Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:05:35 (4157617): wrapper (7.7.26015): starting
05:05:35 (4157617): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 05:05:35] Arguments: --nthreads 4
[2026-03-10 05:05:35] Threads: 4
[2026-03-10 05:05:35] Checking for CVMFS
[2026-03-10 05:05:35] No cvmfs_config command found, will try listing directly
[2026-03-10 05:05:35] CVMFS is ok
[2026-03-10 05:05:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 05:05:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 05:05:35] Further information can be found at the LHC@home message board.
[2026-03-10 05:05:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 05:05:35] Checking for apptainer binary...
[2026-03-10 05:05:35] which: no apptainer in ((null))
[2026-03-10 05:05:35] apptainer is not installed, using version from CVMFS
[2026-03-10 05:05:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 05:05:35] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot44/slots/12/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-10 05:05:35] apptainer works
[2026-03-10 05:05:35] Set ATHENA_PROC_NUMBER=4
[2026-03-10 05:05:35] Set ATHENA_CORE_NUMBER=4
[2026-03-10 05:05:35] Starting ATLAS job with PandaID=7047266881
[2026-03-10 05:05:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot44/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 06:35:01]  *** The last 200 lines of the pilot log: ***
[2026-03-10 06:35:01]  is_altstaged=None
[2026-03-10 06:35:01]  is_tar=False
[2026-03-10 06:35:01]  lfn=log.48958635._002565.job.log.tgz.1
[2026-03-10 06:35:01]  mtime=0
[2026-03-10 06:35:01]  protocol_id=None
[2026-03-10 06:35:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-10 06:35:01]  replicas=None
[2026-03-10 06:35:01]  scope=mc23_13p6TeV
[2026-03-10 06:35:01]  status=None
[2026-03-10 06:35:01]  status_code=0
[2026-03-10 06:35:01]  storage_token=
[2026-03-10 06:35:01]  surl=/var/lib/boinc/var/slot44/slots/12/PanDA_Pilot-7047266881/log.48958635._002565.job.log.tgz.1
[2026-03-10 06:35:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/81/d7/log.48958635._002565.job.log.tgz.1
[2026-03-10 06:35:01]  workdir=None
[2026-03-10 06:35:01] ]
[2026-03-10 06:35:01] 2026-03-10 05:34:24,132 | INFO     | transferring file log.48958635._002565.job.log.tgz.1 from /var/lib/boinc/var/slot44/slots/12/PanDA_Pilot-7047266881/log.48958635._002565.job.log.tgz.1 to /var/lib/
[2026-03-10 06:35:01] 2026-03-10 05:34:24,132 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot44/slots/12/PanDA_Pilot-7047266881/log.48958635._002565.job.log.tgz.1 /var/lib/boinc/var/slot44/slots/12/
[2026-03-10 06:35:01] 2026-03-10 05:34:24,146 | INFO     | adding to output.list: log.48958635._002565.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/81/d7/log.48958635._002565.job.log.tg
[2026-03-10 06:35:01] 2026-03-10 05:34:24,147 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 06:35:01] 2026-03-10 05:34:24,147 | INFO     | summary of transferred files:
[2026-03-10 06:35:01] 2026-03-10 05:34:24,147 | INFO     |  -- lfn=log.48958635._002565.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 06:35:01] 2026-03-10 05:34:24,147 | INFO     | stage-out finished correctly
[2026-03-10 06:35:01] 2026-03-10 05:34:24,666 | INFO     | time since job start (5317s) is within the limit (349056.0s)
[2026-03-10 06:35:01] 2026-03-10 05:34:25,452 | INFO     | monitor loop #386: job 0:7047266881 is in state 'finished'
[2026-03-10 06:35:01] 2026-03-10 05:34:25,452 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-10 06:35:01] 2026-03-10 05:34:26,568 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 06:35:01] 2026-03-10 05:34:26,671 | INFO     | time since job start (5319s) is within the limit (349056.0s)
