Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:12:53 (2458486): wrapper (7.7.26015): starting
15:12:53 (2458486): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 15:12:53] Arguments: --nthreads 4
[2026-03-10 15:12:53] Threads: 4
[2026-03-10 15:12:53] Checking for CVMFS
[2026-03-10 15:12:53] No cvmfs_config command found, will try listing directly
[2026-03-10 15:12:53] CVMFS is ok
[2026-03-10 15:12:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 15:12:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 15:12:53] Further information can be found at the LHC@home message board.
[2026-03-10 15:12:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 15:12:53] Checking for apptainer binary...
[2026-03-10 15:12:53] which: no apptainer in ((null))
[2026-03-10 15:12:53] apptainer is not installed, using version from CVMFS
[2026-03-10 15:12:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 15:12:53] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut21.grid.cesnet.cz
[2026-03-10 15:12:53] apptainer works
[2026-03-10 15:12:53] Set ATHENA_PROC_NUMBER=4
[2026-03-10 15:12:53] Set ATHENA_CORE_NUMBER=4
[2026-03-10 15:12:53] Starting ATLAS job with PandaID=7047266797
[2026-03-10 15:12:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
16:03:17 (3337916): wrapper (7.7.26015): starting
16:03:17 (3337916): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 16:03:17] Arguments: --nthreads 4
[2026-03-10 16:03:17] Threads: 4
[2026-03-10 16:03:17] This job has been restarted, cleaning up previous attempt
[2026-03-10 16:03:17] Checking for CVMFS
[2026-03-10 16:03:17] No cvmfs_config command found, will try listing directly
[2026-03-10 16:03:17] CVMFS is ok
[2026-03-10 16:03:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 16:03:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 16:03:17] Further information can be found at the LHC@home message board.
[2026-03-10 16:03:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 16:03:17] Checking for apptainer binary...
[2026-03-10 16:03:17] which: no apptainer in ((null))
[2026-03-10 16:03:17] apptainer is not installed, using version from CVMFS
[2026-03-10 16:03:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 16:03:17] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut21.grid.cesnet.cz
[2026-03-10 16:03:17] apptainer works
[2026-03-10 16:03:17] Set ATHENA_PROC_NUMBER=4
[2026-03-10 16:03:17] Set ATHENA_CORE_NUMBER=4
[2026-03-10 16:03:17] Starting ATLAS job with PandaID=7047266797
[2026-03-10 16:03:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 17:35:18]  *** The last 200 lines of the pilot log: ***
[2026-03-10 17:35:18]  is_altstaged=None
[2026-03-10 17:35:18]  is_tar=False
[2026-03-10 17:35:18]  lfn=log.48958635._002481.job.log.tgz.1
[2026-03-10 17:35:18]  mtime=0
[2026-03-10 17:35:18]  protocol_id=None
[2026-03-10 17:35:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-10 17:35:18]  replicas=None
[2026-03-10 17:35:18]  scope=mc23_13p6TeV
[2026-03-10 17:35:18]  status=None
[2026-03-10 17:35:18]  status_code=0
[2026-03-10 17:35:18]  storage_token=
[2026-03-10 17:35:18]  surl=/var/lib/boinc/var/slot124/slots/0/PanDA_Pilot-7047266797/log.48958635._002481.job.log.tgz.1
[2026-03-10 17:35:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dd/07/log.48958635._002481.job.log.tgz.1
[2026-03-10 17:35:18]  workdir=None
[2026-03-10 17:35:18] ]
[2026-03-10 17:35:18] 2026-03-10 16:31:44,779 | INFO     | transferring file log.48958635._002481.job.log.tgz.1 from /var/lib/boinc/var/slot124/slots/0/PanDA_Pilot-7047266797/log.48958635._002481.job.log.tgz.1 to /var/lib/
