Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:52:10 (2265896): wrapper (7.7.26015): starting
08:52:10 (2265896): wrapper: running run_atlas (--nthreads 8)
[2026-03-09 08:52:11] Arguments: --nthreads 8
[2026-03-09 08:52:11] Threads: 8
[2026-03-09 08:52:11] Checking for CVMFS
[2026-03-09 08:52:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 08:52:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 08:52:11] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 08:52:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 08:52:12] 2.13.3.0 7385 178330 315808 157077 1 736 18782427 32500661 47345 16776704 0 2029380849 99.618 2022156939 46614 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-09 08:52:12] CVMFS is ok
[2026-03-09 08:52:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 08:52:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 08:52:12] Further information can be found at the LHC@home message board.
[2026-03-09 08:52:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 08:52:12] Checking for apptainer binary...
[2026-03-09 08:52:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 08:52:12] Running /usr/bin/apptainer --version
[2026-03-09 08:52:12] apptainer version 1.4.5-2.el9
[2026-03-09 08:52:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 08:52:13] c8-7-1.aglt2.org
[2026-03-09 08:52:13] apptainer works
[2026-03-09 08:52:13] Set ATHENA_PROC_NUMBER=8
[2026-03-09 08:52:13] Set ATHENA_CORE_NUMBER=8
[2026-03-09 08:52:13] Starting ATLAS job with PandaID=7034609463
[2026-03-09 08:52:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 09:53:55]  *** The last 200 lines of the pilot log: ***
[2026-03-09 09:53:55]  ddmendpoint_alt=None
[2026-03-09 09:53:55]  direct_access_lan=False
[2026-03-09 09:53:55]  direct_access_wan=False
[2026-03-09 09:53:55]  domain=
[2026-03-09 09:53:55]  filesize=310986
[2026-03-09 09:53:55]  filetype=log
[2026-03-09 09:53:55]  guid=7af5e0f7-bf5c-46cb-a96c-6a84ae78a106
[2026-03-09 09:53:55]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-09 09:53:55]  is_altstaged=None
[2026-03-09 09:53:55]  is_tar=False
[2026-03-09 09:53:55]  lfn=log.48700922._001881.job.log.tgz.1
[2026-03-09 09:53:55]  mtime=0
[2026-03-09 09:53:55]  protocol_id=None
[2026-03-09 09:53:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-09 09:53:55]  replicas=None
[2026-03-09 09:53:55]  scope=mc23_13p6TeV
[2026-03-09 09:53:55]  status=None
[2026-03-09 09:53:55]  status_code=0
[2026-03-09 09:53:55]  storage_token=
[2026-03-09 09:53:55]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-7034609463/log.48700922._001881.job.log.tgz.1
[2026-03-09 09:53:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d9/61/log.48700922._001881.job.log.tgz.1
[2026-03-09 09:53:55]  workdir=None
[2026-03-09 09:53:55] ]
[2026-03-09 09:53:55] 2026-03-09 13:53:16,448 | INFO     | transferring file log.48700922._001881.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-7034609463/log.48700922._001881.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-09 09:53:55] 2026-03-09 13:53:16,448 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-7034609463/log.48700922._001881.job.log.tgz.1 /tmp/boinchome/slots/1/log.48700922._001881.job
[2026-03-09 09:53:55] 2026-03-09 13:53:16,477 | INFO     | adding to output.list: log.48700922._001881.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d9/61/log.48700922._001881.job.log.tg
[2026-03-09 09:53:55] 2026-03-09 13:53:16,477 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-09 09:53:55] 2026-03-09 13:53:16,477 | INFO     | summary of transferred files:
