Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:09:41 (874636): wrapper (7.7.26015): starting
20:09:41 (874636): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 20:09:41] Arguments: --nthreads 4
[2026-03-09 20:09:41] Threads: 4
[2026-03-09 20:09:41] Checking for CVMFS
[2026-03-09 20:09:41] No cvmfs_config command found, will try listing directly
[2026-03-09 20:09:41] CVMFS is ok
[2026-03-09 20:09:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 20:09:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 20:09:41] Further information can be found at the LHC@home message board.
[2026-03-09 20:09:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 20:09:41] Checking for apptainer binary...
[2026-03-09 20:09:41] which: no apptainer in ((null))
[2026-03-09 20:09:41] apptainer is not installed, using version from CVMFS
[2026-03-09 20:09:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 20:09:41] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot36/slots/9/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-03-09 20:09:41] apptainer works
[2026-03-09 20:09:41] Set ATHENA_PROC_NUMBER=4
[2026-03-09 20:09:41] Set ATHENA_CORE_NUMBER=4
[2026-03-09 20:09:41] Starting ATLAS job with PandaID=7040861055
[2026-03-09 20:09:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot36/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 21:28:23]  *** The last 200 lines of the pilot log: ***
[2026-03-09 21:28:23]  filesize=276274
[2026-03-09 21:28:23]  filetype=log
[2026-03-09 21:28:23]  guid=fe349c86-12e6-45b1-8ca2-657dbfa66c3b
[2026-03-09 21:28:23]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-09 21:28:23]  is_altstaged=None
[2026-03-09 21:28:23]  is_tar=False
[2026-03-09 21:28:23]  lfn=log.48955010._018220.job.log.tgz.1
[2026-03-09 21:28:23]  mtime=0
[2026-03-09 21:28:23]  protocol_id=None
[2026-03-09 21:28:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-09 21:28:23]  replicas=None
[2026-03-09 21:28:23]  scope=mc23_13p6TeV
[2026-03-09 21:28:23]  status=None
[2026-03-09 21:28:23]  status_code=0
[2026-03-09 21:28:23]  storage_token=
[2026-03-09 21:28:23]  surl=/var/lib/boinc/var/slot36/slots/9/PanDA_Pilot-7040861055/log.48955010._018220.job.log.tgz.1
[2026-03-09 21:28:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/27/79/log.48955010._018220.job.log.tgz.1
[2026-03-09 21:28:23]  workdir=None
[2026-03-09 21:28:23] ]
[2026-03-09 21:28:23] 2026-03-09 20:27:48,462 | INFO     | transferring file log.48955010._018220.job.log.tgz.1 from /var/lib/boinc/var/slot36/slots/9/PanDA_Pilot-7040861055/log.48955010._018220.job.log.tgz.1 to /var/lib/b
[2026-03-09 21:28:23] 2026-03-09 20:27:48,462 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot36/slots/9/PanDA_Pilot-7040861055/log.48955010._018220.job.log.tgz.1 /var/lib/boinc/var/slot36/slots/9/lo
[2026-03-09 21:28:23] 2026-03-09 20:27:48,481 | INFO     | adding to output.list: log.48955010._018220.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/27/79/log.48955010._018220.job.log.tg
[2026-03-09 21:28:23] 2026-03-09 20:27:48,482 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-09 21:28:23] 2026-03-09 20:27:48,482 | INFO     | summary of transferred files:
[2026-03-09 21:28:23] 2026-03-09 20:27:48,482 | INFO     |  -- lfn=log.48955010._018220.job.log.tgz.1, status_code=0, status=transferred
[2026-03-09 21:28:23] 2026-03-09 20:27:48,482 | INFO     | stage-out finished correctly
