Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:13:38 (1165166): wrapper (7.7.26015): starting
03:13:38 (1165166): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 03:13:38] Arguments: --nthreads 4
[2026-03-10 03:13:38] Threads: 4
[2026-03-10 03:13:38] Checking for CVMFS
[2026-03-10 03:13:38] No cvmfs_config command found, will try listing directly
[2026-03-10 03:13:38] CVMFS is ok
[2026-03-10 03:13:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 03:13:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 03:13:38] Further information can be found at the LHC@home message board.
[2026-03-10 03:13:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 03:13:38] Checking for apptainer binary...
[2026-03-10 03:13:38] which: no apptainer in ((null))
[2026-03-10 03:13:38] apptainer is not installed, using version from CVMFS
[2026-03-10 03:13:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 03:13:38] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot52/slots/9/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-10 03:13:38] apptainer works
[2026-03-10 03:13:38] Set ATHENA_PROC_NUMBER=4
[2026-03-10 03:13:38] Set ATHENA_CORE_NUMBER=4
[2026-03-10 03:13:38] Starting ATLAS job with PandaID=7040861027
[2026-03-10 03:13:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot52/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 04:30:03]  *** The last 200 lines of the pilot log: ***
[2026-03-10 04:30:03]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-10 04:30:03]  is_altstaged=None
[2026-03-10 04:30:03]  is_tar=False
[2026-03-10 04:30:03]  lfn=log.48955010._018192.job.log.tgz.1
[2026-03-10 04:30:03]  mtime=0
[2026-03-10 04:30:03]  protocol_id=None
[2026-03-10 04:30:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-10 04:30:03]  replicas=None
[2026-03-10 04:30:03]  scope=mc23_13p6TeV
[2026-03-10 04:30:03]  status=None
[2026-03-10 04:30:03]  status_code=0
[2026-03-10 04:30:03]  storage_token=
[2026-03-10 04:30:03]  surl=/var/lib/boinc/var/slot52/slots/9/PanDA_Pilot-7040861027/log.48955010._018192.job.log.tgz.1
[2026-03-10 04:30:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/be/log.48955010._018192.job.log.tgz.1
[2026-03-10 04:30:03]  workdir=None
[2026-03-10 04:30:03] ]
[2026-03-10 04:30:03] 2026-03-10 03:29:28,970 | INFO     | transferring file log.48955010._018192.job.log.tgz.1 from /var/lib/boinc/var/slot52/slots/9/PanDA_Pilot-7040861027/log.48955010._018192.job.log.tgz.1 to /var/lib/b
[2026-03-10 04:30:03] 2026-03-10 03:29:28,971 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot52/slots/9/PanDA_Pilot-7040861027/log.48955010._018192.job.log.tgz.1 /var/lib/boinc/var/slot52/slots/9/lo
[2026-03-10 04:30:03] 2026-03-10 03:29:28,984 | INFO     | adding to output.list: log.48955010._018192.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/be/log.48955010._018192.job.log.tg
[2026-03-10 04:30:03] 2026-03-10 03:29:28,984 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 04:30:03] 2026-03-10 03:29:28,984 | INFO     | summary of transferred files:
[2026-03-10 04:30:03] 2026-03-10 03:29:28,984 | INFO     |  -- lfn=log.48955010._018192.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 04:30:03] 2026-03-10 03:29:28,984 | INFO     | stage-out finished correctly
[2026-03-10 04:30:03] 2026-03-10 03:29:29,096 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 04:30:03] 2026-03-10 03:29:29,144 | INFO     | job 7040861027 has state=finished
