Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
16:04:42 (2565613): wrapper (7.7.26015): starting
16:04:42 (2565613): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 16:04:42] Arguments: --nthreads 4
[2026-03-09 16:04:42] Threads: 4
[2026-03-09 16:04:42] Checking for CVMFS
[2026-03-09 16:04:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 16:04:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 16:04:44] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 16:04:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 16:04:45] 2.13.3.0 3889861 17678 54168 157089 0 188 5960589 6144000 6454 130560 0 38004538 99.996 656799 1025 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.30:3128 1
[2026-03-09 16:04:45] CVMFS is ok
[2026-03-09 16:04:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 16:04:45] Checking for apptainer binary...
[2026-03-09 16:04:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 16:04:45] Running /usr/bin/apptainer --version
[2026-03-09 16:04:45] apptainer version 1.4.5
[2026-03-09 16:04:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 16:04:45] Starfish-Cruncher
[2026-03-09 16:04:45] apptainer works
[2026-03-09 16:04:45] Set ATHENA_PROC_NUMBER=4
[2026-03-09 16:04:45] Set ATHENA_CORE_NUMBER=4
[2026-03-09 16:04:45] Starting ATLAS job with PandaID=7034857297
[2026-03-09 16:04:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 17:43:15]  *** The last 200 lines of the pilot log: ***
[2026-03-09 17:43:15]  storage_token=
[2026-03-09 17:43:15]  surl=/var/lib/boinc-client/slots/5/PanDA_Pilot-7034857297/log.48700922._002596.job.log.tgz.1
[2026-03-09 17:43:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8f/74/log.48700922._002596.job.log.tgz.1
[2026-03-09 17:43:15]  workdir=None
[2026-03-09 17:43:15] ]
[2026-03-09 17:43:15] 2026-03-09 22:42:32,965 | INFO     | transferring file log.48700922._002596.job.log.tgz.1 from /var/lib/boinc-client/slots/5/PanDA_Pilot-7034857297/log.48700922._002596.job.log.tgz.1 to /var/lib/boinc
[2026-03-09 17:43:15] 2026-03-09 22:42:32,965 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/5/PanDA_Pilot-7034857297/log.48700922._002596.job.log.tgz.1 /var/lib/boinc-client/slots/5/log.487009
[2026-03-09 17:43:15] 2026-03-09 22:42:32,981 | INFO     | adding to output.list: log.48700922._002596.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8f/74/log.48700922._002596.job.log.tg
[2026-03-09 17:43:15] 2026-03-09 22:42:32,981 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-09 17:43:15] 2026-03-09 22:42:32,982 | INFO     | summary of transferred files:
[2026-03-09 17:43:15] 2026-03-09 22:42:32,982 | INFO     |  -- lfn=log.48700922._002596.job.log.tgz.1, status_code=0, status=transferred
[2026-03-09 17:43:15] 2026-03-09 22:42:32,982 | INFO     | stage-out finished correctly
[2026-03-09 17:43:15] 2026-03-09 22:42:33,915 | INFO     | PID=2569899 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 17:43:15] 2026-03-09 22:42:33,916 | INFO     | .. there are 8 such processes running
[2026-03-09 17:43:15] 2026-03-09 22:42:34,916 | INFO     | time since job start (5854s) is within the limit (349056.0s)
[2026-03-09 17:43:15] 2026-03-09 22:42:35,813 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-09 17:43:15] 2026-03-09 22:42:36,921 | INFO     | time since job start (5856s) is within the limit (349056.0s)