[2026-03-10 06:35:01] 2026-03-10 05:34:27,954 | INFO     | monitor loop #387: job 0:7047266881 is in state 'finished'
[2026-03-10 06:35:01] 2026-03-10 05:34:27,955 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-10 06:35:01] 2026-03-10 05:34:28,161 | INFO     | job 7047266881 has state=finished
[2026-03-10 06:35:01] 2026-03-10 05:34:28,161 | INFO     | preparing for final server update for job 7047266881 in state='finished'
[2026-03-10 06:35:01] 2026-03-10 05:34:28,161 | INFO     | reading metadata from: /var/lib/boinc/var/slot44/slots/12/PanDA_Pilot-7047266881/jobReport.json
[2026-03-10 06:35:01] 2026-03-10 05:34:28,163 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot44/slots/12/workernode_map.json
[2026-03-10 06:35:01] 2026-03-10 05:34:28,164 | INFO     | this job has now completed (state=finished)
[2026-03-10 06:35:01] 2026-03-10 05:34:28,164 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 06:35:01] 2026-03-10 05:34:28,164 | INFO     | log transfer has been attempted: DONE
[2026-03-10 06:35:01] 2026-03-10 05:34:28,164 | INFO     | job 7047266881 has finished - writing final server update
[2026-03-10 06:35:01] 2026-03-10 05:34:28,164 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3695367/.job.ad'
[2026-03-10 06:35:01] 2026-03-10 05:34:28,164 | INFO     | total number of processed events: 400 (read)
[2026-03-10 06:35:01] 2026-03-10 05:34:28,182 | INFO     | using path: /var/lib/boinc/var/slot44/slots/12/PanDA_Pilot-7047266881/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 06:35:01] 2026-03-10 05:34:28,183 | INFO     | extracted standard info from prmon json
[2026-03-10 06:35:01] 2026-03-10 05:34:28,183 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 06:35:01] 2026-03-10 05:34:28,183 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 06:35:01] 2026-03-10 05:34:28,183 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 06:35:01] 2026-03-10 05:34:28,183 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 06:35:01] 2026-03-10 05:34:28,184 | INFO     | fitting pss+swap vs Time
[2026-03-10 06:35:01] 2026-03-10 05:34:28,185 | INFO     | sum of square deviations: 158737860.0
[2026-03-10 06:35:01] 2026-03-10 05:34:28,185 | INFO     | sum of deviations: 1347655981.0
[2026-03-10 06:35:01] 2026-03-10 05:34:28,185 | INFO     | mean x: 1773118281.5
[2026-03-10 06:35:01] 2026-03-10 05:34:28,185 | INFO     | mean y: 2346237.525
[2026-03-10 06:35:01] 2026-03-10 05:34:28,185 | INFO     | intersect: -15051110178.505281
[2026-03-10 06:35:01] 2026-03-10 05:34:28,185 | INFO     | chi2: 0.00014443155946845769
[2026-03-10 06:35:01] 2026-03-10 05:34:28,185 | INFO     | current memory leak: 8.49 B/s (using 80 data points, chi2=0.00)
[2026-03-10 06:35:01] 2026-03-10 05:34:28,185 | INFO     | could have reported an average CPU frequency of 3553 MHz (6 samples)
[2026-03-10 06:35:01] 2026-03-10 05:34:28,186 | INFO     | ..............................
[2026-03-10 06:35:01] 2026-03-10 05:34:28,186 | INFO     | . Timing measurements:
[2026-03-10 06:35:01] 2026-03-10 05:34:28,186 | INFO     | . get job = 0 s
[2026-03-10 06:35:01] 2026-03-10 05:34:28,186 | INFO     | . initial setup = 4 s
[2026-03-10 06:35:01] 2026-03-10 05:34:28,186 | INFO     | . payload setup = 5 s
[2026-03-10 06:35:01] 2026-03-10 05:34:28,186 | INFO     | . stage-in = 0 s
[2026-03-10 06:35:01] 2026-03-10 05:34:28,186 | INFO     | . payload execution = 5296 s
[2026-03-10 06:35:01] 2026-03-10 05:34:28,186 | INFO     | . stage-out = 0 s
[2026-03-10 06:35:01] 2026-03-10 05:34:28,186 | INFO     | . log creation = 0 s
[2026-03-10 06:35:01] 2026-03-10 05:34:28,186 | INFO     | ..............................