[2026-03-10 17:35:18] 2026-03-10 16:31:44,779 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot124/slots/0/PanDA_Pilot-7047266797/log.48958635._002481.job.log.tgz.1 /var/lib/boinc/var/slot124/slots/0/
[2026-03-10 17:35:18] 2026-03-10 16:31:44,794 | INFO     | adding to output.list: log.48958635._002481.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dd/07/log.48958635._002481.job.log.tg
[2026-03-10 17:35:18] 2026-03-10 16:31:44,795 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 17:35:18] 2026-03-10 16:31:44,795 | INFO     | summary of transferred files:
[2026-03-10 17:35:18] 2026-03-10 16:31:44,795 | INFO     |  -- lfn=log.48958635._002481.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 17:35:18] 2026-03-10 16:31:44,795 | INFO     | stage-out finished correctly
[2026-03-10 17:35:18] 2026-03-10 16:31:45,156 | INFO     | time since job start (5298s) is within the limit (349056.0s)
[2026-03-10 17:35:18] 2026-03-10 16:31:45,323 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 17:35:18] 2026-03-10 16:31:45,407 | INFO     | job 7047266797 has state=finished
[2026-03-10 17:35:18] 2026-03-10 16:31:45,407 | INFO     | preparing for final server update for job 7047266797 in state='finished'
[2026-03-10 17:35:18] 2026-03-10 16:31:45,407 | INFO     | reading metadata from: /var/lib/boinc/var/slot124/slots/0/PanDA_Pilot-7047266797/jobReport.json
[2026-03-10 17:35:18] 2026-03-10 16:31:45,408 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot124/slots/0/workernode_map.json
[2026-03-10 17:35:18] 2026-03-10 16:31:45,409 | INFO     | this job has now completed (state=finished)
[2026-03-10 17:35:18] 2026-03-10 16:31:45,409 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 17:35:18] 2026-03-10 16:31:45,409 | INFO     | log transfer has been attempted: DONE
[2026-03-10 17:35:18] 2026-03-10 16:31:45,409 | INFO     | job 7047266797 has finished - writing final server update
[2026-03-10 17:35:18] 2026-03-10 16:31:45,409 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3269047/.job.ad'
[2026-03-10 17:35:18] 2026-03-10 16:31:45,409 | INFO     | total number of processed events: 400 (read)
[2026-03-10 17:35:18] 2026-03-10 16:31:45,425 | INFO     | using path: /var/lib/boinc/var/slot124/slots/0/PanDA_Pilot-7047266797/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 17:35:18] 2026-03-10 16:31:45,425 | INFO     | extracted standard info from prmon json
[2026-03-10 17:35:18] 2026-03-10 16:31:45,425 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 17:35:18] 2026-03-10 16:31:45,425 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 17:35:18] 2026-03-10 16:31:45,426 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 17:35:18] 2026-03-10 16:31:45,426 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 17:35:18] 2026-03-10 16:31:45,427 | INFO     | fitting pss+swap vs Time
[2026-03-10 17:35:18] 2026-03-10 16:31:45,427 | INFO     | sum of square deviations: 158737860.0
[2026-03-10 17:35:18] 2026-03-10 16:31:45,427 | INFO     | sum of deviations: 1097428033.5
[2026-03-10 17:35:18] 2026-03-10 16:31:45,427 | INFO     | mean x: 1773157743.5
[2026-03-10 17:35:18] 2026-03-10 16:31:45,427 | INFO     | mean y: 2335141.4625
[2026-03-10 17:35:18] 2026-03-10 16:31:45,427 | INFO     | intersect: -12256322090.873268
[2026-03-10 17:35:18] 2026-03-10 16:31:45,427 | INFO     | chi2: 0.0004177313256228126
[2026-03-10 17:35:18] 2026-03-10 16:31:45,427 | INFO     | current memory leak: 6.91 B/s (using 80 data points, chi2=0.00)
[2026-03-10 17:35:18] 2026-03-10 16:31:45,428 | INFO     | could have reported an average CPU frequency of 3746 MHz (6 samples)
[2026-03-10 17:35:18] 2026-03-10 16:31:45,428 | INFO     | ..............................