[2026-03-09 21:28:23] 2026-03-09 20:27:48,540 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-09 21:28:23] 2026-03-09 20:27:48,936 | INFO     | job 7040861055 has state=finished
[2026-03-09 21:28:23] 2026-03-09 20:27:48,936 | INFO     | preparing for final server update for job 7040861055 in state='finished'
[2026-03-09 21:28:23] 2026-03-09 20:27:48,936 | INFO     | reading metadata from: /var/lib/boinc/var/slot36/slots/9/PanDA_Pilot-7040861055/jobReport.json
[2026-03-09 21:28:23] 2026-03-09 20:27:48,938 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot36/slots/9/workernode_map.json
[2026-03-09 21:28:23] 2026-03-09 20:27:48,938 | INFO     | this job has now completed (state=finished)
[2026-03-09 21:28:23] 2026-03-09 20:27:48,938 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 21:28:23] 2026-03-09 20:27:48,938 | INFO     | log transfer has been attempted: DONE
[2026-03-09 21:28:23] 2026-03-09 20:27:48,938 | INFO     | job 7040861055 has finished - writing final server update
[2026-03-09 21:28:23] 2026-03-09 20:27:48,938 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2488220/.job.ad'
[2026-03-09 21:28:23] 2026-03-09 20:27:48,938 | INFO     | total number of processed events: 400 (read)
[2026-03-09 21:28:23] 2026-03-09 20:27:48,960 | INFO     | using path: /var/lib/boinc/var/slot36/slots/9/PanDA_Pilot-7040861055/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 21:28:23] 2026-03-09 20:27:48,960 | INFO     | extracted standard info from prmon json
[2026-03-09 21:28:23] 2026-03-09 20:27:48,961 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 21:28:23] 2026-03-09 20:27:48,961 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 21:28:23] 2026-03-09 20:27:48,961 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 21:28:23] 2026-03-09 20:27:48,961 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 21:28:23] 2026-03-09 20:27:48,962 | INFO     | fitting pss+swap vs Time
[2026-03-09 21:28:23] 2026-03-09 20:27:48,962 | INFO     | sum of square deviations: 106336877.5
[2026-03-09 21:28:23] 2026-03-09 20:27:48,962 | INFO     | sum of deviations: 490643099.5
[2026-03-09 21:28:23] 2026-03-09 20:27:48,962 | INFO     | mean x: 1773085822.5
[2026-03-09 21:28:23] 2026-03-09 20:27:48,962 | INFO     | mean y: 2324845.9285714286
[2026-03-09 21:28:23] 2026-03-09 20:27:48,962 | INFO     | intersect: -8178772286.916116
[2026-03-09 21:28:23] 2026-03-09 20:27:48,962 | INFO     | chi2: 0.0006633340987198789
[2026-03-09 21:28:23] 2026-03-09 20:27:48,963 | INFO     | current memory leak: 4.61 B/s (using 70 data points, chi2=0.00)
[2026-03-09 21:28:23] 2026-03-09 20:27:48,963 | INFO     | could have reported an average CPU frequency of 3578 MHz (6 samples)
[2026-03-09 21:28:23] 2026-03-09 20:27:48,963 | INFO     | ..............................
[2026-03-09 21:28:23] 2026-03-09 20:27:48,963 | INFO     | . Timing measurements:
[2026-03-09 21:28:23] 2026-03-09 20:27:48,963 | INFO     | . get job = 0 s
[2026-03-09 21:28:23] 2026-03-09 20:27:48,963 | INFO     | . initial setup = 4 s
[2026-03-09 21:28:23] 2026-03-09 20:27:48,963 | INFO     | . payload setup = 4 s
[2026-03-09 21:28:23] 2026-03-09 20:27:48,963 | INFO     | . stage-in = 0 s
[2026-03-09 21:28:23] 2026-03-09 20:27:48,963 | INFO     | . payload execution = 4655 s
[2026-03-09 21:28:23] 2026-03-09 20:27:48,963 | INFO     | . stage-out = 0 s
[2026-03-09 21:28:23] 2026-03-09 20:27:48,963 | INFO     | . log creation = 0 s
[2026-03-09 21:28:23] 2026-03-09 20:27:48,963 | INFO     | ..............................
