Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:37:27 (523303): wrapper (7.7.26015): starting
17:37:27 (523303): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 17:37:27] Arguments: --nthreads 4
[2026-03-09 17:37:27] Threads: 4
[2026-03-09 17:37:27] Checking for CVMFS
[2026-03-09 17:37:27] No cvmfs_config command found, will try listing directly
[2026-03-09 17:37:27] CVMFS is ok
[2026-03-09 17:37:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 17:37:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 17:37:27] Further information can be found at the LHC@home message board.
[2026-03-09 17:37:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 17:37:27] Checking for apptainer binary...
[2026-03-09 17:37:27] which: no apptainer in ((null))
[2026-03-09 17:37:27] apptainer is not installed, using version from CVMFS
[2026-03-09 17:37:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 17:37:27] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot24/slots/6/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-09 17:37:27] apptainer works
[2026-03-09 17:37:27] Set ATHENA_PROC_NUMBER=4
[2026-03-09 17:37:27] Set ATHENA_CORE_NUMBER=4
[2026-03-09 17:37:27] Starting ATLAS job with PandaID=7047245677
[2026-03-09 17:37:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot24/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 19:41:59]  *** The last 200 lines of the pilot log: ***
[2026-03-09 19:41:59] 2026-03-09 18:41:26,314 | INFO     | job 7047245677 has finished - writing final server update
[2026-03-09 19:41:59] 2026-03-09 18:41:26,314 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1336334/.job.ad'
[2026-03-09 19:41:59] 2026-03-09 18:41:26,314 | INFO     | total number of processed events: 400 (read)
[2026-03-09 19:41:59] 2026-03-09 18:41:26,332 | INFO     | using path: /var/lib/boinc/var/slot24/slots/6/PanDA_Pilot-7047245677/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 19:41:59] 2026-03-09 18:41:26,333 | INFO     | extracted standard info from prmon json
[2026-03-09 19:41:59] 2026-03-09 18:41:26,333 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 19:41:59] 2026-03-09 18:41:26,333 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 19:41:59] 2026-03-09 18:41:26,333 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 19:41:59] 2026-03-09 18:41:26,333 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 19:41:59] 2026-03-09 18:41:26,335 | INFO     | fitting pss+swap vs Time
[2026-03-09 19:41:59] 2026-03-09 18:41:26,335 | INFO     | sum of square deviations: 563026370.5
[2026-03-09 19:41:59] 2026-03-09 18:41:26,335 | INFO     | sum of deviations: 13055756281.500002
[2026-03-09 19:41:59] 2026-03-09 18:41:26,335 | INFO     | mean x: 1773077969.5
[2026-03-09 19:41:59] 2026-03-09 18:41:26,335 | INFO     | mean y: 2316262.7459016396
[2026-03-09 19:41:59] 2026-03-09 18:41:26,335 | INFO     | intersect: -41112762978.26967
[2026-03-09 19:41:59] 2026-03-09 18:41:26,335 | INFO     | chi2: 1.1100044605527597
[2026-03-09 19:41:59] 2026-03-09 18:41:26,335 | INFO     | sum of square deviations: 496597218.0
[2026-03-09 19:41:59] 2026-03-09 18:41:26,336 | INFO     | sum of deviations: 12674392669.000002
[2026-03-09 19:41:59] 2026-03-09 18:41:26,336 | INFO     | mean x: 1773077817.0
[2026-03-09 19:41:59] 2026-03-09 18:41:26,336 | INFO     | mean y: 2315369.9914529915