[2026-03-10 17:35:18] 2026-03-10 16:31:45,428 | INFO     | . Timing measurements:
[2026-03-10 17:35:18] 2026-03-10 16:31:45,428 | INFO     | . get job = 0 s
[2026-03-10 17:35:18] 2026-03-10 16:31:45,428 | INFO     | . initial setup = 0 s
[2026-03-10 17:35:18] 2026-03-10 16:31:45,428 | INFO     | . payload setup = 5 s
[2026-03-10 17:35:18] 2026-03-10 16:31:45,428 | INFO     | . stage-in = 0 s
[2026-03-10 17:35:18] 2026-03-10 16:31:45,428 | INFO     | . payload execution = 5276 s
[2026-03-10 17:35:18] 2026-03-10 16:31:45,428 | INFO     | . stage-out = 0 s
[2026-03-10 17:35:18] 2026-03-10 16:31:45,428 | INFO     | . log creation = 0 s
[2026-03-10 17:35:18] 2026-03-10 16:31:45,428 | INFO     | ..............................
[2026-03-10 17:35:18] 2026-03-10 16:31:45,473 | INFO     | 
[2026-03-10 17:35:18] 2026-03-10 16:31:45,473 | INFO     | job summary report
[2026-03-10 17:35:18] 2026-03-10 16:31:45,474 | INFO     | --------------------------------------------------
[2026-03-10 17:35:18] 2026-03-10 16:31:45,474 | INFO     | PanDA job id: 7047266797
[2026-03-10 17:35:18] 2026-03-10 16:31:45,474 | INFO     | task id: 48958635
[2026-03-10 17:35:18] 2026-03-10 16:31:45,474 | INFO     | errors: (none)
[2026-03-10 17:35:18] 2026-03-10 16:31:45,474 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 17:35:18] 2026-03-10 16:31:45,474 | INFO     | pilot state: finished 
[2026-03-10 17:35:18] 2026-03-10 16:31:45,474 | INFO     | transexitcode: 0
[2026-03-10 17:35:18] 2026-03-10 16:31:45,474 | INFO     | exeerrorcode: 0
[2026-03-10 17:35:18] 2026-03-10 16:31:45,474 | INFO     | exeerrordiag: 
[2026-03-10 17:35:18] 2026-03-10 16:31:45,474 | INFO     | exitcode: 0
[2026-03-10 17:35:18] 2026-03-10 16:31:45,474 | INFO     | exitmsg: OK
[2026-03-10 17:35:18] 2026-03-10 16:31:45,474 | INFO     | cpuconsumptiontime: 20203 s
[2026-03-10 17:35:18] 2026-03-10 16:31:45,474 | INFO     | nevents: 400
[2026-03-10 17:35:18] 2026-03-10 16:31:45,474 | INFO     | neventsw: 0
[2026-03-10 17:35:18] 2026-03-10 16:31:45,474 | INFO     | pid: 3381972
[2026-03-10 17:35:18] 2026-03-10 16:31:45,474 | INFO     | pgrp: 3381972
[2026-03-10 17:35:18] 2026-03-10 16:31:45,474 | INFO     | corecount: 4
[2026-03-10 17:35:18] 2026-03-10 16:31:45,474 | INFO     | event service: False
[2026-03-10 17:35:18] 2026-03-10 16:31:45,474 | INFO     | sizes: {0: 2279765, 1: 2280226, 11: 2280226, 5285: 2306814, 5286: 2306813, 5287: 2316213}
[2026-03-10 17:35:18] 2026-03-10 16:31:45,474 | INFO     | --------------------------------------------------
[2026-03-10 17:35:18] 2026-03-10 16:31:45,474 | INFO     | 
[2026-03-10 17:35:18] 2026-03-10 16:31:45,474 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot124/slots/0
[2026-03-10 17:35:18] 2026-03-10 16:31:45,493 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 17:35:18] 2026-03-10 16:31:45,493 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 17:35:18] 2026-03-10 16:31:45,493 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 17:35:18] 2026-03-10 16:31:45,493 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 17:35:18] 2026-03-10 16:31:45,493 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 17:35:18] 2026-03-10 16:31:45,493 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 17:35:18] 2026-03-10 16:31:45,493 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 17:35:18] 2026-03-10 16:31:45,493 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 17:35:18] 2026-03-10 