[2026-03-09 09:53:55] 2026-03-09 13:53:16,477 | INFO     |  -- lfn=log.48700922._001881.job.log.tgz.1, status_code=0, status=transferred
[2026-03-09 09:53:55] 2026-03-09 13:53:16,477 | INFO     | stage-out finished correctly
[2026-03-09 09:53:55] 2026-03-09 13:53:16,541 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-09 09:53:55] 2026-03-09 13:53:16,589 | INFO     | job 7034609463 has state=finished
[2026-03-09 09:53:55] 2026-03-09 13:53:16,589 | INFO     | preparing for final server update for job 7034609463 in state='finished'
[2026-03-09 09:53:55] 2026-03-09 13:53:16,589 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-7034609463/jobReport.json
[2026-03-09 09:53:55] 2026-03-09 13:53:16,591 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-03-09 09:53:55] 2026-03-09 13:53:16,591 | INFO     | this job has now completed (state=finished)
[2026-03-09 09:53:55] 2026-03-09 13:53:16,591 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 09:53:55] 2026-03-09 13:53:16,591 | INFO     | log transfer has been attempted: DONE
[2026-03-09 09:53:55] 2026-03-09 13:53:16,591 | INFO     | job 7034609463 has finished - writing final server update
[2026-03-09 09:53:55] 2026-03-09 13:53:16,592 | INFO     | total number of processed events: 400 (read)
[2026-03-09 09:53:55] 2026-03-09 13:53:16,604 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7034609463/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 09:53:55] 2026-03-09 13:53:16,604 | INFO     | extracted standard info from prmon json
[2026-03-09 09:53:55] 2026-03-09 13:53:16,604 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 09:53:55] 2026-03-09 13:53:16,604 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 09:53:55] 2026-03-09 13:53:16,605 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 09:53:55] 2026-03-09 13:53:16,605 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 09:53:55] 2026-03-09 13:53:16,605 | INFO     | fitting pss+swap vs Time
[2026-03-09 09:53:55] 2026-03-09 13:53:16,606 | INFO     | sum of square deviations: 41121692.50980388
[2026-03-09 09:53:55] 2026-03-09 13:53:16,606 | INFO     | sum of deviations: -1591332328.4117646
[2026-03-09 09:53:55] 2026-03-09 13:53:16,606 | INFO     | mean x: 1773062731.0980392
[2026-03-09 09:53:55] 2026-03-09 13:53:16,606 | INFO     | mean y: 2529656.882352941
[2026-03-09 09:53:55] 2026-03-09 13:53:16,606 | INFO     | intersect: 68616729902.30464
[2026-03-09 09:53:55] 2026-03-09 13:53:16,606 | INFO     | chi2: 0.04483105851281703
[2026-03-09 09:53:55] 2026-03-09 13:53:16,606 | INFO     | current memory leak: -38.70 B/s (using 51 data points, chi2=0.04)
[2026-03-09 09:53:55] 2026-03-09 13:53:16,606 | INFO     | could have reported an average CPU frequency of 3788 MHz (5 samples)
[2026-03-09 09:53:55] 2026-03-09 13:53:16,606 | INFO     | ..............................
[2026-03-09 09:53:55] 2026-03-09 13:53:16,606 | INFO     | . Timing measurements:
[2026-03-09 09:53:55] 2026-03-09 13:53:16,606 | INFO     | . get job = 0 s
[2026-03-09 09:53:55] 2026-03-09 13:53:16,606 | INFO     | . initial setup = 33 s
[2026-03-09 09:53:55] 2026-03-09 13:53:16,606 | INFO     | . payload setup = 38 s
[2026-03-09 09:53:55] 2026-03-09 13:53:16,606 | INFO     | . stage-in = 0 s
[2026-03-09 09:53:55] 2026-03-09 13:53:16,607 | INFO     | . payload execution = 3517 s
[2026-03-09 09:53:55] 2026-03-09 13:53:16,607 | INFO     | . stage-out = 0 s
[2026-03-09 09:53:55] 2026-03-09 13:53:16,607 | INFO     | . log creation = 0 s
[2026-03-09 09:53:55] 2026-03-09 13:53:16,607 | INFO     | ..............................
