Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-09 22:16:00 (71405): vboxwrapper version 26210
2026-03-09 22:16:00 (71405): BOINC client version: 8.2.5
2026-03-09 22:16:00 (71405): Detected: VirtualBox VboxManage Interface (Version: 7.2.6)
2026-03-09 22:16:00 (71405): Detected: Sandbox Configuration Enabled
2026-03-09 22:16:00 (71405): Successfully copied 'init_data.xml' to the shared directory.
2026-03-09 22:16:00 (71405): Create VM. (boinc_8479491bc963500c, slot#0)
2026-03-09 22:16:00 (71405): Setting Memory Size for VM. (4300MB)
2026-03-09 22:16:00 (71405): Setting CPU Count for VM. (3)
2026-03-09 22:16:00 (71405): Setting Chipset Options for VM.
2026-03-09 22:16:01 (71405): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-09 22:16:01 (71405): Setting Boot Options for VM.
2026-03-09 22:16:01 (71405): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-09 22:16:01 (71405): Enabling VM Network Access.
2026-03-09 22:16:01 (71405): Disabling USB Support for VM.
2026-03-09 22:16:01 (71405): Disabling COM Port Support for VM.
2026-03-09 22:16:01 (71405): Disabling Audio Support for VM.
2026-03-09 22:16:01 (71405): Disabling Clipboard Support for VM.
2026-03-09 22:16:01 (71405): Disabling Drag and Drop Support for VM.
2026-03-09 22:16:01 (71405): Adding storage controller(s) to VM.
2026-03-09 22:16:01 (71405): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-09 22:16:02 (71405): Adding VirtualBox Guest Additions to VM.
2026-03-09 22:16:02 (71405): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-09 22:16:02 (71405): forwarding host port 54532 to guest port 80
2026-03-09 22:16:02 (71405): Enabling remote desktop for VM.
2026-03-09 22:16:02 (71405): Required extension pack not installed, remote desktop not enabled.
2026-03-09 22:16:02 (71405): Enabling shared directory for VM.
2026-03-09 22:16:02 (71405): Starting VM using VBoxManage interface. (boinc_8479491bc963500c, slot#0)
2026-03-09 22:16:07 (71405): Successfully started VM. (PID = '71482')
2026-03-09 22:16:07 (71405): Reporting VM Process ID to BOINC.
2026-03-09 22:16:07 (71405): Guest Log: BIOS: VirtualBox 7.2.6
2026-03-09 22:16:07 (71405): Guest Log: CPUID EDX: 0x178bfbff
2026-03-09 22:16:07 (71405): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-09 22:16:07 (71405): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-09 22:16:07 (71405): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-09 22:16:07 (71405): Detected: Web Application Enabled (http://localhost:54532)
2026-03-09 22:16:07 (71405): Preference change detected
2026-03-09 22:16:07 (71405): Setting CPU throttle for VM. (25%)
2026-03-09 22:16:07 (71405): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-09 22:16:09 (71405): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-09 22:16:09 (71405): Guest Log: BIOS: Booting from Hard Disk...