[2026-03-09 19:41:59] 2026-03-09 18:41:26,336 | INFO     | intersect: -45251028126.087746
[2026-03-09 19:41:59] 2026-03-09 18:41:26,336 | INFO     | chi2: 1.1103324659445182
[2026-03-09 19:41:59] 2026-03-09 18:41:26,336 | INFO     | current chi2=1.1103324659445182 (change=-0.029549916546744243 %)
[2026-03-09 19:41:59] 2026-03-09 18:41:26,336 | INFO     | right removable region: 116
[2026-03-09 19:41:59] 2026-03-09 18:41:26,336 | INFO     | sum of square deviations: 496597218.0
[2026-03-09 19:41:59] 2026-03-09 18:41:26,336 | INFO     | sum of deviations: 1113098964.0000002
[2026-03-09 19:41:59] 2026-03-09 18:41:26,336 | INFO     | mean x: 1773078122.0
[2026-03-09 19:41:59] 2026-03-09 18:41:26,337 | INFO     | mean y: 2342969.6153846155
[2026-03-09 19:41:59] 2026-03-09 18:41:26,337 | INFO     | intersect: -3971927020.534391
[2026-03-09 19:41:59] 2026-03-09 18:41:26,337 | INFO     | chi2: 0.0011178539901747617
[2026-03-09 19:41:59] 2026-03-09 18:41:26,337 | INFO     | current chi2=0.0011178539901747617 (change=99.89929283801092 %)
[2026-03-09 19:41:59] 2026-03-09 18:41:26,337 | INFO     | sum of square deviations: 435610028.0
[2026-03-09 19:41:59] 2026-03-09 18:41:26,337 | INFO     | sum of deviations: 699860197.9999999
[2026-03-09 19:41:59] 2026-03-09 18:41:26,337 | INFO     | mean x: 1773078274.5
[2026-03-09 19:41:59] 2026-03-09 18:41:26,337 | INFO     | mean y: 2343997.839285714
[2026-03-09 19:41:59] 2026-03-09 18:41:26,337 | INFO     | intersect: -2846320707.972005
[2026-03-09 19:41:59] 2026-03-09 18:41:26,337 | INFO     | chi2: 0.0008329742225904907
[2026-03-09 19:41:59] 2026-03-09 18:41:26,337 | INFO     | current chi2=0.0008329742225904907 (change=25.484523926039195 %)
[2026-03-09 19:41:59] 2026-03-09 18:41:26,337 | INFO     | sum of square deviations: 379832238.0
[2026-03-09 19:41:59] 2026-03-09 18:41:26,338 | INFO     | sum of deviations: 490004215.9999999
[2026-03-09 19:41:59] 2026-03-09 18:41:26,338 | INFO     | mean x: 1773078427.0
[2026-03-09 19:41:59] 2026-03-09 18:41:26,338 | INFO     | mean y: 2344569.925233645
[2026-03-09 19:41:59] 2026-03-09 18:41:26,338 | INFO     | intersect: -2285022898.15326
[2026-03-09 19:41:59] 2026-03-09 18:41:26,338 | INFO     | chi2: 0.0007760159345403763
[2026-03-09 19:41:59] 2026-03-09 18:41:26,338 | INFO     | current chi2=0.0007760159345403763 (change=6.837941259812122 %)
[2026-03-09 19:41:59] 2026-03-09 18:41:26,338 | INFO     | left removable region: 30
[2026-03-09 19:41:59] 2026-03-09 18:41:26,338 | INFO     | sum of square deviations: 197203697.5
[2026-03-09 19:41:59] 2026-03-09 18:41:26,338 | INFO     | sum of deviations: 224050346.50000003
[2026-03-09 19:41:59] 2026-03-09 18:41:26,338 | INFO     | mean x: 1773078701.5
[2026-03-09 19:41:59] 2026-03-09 18:41:26,338 | INFO     | mean y: 2346303.197674419
[2026-03-09 19:41:59] 2026-03-09 18:41:26,338 | INFO     | intersect: -2012113377.2190433
[2026-03-09 19:41:59] 2026-03-09 18:41:26,338 | INFO     | chi2: 2.4270089167008287e-05
[2026-03-09 19:41:59] 2026-03-09 18:41:26,338 | INFO     | current memory leak: 1.14 B/s (using 86 data points, chi2=0.00)
[2026-03-09 19:41:59] 2026-03-09 18:41:26,339 | INFO     | could have reported an average CPU frequency of 3591 MHz (8 samples)
[2026-03-09 19:41:59] 2026-03-09 18:41:26,339 | INFO     | ..............................