[2026-03-10 06:35:01] 2026-03-10 05:34:28,579 | INFO     | 
[2026-03-10 06:35:01] 2026-03-10 05:34:28,580 | INFO     | job summary report
[2026-03-10 06:35:01] 2026-03-10 05:34:28,580 | INFO     | --------------------------------------------------
[2026-03-10 06:35:01] 2026-03-10 05:34:28,580 | INFO     | PanDA job id: 7047266881
[2026-03-10 06:35:01] 2026-03-10 05:34:28,580 | INFO     | task id: 48958635
[2026-03-10 06:35:01] 2026-03-10 05:34:28,580 | INFO     | errors: (none)
[2026-03-10 06:35:01] 2026-03-10 05:34:28,580 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 06:35:01] 2026-03-10 05:34:28,580 | INFO     | pilot state: finished 
[2026-03-10 06:35:01] 2026-03-10 05:34:28,580 | INFO     | transexitcode: 0
[2026-03-10 06:35:01] 2026-03-10 05:34:28,580 | INFO     | exeerrorcode: 0
[2026-03-10 06:35:01] 2026-03-10 05:34:28,580 | INFO     | exeerrordiag: 
[2026-03-10 06:35:01] 2026-03-10 05:34:28,580 | INFO     | exitcode: 0
[2026-03-10 06:35:01] 2026-03-10 05:34:28,580 | INFO     | exitmsg: OK
[2026-03-10 06:35:01] 2026-03-10 05:34:28,580 | INFO     | cpuconsumptiontime: 20394 s
[2026-03-10 06:35:01] 2026-03-10 05:34:28,580 | INFO     | nevents: 400
[2026-03-10 06:35:01] 2026-03-10 05:34:28,580 | INFO     | neventsw: 0
[2026-03-10 06:35:01] 2026-03-10 05:34:28,580 | INFO     | pid: 4167993
[2026-03-10 06:35:01] 2026-03-10 05:34:28,580 | INFO     | pgrp: 4167993
[2026-03-10 06:35:01] 2026-03-10 05:34:28,580 | INFO     | corecount: 4
[2026-03-10 06:35:01] 2026-03-10 05:34:28,580 | INFO     | event service: False
[2026-03-10 06:35:01] 2026-03-10 05:34:28,580 | INFO     | sizes: {0: 2280198, 11: 2280198, 5305: 2306633, 5306: 2315655, 5308: 2315711, 5310: 2315905}
[2026-03-10 06:35:01] 2026-03-10 05:34:28,580 | INFO     | --------------------------------------------------
[2026-03-10 06:35:01] 2026-03-10 05:34:28,580 | INFO     | 
[2026-03-10 06:35:01] 2026-03-10 05:34:28,580 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot44/slots/12
[2026-03-10 06:35:01] 2026-03-10 05:34:28,597 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 06:35:01] 2026-03-10 05:34:28,598 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 06:35:01] 2026-03-10 05:34:28,598 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 06:35:01] 2026-03-10 05:34:28,598 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 06:35:01] 2026-03-10 05:34:28,598 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 06:35:01] 2026-03-10 05:34:28,598 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 06:35:01] 2026-03-10 05:34:28,598 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 06:35:01] 2026-03-10 05:34:28,598 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 06:35:01] 2026-03-10 05:34:28,598 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 06:35:01] 2026-03-10 05:34:28,598 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 06:35:01] 2026-03-10 05:34:28,598 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 06:35:01] 2026-03-10 05:34:28,598 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 06:35:01] 2026-03-10 05:34:28,598 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 06:35:01] 2026-03-10 05:34:28,598 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 06:35:01] 2026-03-10 05:34:28,598 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 06:35:01] 2026-03-10 05:34:28,598 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 06:35:01] 2026-03-10 05:34:28,598 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 06:35:01] 2026-03-10 05:34:28,598 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 06:35:01] 2026-03-10 05:34:28,598 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 06:35:01] 2026-03-10 05:34:28,598 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 06:35:01] 2026-03-10 05:34:28,598 | INFO     | job 7047266881 has completed (purged errors)
[2026-03-10 06:35:01] 2026-03-10 05:34:28,598 | INFO     | overall cleanup function is called