16:31:45,493 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 17:35:18] 2026-03-10 16:31:45,493 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 17:35:18] 2026-03-10 16:31:45,493 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 17:35:18] 2026-03-10 16:31:45,493 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 17:35:18] 2026-03-10 16:31:45,494 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 17:35:18] 2026-03-10 16:31:45,494 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 17:35:18] 2026-03-10 16:31:45,494 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 17:35:18] 2026-03-10 16:31:45,494 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 17:35:18] 2026-03-10 16:31:45,494 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 17:35:18] 2026-03-10 16:31:45,494 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 17:35:18] 2026-03-10 16:31:45,494 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 17:35:18] 2026-03-10 16:31:45,494 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 17:35:18] 2026-03-10 16:31:45,494 | INFO     | job 7047266797 has completed (purged errors)
[2026-03-10 17:35:18] 2026-03-10 16:31:45,494 | INFO     | overall cleanup function is called
[2026-03-10 17:35:18] 2026-03-10 16:31:46,501 | INFO     | --- collectZombieJob: --- 10, [3381972]
[2026-03-10 17:35:18] 2026-03-10 16:31:46,501 | INFO     | zombie collector waiting for pid 3381972
[2026-03-10 17:35:18] 2026-03-10 16:31:46,501 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 17:35:18] 2026-03-10 16:31:46,501 | INFO     | collected zombie processes
[2026-03-10 17:35:18] 2026-03-10 16:31:46,501 | INFO     | will attempt to kill all subprocesses of pid=3381972
[2026-03-10 17:35:18] 2026-03-10 16:31:47,136 | WARNING  | process 3381972 can no longer be monitored (due to stat problems) - aborting
[2026-03-10 17:35:18] 2026-03-10 16:31:47,357 | INFO     | process IDs to be killed: [3381972] (in reverse order)
[2026-03-10 17:35:18] 2026-03-10 16:31:47,518 | INFO     | using path: /var/lib/boinc/var/slot124/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 17:35:18] 2026-03-10 16:31:47,551 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 17:35:18] 2026-03-10 16:31:47,551 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 17:35:18] 2026-03-10 16:31:47,628 | INFO     | did not find any defunct processes belonging to 3381972
[2026-03-10 17:35:18] 2026-03-10 16:31:47,699 | INFO     | did not find any defunct processes belonging to 3381972
[2026-03-10 17:35:18] 2026-03-10 16:31:47,699 | INFO     | ready for new job
[2026-03-10 17:35:18] 2026-03-10 16:31:47,699 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 17:35:18] 2026-03-10 16:31:47,700 | INFO     | **************************************
[2026-03-10 17:35:18] 2026-03-10 16:31:47,700 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 17:35:18] 2026-03-10 16:31:47,700 | INFO     | **************************************
[2026-03-10 17:35:18] 2026-03-10 16:31:47,700 | INFO     | 
[2026-03-10 17:35:18] 2026-03-10 16:31:47,708 | INFO     | architecture information:
[2026-03-10 17:35:18] 2026-03-10 16:31:47,708 | INFO     | executing command: cat /etc/os-release
[2026-03-10 17:35:18] 2026-03-10 16:31:47,723 | INFO     | cat /etc/os-release:
[2026-03-10 17:35:18] NAME="CentOS Linux"
[2026-03-10 17:35:18] VERSION="7 (Core)"
[2026-03-10 17:35:18] ID="centos"
[2026-03-10 17:35:18] ID_LIKE="rhel fedora"