[2026-03-09 21:28:23] 2026-03-09 20:27:48,986 | INFO     | time since job start (4676s) is within the limit (349056.0s)
[2026-03-09 21:28:23] 2026-03-09 20:27:49,422 | INFO     | 
[2026-03-09 21:28:23] 2026-03-09 20:27:49,422 | INFO     | job summary report
[2026-03-09 21:28:23] 2026-03-09 20:27:49,422 | INFO     | --------------------------------------------------
[2026-03-09 21:28:23] 2026-03-09 20:27:49,422 | INFO     | PanDA job id: 7040861055
[2026-03-09 21:28:23] 2026-03-09 20:27:49,422 | INFO     | task id: 48955010
[2026-03-09 21:28:23] 2026-03-09 20:27:49,422 | INFO     | errors: (none)
[2026-03-09 21:28:23] 2026-03-09 20:27:49,422 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 21:28:23] 2026-03-09 20:27:49,422 | INFO     | pilot state: finished 
[2026-03-09 21:28:23] 2026-03-09 20:27:49,422 | INFO     | transexitcode: 0
[2026-03-09 21:28:23] 2026-03-09 20:27:49,422 | INFO     | exeerrorcode: 0
[2026-03-09 21:28:23] 2026-03-09 20:27:49,422 | INFO     | exeerrordiag: 
[2026-03-09 21:28:23] 2026-03-09 20:27:49,422 | INFO     | exitcode: 0
[2026-03-09 21:28:23] 2026-03-09 20:27:49,422 | INFO     | exitmsg: OK
[2026-03-09 21:28:23] 2026-03-09 20:27:49,422 | INFO     | cpuconsumptiontime: 17876 s
[2026-03-09 21:28:23] 2026-03-09 20:27:49,422 | INFO     | nevents: 400
[2026-03-09 21:28:23] 2026-03-09 20:27:49,422 | INFO     | neventsw: 0
[2026-03-09 21:28:23] 2026-03-09 20:27:49,422 | INFO     | pid: 913135
[2026-03-09 21:28:23] 2026-03-09 20:27:49,422 | INFO     | pgrp: 913135
[2026-03-09 21:28:23] 2026-03-09 20:27:49,422 | INFO     | corecount: 4
[2026-03-09 21:28:23] 2026-03-09 20:27:49,422 | INFO     | event service: False
[2026-03-09 21:28:23] 2026-03-09 20:27:49,423 | INFO     | sizes: {0: 2280188, 11: 2280188, 4663: 2306444, 4664: 2315519, 4665: 2315657}
[2026-03-09 21:28:23] 2026-03-09 20:27:49,423 | INFO     | --------------------------------------------------
[2026-03-09 21:28:23] 2026-03-09 20:27:49,423 | INFO     | 
[2026-03-09 21:28:23] 2026-03-09 20:27:49,423 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot36/slots/9
[2026-03-09 21:28:23] 2026-03-09 20:27:49,447 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 21:28:23] 2026-03-09 20:27:49,447 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 21:28:23] 2026-03-09 20:27:49,447 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 21:28:23] 2026-03-09 20:27:49,447 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 21:28:23] 2026-03-09 20:27:49,447 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 21:28:23] 2026-03-09 20:27:49,447 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 21:28:23] 2026-03-09 20:27:49,447 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 21:28:23] 2026-03-09 20:27:49,447 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 21:28:23] 2026-03-09 20:27:49,447 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 21:28:23] 2026-03-09 20:27:49,448 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 21:28:23] 2026-03-09 20:27:49,448 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 21:28:23] 2026-03-09 20:27:49,448 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 21:28:23] 2026-03-09 20:27:49,448 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 21:28:23] 2026-03-09 20:27:49,448 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 21:28:23] 2026-03-09 20:27:49,448 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 21:28:23] 2026-03-09 20:27:49,448 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 21:28:23] 2026-03-09 20:27:49,448 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 21:28:23] 2026-03-09 20:27:49,448 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 21:28:23] 2026-03-09 20:27:49,448 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 21:28:23] 2026-03-09 20:27:49,448 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 21:28:23] 2026-03-09 20:27:49,448 | INFO     | job 7040861055 has completed (purged errors)
[2026-03-09 21:28:23] 2026-03-09 20:27:49,448 | INFO     | overall cleanup function is called