[2026-03-10 06:35:01] 2026-03-10 05:34:29,605 | INFO     | --- collectZombieJob: --- 10, [4167993]
[2026-03-10 06:35:01] 2026-03-10 05:34:29,605 | INFO     | zombie collector waiting for pid 4167993
[2026-03-10 06:35:01] 2026-03-10 05:34:29,606 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 06:35:01] 2026-03-10 05:34:29,606 | INFO     | collected zombie processes
[2026-03-10 06:35:01] 2026-03-10 05:34:29,607 | INFO     | will attempt to kill all subprocesses of pid=4167993
[2026-03-10 06:35:01] 2026-03-10 05:34:30,026 | INFO     | process IDs to be killed: [4167993] (in reverse order)
[2026-03-10 06:35:01] 2026-03-10 05:34:30,220 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 06:35:01] 2026-03-10 05:34:30,220 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 06:35:01] 2026-03-10 05:34:30,244 | INFO     | did not find any defunct processes belonging to 4167993
[2026-03-10 06:35:01] 2026-03-10 05:34:30,269 | INFO     | did not find any defunct processes belonging to 4167993
[2026-03-10 06:35:01] 2026-03-10 05:34:30,269 | INFO     | ready for new job
[2026-03-10 06:35:01] 2026-03-10 05:34:30,269 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 06:35:01] 2026-03-10 05:34:30,270 | INFO     | **************************************
[2026-03-10 06:35:01] 2026-03-10 05:34:30,270 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 06:35:01] 2026-03-10 05:34:30,270 | INFO     | **************************************
[2026-03-10 06:35:01] 2026-03-10 05:34:30,270 | INFO     | 
[2026-03-10 06:35:01] 2026-03-10 05:34:30,276 | INFO     | architecture information:
[2026-03-10 06:35:01] 2026-03-10 05:34:30,276 | INFO     | executing command: cat /etc/os-release
[2026-03-10 06:35:01] 2026-03-10 05:34:30,290 | INFO     | cat /etc/os-release:
[2026-03-10 06:35:01] NAME="CentOS Linux"
[2026-03-10 06:35:01] VERSION="7 (Core)"
[2026-03-10 06:35:01] ID="centos"
[2026-03-10 06:35:01] ID_LIKE="rhel fedora"
[2026-03-10 06:35:01] VERSION_ID="7"
[2026-03-10 06:35:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 06:35:01] ANSI_COLOR="0;31"
[2026-03-10 06:35:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 06:35:01] HOME_URL="https://www.centos.org/"
[2026-03-10 06:35:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 06:35:01] 
[2026-03-10 06:35:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 06:35:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 06:35:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 06:35:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 06:35:01] 
[2026-03-10 06:35:01] 2026-03-10 05:34:30,290 | INFO     | **************************************
[2026-03-10 06:35:01] 2026-03-10 05:34:30,793 | INFO     | executing command: df -mP /var/lib/boinc/var/slot44/slots/12
[2026-03-10 06:35:01] 2026-03-10 05:34:30,807 | INFO     | sufficient remaining disk space (20332937216 B)
[2026-03-10 06:35:01] 2026-03-10 05:34:30,808 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 06:35:01] 2026-03-10 05:34:30,808 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 06:35:01] 2026-03-10 05:34:30,808 | INFO     | update_server=False
[2026-03-10 06:35:01] 2026-03-10 05:34:30,808 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 06:35:01] 2026-03-10 05:34:30,852 | INFO     | all data control threads have been joined
[2026-03-10 06:35:01] 2026-03-10 05:34:31,462 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 06:35:01] 2026-03-10 05:34:31,463 | INFO     | aborting loop
[2026-03-10 06:35:01] 2026-03-10 05:34:31,813 | INFO     | [job] retrieve thread has finished
[2026-03-10 06:35:01] 2026-03-10 05:34:31,858 | INFO     | [data] control thread has finished
[2026-03-10 06:35:01] 2026-03-10 05:34:31,858 | INFO     | all payload control threads have been joined
[2026-03-10 06:35:01] 2026-03-10 05:34:31,884 | INFO     | all job control threads have been joined
[2026-03-10 06:35:01] 2026-03-10 05:34:31,895 | INFO     | [data] copytool_in thread has finished