[2026-03-10 04:30:03] 2026-03-10 03:29:29,145 | INFO     | preparing for final server update for job 7040861027 in state='finished'
[2026-03-10 04:30:03] 2026-03-10 03:29:29,808 | INFO     | time since job start (4539s) is within the limit (349056.0s)
[2026-03-10 04:30:03] 2026-03-10 03:29:29,813 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-10 04:30:03] 2026-03-10 03:29:29,813 | INFO     | reading metadata from: /var/lib/boinc/var/slot52/slots/9/PanDA_Pilot-7040861027/jobReport.json
[2026-03-10 04:30:03] 2026-03-10 03:29:29,814 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot52/slots/9/workernode_map.json
[2026-03-10 04:30:03] 2026-03-10 03:29:29,815 | INFO     | this job has now completed (state=finished)
[2026-03-10 04:30:03] 2026-03-10 03:29:29,815 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 04:30:03] 2026-03-10 03:29:29,815 | INFO     | log transfer has been attempted: DONE
[2026-03-10 04:30:03] 2026-03-10 03:29:29,815 | INFO     | job 7040861027 has finished - writing final server update
[2026-03-10 04:30:03] 2026-03-10 03:29:29,815 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_652159/.job.ad'
[2026-03-10 04:30:03] 2026-03-10 03:29:29,815 | INFO     | total number of processed events: 400 (read)
[2026-03-10 04:30:03] 2026-03-10 03:29:29,833 | INFO     | using path: /var/lib/boinc/var/slot52/slots/9/PanDA_Pilot-7040861027/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 04:30:03] 2026-03-10 03:29:29,833 | INFO     | extracted standard info from prmon json
[2026-03-10 04:30:03] 2026-03-10 03:29:29,833 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 04:30:03] 2026-03-10 03:29:29,833 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 04:30:03] 2026-03-10 03:29:29,833 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 04:30:03] 2026-03-10 03:29:29,833 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 04:30:03] 2026-03-10 03:29:29,834 | INFO     | fitting pss+swap vs Time
[2026-03-10 04:30:03] 2026-03-10 03:29:29,834 | INFO     | sum of square deviations: 97479037.0
[2026-03-10 04:30:03] 2026-03-10 03:29:29,835 | INFO     | sum of deviations: -699407791.5
[2026-03-10 04:30:03] 2026-03-10 03:29:29,835 | INFO     | mean x: 1773111199.5
[2026-03-10 04:30:03] 2026-03-10 03:29:29,835 | INFO     | mean y: 2332983.779411765
[2026-03-10 04:30:03] 2026-03-10 03:29:29,835 | INFO     | intersect: 12724327643.269234
[2026-03-10 04:30:03] 2026-03-10 03:29:29,835 | INFO     | chi2: 0.00011271248524074861
[2026-03-10 04:30:03] 2026-03-10 03:29:29,835 | INFO     | current memory leak: -7.17 B/s (using 68 data points, chi2=0.00)
[2026-03-10 04:30:03] 2026-03-10 03:29:29,835 | INFO     | could have reported an average CPU frequency of 3600 MHz (6 samples)
[2026-03-10 04:30:03] 2026-03-10 03:29:29,835 | INFO     | ..............................
[2026-03-10 04:30:03] 2026-03-10 03:29:29,835 | INFO     | . Timing measurements:
[2026-03-10 04:30:03] 2026-03-10 03:29:29,835 | INFO     | . get job = 0 s
[2026-03-10 04:30:03] 2026-03-10 03:29:29,835 | INFO     | . initial setup = 4 s
[2026-03-10 04:30:03] 2026-03-10 03:29:29,835 | INFO     | . payload setup = 4 s
[2026-03-10 04:30:03] 2026-03-10 03:29:29,835 | INFO     | . stage-in = 0 s
[2026-03-10 04:30:03] 2026-03-10 03:29:29,835 | INFO     | . payload execution = 4518 s
[2026-03-10 04:30:03] 2026-03-10 03:29:29,835 | INFO     | . stage-out = 0 s
[2026-03-10 04:30:03] 2026-03-10 03:29:29,835 | INFO     | . log creation = 0 s
[2026-03-10 04:30:03] 2026-03-10 03:29:29,835 | INFO     | ..............................