[2026-03-09 17:43:15] 2026-03-09 22:42:38,679 | INFO     | job 7034857297 has state=finished
[2026-03-09 17:43:15] 2026-03-09 22:42:38,679 | INFO     | preparing for final server update for job 7034857297 in state='finished'
[2026-03-09 17:43:15] 2026-03-09 22:42:38,679 | INFO     | reading metadata from: /var/lib/boinc-client/slots/5/PanDA_Pilot-7034857297/jobReport.json
[2026-03-09 17:43:15] 2026-03-09 22:42:38,681 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/5/workernode_map.json
[2026-03-09 17:43:15] 2026-03-09 22:42:38,681 | INFO     | this job has now completed (state=finished)
[2026-03-09 17:43:15] 2026-03-09 22:42:38,681 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 17:43:15] 2026-03-09 22:42:38,681 | INFO     | log transfer has been attempted: DONE
[2026-03-09 17:43:15] 2026-03-09 22:42:38,681 | INFO     | job 7034857297 has finished - writing final server update
[2026-03-09 17:43:15] 2026-03-09 22:42:38,681 | INFO     | total number of processed events: 400 (read)
[2026-03-09 17:43:15] 2026-03-09 22:42:38,686 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-7034857297/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 17:43:15] 2026-03-09 22:42:38,686 | INFO     | extracted standard info from prmon json
[2026-03-09 17:43:15] 2026-03-09 22:42:38,686 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 17:43:15] 2026-03-09 22:42:38,686 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 17:43:15] 2026-03-09 22:42:38,686 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 17:43:15] 2026-03-09 22:42:38,686 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 17:43:15] 2026-03-09 22:42:38,688 | INFO     | fitting pss+swap vs Time
[2026-03-09 17:43:15] 2026-03-09 22:42:38,688 | INFO     | sum of square deviations: 218571540.0
[2026-03-09 17:43:15] 2026-03-09 22:42:38,688 | INFO     | sum of deviations: 53657674.000000045
[2026-03-09 17:43:15] 2026-03-09 22:42:38,688 | INFO     | mean x: 1773093309.0
[2026-03-09 17:43:15] 2026-03-09 22:42:38,688 | INFO     | mean y: 2296661.202247191
[2026-03-09 17:43:15] 2026-03-09 22:42:38,688 | INFO     | intersect: -432984449.71412987
[2026-03-09 17:43:15] 2026-03-09 22:42:38,689 | INFO     | chi2: 0.007246590955741433
[2026-03-09 17:43:15] 2026-03-09 22:42:38,689 | INFO     | current memory leak: 0.25 B/s (using 89 data points, chi2=0.01)
[2026-03-09 17:43:15] 2026-03-09 22:42:38,689 | INFO     | could have reported an average CPU frequency of 3647 MHz (7 samples)
[2026-03-09 17:43:15] 2026-03-09 22:42:38,689 | INFO     | ..............................
[2026-03-09 17:43:15] 2026-03-09 22:42:38,689 | INFO     | . Timing measurements:
[2026-03-09 17:43:15] 2026-03-09 22:42:38,689 | INFO     | . get job = 0 s
[2026-03-09 17:43:15] 2026-03-09 22:42:38,689 | INFO     | . initial setup = 5 s
[2026-03-09 17:43:15] 2026-03-09 22:42:38,689 | INFO     | . payload setup = 4 s
[2026-03-09 17:43:15] 2026-03-09 22:42:38,689 | INFO     | . stage-in = 0 s
[2026-03-09 17:43:15] 2026-03-09 22:42:38,689 | INFO     | . payload execution = 5833 s
[2026-03-09 17:43:15] 2026-03-09 22:42:38,689 | INFO     | . stage-out = 0 s
[2026-03-09 17:43:15] 2026-03-09 22:42:38,690 | INFO     | . log creation = 0 s
[2026-03-09 17:43:15] 2026-03-09 22:42:38,690 | INFO     | ..............................