[2026-03-10 06:35:01] 2026-03-10 05:34:31,999 | INFO     | [payload] failed_post thread has finished
[2026-03-10 06:35:01] 2026-03-10 05:34:32,212 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 06:35:01] 2026-03-10 05:34:32,468 | INFO     | [job] job monitor thread has finished
[2026-03-10 06:35:01] 2026-03-10 05:34:32,620 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 06:35:01] 2026-03-10 05:34:32,702 | INFO     | [payload] validate_post thread has finished
[2026-03-10 06:35:01] 2026-03-10 05:34:32,715 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 06:35:01] 2026-03-10 05:34:32,726 | INFO     | [job] validate thread has finished
[2026-03-10 06:35:01] 2026-03-10 05:34:32,863 | INFO     | [payload] control thread has finished
[2026-03-10 06:35:01] 2026-03-10 05:34:32,890 | INFO     | [job] control thread has finished
[2026-03-10 06:35:01] 2026-03-10 05:34:32,928 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 06:35:01] 2026-03-10 05:34:33,227 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 06:35:01] 2026-03-10 05:34:33,245 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 06:35:01] 2026-03-10 05:34:34,214 | INFO     | [data] copytool_out thread has finished
[2026-03-10 06:35:01] 2026-03-10 05:34:34,250 | INFO     | [job] queue monitor thread has finished
[2026-03-10 06:35:01] 2026-03-10 05:34:36,626 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 06:35:01] 2026-03-10 05:34:41,049 | INFO     | job.realtimelogging is not enabled
[2026-03-10 06:35:01] 2026-03-10 05:34:42,054 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 06:35:01] 2026-03-10 05:34:55,588 | INFO     | [monitor] cgroup control has ended
[2026-03-10 06:35:01] 2026-03-10 05:34:56,418 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22545855739712)>', '<ExcThread(monitor, started 22545531086592)>']
[2026-03-10 06:35:01] 2026-03-10 05:35:00,267 | INFO     | PID=4162173 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 06:35:01] 2026-03-10 05:35:00,267 | INFO     | .. there are 59 such processes running
[2026-03-10 06:35:01] 2026-03-10 05:35:00,268 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 06:35:01] 2026-03-10 05:35:00,268 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 06:35:01] 2026-03-10 05:35:00,268 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 06:35:01] 2026-03-10 05:35:00,268 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 06:35:01] 2026-03-10 05:35:00,268 | INFO     | [monitor] control thread has ended
[2026-03-10 06:35:01] 2026-03-10 05:35:01,443 | INFO     | all workflow threads have been joined
[2026-03-10 06:35:01] 2026-03-10 05:35:01,444 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 06:35:01] 2026-03-10 05:35:01,444 | INFO     | traces error code: 0
[2026-03-10 06:35:01] 2026-03-10 05:35:01,444 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 06:35:01] 2026-03-10 05:35:01,639 [wrapper] ==== pilot stdout END ====
[2026-03-10 06:35:01] 2026-03-10 05:35:01,641 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 06:35:01] 2026-03-10 05:35:01,647 [wrapper] pilotpid: 4162173
[2026-03-10 06:35:01] 2026-03-10 05:35:01,648 [wrapper] Pilot exit status: 0
[2026-03-10 06:35:01] 2026-03-10 05:35:01,655 [wrapper] pandaids: 7047266881
[2026-03-10 06:35:01] 2026-03-10 05:35:01,745 [wrapper] cleanup supervisor_pilot  808935 4162174
[2026-03-10 06:35:01] 2026-03-10 05:35:01,748 [wrapper] Test setup, not cleaning
[2026-03-10 06:35:01] 2026-03-10 05:35:01,751 [wrapper] apfmon messages muted
[2026-03-10 06:35:01] 2026-03-10 05:35:01,752 [wrapper] ==== wrapper stdout END ====
[2026-03-10 06:35:01] 2026-03-10 05:35:01,755 [wrapper] ==== wrapper stderr END ====
[2026-03-10 06:35:01]  *** Error codes and diagnostics ***
[2026-03-10 06:35:01]     "exeErrorCode": 0,
[2026-03-10 06:35:01]     "exeErrorDiag": "",
[2026-03-10 06:35:01]     "pilotErrorCode": 0,
[2026-03-10 06:35:01]     "pilotErrorDiag": "",
[2026-03-10 06:35:01]  *** Listing of results directory ***