[2026-03-09 19:41:59] 2026-03-09 18:41:26,339 | INFO     | . Timing measurements:
[2026-03-09 19:41:59] 2026-03-09 18:41:26,339 | INFO     | . get job = 0 s
[2026-03-09 19:41:59] 2026-03-09 18:41:26,339 | INFO     | . initial setup = 4 s
[2026-03-09 19:41:59] 2026-03-09 18:41:26,339 | INFO     | . payload setup = 4 s
[2026-03-09 19:41:59] 2026-03-09 18:41:26,339 | INFO     | . stage-in = 0 s
[2026-03-09 19:41:59] 2026-03-09 18:41:26,339 | INFO     | . payload execution = 7405 s
[2026-03-09 19:41:59] 2026-03-09 18:41:26,339 | INFO     | . stage-out = 0 s
[2026-03-09 19:41:59] 2026-03-09 18:41:26,339 | INFO     | . log creation = 0 s
[2026-03-09 19:41:59] 2026-03-09 18:41:26,339 | INFO     | ..............................
[2026-03-09 19:41:59] 2026-03-09 18:41:26,382 | INFO     | 
[2026-03-09 19:41:59] 2026-03-09 18:41:26,383 | INFO     | job summary report
[2026-03-09 19:41:59] 2026-03-09 18:41:26,383 | INFO     | --------------------------------------------------
[2026-03-09 19:41:59] 2026-03-09 18:41:26,383 | INFO     | PanDA job id: 7047245677
[2026-03-09 19:41:59] 2026-03-09 18:41:26,383 | INFO     | task id: 48929306
[2026-03-09 19:41:59] 2026-03-09 18:41:26,383 | INFO     | errors: (none)
[2026-03-09 19:41:59] 2026-03-09 18:41:26,383 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 19:41:59] 2026-03-09 18:41:26,383 | INFO     | pilot state: finished 
[2026-03-09 19:41:59] 2026-03-09 18:41:26,383 | INFO     | transexitcode: 0
[2026-03-09 19:41:59] 2026-03-09 18:41:26,383 | INFO     | exeerrorcode: 0
[2026-03-09 19:41:59] 2026-03-09 18:41:26,383 | INFO     | exeerrordiag: 
[2026-03-09 19:41:59] 2026-03-09 18:41:26,383 | INFO     | exitcode: 0
[2026-03-09 19:41:59] 2026-03-09 18:41:26,383 | INFO     | exitmsg: OK
[2026-03-09 19:41:59] 2026-03-09 18:41:26,383 | INFO     | cpuconsumptiontime: 28544 s
[2026-03-09 19:41:59] 2026-03-09 18:41:26,383 | INFO     | nevents: 400
[2026-03-09 19:41:59] 2026-03-09 18:41:26,383 | INFO     | neventsw: 0
[2026-03-09 19:41:59] 2026-03-09 18:41:26,383 | INFO     | pid: 534585
[2026-03-09 19:41:59] 2026-03-09 18:41:26,383 | INFO     | pgrp: 534585
[2026-03-09 19:41:59] 2026-03-09 18:41:26,383 | INFO     | corecount: 4
[2026-03-09 19:41:59] 2026-03-09 18:41:26,383 | INFO     | event service: False
[2026-03-09 19:41:59] 2026-03-09 18:41:26,383 | INFO     | sizes: {0: 2280229, 11: 2280229, 7413: 2316653, 7415: 2316653, 7416: 2316847}
[2026-03-09 19:41:59] 2026-03-09 18:41:26,383 | INFO     | --------------------------------------------------
[2026-03-09 19:41:59] 2026-03-09 18:41:26,383 | INFO     | 
[2026-03-09 19:41:59] 2026-03-09 18:41:26,383 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot24/slots/6
[2026-03-09 19:41:59] 2026-03-09 18:41:26,403 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 19:41:59] 2026-03-09 18:41:26,403 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 19:41:59] 2026-03-09 18:41:26,403 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 19:41:59] 2026-03-09 18:41:26,403 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 19:41:59] 2026-03-09 18:41:26,403 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 19:41:59] 2026-03-09 18:41:26,403 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 19:41:59] 2026-03-09 18:41:26,403 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 