[2026-03-10 04:30:03] 2026-03-10 03:29:29,884 | INFO     | 
[2026-03-10 04:30:03] 2026-03-10 03:29:29,884 | INFO     | job summary report
[2026-03-10 04:30:03] 2026-03-10 03:29:29,884 | INFO     | --------------------------------------------------
[2026-03-10 04:30:03] 2026-03-10 03:29:29,884 | INFO     | PanDA job id: 7040861027
[2026-03-10 04:30:03] 2026-03-10 03:29:29,884 | INFO     | task id: 48955010
[2026-03-10 04:30:03] 2026-03-10 03:29:29,884 | INFO     | errors: (none)
[2026-03-10 04:30:03] 2026-03-10 03:29:29,884 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 04:30:03] 2026-03-10 03:29:29,885 | INFO     | pilot state: finished 
[2026-03-10 04:30:03] 2026-03-10 03:29:29,885 | INFO     | transexitcode: 0
[2026-03-10 04:30:03] 2026-03-10 03:29:29,885 | INFO     | exeerrorcode: 0
[2026-03-10 04:30:03] 2026-03-10 03:29:29,885 | INFO     | exeerrordiag: 
[2026-03-10 04:30:03] 2026-03-10 03:29:29,885 | INFO     | exitcode: 0
[2026-03-10 04:30:03] 2026-03-10 03:29:29,885 | INFO     | exitmsg: OK
[2026-03-10 04:30:03] 2026-03-10 03:29:29,885 | INFO     | cpuconsumptiontime: 17335 s
[2026-03-10 04:30:03] 2026-03-10 03:29:29,885 | INFO     | nevents: 400
[2026-03-10 04:30:03] 2026-03-10 03:29:29,885 | INFO     | neventsw: 0
[2026-03-10 04:30:03] 2026-03-10 03:29:29,885 | INFO     | pid: 1182688
[2026-03-10 04:30:03] 2026-03-10 03:29:29,885 | INFO     | pgrp: 1182688
[2026-03-10 04:30:03] 2026-03-10 03:29:29,885 | INFO     | corecount: 4
[2026-03-10 04:30:03] 2026-03-10 03:29:29,885 | INFO     | event service: False
[2026-03-10 04:30:03] 2026-03-10 03:29:29,885 | INFO     | sizes: {0: 2279089, 1: 2280218, 11: 2280218, 4527: 2306419, 4528: 2315495, 4529: 2315633}
[2026-03-10 04:30:03] 2026-03-10 03:29:29,885 | INFO     | --------------------------------------------------
[2026-03-10 04:30:03] 2026-03-10 03:29:29,888 | INFO     | 
[2026-03-10 04:30:03] 2026-03-10 03:29:29,888 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot52/slots/9
[2026-03-10 04:30:03] 2026-03-10 03:29:29,905 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 04:30:03] 2026-03-10 03:29:29,905 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 04:30:03] 2026-03-10 03:29:29,905 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 04:30:03] 2026-03-10 03:29:29,905 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 04:30:03] 2026-03-10 03:29:29,905 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 04:30:03] 2026-03-10 03:29:29,906 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 04:30:03] 2026-03-10 03:29:29,906 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 04:30:03] 2026-03-10 03:29:29,906 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 04:30:03] 2026-03-10 03:29:29,906 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 04:30:03] 2026-03-10 03:29:29,906 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 04:30:03] 2026-03-10 03:29:29,906 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 04:30:03] 2026-03-10 03:29:29,906 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 04:30:03] 2026-03-10 03:29:29,906 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 04:30:03] 2026-03-10 03:29:29,906 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 04:30:03] 2026-03-10 03:29:29,906 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 04:30:03] 2026-03-10 03:29:29,906 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 04:30:03] 2026-03-10 03:29:29,906 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 04:30:03] 2026-03-10 03:29:29,906 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 04:30:03] 2026-03-10 03:29:29,906 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 04:30:03] 2026-03-10 03:29:29,906 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 04:30:03] 2026-03-10 03:29:29,906 | INFO     | job 7040861027 has completed (purged errors)
[2026-03-10 04:30:03] 2026-03-10 03:29:29,906 | INFO     | overall cleanup function is called
[2026-03-10 04:30:03] 2026-03-10 03:29:30,912 | INFO     | --- collectZombieJob: --- 10, [1182688]