[2026-03-09 17:43:15] 2026-03-09 22:42:38,755 | INFO     | 
[2026-03-09 17:43:15] 2026-03-09 22:42:38,756 | INFO     | job summary report
[2026-03-09 17:43:15] 2026-03-09 22:42:38,756 | INFO     | --------------------------------------------------
[2026-03-09 17:43:15] 2026-03-09 22:42:38,756 | INFO     | PanDA job id: 7034857297
[2026-03-09 17:43:15] 2026-03-09 22:42:38,756 | INFO     | task id: 48700922
[2026-03-09 17:43:15] 2026-03-09 22:42:38,756 | INFO     | errors: (none)
[2026-03-09 17:43:15] 2026-03-09 22:42:38,756 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 17:43:15] 2026-03-09 22:42:38,756 | INFO     | pilot state: finished 
[2026-03-09 17:43:15] 2026-03-09 22:42:38,756 | INFO     | transexitcode: 0
[2026-03-09 17:43:15] 2026-03-09 22:42:38,756 | INFO     | exeerrorcode: 0
[2026-03-09 17:43:15] 2026-03-09 22:42:38,756 | INFO     | exeerrordiag: 
[2026-03-09 17:43:15] 2026-03-09 22:42:38,756 | INFO     | exitcode: 0
[2026-03-09 17:43:15] 2026-03-09 22:42:38,756 | INFO     | exitmsg: OK
[2026-03-09 17:43:15] 2026-03-09 22:42:38,756 | INFO     | cpuconsumptiontime: 22331 s
[2026-03-09 17:43:15] 2026-03-09 22:42:38,756 | INFO     | nevents: 400
[2026-03-09 17:43:15] 2026-03-09 22:42:38,756 | INFO     | neventsw: 0
[2026-03-09 17:43:15] 2026-03-09 22:42:38,756 | INFO     | pid: 2574626
[2026-03-09 17:43:15] 2026-03-09 22:42:38,757 | INFO     | pgrp: 2574626
[2026-03-09 17:43:15] 2026-03-09 22:42:38,757 | INFO     | corecount: 4
[2026-03-09 17:43:15] 2026-03-09 22:42:38,757 | INFO     | event service: False
[2026-03-09 17:43:15] 2026-03-09 22:42:38,757 | INFO     | sizes: {0: 2280181, 11: 2280181, 5841: 2306969, 5842: 2315981, 5845: 2316037, 5847: 2316231}
[2026-03-09 17:43:15] 2026-03-09 22:42:38,757 | INFO     | --------------------------------------------------
[2026-03-09 17:43:15] 2026-03-09 22:42:38,757 | INFO     | 
[2026-03-09 17:43:15] 2026-03-09 22:42:38,757 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2026-03-09 17:43:15] 2026-03-09 22:42:38,773 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 17:43:15] 2026-03-09 22:42:38,773 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 17:43:15] 2026-03-09 22:42:38,773 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 17:43:15] 2026-03-09 22:42:38,773 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 17:43:15] 2026-03-09 22:42:38,774 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 17:43:15] 2026-03-09 22:42:38,774 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 17:43:15] 2026-03-09 22:42:38,774 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 17:43:15] 2026-03-09 22:42:38,774 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 17:43:15] 2026-03-09 22:42:38,774 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 17:43:15] 2026-03-09 22:42:38,774 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 17:43:15] 2026-03-09 22:42:38,774 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 17:43:15] 2026-03-09 22:42:38,774 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 17:43:15] 2026-03-09 22:42:38,774 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 17:43:15] 2026-03-09 22:42:38,774 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 17:43:15] 2026-03-09 22:42:38,774 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 17:43:15] 2026-03-09 22:42:38,774 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 17:43:15] 2026-03-09 22:42:38,774 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 17:43:15] 2026-03-09 22:42:38,774 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 17:43:15] 2026-03-09 22:42:38,774 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 17:43:15] 2026-03-09 22:42:38,775 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 17:43:15] 2026-03-09 22:42:38,775 | INFO     | job 7034857297 has completed (purged errors)