19:41:59] 2026-03-09 18:41:26,403 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 19:41:59] 2026-03-09 18:41:26,403 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 19:41:59] 2026-03-09 18:41:26,403 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 19:41:59] 2026-03-09 18:41:26,403 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 19:41:59] 2026-03-09 18:41:26,406 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 19:41:59] 2026-03-09 18:41:26,406 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 19:41:59] 2026-03-09 18:41:26,406 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 19:41:59] 2026-03-09 18:41:26,406 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 19:41:59] 2026-03-09 18:41:26,406 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 19:41:59] 2026-03-09 18:41:26,406 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 19:41:59] 2026-03-09 18:41:26,407 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 19:41:59] 2026-03-09 18:41:26,407 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 19:41:59] 2026-03-09 18:41:26,407 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 19:41:59] 2026-03-09 18:41:26,407 | INFO     | job 7047245677 has completed (purged errors)
[2026-03-09 19:41:59] 2026-03-09 18:41:26,407 | INFO     | overall cleanup function is called
[2026-03-09 19:41:59] 2026-03-09 18:41:27,414 | INFO     | --- collectZombieJob: --- 10, [534585]
[2026-03-09 19:41:59] 2026-03-09 18:41:27,414 | INFO     | zombie collector waiting for pid 534585
[2026-03-09 19:41:59] 2026-03-09 18:41:27,414 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 19:41:59] 2026-03-09 18:41:27,414 | INFO     | collected zombie processes
[2026-03-09 19:41:59] 2026-03-09 18:41:27,414 | INFO     | will attempt to kill all subprocesses of pid=534585
[2026-03-09 19:41:59] 2026-03-09 18:41:27,849 | INFO     | process IDs to be killed: [534585] (in reverse order)
[2026-03-09 19:41:59] 2026-03-09 18:41:28,070 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 19:41:59] 2026-03-09 18:41:28,071 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 19:41:59] 2026-03-09 18:41:28,096 | INFO     | did not find any defunct processes belonging to 534585
[2026-03-09 19:41:59] 2026-03-09 18:41:28,121 | INFO     | did not find any defunct processes belonging to 534585
[2026-03-09 19:41:59] 2026-03-09 18:41:28,122 | INFO     | ready for new job
[2026-03-09 19:41:59] 2026-03-09 18:41:28,122 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 19:41:59] 2026-03-09 18:41:28,123 | INFO     | **************************************
[2026-03-09 19:41:59] 2026-03-09 18:41:28,123 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 19:41:59] 2026-03-09 18:41:28,123 | INFO     | **************************************
[2026-03-09 19:41:59] 2026-03-09 18:41:28,123 | INFO     | 
[2026-03-09 19:41:59] 2026-03-09 18:41:28,129 | INFO     | architecture information:
[2026-03-09 19:41:59] 2026-03-09 18:41:28,129 | INFO     | executing command: cat /etc/os-release
[2026-03-09 19:41:59] 2026-03-09 18:41:28,139 | INFO     | cat /etc/os-release:
[2026-03-09 19:41:59] NAME="CentOS Linux"
[2026-03-09 19:41:59] VERSION="7 (Core)"
[2026-03-09 19:41:59] ID="centos"
[2026-03-09 19:41:59] ID_LIKE="rhel fedora"
[2026-03-09 19:41:59] VERSION_ID="7"