[2026-03-10 06:35:01] total 450400
[2026-03-10 06:35:01] -rw-r--r--. 1 boinc boinc    584627 Mar  9 13:35 pilot3.tar.gz
[2026-03-10 06:35:01] -rwx------. 1 boinc boinc     36322 Mar  9 13:36 runpilot2-wrapper.sh
[2026-03-10 06:35:01] -rw-r--r--. 1 boinc boinc      5111 Mar  9 13:36 queuedata.json
[2026-03-10 06:35:01] -rw-r--r--. 1 boinc boinc       100 Mar 10 05:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 06:35:01] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 05:05 run_atlas
[2026-03-10 06:35:01] -rw-r--r--. 1 boinc boinc       105 Mar 10 05:05 job.xml
[2026-03-10 06:35:01] -rw-r--r--. 1 boinc boinc      6707 Mar 10 05:05 init_data.xml
[2026-03-10 06:35:01] -rw-r--r--. 2 boinc boinc 266679095 Mar 10 05:05 EVNT.48958633._000100.pool.root.1
[2026-03-10 06:35:01] -rw-r--r--. 2 boinc boinc     15845 Mar 10 05:05 start_atlas.sh
[2026-03-10 06:35:01] drwxrwx--x. 2 boinc boinc      4096 Mar 10 05:05 shared
[2026-03-10 06:35:01] -rw-r--r--. 2 boinc boinc    597928 Mar 10 05:05 input.tar.gz
[2026-03-10 06:35:01] -rw-r--r--. 1 boinc boinc         0 Mar 10 05:05 boinc_lockfile
[2026-03-10 06:35:01] -rw-r--r--. 1 boinc boinc      2526 Mar 10 05:05 pandaJob.out
[2026-03-10 06:35:01] -rw-------. 1 boinc boinc   1006495 Mar 10 05:05 agis_schedconf.cvmfs.json
[2026-03-10 06:35:01] -rw-------. 1 boinc boinc   1511578 Mar 10 05:05 agis_ddmendpoints.agis.ALL.json
[2026-03-10 06:35:01] -rw-------. 1 boinc boinc       444 Mar 10 05:05 workernode_map.json
[2026-03-10 06:35:01] drwx------. 5 boinc boinc      4096 Mar 10 05:05 pilot3
[2026-03-10 06:35:01] -rw-------. 1 boinc boinc 188503661 Mar 10 06:33 HITS.48958635._002565.pool.root.1
[2026-03-10 06:35:01] -rw-r--r--. 1 boinc boinc       529 Mar 10 06:34 boinc_task_state.xml
[2026-03-10 06:35:01] -rw-------. 1 boinc boinc      1032 Mar 10 06:34 memory_monitor_summary.json
[2026-03-10 06:35:01] -rw-------. 1 boinc boinc    274748 Mar 10 06:34 log.48958635._002565.job.log.tgz.1
[2026-03-10 06:35:01] -rw-------. 1 boinc boinc      6349 Mar 10 06:34 heartbeat.json
[2026-03-10 06:35:01] -rw-r--r--. 1 boinc boinc      8192 Mar 10 06:35 boinc_mmap_file
[2026-03-10 06:35:01] -rw-------. 1 boinc boinc        95 Mar 10 06:35 pilot_heartbeat.json
[2026-03-10 06:35:01] -rw-r--r--. 1 boinc boinc        27 Mar 10 06:35 wrapper_checkpoint.txt
[2026-03-10 06:35:01] -rw-------. 1 boinc boinc      4902 Mar 10 06:35 pilotlog.txt
[2026-03-10 06:35:01] -rw-------. 1 boinc boinc    774967 Mar 10 06:35 log.48958635._002565.job.log.1
[2026-03-10 06:35:01] -rw-------. 1 boinc boinc       357 Mar 10 06:35 output.list
[2026-03-10 06:35:01] -rw-r--r--. 1 boinc boinc       620 Mar 10 06:35 runtime_log
[2026-03-10 06:35:01] -rw-------. 1 boinc boinc   1064960 Mar 10 06:35 result.tar.gz
[2026-03-10 06:35:01] -rw-------. 1 boinc boinc       663 Mar 10 06:35 tnjNDmJ1oJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmTRcLDmwhhgin.diag
[2026-03-10 06:35:01] -rw-r--r--. 1 boinc boinc      9221 Mar 10 06:35 runtime_log.err
[2026-03-10 06:35:01] -rw-r--r--. 1 boinc boinc     12049 Mar 10 06:35 stderr.txt
[2026-03-10 06:35:01] HITS file was successfully produced:
[2026-03-10 06:35:01] -rw-------. 1 boinc boinc 188503661 Mar 10 06:33 shared/HITS.pool.root.1
[2026-03-10 06:35:01]  *** Contents of shared directory: ***
[2026-03-10 06:35:01] total 446168
[2026-03-10 06:35:01] -rw-r--r--. 2 boinc boinc 266679095 Mar 10 05:05 ATLAS.root_0
[2026-03-10 06:35:01] -rw-r--r--. 2 boinc boinc     15845 Mar 10 05:05 start_atlas.sh
[2026-03-10 06:35:01] -rw-r--r--. 2 boinc boinc    597928 Mar 10 05:05 input.tar.gz
[2026-03-10 06:35:01] -rw-------. 1 boinc boinc 188503661 Mar 10 06:33 HITS.pool.root.1
[2026-03-10 06:35:01] -rw-------. 1 boinc boinc   1064960 Mar 10 06:35 result.tar.gz
06:35:03 (4157617): run_atlas exited; CPU time 20626.325501
06:35:03 (4157617): called boinc_finish(0)

</stderr_txt>
]]>

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