2026-03-09 22:16:15 (71405): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-09 22:16:15 (71405): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-09 22:16:15 (71405): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-09 22:16:15 (71405): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-09 22:16:15 (71405): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-09 22:16:15 (71405): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-09 22:16:15 (71405): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-09 22:16:15 (71405): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-09 22:16:15 (71405): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-09 22:16:15 (71405): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-09 22:16:15 (71405): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-09 22:16:15 (71405): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-09 22:16:15 (71405): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-09 22:16:15 (71405): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-09 22:16:15 (71405): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-09 22:16:15 (71405): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-09 22:16:15 (71405): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-09 22:16:15 (71405): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-09 22:16:15 (71405): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-09 22:16:15 (71405): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-09 22:16:15 (71405): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-09 22:16:15 (71405): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-09 22:16:15 (71405): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-09 22:16:15 (71405): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-09 22:16:15 (71405): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-09 22:16:15 (71405): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-09 22:16:15 (71405): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-09 22:16:15 (71405): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-09 22:16:15 (71405): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-09 22:16:15 (71405): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-09 22:16:15 (71405): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-09 22:16:15 (71405): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-09 22:16:37 (71405): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-09 22:16:37 (71405): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-09 22:17:03 (71405): VM state change detected. (old = 'running', new = 'paused')
2026-03-09 22:17:05 (71405): VM state change detected. (old = 'paused', new = 'running')
2026-03-09 22:17:27 (71405): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-09 22:17:27 (71405): Guest Log: 00:00:00.000180 main     Log opened 2026-03-09T21:17:22.273244000Z
2026-03-09 22:17:27 (71405): Guest Log: 00:00:00.000361 main     OS Product: Linux
2026-03-09 22:17:27 (71405): Guest Log: 00:00:00.000429 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-09 22:17:27 (71405): Guest Log: 00:00:00.000492 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-09 22:17:27 (71405): Guest Log: 00:00:00.000561 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-09 22:17:27 (71405): Guest Log: 00:00:00.000563 main     Process ID: 1297
2026-03-09 22:17:27 (71405): Guest Log: 00:00:00.000564 main     Package type: LINUX_64BITS_GENERIC
2026-03-09 22:17:27 (71405): Guest Log: 00:00:00.006470 main     5.2.32 r132073 started. Verbose level = 0
2026-03-09 22:17:28 (71405): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-09 22:17:28 (71405): Guest Log: [INFO] Mounting shared directory
2026-03-09 22:17:28 (71405): Guest Log: [INFO] Checking for init_data.xml
2026-03-09 22:17:36 (71405): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-09 22:17:36 (71405): Guest Log: [INFO] Detected branch: prod
2026-03-09 22:17:36 (71405): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-09 22:17:36 (71405): Guest Log: Copying input files
2026-03-09 22:17:46 (71405): Guest Log: Copied input files into RunAtlas.