[2026-03-09 21:28:23] 2026-03-09 20:27:50,455 | INFO     | --- collectZombieJob: --- 10, [913135]
[2026-03-09 21:28:23] 2026-03-09 20:27:50,455 | INFO     | zombie collector waiting for pid 913135
[2026-03-09 21:28:23] 2026-03-09 20:27:50,455 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 21:28:23] 2026-03-09 20:27:50,455 | INFO     | collected zombie processes
[2026-03-09 21:28:23] 2026-03-09 20:27:50,455 | INFO     | will attempt to kill all subprocesses of pid=913135
[2026-03-09 21:28:23] 2026-03-09 20:27:50,927 | INFO     | process IDs to be killed: [913135] (in reverse order)
[2026-03-09 21:28:23] 2026-03-09 20:27:51,174 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 21:28:23] 2026-03-09 20:27:51,174 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 21:28:23] 2026-03-09 20:27:51,203 | INFO     | did not find any defunct processes belonging to 913135
[2026-03-09 21:28:23] 2026-03-09 20:27:51,227 | INFO     | did not find any defunct processes belonging to 913135
[2026-03-09 21:28:23] 2026-03-09 20:27:51,228 | INFO     | ready for new job
[2026-03-09 21:28:23] 2026-03-09 20:27:51,228 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 21:28:23] 2026-03-09 20:27:51,229 | INFO     | **************************************
[2026-03-09 21:28:23] 2026-03-09 20:27:51,229 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 21:28:23] 2026-03-09 20:27:51,229 | INFO     | **************************************
[2026-03-09 21:28:23] 2026-03-09 20:27:51,229 | INFO     | 
[2026-03-09 21:28:23] 2026-03-09 20:27:51,236 | INFO     | architecture information:
[2026-03-09 21:28:23] 2026-03-09 20:27:51,236 | INFO     | executing command: cat /etc/os-release
[2026-03-09 21:28:23] 2026-03-09 20:27:51,257 | INFO     | cat /etc/os-release:
[2026-03-09 21:28:23] NAME="CentOS Linux"
[2026-03-09 21:28:23] VERSION="7 (Core)"
[2026-03-09 21:28:23] ID="centos"
[2026-03-09 21:28:23] ID_LIKE="rhel fedora"
[2026-03-09 21:28:23] VERSION_ID="7"
[2026-03-09 21:28:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 21:28:23] ANSI_COLOR="0;31"
[2026-03-09 21:28:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 21:28:23] HOME_URL="https://www.centos.org/"
[2026-03-09 21:28:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 21:28:23] 
[2026-03-09 21:28:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 21:28:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 21:28:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 21:28:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 21:28:23] 
[2026-03-09 21:28:23] 2026-03-09 20:27:51,258 | INFO     | **************************************
[2026-03-09 21:28:23] 2026-03-09 20:27:51,760 | INFO     | executing command: df -mP /var/lib/boinc/var/slot36/slots/9
[2026-03-09 21:28:23] 2026-03-09 20:27:51,773 | INFO     | sufficient remaining disk space (24821891072 B)
[2026-03-09 21:28:23] 2026-03-09 20:27:51,774 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 21:28:23] 2026-03-09 20:27:51,774 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 21:28:23] 2026-03-09 20:27:51,774 | INFO     | update_server=False
[2026-03-09 21:28:23] 2026-03-09 20:27:51,774 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 21:28:23] 2026-03-09 20:27:51,775 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 21:28:23] 2026-03-09 20:27:51,775 | INFO     | aborting loop
[2026-03-09 21:28:23] 2026-03-09 20:27:51,777 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 21:28:23] 2026-03-09 20:27:51,921 | INFO     | all job control threads have been joined
[2026-03-09 21:28:23] 2026-03-09 20:27:51,966 | INFO     | all payload control threads have been joined
[2026-03-09 21:28:23] 2026-03-09 20:27:52,052 | INFO     | all data control threads have been joined
[2026-03-09 21:28:23] 2026-03-09 20:27:52,352 | INFO     | job.realtimelogging is not enabled
[2026-03-09 21:28:23] 2026-03-09 20:27:52,779 | INFO     | [job] retrieve thread has finished