[2026-03-09 17:43:15] 2026-03-09 22:42:38,775 | INFO     | overall cleanup function is called
[2026-03-09 17:43:15] 2026-03-09 22:42:39,220 | WARNING  | process 2574626 can no longer be monitored (due to stat problems) - aborting
[2026-03-09 17:43:15] 2026-03-09 22:42:39,343 | INFO     | using path: /var/lib/boinc-client/slots/5/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 17:43:15] 2026-03-09 22:42:39,343 | INFO     | using path: /var/lib/boinc-client/slots/5/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 17:43:15] 2026-03-09 22:42:39,343 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-09 17:43:15] 2026-03-09 22:42:39,344 | WARNING  | maxPSS not found in memory monitor output
[2026-03-09 17:43:15] 2026-03-09 22:42:39,344 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc-client/slots/5/PanDA_Pilot-7034857297/payload.stdout) since it has not been created yet
[2026-03-09 17:43:15] 2026-03-09 22:42:39,344 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2026-03-09 17:43:15] 2026-03-09 22:42:39,358 | INFO     | sufficient remaining disk space (1801242804224 B)
[2026-03-09 17:43:15] 2026-03-09 22:42:39,358 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-09 17:43:15] 2026-03-09 22:42:39,358 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/5/PanDA_Pilot-7034857297/HITS.48700922._002596.pool.root.1 since it does not exist
[2026-03-09 17:43:15] 2026-03-09 22:42:39,527 | INFO     | number of running child processes to parent process 2574626: 1
[2026-03-09 17:43:15] 2026-03-09 22:42:39,528 | INFO     | maximum number of monitored processes: 6
[2026-03-09 17:43:15] 2026-03-09 22:42:39,528 | INFO     | aborting job monitoring since job object (job id=7034857297) has expired
[2026-03-09 17:43:15] 2026-03-09 22:42:39,783 | INFO     | --- collectZombieJob: --- 10, [2574626]
[2026-03-09 17:43:15] 2026-03-09 22:42:39,783 | INFO     | zombie collector waiting for pid 2574626
[2026-03-09 17:43:15] 2026-03-09 22:42:39,783 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 17:43:15] 2026-03-09 22:42:39,783 | INFO     | collected zombie processes
[2026-03-09 17:43:15] 2026-03-09 22:42:39,783 | INFO     | will attempt to kill all subprocesses of pid=2574626
[2026-03-09 17:43:15] 2026-03-09 22:42:39,948 | INFO     | process IDs to be killed: [2574626] (in reverse order)
[2026-03-09 17:43:15] 2026-03-09 22:42:40,004 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 17:43:15] 2026-03-09 22:42:40,004 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 17:43:15] 2026-03-09 22:42:40,009 | INFO     | did not find any defunct processes belonging to 2574626
[2026-03-09 17:43:15] 2026-03-09 22:42:40,012 | INFO     | did not find any defunct processes belonging to 2574626
[2026-03-09 17:43:15] 2026-03-09 22:42:40,013 | INFO     | ready for new job
[2026-03-09 17:43:15] 2026-03-09 22:42:40,013 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 17:43:15] 2026-03-09 22:42:40,014 | INFO     | **************************************
[2026-03-09 17:43:15] 2026-03-09 22:42:40,014 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 17:43:15] 2026-03-09 22:42:40,014 | INFO     | **************************************