[2026-03-09 09:53:55] 2026-03-09 13:53:16,657 | INFO     | 
[2026-03-09 09:53:55] 2026-03-09 13:53:16,657 | INFO     | job summary report
[2026-03-09 09:53:55] 2026-03-09 13:53:16,657 | INFO     | --------------------------------------------------
[2026-03-09 09:53:55] 2026-03-09 13:53:16,657 | INFO     | PanDA job id: 7034609463
[2026-03-09 09:53:55] 2026-03-09 13:53:16,657 | INFO     | task id: 48700922
[2026-03-09 09:53:55] 2026-03-09 13:53:16,657 | INFO     | errors: (none)
[2026-03-09 09:53:55] 2026-03-09 13:53:16,657 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 09:53:55] 2026-03-09 13:53:16,657 | INFO     | pilot state: finished 
[2026-03-09 09:53:55] 2026-03-09 13:53:16,657 | INFO     | transexitcode: 0
[2026-03-09 09:53:55] 2026-03-09 13:53:16,657 | INFO     | exeerrorcode: 0
[2026-03-09 09:53:55] 2026-03-09 13:53:16,657 | INFO     | exeerrordiag: 
[2026-03-09 09:53:55] 2026-03-09 13:53:16,657 | INFO     | exitcode: 0
[2026-03-09 09:53:55] 2026-03-09 13:53:16,657 | INFO     | exitmsg: OK
[2026-03-09 09:53:55] 2026-03-09 13:53:16,657 | INFO     | cpuconsumptiontime: 17620 s
[2026-03-09 09:53:55] 2026-03-09 13:53:16,657 | INFO     | nevents: 400
[2026-03-09 09:53:55] 2026-03-09 13:53:16,658 | INFO     | neventsw: 0
[2026-03-09 09:53:55] 2026-03-09 13:53:16,658 | INFO     | pid: 2294007
[2026-03-09 09:53:55] 2026-03-09 13:53:16,658 | INFO     | pgrp: 2294007
[2026-03-09 09:53:55] 2026-03-09 13:53:16,658 | INFO     | corecount: 8
[2026-03-09 09:53:55] 2026-03-09 13:53:16,658 | INFO     | event service: False
[2026-03-09 09:53:55] 2026-03-09 13:53:16,658 | INFO     | sizes: {0: 2279082, 1: 2280140, 2: 2280228, 12: 2280228, 3559: 2305862, 3560: 2305861, 3561: 2315269}
[2026-03-09 09:53:55] 2026-03-09 13:53:16,658 | INFO     | --------------------------------------------------
[2026-03-09 09:53:55] 2026-03-09 13:53:16,658 | INFO     | 
[2026-03-09 09:53:55] 2026-03-09 13:53:16,658 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-09 09:53:55] 2026-03-09 13:53:16,710 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 09:53:55] 2026-03-09 13:53:16,710 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 09:53:55] 2026-03-09 13:53:16,710 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 09:53:55] 2026-03-09 13:53:16,710 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 09:53:55] 2026-03-09 13:53:16,710 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 09:53:55] 2026-03-09 13:53:16,710 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 09:53:55] 2026-03-09 13:53:16,710 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 09:53:55] 2026-03-09 13:53:16,710 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 09:53:55] 2026-03-09 13:53:16,710 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 09:53:55] 2026-03-09 13:53:16,710 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 09:53:55] 2026-03-09 13:53:16,710 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 09:53:55] 2026-03-09 13:53:16,710 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 09:53:55] 2026-03-09 13:53:16,711 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 09:53:55] 2026-03-09 13:53:16,711 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 09:53:55] 2026-03-09 13:53:16,711 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 09:53:55] 2026-03-09 13:53:16,711 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 09:53:55] 2026-03-09 13:53:16,711 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 09:53:55] 2026-03-09 13:53:16,711 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 09:53:55] 2026-03-09 13:53:16,711 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 09:53:55] 2026-03-09 13:53:16,711 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 09:53:55] 2026-03-09 13:53:16,711 | INFO     | job 7034609463 has completed (purged errors)
[2026-03-09 09:53:55] 2026-03-09 13:53:16,711 | INFO     | overall cleanup function is called
[2026-03-09 09:53:55] 2026-03-09 13:53:17,719 | INFO     | --- collectZombieJob: --- 10, [2294007]