[2026-03-09 19:41:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 19:41:59] ANSI_COLOR="0;31"
[2026-03-09 19:41:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 19:41:59] HOME_URL="https://www.centos.org/"
[2026-03-09 19:41:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 19:41:59] 
[2026-03-09 19:41:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 19:41:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 19:41:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 19:41:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 19:41:59] 
[2026-03-09 19:41:59] 2026-03-09 18:41:28,139 | INFO     | **************************************
[2026-03-09 19:41:59] 2026-03-09 18:41:28,642 | INFO     | executing command: df -mP /var/lib/boinc/var/slot24/slots/6
[2026-03-09 19:41:59] 2026-03-09 18:41:28,653 | INFO     | sufficient remaining disk space (28128051200 B)
[2026-03-09 19:41:59] 2026-03-09 18:41:28,653 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 19:41:59] 2026-03-09 18:41:28,654 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 19:41:59] 2026-03-09 18:41:28,654 | INFO     | update_server=False
[2026-03-09 19:41:59] 2026-03-09 18:41:28,654 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 19:41:59] 2026-03-09 18:41:28,654 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 19:41:59] 2026-03-09 18:41:28,654 | INFO     | aborting loop
[2026-03-09 19:41:59] 2026-03-09 18:41:29,122 | INFO     | all job control threads have been joined
[2026-03-09 19:41:59] 2026-03-09 18:41:29,261 | INFO     | all payload control threads have been joined
[2026-03-09 19:41:59] 2026-03-09 18:41:29,265 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 19:41:59] 2026-03-09 18:41:29,529 | INFO     | all data control threads have been joined
[2026-03-09 19:41:59] 2026-03-09 18:41:29,659 | INFO     | [job] retrieve thread has finished
[2026-03-09 19:41:59] 2026-03-09 18:41:29,659 | INFO     | [job] job monitor thread has finished
[2026-03-09 19:41:59] 2026-03-09 18:41:30,128 | INFO     | [job] control thread has finished
[2026-03-09 19:41:59] 2026-03-09 18:41:30,199 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 19:41:59] 2026-03-09 18:41:30,266 | INFO     | [payload] control thread has finished
[2026-03-09 19:41:59] 2026-03-09 18:41:30,377 | INFO     | [job] validate thread has finished
[2026-03-09 19:41:59] 2026-03-09 18:41:30,387 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 19:41:59] 2026-03-09 18:41:30,534 | INFO     | [data] control thread has finished
[2026-03-09 19:41:59] 2026-03-09 18:41:30,642 | INFO     | [payload] validate_post thread has finished
[2026-03-09 19:41:59] 2026-03-09 18:41:30,701 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 19:41:59] 2026-03-09 18:41:30,740 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 19:41:59] 2026-03-09 18:41:30,773 | INFO     | [data] copytool_in thread has finished
[2026-03-09 19:41:59] 2026-03-09 18:41:30,806 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 19:41:59] 2026-03-09 18:41:30,844 | INFO     | [payload] failed_post thread has finished
[2026-03-09 19:41:59] 2026-03-09 18:41:31,270 | INFO     | [data] copytool_out thread has finished