[2026-03-10 17:35:18] VERSION_ID="7"
[2026-03-10 17:35:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 17:35:18] ANSI_COLOR="0;31"
[2026-03-10 17:35:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 17:35:18] HOME_URL="https://www.centos.org/"
[2026-03-10 17:35:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 17:35:18] 
[2026-03-10 17:35:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 17:35:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 17:35:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 17:35:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 17:35:18] 
[2026-03-10 17:35:18] 2026-03-10 16:31:47,723 | INFO     | **************************************
[2026-03-10 17:35:18] 2026-03-10 16:31:47,889 | INFO     | number of running child processes to parent process 3381972: 1
[2026-03-10 17:35:18] 2026-03-10 16:31:47,890 | INFO     | maximum number of monitored processes: 6
[2026-03-10 17:35:18] 2026-03-10 16:31:47,890 | INFO     | aborting job monitoring since job object (job id=7047266797) has expired
[2026-03-10 17:35:18] 2026-03-10 16:31:48,226 | INFO     | executing command: df -mP /var/lib/boinc/var/slot124/slots/0
[2026-03-10 17:35:18] 2026-03-10 16:31:48,244 | INFO     | sufficient remaining disk space (18259902464 B)
[2026-03-10 17:35:18] 2026-03-10 16:31:48,244 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 17:35:18] 2026-03-10 16:31:48,244 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 17:35:18] 2026-03-10 16:31:48,244 | INFO     | update_server=False
[2026-03-10 17:35:18] 2026-03-10 16:31:48,245 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 17:35:18] 2026-03-10 16:31:48,245 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 17:35:18] 2026-03-10 16:31:48,245 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 17:35:18] 2026-03-10 16:31:48,245 | INFO     | will abort loop
[2026-03-10 17:35:18] 2026-03-10 16:31:48,667 | INFO     | all job control threads have been joined
[2026-03-10 17:35:18] 2026-03-10 16:31:48,861 | INFO     | all payload control threads have been joined
[2026-03-10 17:35:18] 2026-03-10 16:31:48,959 | INFO     | all data control threads have been joined
[2026-03-10 17:35:18] 2026-03-10 16:31:49,250 | INFO     | [job] retrieve thread has finished
[2026-03-10 17:35:18] 2026-03-10 16:31:49,250 | INFO     | [job] job monitor thread has finished
[2026-03-10 17:35:18] 2026-03-10 16:31:49,275 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 17:35:18] 2026-03-10 16:31:49,407 | INFO     | [data] copytool_in thread has finished
[2026-03-10 17:35:18] 2026-03-10 16:31:49,617 | INFO     | [payload] validate_post thread has finished
[2026-03-10 17:35:18] 2026-03-10 16:31:49,672 | INFO     | [job] control thread has finished
[2026-03-10 17:35:18] 2026-03-10 16:31:49,866 | INFO     | [payload] control thread has finished
[2026-03-10 17:35:18] 2026-03-10 16:31:49,965 | INFO     | [data] control thread has finished
[2026-03-10 17:35:18] 2026-03-10 16:31:50,017 | INFO     | [payload] failed_post thread has finished
[2026-03-10 17:35:18] 2026-03-10 16:31:50,127 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 17:35:18] 2026-03-10 16:31:50,237 | INFO     | [job] validate thread has finished
[2026-03-10 17:35:18] 2026-03-10 16:31:50,248 | INFO     | [data] copytool_out thread has finished