[2026-03-09 17:43:15] 2026-03-09 22:42:40,014 | INFO     | 
[2026-03-09 17:43:15] 2026-03-09 22:42:40,015 | INFO     | architecture information:
[2026-03-09 17:43:15] 2026-03-09 22:42:40,016 | INFO     | executing command: cat /etc/os-release
[2026-03-09 17:43:15] 2026-03-09 22:42:40,028 | INFO     | cat /etc/os-release:
[2026-03-09 17:43:15] NAME="CentOS Linux"
[2026-03-09 17:43:15] VERSION="7 (Core)"
[2026-03-09 17:43:15] ID="centos"
[2026-03-09 17:43:15] ID_LIKE="rhel fedora"
[2026-03-09 17:43:15] VERSION_ID="7"
[2026-03-09 17:43:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 17:43:15] ANSI_COLOR="0;31"
[2026-03-09 17:43:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 17:43:15] HOME_URL="https://www.centos.org/"
[2026-03-09 17:43:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 17:43:15] 
[2026-03-09 17:43:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 17:43:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 17:43:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 17:43:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 17:43:15] 
[2026-03-09 17:43:15] 2026-03-09 22:42:40,028 | INFO     | **************************************
[2026-03-09 17:43:15] 2026-03-09 22:42:40,530 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2026-03-09 17:43:15] 2026-03-09 22:42:40,543 | INFO     | sufficient remaining disk space (1801243852800 B)
[2026-03-09 17:43:15] 2026-03-09 22:42:40,544 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 17:43:15] 2026-03-09 22:42:40,544 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 17:43:15] 2026-03-09 22:42:40,544 | INFO     | update_server=False
[2026-03-09 17:43:15] 2026-03-09 22:42:40,544 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 17:43:15] 2026-03-09 22:42:40,544 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 17:43:15] 2026-03-09 22:42:40,544 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 17:43:15] 2026-03-09 22:42:40,544 | INFO     | aborting loop
[2026-03-09 17:43:15] 2026-03-09 22:42:40,769 | INFO     | all data control threads have been joined
[2026-03-09 17:43:15] 2026-03-09 22:42:40,773 | INFO     | all job control threads have been joined
[2026-03-09 17:43:15] 2026-03-09 22:42:41,062 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 17:43:15] 2026-03-09 22:42:41,312 | INFO     | all payload control threads have been joined
[2026-03-09 17:43:15] 2026-03-09 22:42:41,548 | INFO     | [job] retrieve thread has finished
[2026-03-09 17:43:15] 2026-03-09 22:42:41,549 | INFO     | [job] queue monitor thread has finished
[2026-03-09 17:43:15] 2026-03-09 22:42:41,550 | INFO     | [job] job monitor thread has finished
[2026-03-09 17:43:15] 2026-03-09 22:42:41,771 | INFO     | [data] control thread has finished
[2026-03-09 17:43:15] 2026-03-09 22:42:41,778 | INFO     | [job] control thread has finished
[2026-03-09 17:43:15] 2026-03-09 22:42:41,885 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 17:43:15] 2026-03-09 22:42:41,938 | INFO     | [job] validate thread has finished
[2026-03-09 17:43:15] 2026-03-09 22:42:41,999 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 17:43:15] 2026-03-09 22:42:42,210 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 17:43:15] 2026-03-09 22:42:42,215 | INFO     | [payload] failed_post thread has finished
[2026-03-09 17:43:15] 2026-03-09 22:42:42,317 | INFO     | [payload] control thread has finished