[2026-03-09 09:53:55] 2026-03-09 13:53:17,719 | INFO     | zombie collector waiting for pid 2294007
[2026-03-09 09:53:55] 2026-03-09 13:53:17,719 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 09:53:55] 2026-03-09 13:53:17,719 | INFO     | collected zombie processes
[2026-03-09 09:53:55] 2026-03-09 13:53:17,719 | INFO     | will attempt to kill all subprocesses of pid=2294007
[2026-03-09 09:53:55] 2026-03-09 13:53:18,292 | INFO     | process IDs to be killed: [2294007] (in reverse order)
[2026-03-09 09:53:55] 2026-03-09 13:53:18,560 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 09:53:55] 2026-03-09 13:53:18,560 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 09:53:55] 2026-03-09 13:53:18,637 | INFO     | did not find any defunct processes belonging to 2294007
[2026-03-09 09:53:55] 2026-03-09 13:53:18,668 | INFO     | did not find any defunct processes belonging to 2294007
[2026-03-09 09:53:55] 2026-03-09 13:53:18,668 | INFO     | ready for new job
[2026-03-09 09:53:55] 2026-03-09 13:53:18,668 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 09:53:55] 2026-03-09 13:53:18,669 | INFO     | **************************************
[2026-03-09 09:53:55] 2026-03-09 13:53:18,670 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 09:53:55] 2026-03-09 13:53:18,670 | INFO     | **************************************
[2026-03-09 09:53:55] 2026-03-09 13:53:18,670 | INFO     | 
[2026-03-09 09:53:55] 2026-03-09 13:53:18,684 | INFO     | architecture information:
[2026-03-09 09:53:55] 2026-03-09 13:53:18,684 | INFO     | executing command: cat /etc/os-release
[2026-03-09 09:53:55] 2026-03-09 13:53:18,693 | INFO     | cat /etc/os-release:
[2026-03-09 09:53:55] NAME="CentOS Linux"
[2026-03-09 09:53:55] VERSION="7 (Core)"
[2026-03-09 09:53:55] ID="centos"
[2026-03-09 09:53:55] ID_LIKE="rhel fedora"
[2026-03-09 09:53:55] VERSION_ID="7"
[2026-03-09 09:53:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 09:53:55] ANSI_COLOR="0;31"
[2026-03-09 09:53:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 09:53:55] HOME_URL="https://www.centos.org/"
[2026-03-09 09:53:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 09:53:55] 
[2026-03-09 09:53:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 09:53:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 09:53:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 09:53:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 09:53:55] 
[2026-03-09 09:53:55] 2026-03-09 13:53:18,693 | INFO     | **************************************
[2026-03-09 09:53:55] 2026-03-09 13:53:19,197 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-09 09:53:55] 2026-03-09 13:53:19,294 | INFO     | sufficient remaining disk space (91843723264 B)
[2026-03-09 09:53:55] 2026-03-09 13:53:19,294 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 09:53:55] 2026-03-09 13:53:19,295 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 09:53:55] 2026-03-09 13:53:19,295 | INFO     | update_server=False
[2026-03-09 09:53:55] 2026-03-09 13:53:19,295 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 09:53:55] 2026-03-09 13:53:19,295 | INFO     | all payload control threads have been joined
[2026-03-09 09:53:55] 2026-03-09 13:53:19,295 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 09:53:55] 2026-03-09 13:53:19,295 | INFO     | aborting loop
[2026-03-09 09:53:55] 2026-03-09 13:53:19,549 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 09:53:55] 2026-03-09 13:53:20,301 | INFO     | [payload] control thread has finished
[2026-03-09 09:53:55] 2026-03-09 13:53:20,302 | INFO     | [job] job monitor thread has finished
[2026-03-09 09:53:55] 2026-03-09 13:53:20,321 | INFO     | [job] retrieve thread has finished
[2026-03-09 09:53:55] 2026-03-09 13:53:20,377 | INFO     | all data control threads have been joined
[2026-03-09 09:53:55] 2026-03-09 13:53:20,485 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 09:53:55] 2026-03-09 13:53:20,502 | INFO     | [data] copytool_in thread has finished