[2026-03-10 04:30:03] 2026-03-10 03:29:30,913 | INFO     | zombie collector waiting for pid 1182688
[2026-03-10 04:30:03] 2026-03-10 03:29:30,913 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 04:30:03] 2026-03-10 03:29:30,913 | INFO     | collected zombie processes
[2026-03-10 04:30:03] 2026-03-10 03:29:30,913 | INFO     | will attempt to kill all subprocesses of pid=1182688
[2026-03-10 04:30:03] 2026-03-10 03:29:32,028 | INFO     | PID=1170488 has CPU usage=12.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-10 04:30:03] 2026-03-10 03:29:32,028 | INFO     | .. there are 58 such processes running
[2026-03-10 04:30:03] 2026-03-10 03:29:32,088 | INFO     | process IDs to be killed: [1182688] (in reverse order)
[2026-03-10 04:30:03] 2026-03-10 03:29:32,289 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 04:30:03] 2026-03-10 03:29:32,289 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 04:30:03] 2026-03-10 03:29:32,314 | INFO     | did not find any defunct processes belonging to 1182688
[2026-03-10 04:30:03] 2026-03-10 03:29:32,337 | INFO     | did not find any defunct processes belonging to 1182688
[2026-03-10 04:30:03] 2026-03-10 03:29:32,338 | INFO     | ready for new job
[2026-03-10 04:30:03] 2026-03-10 03:29:32,338 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 04:30:03] 2026-03-10 03:29:32,339 | INFO     | **************************************
[2026-03-10 04:30:03] 2026-03-10 03:29:32,339 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 04:30:03] 2026-03-10 03:29:32,339 | INFO     | **************************************
[2026-03-10 04:30:03] 2026-03-10 03:29:32,339 | INFO     | 
[2026-03-10 04:30:03] 2026-03-10 03:29:32,344 | INFO     | architecture information:
[2026-03-10 04:30:03] 2026-03-10 03:29:32,345 | INFO     | executing command: cat /etc/os-release
[2026-03-10 04:30:03] 2026-03-10 03:29:32,357 | INFO     | cat /etc/os-release:
[2026-03-10 04:30:03] NAME="CentOS Linux"
[2026-03-10 04:30:03] VERSION="7 (Core)"
[2026-03-10 04:30:03] ID="centos"
[2026-03-10 04:30:03] ID_LIKE="rhel fedora"
[2026-03-10 04:30:03] VERSION_ID="7"
[2026-03-10 04:30:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 04:30:03] ANSI_COLOR="0;31"
[2026-03-10 04:30:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 04:30:03] HOME_URL="https://www.centos.org/"
[2026-03-10 04:30:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 04:30:03] 
[2026-03-10 04:30:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 04:30:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 04:30:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 04:30:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 04:30:03] 
[2026-03-10 04:30:03] 2026-03-10 03:29:32,357 | INFO     | **************************************
[2026-03-10 04:30:03] 2026-03-10 03:29:32,860 | INFO     | executing command: df -mP /var/lib/boinc/var/slot52/slots/9
[2026-03-10 04:30:03] 2026-03-10 03:29:32,878 | INFO     | sufficient remaining disk space (19896729600 B)
[2026-03-10 04:30:03] 2026-03-10 03:29:32,878 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 04:30:03] 2026-03-10 03:29:32,878 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 04:30:03] 2026-03-10 03:29:32,878 | INFO     | update_server=False
[2026-03-10 04:30:03] 2026-03-10 03:29:32,878 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 04:30:03] 2026-03-10 03:29:32,878 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-10 04:30:03] 2026-03-10 03:29:32,878 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 04:30:03] 2026-03-10 03:29:32,879 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 04:30:03] 2026-03-10 03:29:32,879 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 04:30:03] 2026-03-10 03:29:32,879 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 04:30:03] 2026-03-10 03:29:33,136 | INFO     | all payload control threads have been joined
[2026-03-10 04:30:03] 2026-03-10 03:29:33,154 | INFO     | all job control threads have been joined