[2026-03-09 17:43:15] 2026-03-09 22:42:42,392 | INFO     | [data] copytool_in thread has finished
[2026-03-09 17:43:15] 2026-03-09 22:42:42,467 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 17:43:15] 2026-03-09 22:42:43,068 | INFO     | [data] copytool_out thread has finished
[2026-03-09 17:43:15] 2026-03-09 22:42:43,119 | INFO     | [payload] validate_post thread has finished
[2026-03-09 17:43:15] 2026-03-09 22:42:45,887 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 17:43:15] 2026-03-09 22:42:51,521 | INFO     | job.realtimelogging is not enabled
[2026-03-09 17:43:15] 2026-03-09 22:42:52,526 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 17:43:15] 2026-03-09 22:43:09,380 | INFO     | [monitor] cgroup control has ended
[2026-03-09 17:43:15] 2026-03-09 22:43:10,140 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128818378880832)>', '<ExcThread(monitor, started 128817746147072)>']
[2026-03-09 17:43:15] 2026-03-09 22:43:10,181 | INFO     | PID=2569899 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 17:43:15] 2026-03-09 22:43:10,182 | INFO     | .. there are 8 such processes running
[2026-03-09 17:43:15] 2026-03-09 22:43:10,182 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 17:43:15] 2026-03-09 22:43:10,182 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 17:43:15] 2026-03-09 22:43:10,182 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 17:43:15] 2026-03-09 22:43:10,182 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 17:43:15] 2026-03-09 22:43:10,182 | INFO     | [monitor] control thread has ended
[2026-03-09 17:43:15] 2026-03-09 22:43:15,162 | INFO     | all workflow threads have been joined
[2026-03-09 17:43:15] 2026-03-09 22:43:15,162 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 17:43:15] 2026-03-09 22:43:15,162 | INFO     | traces error code: 0
[2026-03-09 17:43:15] 2026-03-09 22:43:15,162 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 17:43:15] 2026-03-09 22:43:15,234 [wrapper] ==== pilot stdout END ====
[2026-03-09 17:43:15] 2026-03-09 22:43:15,236 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 17:43:15] 2026-03-09 22:43:15,238 [wrapper] pilotpid: 2569899
[2026-03-09 17:43:15] 2026-03-09 22:43:15,240 [wrapper] Pilot exit status: 0
[2026-03-09 17:43:15] 2026-03-09 22:43:15,247 [wrapper] pandaids: 7034857297
[2026-03-09 17:43:15] 2026-03-09 22:43:15,286 [wrapper] cleanup supervisor_pilot 2684182 2569900
[2026-03-09 17:43:15] 2026-03-09 22:43:15,289 [wrapper] Test setup, not cleaning
[2026-03-09 17:43:15] 2026-03-09 22:43:15,291 [wrapper] apfmon messages muted
[2026-03-09 17:43:15] 2026-03-09 22:43:15,293 [wrapper] ==== wrapper stdout END ====
[2026-03-09 17:43:15] 2026-03-09 22:43:15,295 [wrapper] ==== wrapper stderr END ====
[2026-03-09 17:43:15]  *** Error codes and diagnostics ***
[2026-03-09 17:43:15]     "exeErrorCode": 0,
[2026-03-09 17:43:15]     "exeErrorDiag": "",
[2026-03-09 17:43:15]     "pilotErrorCode": 0,
[2026-03-09 17:43:15]     "pilotErrorDiag": "",
[2026-03-09 17:43:15]  *** Listing of results directory ***
[2026-03-09 17:43:15] total 334176
[2026-03-09 17:43:15] -rw-r--r-- 1 boinc boinc    584627 Mar  1 04:14 pilot3.tar.gz
[2026-03-09 17:43:15] -rwx------ 1 boinc boinc     36322 Mar  1 04:17 runpilot2-wrapper.sh
[2026-03-09 17:43:15] -rw-r--r-- 1 boinc boinc      5111 Mar  1 04:20 queuedata.json
[2026-03-09 17:43:15] -rw-r--r-- 1 boinc boinc       100 Mar  9 16:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 17:43:15] -rwxr-xr-x 1 boinc boinc      7986 Mar  9 16:04 run_atlas