[2026-03-09 19:41:59] 2026-03-09 18:41:31,396 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 19:41:59] 2026-03-09 18:41:32,408 | INFO     | [job] queue monitor thread has finished
[2026-03-09 19:41:59] 2026-03-09 18:41:34,810 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 19:41:59] 2026-03-09 18:41:51,188 | INFO     | [monitor] cgroup control has ended
[2026-03-09 19:41:59] 2026-03-09 18:41:53,168 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23034795632448)>', '<ExcThread(monitor, started 23034552653568)>']
[2026-03-09 19:41:59] 2026-03-09 18:41:58,193 | INFO     | all workflow threads have been joined
[2026-03-09 19:41:59] 2026-03-09 18:41:58,194 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 19:41:59] 2026-03-09 18:41:58,194 | INFO     | traces error code: 0
[2026-03-09 19:41:59] 2026-03-09 18:41:58,194 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 19:41:59] 2026-03-09 18:41:59,097 | INFO     | PID=527830 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-09 19:41:59] 2026-03-09 18:41:59,097 | INFO     | .. there are 59 such processes running
[2026-03-09 19:41:59] 2026-03-09 18:41:59,097 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 19:41:59] 2026-03-09 18:41:59,098 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 19:41:59] 2026-03-09 18:41:59,098 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 19:41:59] 2026-03-09 18:41:59,098 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 19:41:59] 2026-03-09 18:41:59,098 | CRITICAL | thread 'MainThread' is not alive
[2026-03-09 19:41:59] 2026-03-09 18:41:59,098 | INFO     | [monitor] control thread has ended
[2026-03-09 19:41:59] 2026-03-09 18:41:59,214 [wrapper] ==== pilot stdout END ====
[2026-03-09 19:41:59] 2026-03-09 18:41:59,216 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 19:41:59] 2026-03-09 18:41:59,219 [wrapper] pilotpid: 527830
[2026-03-09 19:41:59] 2026-03-09 18:41:59,220 [wrapper] Pilot exit status: 0
[2026-03-09 19:41:59] 2026-03-09 18:41:59,228 [wrapper] pandaids: 7047245677
[2026-03-09 19:41:59] 2026-03-09 18:41:59,343 [wrapper] cleanup supervisor_pilot 1892409 527831
[2026-03-09 19:41:59] 2026-03-09 18:41:59,346 [wrapper] Test setup, not cleaning
[2026-03-09 19:41:59] 2026-03-09 18:41:59,348 [wrapper] apfmon messages muted
[2026-03-09 19:41:59] 2026-03-09 18:41:59,349 [wrapper] ==== wrapper stdout END ====
[2026-03-09 19:41:59] 2026-03-09 18:41:59,351 [wrapper] ==== wrapper stderr END ====
[2026-03-09 19:41:59]  *** Error codes and diagnostics ***
[2026-03-09 19:41:59]     "exeErrorCode": 0,
[2026-03-09 19:41:59]     "exeErrorDiag": "",
[2026-03-09 19:41:59]     "pilotErrorCode": 0,
[2026-03-09 19:41:59]     "pilotErrorDiag": "",
[2026-03-09 19:41:59]  *** Listing of results directory ***
[2026-03-09 19:41:59] total 461184
[2026-03-09 19:41:59] -rw-r--r--. 1 boinc boinc      5111 Mar  9 13:35 queuedata.json
[2026-03-09 19:41:59] -rw-r--r--. 1 boinc boinc    584627 Mar  9 13:35 pilot3.tar.gz
[2026-03-09 19:41:59] -rwx------. 1 boinc boinc     36322 Mar  9 13:35 runpilot2-wrapper.sh
[2026-03-09 19:41:59] -rw-r--r--. 1 boinc boinc       100 Mar  9 17:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 19:41:59] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 17:37 run_atlas
[2026-03-09 19:41:59] -rw-r--r--. 1 boinc boinc       105 Mar  9 17:37 job.xml
[2026-03-09 19:41:59] -rw-r--r--. 2 boinc boinc     15845 Mar  9 17:37 start_atlas.sh