[2026-03-09 09:53:55] 2026-03-09 13:53:20,563 | INFO     | [job] validate thread has finished
[2026-03-09 09:53:55] 2026-03-09 13:53:20,563 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 09:53:55] 2026-03-09 13:53:20,625 | INFO     | all job control threads have been joined
[2026-03-09 09:53:55] 2026-03-09 13:53:21,178 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 09:53:55] 2026-03-09 13:53:21,383 | INFO     | [data] control thread has finished
[2026-03-09 09:53:55] 2026-03-09 13:53:21,441 | INFO     | [payload] validate_post thread has finished
[2026-03-09 09:53:55] 2026-03-09 13:53:21,555 | INFO     | [data] copytool_out thread has finished
[2026-03-09 09:53:55] 2026-03-09 13:53:21,631 | INFO     | [job] control thread has finished
[2026-03-09 09:53:55] 2026-03-09 13:53:21,636 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 09:53:55] 2026-03-09 13:53:21,671 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 09:53:55] 2026-03-09 13:53:21,861 | INFO     | [payload] failed_post thread has finished
[2026-03-09 09:53:55] 2026-03-09 13:53:22,602 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 09:53:55] 2026-03-09 13:53:22,677 | INFO     | [job] queue monitor thread has finished
[2026-03-09 09:53:55] 2026-03-09 13:53:26,611 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 09:53:55] 2026-03-09 13:53:49,137 | INFO     | [monitor] cgroup control has ended
[2026-03-09 09:53:55] 2026-03-09 13:53:49,529 | INFO     | PID=2278627 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 09:53:55] 2026-03-09 13:53:49,529 | INFO     | .. there are 65 such processes running
[2026-03-09 09:53:55] 2026-03-09 13:53:49,532 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 09:53:55] 2026-03-09 13:53:49,532 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 09:53:55] 2026-03-09 13:53:49,532 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 09:53:55] 2026-03-09 13:53:49,623 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140037991606080)>', '<ExcThread(monitor, started 140037635155712)>']
[2026-03-09 09:53:55] 2026-03-09 13:53:50,546 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 09:53:55] 2026-03-09 13:53:50,546 | INFO     | [monitor] control thread has ended
[2026-03-09 09:53:55] 2026-03-09 13:53:54,649 | INFO     | all workflow threads have been joined
[2026-03-09 09:53:55] 2026-03-09 13:53:54,649 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 09:53:55] 2026-03-09 13:53:54,649 | INFO     | traces error code: 0
[2026-03-09 09:53:55] 2026-03-09 13:53:54,649 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 09:53:55] 2026-03-09 13:53:55,109 [wrapper] ==== pilot stdout END ====
[2026-03-09 09:53:55] 2026-03-09 13:53:55,123 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 09:53:55] 2026-03-09 13:53:55,157 [wrapper] pilotpid: 2278627
[2026-03-09 09:53:55] 2026-03-09 13:53:55,179 [wrapper] Pilot exit status: 0
[2026-03-09 09:53:55] 2026-03-09 13:53:55,275 [wrapper] pandaids: 7034609463
[2026-03-09 09:53:55] 2026-03-09 13:53:55,504 [wrapper] cleanup supervisor_pilot 2821049 2278628
[2026-03-09 09:53:55] 2026-03-09 13:53:55,525 [wrapper] Test setup, not cleaning
[2026-03-09 09:53:55] 2026-03-09 13:53:55,566 [wrapper] apfmon messages muted
[2026-03-09 09:53:55] 2026-03-09 13:53:55,573 [wrapper] ==== wrapper stdout END ====
[2026-03-09 09:53:55] 2026-03-09 13:53:55,579 [wrapper] ==== wrapper stderr END ====
[2026-03-09 09:53:55]  *** Error codes and diagnostics ***
[2026-03-09 09:53:55]     "exeErrorCode": 0,
[2026-03-09 09:53:55]     "exeErrorDiag": "",
[2026-03-09 09:53:55]     "pilotErrorCode": 0,
[2026-03-09 09:53:55]     "pilotErrorDiag": "",
[2026-03-09 09:53:55]  *** Listing of results directory ***
[2026-03-09 09:53:55] total 331784
[2026-03-09 09:53:55] -rw-r--r--. 1 boincer umatlas    584627 Mar  1 04:10 pilot3.tar.gz
[2026-03-09 09:53:55] -rw-r--r--. 1 boincer umatlas      5111 Mar  1 04:18 queuedata.json