[2026-03-10 04:30:03] 2026-03-10 03:29:33,177 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-10 04:30:03] 2026-03-10 03:29:33,178 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-10 04:30:03] 2026-03-10 03:29:33,178 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 04:30:03] 2026-03-10 03:29:33,178 | INFO     | will abort loop
[2026-03-10 04:30:03] 2026-03-10 03:29:33,490 | INFO     | all data control threads have been joined
[2026-03-10 04:30:03] 2026-03-10 03:29:33,883 | INFO     | [job] retrieve thread has finished
[2026-03-10 04:30:03] 2026-03-10 03:29:33,969 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 04:30:03] 2026-03-10 03:29:34,038 | INFO     | [job] validate thread has finished
[2026-03-10 04:30:03] 2026-03-10 03:29:34,142 | INFO     | [payload] control thread has finished
[2026-03-10 04:30:03] 2026-03-10 03:29:34,146 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 04:30:03] 2026-03-10 03:29:34,160 | INFO     | [job] control thread has finished
[2026-03-10 04:30:03] 2026-03-10 03:29:34,183 | INFO     | [job] job monitor thread has finished
[2026-03-10 04:30:03] 2026-03-10 03:29:34,264 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 04:30:03] 2026-03-10 03:29:34,308 | INFO     | [payload] validate_post thread has finished
[2026-03-10 04:30:03] 2026-03-10 03:29:34,406 | INFO     | [data] copytool_in thread has finished
[2026-03-10 04:30:03] 2026-03-10 03:29:34,496 | INFO     | [data] control thread has finished
[2026-03-10 04:30:03] 2026-03-10 03:29:34,883 | INFO     | [data] copytool_out thread has finished
[2026-03-10 04:30:03] 2026-03-10 03:29:34,893 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 04:30:03] 2026-03-10 03:29:34,923 | INFO     | [payload] failed_post thread has finished
[2026-03-10 04:30:03] 2026-03-10 03:29:35,150 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 04:30:03] 2026-03-10 03:29:35,898 | INFO     | [job] queue monitor thread has finished
[2026-03-10 04:30:03] 2026-03-10 03:29:39,157 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 04:30:03] 2026-03-10 03:29:43,148 | INFO     | job.realtimelogging is not enabled
[2026-03-10 04:30:03] 2026-03-10 03:29:44,154 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 04:30:03] 2026-03-10 03:29:57,618 | INFO     | [monitor] cgroup control has ended
[2026-03-10 04:30:03] 2026-03-10 03:29:58,351 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22684838278976)>', '<ExcThread(monitor, started 22684526151424)>']
[2026-03-10 04:30:03] 2026-03-10 03:29:59,005 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 04:30:03] 2026-03-10 03:29:59,005 | INFO     | [monitor] control thread has ended
[2026-03-10 04:30:03] 2026-03-10 03:30:03,376 | INFO     | all workflow threads have been joined
[2026-03-10 04:30:03] 2026-03-10 03:30:03,377 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 04:30:03] 2026-03-10 03:30:03,377 | INFO     | traces error code: 0
[2026-03-10 04:30:03] 2026-03-10 03:30:03,377 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 04:30:03] 2026-03-10 03:30:03,488 [wrapper] ==== pilot stdout END ====
[2026-03-10 04:30:03] 2026-03-10 03:30:03,490 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 04:30:03] 2026-03-10 03:30:03,491 [wrapper] pilotpid: 1170488
[2026-03-10 04:30:03] 2026-03-10 03:30:03,493 [wrapper] Pilot exit status: 0
[2026-03-10 04:30:03] 2026-03-10 03:30:03,500 [wrapper] pandaids: 7040861027
[2026-03-10 04:30:03] 2026-03-10 03:30:03,640 [wrapper] cleanup supervisor_pilot 2040830 1170489
[2026-03-10 04:30:03] 2026-03-10 03:30:03,643 [wrapper] Test setup, not cleaning
[2026-03-10 04:30:03] 2026-03-10 03:30:03,645 [wrapper] apfmon messages muted
[2026-03-10 04:30:03] 2026-03-10 03:30:03,647 [wrapper] ==== wrapper stdout END ====
[2026-03-10 04:30:03] 2026-03-10 03:30:03,649 [wrapper] ==== wrapper stderr END ====
[2026-03-10 04:30:03]  *** Error codes and diagnostics ***
[2026-03-10 04:30:03]     "exeErrorCode": 0,
[2026-03-10 04:30:03]     "exeErrorDiag": "",
[2026-03-10 04:30:03]     "pilotErrorCode": 0,