[2026-03-09 19:41:59] drwxrwx--x. 2 boinc boinc      4096 Mar  9 17:37 shared
[2026-03-09 19:41:59] -rw-r--r--. 2 boinc boinc    597933 Mar  9 17:37 input.tar.gz
[2026-03-09 19:41:59] -rw-r--r--. 1 boinc boinc      6701 Mar  9 17:37 init_data.xml
[2026-03-09 19:41:59] -rw-r--r--. 2 boinc boinc 280436898 Mar  9 17:37 EVNT.48929301._000002.pool.root.1
[2026-03-09 19:41:59] -rw-r--r--. 1 boinc boinc         0 Mar  9 17:37 boinc_lockfile
[2026-03-09 19:41:59] -rw-r--r--. 1 boinc boinc      2555 Mar  9 17:37 pandaJob.out
[2026-03-09 19:41:59] -rw-------. 1 boinc boinc   1002608 Mar  9 17:37 agis_schedconf.cvmfs.json
[2026-03-09 19:41:59] -rw-------. 1 boinc boinc   1511578 Mar  9 17:37 agis_ddmendpoints.agis.ALL.json
[2026-03-09 19:41:59] -rw-------. 1 boinc boinc       441 Mar  9 17:37 workernode_map.json
[2026-03-09 19:41:59] drwx------. 5 boinc boinc      4096 Mar  9 17:37 pilot3
[2026-03-09 19:41:59] -rw-------. 1 boinc boinc 185134734 Mar  9 19:40 HITS.48929306._000042.pool.root.1
[2026-03-09 19:41:59] -rw-r--r--. 1 boinc boinc       529 Mar  9 19:41 boinc_task_state.xml
[2026-03-09 19:41:59] -rw-------. 1 boinc boinc      1030 Mar  9 19:41 memory_monitor_summary.json
[2026-03-09 19:41:59] -rw-------. 1 boinc boinc        95 Mar  9 19:41 pilot_heartbeat.json
[2026-03-09 19:41:59] -rw-------. 1 boinc boinc    313421 Mar  9 19:41 log.48929306._000042.job.log.tgz.1
[2026-03-09 19:41:59] -rw-------. 1 boinc boinc      6342 Mar  9 19:41 heartbeat.json
[2026-03-09 19:41:59] -rw-r--r--. 1 boinc boinc        27 Mar  9 19:41 wrapper_checkpoint.txt
[2026-03-09 19:41:59] -rw-r--r--. 1 boinc boinc      8192 Mar  9 19:41 boinc_mmap_file
[2026-03-09 19:41:59] -rw-------. 1 boinc boinc       892 Mar  9 19:41 pilotlog.txt
[2026-03-09 19:41:59] -rw-------. 1 boinc boinc   1064232 Mar  9 19:41 log.48929306._000042.job.log.1
[2026-03-09 19:41:59] -rw-------. 1 boinc boinc       357 Mar  9 19:41 output.list
[2026-03-09 19:41:59] -rw-r--r--. 1 boinc boinc       620 Mar  9 19:41 runtime_log
[2026-03-09 19:41:59] -rw-------. 1 boinc boinc   1392640 Mar  9 19:41 result.tar.gz
[2026-03-09 19:41:59] -rw-r--r--. 1 boinc boinc      9204 Mar  9 19:41 runtime_log.err
[2026-03-09 19:41:59] -rw-------. 1 boinc boinc       663 Mar  9 19:41 qHMLDm90oJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDm1jZLDmwPnPsm.diag
[2026-03-09 19:41:59] -rw-r--r--. 1 boinc boinc     20874 Mar  9 19:41 stderr.txt
[2026-03-09 19:41:59] HITS file was successfully produced:
[2026-03-09 19:41:59] -rw-------. 1 boinc boinc 185134734 Mar  9 19:40 shared/HITS.pool.root.1
[2026-03-09 19:41:59]  *** Contents of shared directory: ***
[2026-03-09 19:41:59] total 456632
[2026-03-09 19:41:59] -rw-r--r--. 2 boinc boinc     15845 Mar  9 17:37 start_atlas.sh
[2026-03-09 19:41:59] -rw-r--r--. 2 boinc boinc    597933 Mar  9 17:37 input.tar.gz
[2026-03-09 19:41:59] -rw-r--r--. 2 boinc boinc 280436898 Mar  9 17:37 ATLAS.root_0
[2026-03-09 19:41:59] -rw-------. 1 boinc boinc 185134734 Mar  9 19:40 HITS.pool.root.1
[2026-03-09 19:41:59] -rw-------. 1 boinc boinc   1392640 Mar  9 19:41 result.tar.gz
19:42:01 (523303): run_atlas exited; CPU time 28867.583554
19:42:01 (523303): called boinc_finish(0)

</stderr_txt>
]]>

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