2026-03-09 22:17:46 (71405): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-09 22:17:46 (71405): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-09 22:17:46 (71405): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-09 22:17:46 (71405): Guest Log: Further information can be found at the LHC@home message board.
2026-03-09 22:17:56 (71405): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-09 22:17:57 (71405): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-09 22:17:57 (71405): Guest Log: 2.6.3.0 1574 0 32168 157090 3 1 3117743 4096001 0 65024 0 0 n/a 1 1 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-09 22:18:01 (71405): Guest Log: copied the webapp to /var/www
2026-03-09 22:18:01 (71405): Guest Log: ATHENA_PROC_NUMBER=3
2026-03-09 22:18:01 (71405): Guest Log: ATHENA_CORE_NUMBER=3
2026-03-09 22:18:01 (71405): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-09 22:18:02 (71405): Guest Log:  *** Starting ATLAS job. (PandaID=7034858243 taskID=48700922) ***
2026-03-09 23:55:34 (71405): Status Report: Elapsed Time: '6000.000000'
2026-03-09 23:55:34 (71405): Status Report: CPU Time: '11464.870000'
2026-03-10 00:48:21 (71405): Preference change detected
2026-03-10 00:48:21 (71405): Setting CPU throttle for VM. (25%)
2026-03-10 00:48:21 (71405): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-10 01:06:55 (71405): Guest Log:  *** Job finished ***
2026-03-10 01:06:55 (71405): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-10 01:06:55 (71405): Guest Log: 2026-03-10 00:06:07,388 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-10 01:06:55 (71405): Guest Log: 2026-03-10 00:06:07,388 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-10 01:06:55 (71405): Guest Log: 2026-03-10 00:06:20,756 | INFO     | [monitor] cgroup control has ended
2026-03-10 01:06:55 (71405): Guest Log: 2026-03-10 00:06:22,180 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140258789660480)>', '<ExcThread(monitor, started 140257450256128)>']
2026-03-10 01:06:55 (71405): Guest Log: 2026-03-10 00:06:22,457 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-10 01:06:55 (71405): Guest Log: 2026-03-10 00:06:22,457 | INFO     | [monitor] control thread has ended
2026-03-10 01:06:56 (71405): Guest Log: 2026-03-10 00:06:27,185 | INFO     | all workflow threads have been joined
2026-03-10 01:06:56 (71405): Guest Log: 2026-03-10 00:06:27,185 | INFO     | end of generic workflow (traces error code: 0)
2026-03-10 01:06:56 (71405): Guest Log: 2026-03-10 00:06:27,186 | INFO     | traces error code: 0
2026-03-10 01:06:56 (71405): Guest Log: 2026-03-10 00:06:27,186 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-10 01:06:56 (71405): Guest Log: 2026-03-10 00:06:27,441 [wrapper] ==== pilot stdout END ====
2026-03-10 01:06:56 (71405): Guest Log: 2026-03-10 00:06:27,449 [wrapper] ==== wrapper stdout RESUME ====
2026-03-10 01:06:56 (71405): Guest Log: 2026-03-10 00:06:27,456 [wrapper] pilotpid: 5970
2026-03-10 01:06:56 (71405): Guest Log: 2026-03-10 00:06:27,461 [wrapper] Pilot exit status: 0
2026-03-10 01:06:56 (71405): Guest Log: 2026-03-10 00:06:27,650 [wrapper] pandaids: 7034858243
2026-03-10 01:06:56 (71405): Guest Log: 2026-03-10 00:06:27,760 [wrapper] cleanup supervisor_pilot 27097 5971
2026-03-10 01:06:56 (71405): Guest Log: 2026-03-10 00:06:27,768 [wrapper] Test setup, not cleaning
2026-03-10 01:06:56 (71405): Guest Log: 2026-03-10 00:06:27,820 [wrapper] apfmon messages muted
2026-03-10 01:06:56 (71405): Guest Log: 2026-03-10 00:06:27,827 [wrapper] ==== wrapper stdout END ====
2026-03-10 01:06:56 (71405): Guest Log: 2026-03-10 00:06:27,834 [wrapper] ==== wrapper stderr END ====
2026-03-10 01:06:56 (71405): Guest Log:  *** Error codes and diagnostics ***
2026-03-10 01:06:56 (71405): Guest Log:     "exeErrorCode": 0,
2026-03-10 01:06:56 (71405): Guest Log:     "exeErrorDiag": "",
2026-03-10 01:06:56 (71405): Guest Log:     "pilotErrorCode": 0,
2026-03-10 01:06:56 (71405): Guest Log:     "pilotErrorDiag": "",
2026-03-10 01:06:56 (71405): Guest Log:  *** Listing of results directory ***
2026-03-10 01:06:56 (71405): Guest Log: total 150280
2026-03-10 01:06:56 (71405): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  1 10:58 pilot3.tar.gz
2026-03-10 01:06:56 (71405): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  1 11:08 runpilot2-wrapper.sh