[2026-03-09 09:53:55] -rwx------. 1 boincer umatlas     36322 Mar  1 04:18 runpilot2-wrapper.sh
[2026-03-09 09:53:55] -rw-r--r--. 1 boincer umatlas       100 Mar  9 08:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 09:53:55] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  9 08:52 run_atlas
[2026-03-09 09:53:55] -rw-r--r--. 1 boincer umatlas       105 Mar  9 08:52 job.xml
[2026-03-09 09:53:55] -rw-r--r--. 2 boincer umatlas 188141349 Mar  9 08:52 EVNT.48700920._000075.pool.root.1
[2026-03-09 09:53:55] -rw-r--r--. 2 boincer umatlas     15845 Mar  9 08:52 start_atlas.sh
[2026-03-09 09:53:55] drwxrwx--x. 2 boincer umatlas      4096 Mar  9 08:52 shared
[2026-03-09 09:53:55] -rw-r--r--. 2 boincer umatlas    597932 Mar  9 08:52 input.tar.gz
[2026-03-09 09:53:55] -rw-r--r--. 1 boincer umatlas         0 Mar  9 08:52 boinc_lockfile
[2026-03-09 09:53:55] -rw-r--r--. 1 boincer umatlas      2516 Mar  9 08:52 pandaJob.out
[2026-03-09 09:53:55] -rw-------. 1 boincer umatlas        57 Mar  9 08:52 setup.sh.local
[2026-03-09 09:53:55] -rw-------. 1 boincer umatlas    990720 Mar  9 08:53 agis_schedconf.cvmfs.json
[2026-03-09 09:53:55] -rw-------. 1 boincer umatlas   1511578 Mar  9 08:53 agis_ddmendpoints.agis.ALL.json
[2026-03-09 09:53:55] -rw-------. 1 boincer umatlas       430 Mar  9 08:53 workernode_map.json
[2026-03-09 09:53:55] drwx------. 5 boincer umatlas      4096 Mar  9 08:53 pilot3
[2026-03-09 09:53:55] -rw-r--r--. 1 boincer umatlas      7171 Mar  9 09:48 init_data.xml
[2026-03-09 09:53:55] -rw-r--r--. 1 boincer umatlas       529 Mar  9 09:52 boinc_task_state.xml
[2026-03-09 09:53:55] -rw-------. 1 boincer umatlas 146080477 Mar  9 09:52 HITS.48700922._001881.pool.root.1
[2026-03-09 09:53:55] -rw-------. 1 boincer umatlas      1034 Mar  9 09:53 memory_monitor_summary.json
[2026-03-09 09:53:55] -rw-------. 1 boincer umatlas    310986 Mar  9 09:53 log.48700922._001881.job.log.tgz.1
[2026-03-09 09:53:55] -rw-------. 1 boincer umatlas      6327 Mar  9 09:53 heartbeat.json
[2026-03-09 09:53:55] -rw-------. 1 boincer umatlas        95 Mar  9 09:53 pilot_heartbeat.json
[2026-03-09 09:53:55] -rw-r--r--. 1 boincer umatlas        27 Mar  9 09:53 wrapper_checkpoint.txt
[2026-03-09 09:53:55] -rw-r--r--. 1 boincer umatlas      8192 Mar  9 09:53 boinc_mmap_file
[2026-03-09 09:53:55] -rw-------. 1 boincer umatlas      4820 Mar  9 09:53 pilotlog.txt
[2026-03-09 09:53:55] -rw-------. 1 boincer umatlas    493971 Mar  9 09:53 log.48700922._001881.job.log.1
[2026-03-09 09:53:55] -rw-------. 1 boincer umatlas       357 Mar  9 09:53 output.list
[2026-03-09 09:53:55] -rw-r--r--. 1 boincer umatlas       620 Mar  9 09:53 runtime_log
[2026-03-09 09:53:55] -rw-------. 1 boincer umatlas    819200 Mar  9 09:53 result.tar.gz
[2026-03-09 09:53:55] -rw-r--r--. 1 boincer umatlas      9331 Mar  9 09:53 runtime_log.err
[2026-03-09 09:53:55] -rw-------. 1 boincer umatlas       650 Mar  9 09:53 ncFODmL7rG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmzR9KDmukbJxm.diag
[2026-03-09 09:53:55] -rw-r--r--. 1 boincer umatlas     20915 Mar  9 09:53 stderr.txt
[2026-03-09 09:53:55] HITS file was successfully produced:
[2026-03-09 09:53:55] -rw-------. 1 boincer umatlas 146080477 Mar  9 09:52 shared/HITS.pool.root.1
[2026-03-09 09:53:55]  *** Contents of shared directory: ***
[2026-03-09 09:53:55] total 327796
[2026-03-09 09:53:55] -rw-r--r--. 2 boincer umatlas 188141349 Mar  9 08:52 ATLAS.root_0
[2026-03-09 09:53:55] -rw-r--r--. 2 boincer umatlas     15845 Mar  9 08:52 start_atlas.sh
[2026-03-09 09:53:55] -rw-r--r--. 2 boincer umatlas    597932 Mar  9 08:52 input.tar.gz
[2026-03-09 09:53:55] -rw-------. 1 boincer umatlas 146080477 Mar  9 09:52 HITS.pool.root.1
[2026-03-09 09:53:55] -rw-------. 1 boincer umatlas    819200 Mar  9 09:53 result.tar.gz
09:53:57 (2265896): run_atlas exited; CPU time 17754.579832
09:53:57 (2265896): called boinc_finish(0)

</stderr_txt>
]]>

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