[2026-03-09 21:28:23] 2026-03-09 20:27:52,780 | INFO     | [job] job monitor thread has finished
[2026-03-09 21:28:23] 2026-03-09 20:27:52,879 | INFO     | [payload] failed_post thread has finished
[2026-03-09 21:28:23] 2026-03-09 20:27:52,926 | INFO     | [job] control thread has finished
[2026-03-09 21:28:23] 2026-03-09 20:27:52,971 | INFO     | [payload] control thread has finished
[2026-03-09 21:28:23] 2026-03-09 20:27:53,057 | INFO     | [data] control thread has finished
[2026-03-09 21:28:23] 2026-03-09 20:27:53,156 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 21:28:23] 2026-03-09 20:27:53,357 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 21:28:23] 2026-03-09 20:27:53,644 | INFO     | [job] validate thread has finished
[2026-03-09 21:28:23] 2026-03-09 20:27:53,645 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 21:28:23] 2026-03-09 20:27:53,686 | INFO     | [payload] validate_post thread has finished
[2026-03-09 21:28:23] 2026-03-09 20:27:53,772 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 21:28:23] 2026-03-09 20:27:53,782 | INFO     | [data] copytool_out thread has finished
[2026-03-09 21:28:23] 2026-03-09 20:27:54,033 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 21:28:23] 2026-03-09 20:27:54,062 | INFO     | [data] copytool_in thread has finished
[2026-03-09 21:28:23] 2026-03-09 20:27:54,605 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 21:28:23] 2026-03-09 20:27:55,038 | INFO     | [job] queue monitor thread has finished
[2026-03-09 21:28:23] 2026-03-09 20:27:58,610 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 21:28:23] 2026-03-09 20:28:00,134 | INFO     | [monitor] cgroup control has ended
[2026-03-09 21:28:23] 2026-03-09 20:28:01,007 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22710622361408)>', '<ExcThread(monitor, started 22710383290112)>']
[2026-03-09 21:28:23] 2026-03-09 20:28:06,032 | INFO     | all workflow threads have been joined
[2026-03-09 21:28:23] 2026-03-09 20:28:06,032 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 21:28:23] 2026-03-09 20:28:06,032 | INFO     | traces error code: 0
[2026-03-09 21:28:23] 2026-03-09 20:28:06,032 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 21:28:23] 2026-03-09 20:28:22,700 | INFO     | PID=890369 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-09 21:28:23] 2026-03-09 20:28:22,701 | INFO     | .. there are 61 such processes running
[2026-03-09 21:28:23] 2026-03-09 20:28:22,701 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 21:28:23] 2026-03-09 20:28:22,701 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 21:28:23] 2026-03-09 20:28:22,701 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 21:28:23] 2026-03-09 20:28:22,701 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 21:28:23] 2026-03-09 20:28:22,701 | CRITICAL | thread 'MainThread' is not alive
[2026-03-09 21:28:23] 2026-03-09 20:28:22,701 | INFO     | [monitor] control thread has ended
[2026-03-09 21:28:23] 2026-03-09 20:28:22,877 [wrapper] ==== pilot stdout END ====
[2026-03-09 21:28:23] 2026-03-09 20:28:22,879 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 21:28:23] 2026-03-09 20:28:22,885 [wrapper] pilotpid: 890369
[2026-03-09 21:28:23] 2026-03-09 20:28:22,894 [wrapper] Pilot exit status: 0
[2026-03-09 21:28:23] 2026-03-09 20:28:22,946 [wrapper] pandaids: 7040861055
[2026-03-09 21:28:23] 2026-03-09 20:28:23,087 [wrapper] cleanup supervisor_pilot 1853304 890370
[2026-03-09 21:28:23] 2026-03-09 20:28:23,104 [wrapper] Test setup, not cleaning
[2026-03-09 21:28:23] 2026-03-09 20:28:23,114 [wrapper] apfmon messages muted
[2026-03-09 21:28:23] 2026-03-09 20:28:23,117 [wrapper] ==== wrapper stdout END ====
[2026-03-09 21:28:23] 2026-03-09 20:28:23,146 [wrapper] ==== wrapper stderr END ====
[2026-03-09 21:28:23]  *** Error codes and diagnostics ***
[2026-03-09 21:28:23]     "exeErrorCode": 0,
[2026-03-09 21:28:23]     "exeErrorDiag": "",
[2026-03-09 21:28:23]     "pilotErrorCode": 0,
[2026-03-09 21:28:23]     "pilotErrorDiag": "",