[2026-03-10 17:35:18] 2026-03-10 16:31:50,340 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 17:35:18] 2026-03-10 16:31:50,484 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 17:35:18] 2026-03-10 16:31:50,545 | INFO     | job.realtimelogging is not enabled
[2026-03-10 17:35:18] 2026-03-10 16:31:51,378 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 17:35:18] 2026-03-10 16:31:51,489 | INFO     | [job] queue monitor thread has finished
[2026-03-10 17:35:18] 2026-03-10 16:31:51,547 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 17:35:18] 2026-03-10 16:31:55,384 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 17:35:18] 2026-03-10 16:32:18,714 | INFO     | PID=3353675 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 17:35:18] 2026-03-10 16:32:18,714 | INFO     | .. there are 22 such processes running
[2026-03-10 17:35:18] 2026-03-10 16:32:18,714 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 17:35:18] 2026-03-10 16:32:18,715 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 17:35:18] 2026-03-10 16:32:18,715 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 17:35:18] 2026-03-10 16:32:35,859 | INFO     | [monitor] cgroup control has ended
[2026-03-10 17:35:18] 2026-03-10 16:32:35,997 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23222783317824)>', '<ExcThread(monitor, started 23222481311488)>']
[2026-03-10 17:35:18] 2026-03-10 16:32:36,803 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 17:35:18] 2026-03-10 16:32:36,804 | INFO     | [monitor] control thread has ended
[2026-03-10 17:35:18] 2026-03-10 16:32:41,022 | INFO     | all workflow threads have been joined
[2026-03-10 17:35:18] 2026-03-10 16:32:41,022 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 17:35:18] 2026-03-10 16:32:41,022 | INFO     | traces error code: 0
[2026-03-10 17:35:18] 2026-03-10 16:32:41,022 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 17:35:18] 2026-03-10 16:32:41,177 [wrapper] ==== pilot stdout END ====
[2026-03-10 17:35:18] 2026-03-10 16:32:41,179 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 17:35:18] 2026-03-10 16:32:41,181 [wrapper] pilotpid: 3353675
[2026-03-10 17:35:18] 2026-03-10 16:32:41,183 [wrapper] Pilot exit status: 0
[2026-03-10 17:35:18] 2026-03-10 16:32:41,190 [wrapper] pandaids: 7047266797 7047266797
[2026-03-10 17:35:18] 2026-03-10 16:32:41,307 [wrapper] cleanup supervisor_pilot 3657556 3353676
[2026-03-10 17:35:18] 2026-03-10 16:32:41,309 [wrapper] Test setup, not cleaning
[2026-03-10 17:35:18] 2026-03-10 16:32:41,311 [wrapper] apfmon messages muted
[2026-03-10 17:35:18] 2026-03-10 16:32:41,312 [wrapper] ==== wrapper stdout END ====
[2026-03-10 17:35:18] 2026-03-10 16:32:41,314 [wrapper] ==== wrapper stderr END ====
[2026-03-10 17:35:18]  *** Error codes and diagnostics ***
[2026-03-10 17:35:18]     "exeErrorCode": 0,
[2026-03-10 17:35:18]     "exeErrorDiag": "",
[2026-03-10 17:35:18]     "pilotErrorCode": 0,
[2026-03-10 17:35:18]     "pilotErrorDiag": "",
[2026-03-10 17:35:18]  *** Listing of results directory ***
[2026-03-10 17:35:18] total 712836
[2026-03-10 17:35:18] drwx------. 5 boinc boinc      4096 Feb  2 16:00 pilot3
[2026-03-10 17:35:18] -rw-r--r--. 1 boinc boinc    584627 Mar  9 13:35 pilot3.tar.gz
[2026-03-10 17:35:18] -rwx------. 1 boinc boinc     36322 Mar  9 13:36 runpilot2-wrapper.sh
[2026-03-10 17:35:18] -rw-r--r--. 1 boinc boinc      5111 Mar  9 13:36 queuedata.json
[2026-03-10 17:35:18] -rw-r--r--. 1 boinc boinc       100 Mar 10 15:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 17:35:18] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 15:12 run_atlas