[2026-03-09 17:43:15] -rw-r--r-- 1 boinc boinc       105 Mar  9 16:04 job.xml
[2026-03-09 17:43:15] -rw-r--r-- 1 boinc boinc      9665 Mar  9 16:04 init_data.xml
[2026-03-09 17:43:15] -rw-r--r-- 2 boinc boinc 191347930 Mar  9 16:04 EVNT.48700920._000103.pool.root.1
[2026-03-09 17:43:15] -rw-r--r-- 2 boinc boinc     15845 Mar  9 16:04 start_atlas.sh
[2026-03-09 17:43:15] drwxrwx--x 2 boinc boinc      4096 Mar  9 16:04 shared
[2026-03-09 17:43:15] -rw-r--r-- 2 boinc boinc    597931 Mar  9 16:04 input.tar.gz
[2026-03-09 17:43:15] -rw-r--r-- 1 boinc boinc         0 Mar  9 16:04 boinc_lockfile
[2026-03-09 17:43:15] -rw-r--r-- 1 boinc boinc      2517 Mar  9 16:04 pandaJob.out
[2026-03-09 17:43:15] -rw------- 1 boinc boinc   1002738 Mar  9 16:04 agis_schedconf.cvmfs.json
[2026-03-09 17:43:15] -rw------- 1 boinc boinc   1511578 Mar  9 16:04 agis_ddmendpoints.agis.ALL.json
[2026-03-09 17:43:15] -rw------- 1 boinc boinc       432 Mar  9 16:04 workernode_map.json
[2026-03-09 17:43:15] drwx------ 5 boinc boinc      4096 Mar  9 16:05 pilot3
[2026-03-09 17:43:15] -rw------- 1 boinc boinc 144594021 Mar  9 17:42 HITS.48700922._002596.pool.root.1
[2026-03-09 17:43:15] -rw-r--r-- 1 boinc boinc       529 Mar  9 17:42 boinc_task_state.xml
[2026-03-09 17:43:15] -rw------- 1 boinc boinc        95 Mar  9 17:42 pilot_heartbeat.json
[2026-03-09 17:43:15] -rw------- 1 boinc boinc      1026 Mar  9 17:42 memory_monitor_summary.json
[2026-03-09 17:43:15] -rw------- 1 boinc boinc    294674 Mar  9 17:42 log.48700922._002596.job.log.tgz.1
[2026-03-09 17:43:15] -rw------- 1 boinc boinc      6308 Mar  9 17:42 heartbeat.json
[2026-03-09 17:43:15] -rw-r--r-- 1 boinc boinc        27 Mar  9 17:43 wrapper_checkpoint.txt
[2026-03-09 17:43:15] -rw-r--r-- 1 boinc boinc      8192 Mar  9 17:43 boinc_mmap_file
[2026-03-09 17:43:15] -rw------- 1 boinc boinc      4900 Mar  9 17:43 pilotlog.txt
[2026-03-09 17:43:15] -rw------- 1 boinc boinc    860231 Mar  9 17:43 log.48700922._002596.job.log.1
[2026-03-09 17:43:15] -rw------- 1 boinc boinc       357 Mar  9 17:43 output.list
[2026-03-09 17:43:15] -rw-r--r-- 1 boinc boinc       620 Mar  9 17:43 runtime_log
[2026-03-09 17:43:15] -rw------- 1 boinc boinc   1177600 Mar  9 17:43 result.tar.gz
[2026-03-09 17:43:15] -rw------- 1 boinc boinc       651 Mar  9 17:43 vOVKDmq2sG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmOz7KDm08SvNn.diag
[2026-03-09 17:43:15] -rw-r--r-- 1 boinc boinc      8932 Mar  9 17:43 runtime_log.err
[2026-03-09 17:43:15] -rw-r--r-- 1 boinc boinc     22190 Mar  9 17:43 stderr.txt
[2026-03-09 17:43:15] HITS file was successfully produced:
[2026-03-09 17:43:15] -rw------- 1 boinc boinc 144594021 Mar  9 17:42 shared/HITS.pool.root.1
[2026-03-09 17:43:15]  *** Contents of shared directory: ***
[2026-03-09 17:43:15] total 329832
[2026-03-09 17:43:15] -rw-r--r-- 2 boinc boinc 191347930 Mar  9 16:04 ATLAS.root_0
[2026-03-09 17:43:15] -rw-r--r-- 2 boinc boinc     15845 Mar  9 16:04 start_atlas.sh
[2026-03-09 17:43:15] -rw-r--r-- 2 boinc boinc    597931 Mar  9 16:04 input.tar.gz
[2026-03-09 17:43:15] -rw------- 1 boinc boinc 144594021 Mar  9 17:42 HITS.pool.root.1
[2026-03-09 17:43:15] -rw------- 1 boinc boinc   1177600 Mar  9 17:43 result.tar.gz
17:43:16 (2565613): run_atlas exited; CPU time 22418.538090
17:43:16 (2565613): called boinc_finish(0)

</stderr_txt>
]]>

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