2026-03-10 01:06:56 (71405): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  1 11:11 queuedata.json
2026-03-10 01:06:56 (71405): Guest Log: -rw-r-----. 1 atlas atlas     15845 Mar  9 21:17 start_atlas.sh
2026-03-10 01:06:56 (71405): Guest Log: -rw-r-----. 1 atlas atlas    597935 Mar  9 21:17 input.tar.gz
2026-03-10 01:06:56 (71405): Guest Log: -rw-r--r--. 1 atlas atlas      7540 Mar  9 21:17 init_data.xml
2026-03-10 01:06:56 (71405): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  9 21:17 EVNT.48700920._000107.pool.root.1 -> /data/./ATLAS.root_0
2026-03-10 01:06:56 (71405): Guest Log: -rw-r--r--. 1 atlas atlas      2517 Mar  9 21:17 pandaJob.out
2026-03-10 01:06:56 (71405): Guest Log: -rw-------. 1 atlas atlas   1002738 Mar  9 21:19 agis_schedconf.cvmfs.json
2026-03-10 01:06:56 (71405): Guest Log: -rw-------. 1 atlas atlas   1511578 Mar  9 21:19 agis_ddmendpoints.agis.ALL.json
2026-03-10 01:06:56 (71405): Guest Log: -rw-------. 1 atlas atlas       427 Mar  9 21:20 workernode_map.json
2026-03-10 01:06:56 (71405): Guest Log: drwx------. 5 atlas atlas      4096 Mar  9 21:20 pilot3
2026-03-10 01:06:56 (71405): Guest Log: -rw-------. 1 atlas atlas 146684387 Mar 10 00:04 HITS.48700922._002686.pool.root.1
2026-03-10 01:06:56 (71405): Guest Log: -rw-------. 1 atlas atlas      1031 Mar 10 00:05 memory_monitor_summary.json
2026-03-10 01:06:56 (71405): Guest Log: -rw-------. 1 atlas atlas    320312 Mar 10 00:05 log.48700922._002686.job.log.tgz.1
2026-03-10 01:06:56 (71405): Guest Log: -rw-------. 1 atlas atlas      6375 Mar 10 00:05 heartbeat.json
2026-03-10 01:06:56 (71405): Guest Log: -rw-------. 1 atlas atlas        95 Mar 10 00:05 pilot_heartbeat.json
2026-03-10 01:06:56 (71405): Guest Log: -rw-------. 1 atlas atlas      4873 Mar 10 00:06 pilotlog.txt
2026-03-10 01:06:56 (71405): Guest Log: -rw-------. 1 atlas atlas   1349348 Mar 10 00:06 log.48700922._002686.job.log.1
2026-03-10 01:06:56 (71405): Guest Log: -rw-------. 1 atlas atlas       357 Mar 10 00:06 output.list
2026-03-10 01:06:56 (71405): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 10 00:06 runtime_log
2026-03-10 01:06:56 (71405): Guest Log: -rw-------. 1 atlas atlas   1689600 Mar 10 00:06 result.tar.gz
2026-03-10 01:06:56 (71405): Guest Log: -rw-r--r--. 1 atlas atlas      8779 Mar 10 00:06 runtime_log.err
2026-03-10 01:06:56 (71405): Guest Log: -rw-------. 1 atlas atlas       666 Mar 10 00:06 O5rMDmMqtG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmg97KDmC13qfn.diag
2026-03-10 01:06:56 (71405): Guest Log: Looking for outputfile HITS.48700922._002686.pool.root.1
2026-03-10 01:06:56 (71405): Guest Log: HITS file was successfully produced
2026-03-10 01:06:56 (71405): Guest Log: -rw-------. 1 atlas atlas 146684387 Mar 10 00:04 /home/atlas/RunAtlas/HITS.48700922._002686.pool.root.1
2026-03-10 01:06:56 (71405): Guest Log: Successfully finished the ATLAS job!
2026-03-10 01:06:56 (71405): Guest Log: Copying the results back to the shared directory!
2026-03-10 01:06:57 (71405): Guest Log:  *** Contents of shared directory: ***
2026-03-10 01:06:57 (71405): Guest Log: total 185268
2026-03-10 01:06:57 (71405): Guest Log: -rw-rw----. 1 root root 187396668 Mar  9 21:15 ATLAS.root_0
2026-03-10 01:06:57 (71405): Guest Log: -rw-rw-r--. 1 root root      7540 Mar  9 21:16 init_data.xml
2026-03-10 01:06:57 (71405): Guest Log: -rw-rw----. 1 root root    597935 Mar  9 21:15 input.tar.gz
2026-03-10 01:06:57 (71405): Guest Log: -rw-r--r--. 1 root root   1689600 Mar 10  2026 result.tar.gz
2026-03-10 01:06:57 (71405): Guest Log: -rw-rw----. 1 root root     15845 Mar  9 21:16 start_atlas.sh
2026-03-10 01:06:57 (71405): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-10 01:06:57 (71405): VM Completion File Detected.
2026-03-10 01:06:57 (71405): Powering off VM.
2026-03-10 01:06:57 (71405): Successfully stopped VM.
2026-03-10 01:06:57 (71405): Deregistering VM. (boinc_8479491bc963500c, slot#0)
2026-03-10 01:06:57 (71405): Removing network bandwidth throttle group from VM.
2026-03-10 01:06:57 (71405): Removing VM from VirtualBox.
2026-03-10 01:07:03 (71405): called boinc_finish(0)

</stderr_txt>
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