-------. 1 boincer umatlas        95 Mar  9 14:03 pilot_heartbeat.json
[2026-03-09 14:04:21] -rw-------. 1 boincer umatlas      1043 Mar  9 14:03 memory_monitor_summary.json
[2026-03-09 14:04:21] -rw-------. 1 boincer umatlas   1511578 Mar  9 14:03 agis_ddmendpoints.agis.ALL.json
[2026-03-09 14:04:21] -rw-------. 1 boincer umatlas    452189 Mar  9 14:03 log.48844944._000033.job.log.tgz.1
[2026-03-09 14:04:21] -rw-------. 1 boincer umatlas      6389 Mar  9 14:03 heartbeat.json
[2026-03-09 14:04:21] -rw-r--r--. 1 boincer umatlas      8192 Mar  9 14:04 boinc_mmap_file
[2026-03-09 14:04:21] -rw-r--r--. 1 boincer umatlas        28 Mar  9 14:04 wrapper_checkpoint.txt
[2026-03-09 14:04:21] -rw-------. 1 boincer umatlas      4820 Mar  9 14:04 pilotlog.txt
[2026-03-09 14:04:21] -rw-------. 1 boincer umatlas   1837893 Mar  9 14:04 log.48844944._000033.job.log.1
[2026-03-09 14:04:21] -rw-------. 1 boincer umatlas       357 Mar  9 14:04 output.list
[2026-03-09 14:04:21] -rw-r--r--. 1 boincer umatlas       620 Mar  9 14:04 runtime_log
[2026-03-09 14:04:21] -rw-------. 1 boincer umatlas   2304000 Mar  9 14:04 result.tar.gz
[2026-03-09 14:04:21] -rw-r--r--. 1 boincer umatlas      9347 Mar  9 14:04 runtime_log.err
[2026-03-09 14:04:21] -rw-------. 1 boincer umatlas       656 Mar  9 14:04 3z1KDmWguG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmF49KDmLFV3Nm.diag
[2026-03-09 14:04:21] -rw-r--r--. 1 boincer umatlas     21140 Mar  9 14:04 stderr.txt
[2026-03-09 14:04:21] HITS file was successfully produced:
[2026-03-09 14:04:21] -rw-------. 1 boincer umatlas 195673251 Mar  9 14:00 shared/HITS.pool.root.1
[2026-03-09 14:04:21]  *** Contents of shared directory: ***
[2026-03-09 14:04:21] total 440224
[2026-03-09 14:04:21] -rw-r--r--. 2 boincer umatlas 252183750 Mar  9 10:01 ATLAS.root_0
[2026-03-09 14:04:21] -rw-r--r--. 2 boincer umatlas     15845 Mar  9 10:01 start_atlas.sh
[2026-03-09 14:04:21] -rw-r--r--. 2 boincer umatlas    597988 Mar  9 10:01 input.tar.gz
[2026-03-09 14:04:21] -rw-------. 1 boincer umatlas 195673251 Mar  9 14:00 HITS.pool.root.1
[2026-03-09 14:04:21] -rw-------. 1 boincer umatlas   2304000 Mar  9 14:04 result.tar.gz
14:04:43 (1700223): run_atlas exited; CPU time 51649.889398
14:04:43 (1700223): called boinc_finish(0)

</stderr_txt>
]]>

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