[2026-03-09 21:28:23]  *** Listing of results directory ***
[2026-03-09 21:28:23] total 619700
[2026-03-09 21:28:23] -rw-r--r--. 1 boinc boinc    584627 Mar  9 14:02 pilot3.tar.gz
[2026-03-09 21:28:23] -rwx------. 1 boinc boinc     36322 Mar  9 14:03 runpilot2-wrapper.sh
[2026-03-09 21:28:23] -rw-r--r--. 1 boinc boinc      5111 Mar  9 14:04 queuedata.json
[2026-03-09 21:28:23] -rw-r--r--. 1 boinc boinc       100 Mar  9 20:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 21:28:23] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 20:09 run_atlas
[2026-03-09 21:28:23] -rw-r--r--. 1 boinc boinc       105 Mar  9 20:09 job.xml
[2026-03-09 21:28:23] -rw-r--r--. 2 boinc boinc 443263468 Mar  9 20:09 EVNT.46701403._001364.pool.root.1
[2026-03-09 21:28:23] -rw-r--r--. 2 boinc boinc     15845 Mar  9 20:09 start_atlas.sh
[2026-03-09 21:28:23] drwxrwx--x. 2 boinc boinc      4096 Mar  9 20:09 shared
[2026-03-09 21:28:23] -rw-r--r--. 2 boinc boinc    597952 Mar  9 20:09 input.tar.gz
[2026-03-09 21:28:23] -rw-r--r--. 1 boinc boinc      6705 Mar  9 20:09 init_data.xml
[2026-03-09 21:28:23] -rw-r--r--. 1 boinc boinc         0 Mar  9 20:09 boinc_lockfile
[2026-03-09 21:28:23] -rw-r--r--. 1 boinc boinc      2562 Mar  9 20:09 pandaJob.out
[2026-03-09 21:28:23] -rw-------. 1 boinc boinc   1002738 Mar  9 20:09 agis_schedconf.cvmfs.json
[2026-03-09 21:28:23] -rw-------. 1 boinc boinc   1511578 Mar  9 20:09 agis_ddmendpoints.agis.ALL.json
[2026-03-09 21:28:23] -rw-------. 1 boinc boinc       444 Mar  9 20:09 workernode_map.json
[2026-03-09 21:28:23] drwx------. 5 boinc boinc      4096 Mar  9 20:09 pilot3
[2026-03-09 21:28:23] -rw-r--r--. 1 boinc boinc       530 Mar  9 21:27 boinc_task_state.xml
[2026-03-09 21:28:23] -rw-------. 1 boinc boinc 185452739 Mar  9 21:27 HITS.48955010._018220.pool.root.1
[2026-03-09 21:28:23] -rw-------. 1 boinc boinc        95 Mar  9 21:27 pilot_heartbeat.json
[2026-03-09 21:28:23] -rw-------. 1 boinc boinc      1043 Mar  9 21:27 memory_monitor_summary.json
[2026-03-09 21:28:23] -rw-------. 1 boinc boinc    276274 Mar  9 21:27 log.48955010._018220.job.log.tgz.1
[2026-03-09 21:28:23] -rw-------. 1 boinc boinc      6354 Mar  9 21:27 heartbeat.json
[2026-03-09 21:28:23] -rw-r--r--. 1 boinc boinc      8192 Mar  9 21:27 boinc_mmap_file
[2026-03-09 21:28:23] -rw-r--r--. 1 boinc boinc        27 Mar  9 21:27 wrapper_checkpoint.txt
[2026-03-09 21:28:23] -rw-------. 1 boinc boinc       892 Mar  9 21:28 pilotlog.txt
[2026-03-09 21:28:23] -rw-------. 1 boinc boinc    687336 Mar  9 21:28 log.48955010._018220.job.log.1
[2026-03-09 21:28:23] -rw-------. 1 boinc boinc       357 Mar  9 21:28 output.list
[2026-03-09 21:28:23] -rw-r--r--. 1 boinc boinc       620 Mar  9 21:28 runtime_log
[2026-03-09 21:28:23] -rw-------. 1 boinc boinc    983040 Mar  9 21:28 result.tar.gz
[2026-03-09 21:28:23] -rw-r--r--. 1 boinc boinc      9204 Mar  9 21:28 runtime_log.err
[2026-03-09 21:28:23] -rw-------. 1 boinc boinc       662 Mar  9 21:28 a0tNDmtRpJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmracLDmwvyJGm.diag
[2026-03-09 21:28:23] -rw-r--r--. 1 boinc boinc     20988 Mar  9 21:28 stderr.txt
[2026-03-09 21:28:23] HITS file was successfully produced:
[2026-03-09 21:28:23] -rw-------. 1 boinc boinc 185452739 Mar  9 21:27 shared/HITS.pool.root.1
[2026-03-09 21:28:23]  *** Contents of shared directory: ***
[2026-03-09 21:28:23] total 615552
[2026-03-09 21:28:23] -rw-r--r--. 2 boinc boinc 443263468 Mar  9 20:09 ATLAS.root_0
[2026-03-09 21:28:23] -rw-r--r--. 2 boinc boinc     15845 Mar  9 20:09 start_atlas.sh
[2026-03-09 21:28:23] -rw-r--r--. 2 boinc boinc    597952 Mar  9 20:09 input.tar.gz
[2026-03-09 21:28:23] -rw-------. 1 boinc boinc 185452739 Mar  9 21:27 HITS.pool.root.1
[2026-03-09 21:28:23] -rw-------. 1 boinc boinc    983040 Mar  9 21:28 result.tar.gz
21:28:24 (874636): run_atlas exited; CPU time 18077.641673
21:28:24 (874636): called boinc_finish(0)

</stderr_txt>
]]>

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