[2026-03-10 04:30:03]     "pilotErrorDiag": "",
[2026-03-10 04:30:03]  *** Listing of results directory ***
[2026-03-10 04:30:03] total 612464
[2026-03-10 04:30:03] -rw-r--r--. 1 boinc boinc    584627 Mar  9 14:02 pilot3.tar.gz
[2026-03-10 04:30:03] -rwx------. 1 boinc boinc     36322 Mar  9 14:03 runpilot2-wrapper.sh
[2026-03-10 04:30:03] -rw-r--r--. 1 boinc boinc      5111 Mar  9 14:04 queuedata.json
[2026-03-10 04:30:03] -rw-r--r--. 1 boinc boinc       100 Mar 10 03:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 04:30:03] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 03:13 run_atlas
[2026-03-10 04:30:03] -rw-r--r--. 1 boinc boinc       105 Mar 10 03:13 job.xml
[2026-03-10 04:30:03] -rw-r--r--. 1 boinc boinc      6704 Mar 10 03:13 init_data.xml
[2026-03-10 04:30:03] -rw-r--r--. 2 boinc boinc 444977189 Mar 10 03:13 EVNT.46701403._001363.pool.root.1
[2026-03-10 04:30:03] -rw-r--r--. 2 boinc boinc     15845 Mar 10 03:13 start_atlas.sh
[2026-03-10 04:30:03] drwxrwx--x. 2 boinc boinc      4096 Mar 10 03:13 shared
[2026-03-10 04:30:03] -rw-r--r--. 2 boinc boinc    597962 Mar 10 03:13 input.tar.gz
[2026-03-10 04:30:03] -rw-r--r--. 1 boinc boinc         0 Mar 10 03:13 boinc_lockfile
[2026-03-10 04:30:03] -rw-r--r--. 1 boinc boinc      2563 Mar 10 03:13 pandaJob.out
[2026-03-10 04:30:03] -rw-------. 1 boinc boinc   1002338 Mar 10 03:13 agis_schedconf.cvmfs.json
[2026-03-10 04:30:03] -rw-------. 1 boinc boinc   1511578 Mar 10 03:13 agis_ddmendpoints.agis.ALL.json
[2026-03-10 04:30:03] -rw-------. 1 boinc boinc       444 Mar 10 03:13 workernode_map.json
[2026-03-10 04:30:03] drwx------. 5 boinc boinc      4096 Mar 10 03:13 pilot3
[2026-03-10 04:30:03] -rw-------. 1 boinc boinc 176298415 Mar 10 04:29 HITS.48955010._018192.pool.root.1
[2026-03-10 04:30:03] -rw-r--r--. 1 boinc boinc       530 Mar 10 04:29 boinc_task_state.xml
[2026-03-10 04:30:03] -rw-------. 1 boinc boinc      1031 Mar 10 04:29 memory_monitor_summary.json
[2026-03-10 04:30:03] -rw-------. 1 boinc boinc    300118 Mar 10 04:29 log.48955010._018192.job.log.tgz.1
[2026-03-10 04:30:03] -rw-------. 1 boinc boinc      6358 Mar 10 04:29 heartbeat.json
[2026-03-10 04:30:03] -rw-------. 1 boinc boinc        95 Mar 10 04:29 pilot_heartbeat.json
[2026-03-10 04:30:03] -rw-r--r--. 1 boinc boinc      8192 Mar 10 04:29 boinc_mmap_file
[2026-03-10 04:30:03] -rw-r--r--. 1 boinc boinc        27 Mar 10 04:29 wrapper_checkpoint.txt
[2026-03-10 04:30:03] -rw-------. 1 boinc boinc      4815 Mar 10 04:30 pilotlog.txt
[2026-03-10 04:30:03] -rw-------. 1 boinc boinc    672339 Mar 10 04:30 log.48955010._018192.job.log.1
[2026-03-10 04:30:03] -rw-------. 1 boinc boinc       357 Mar 10 04:30 output.list
[2026-03-10 04:30:03] -rw-r--r--. 1 boinc boinc       620 Mar 10 04:30 runtime_log
[2026-03-10 04:30:03] -rw-------. 1 boinc boinc    993280 Mar 10 04:30 result.tar.gz
[2026-03-10 04:30:03] -rw-r--r--. 1 boinc boinc      9204 Mar 10 04:30 runtime_log.err
[2026-03-10 04:30:03] -rw-------. 1 boinc boinc       662 Mar 10 04:30 CXuMDmtRpJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmdacLDmzoeuKm.diag
[2026-03-10 04:30:03] -rw-r--r--. 1 boinc boinc     21276 Mar 10 04:30 stderr.txt
[2026-03-10 04:30:03] HITS file was successfully produced:
[2026-03-10 04:30:03] -rw-------. 1 boinc boinc 176298415 Mar 10 04:29 shared/HITS.pool.root.1
[2026-03-10 04:30:03]  *** Contents of shared directory: ***
[2026-03-10 04:30:03] total 608300
[2026-03-10 04:30:03] -rw-r--r--. 2 boinc boinc 444977189 Mar 10 03:13 ATLAS.root_0
[2026-03-10 04:30:03] -rw-r--r--. 2 boinc boinc     15845 Mar 10 03:13 start_atlas.sh
[2026-03-10 04:30:03] -rw-r--r--. 2 boinc boinc    597962 Mar 10 03:13 input.tar.gz
[2026-03-10 04:30:03] -rw-------. 1 boinc boinc 176298415 Mar 10 04:29 HITS.pool.root.1
[2026-03-10 04:30:03] -rw-------. 1 boinc boinc    993280 Mar 10 04:30 result.tar.gz
04:30:05 (1165166): run_atlas exited; CPU time 17493.343812
04:30:05 (1165166): called boinc_finish(0)

</stderr_txt>
]]>

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