[2026-03-10 17:35:18] -rw-r--r--. 1 boinc boinc       105 Mar 10 15:12 job.xml
[2026-03-10 17:35:18] -rw-r--r--. 3 boinc boinc 267380333 Mar 10 15:12 EVNT.48958633._000097.pool.root.1
[2026-03-10 17:35:18] -rw-r--r--. 3 boinc boinc 267380333 Mar 10 15:12 ATLAS.root_0
[2026-03-10 17:35:18] -rw-r--r--. 2 boinc boinc     15845 Mar 10 15:12 start_atlas.sh
[2026-03-10 17:35:18] drwxrwx--x. 2 boinc boinc      4096 Mar 10 15:12 shared
[2026-03-10 17:35:18] -rw-r--r--. 2 boinc boinc    597926 Mar 10 15:12 input.tar.gz
[2026-03-10 17:35:18] -rw-r--r--. 1 boinc boinc         0 Mar 10 15:12 boinc_lockfile
[2026-03-10 17:35:18] -rw-------. 1 boinc boinc   1511578 Mar 10 15:13 agis_ddmendpoints.agis.ALL.json
[2026-03-10 17:35:18] -rw-r--r--. 1 boinc boinc      2526 Mar 10 16:03 pandaJob.out
[2026-03-10 17:35:18] -rw-------. 1 boinc boinc   1006737 Mar 10 16:03 agis_schedconf.cvmfs.json
[2026-03-10 17:35:18] -rw-------. 1 boinc boinc       445 Mar 10 16:03 workernode_map.json
[2026-03-10 17:35:18] -rw-r--r--. 1 boinc boinc      6713 Mar 10 16:14 init_data.xml
[2026-03-10 17:35:18] -rw-------. 1 boinc boinc 189179082 Mar 10 17:31 HITS.48958635._002481.pool.root.1
[2026-03-10 17:35:18] -rw-r--r--. 1 boinc boinc       528 Mar 10 17:31 boinc_task_state.xml
[2026-03-10 17:35:18] -rw-------. 1 boinc boinc      1023 Mar 10 17:31 memory_monitor_summary.json
[2026-03-10 17:35:18] -rw-------. 1 boinc boinc    262478 Mar 10 17:31 log.48958635._002481.job.log.tgz.1
[2026-03-10 17:35:18] -rw-------. 1 boinc boinc      6343 Mar 10 17:31 heartbeat.json
[2026-03-10 17:35:18] -rw-------. 1 boinc boinc        97 Mar 10 17:32 pilot_heartbeat.json
[2026-03-10 17:35:18] -rw-------. 1 boinc boinc      5192 Mar 10 17:32 pilotlog.txt
[2026-03-10 17:35:18] -rw-------. 1 boinc boinc    768390 Mar 10 17:32 log.48958635._002481.job.log.1
[2026-03-10 17:35:18] -rw-------. 1 boinc boinc       357 Mar 10 17:32 output.list
[2026-03-10 17:35:18] -rw-r--r--. 1 boinc boinc       620 Mar 10 17:32 runtime_log
[2026-03-10 17:35:18] -rw-------. 1 boinc boinc   1044480 Mar 10 17:32 result.tar.gz
[2026-03-10 17:35:18] -rw-r--r--. 1 boinc boinc      9298 Mar 10 17:32 runtime_log.err
[2026-03-10 17:35:18] -rw-------. 1 boinc boinc       787 Mar 10 17:32 VqRMDmJ1oJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmTQcLDmhMOPxn.diag
[2026-03-10 17:35:18] -rw-r--r--. 1 boinc boinc        26 Mar 10 17:35 wrapper_checkpoint.txt
[2026-03-10 17:35:18] -rw-r--r--. 1 boinc boinc      8192 Mar 10 17:35 boinc_mmap_file
[2026-03-10 17:35:18] -rw-r--r--. 1 boinc boinc     23269 Mar 10 17:35 stderr.txt
[2026-03-10 17:35:18] HITS file was successfully produced:
[2026-03-10 17:35:18] -rw-------. 1 boinc boinc 189179082 Mar 10 17:31 shared/HITS.pool.root.1
[2026-03-10 17:35:18]  *** Contents of shared directory: ***
[2026-03-10 17:35:18] total 447492
[2026-03-10 17:35:18] -rw-r--r--. 3 boinc boinc 267380333 Mar 10 15:12 ATLAS.root_0
[2026-03-10 17:35:18] -rw-r--r--. 2 boinc boinc     15845 Mar 10 15:12 start_atlas.sh
[2026-03-10 17:35:18] -rw-r--r--. 2 boinc boinc    597926 Mar 10 15:12 input.tar.gz
[2026-03-10 17:35:18] -rw-------. 1 boinc boinc 189179082 Mar 10 17:31 HITS.pool.root.1
[2026-03-10 17:35:18] -rw-------. 1 boinc boinc   1044480 Mar 10 17:32 result.tar.gz
17:35:19 (3337916): run_atlas exited; CPU time 20450.099872
17:35:19 (3337916): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN