Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:53:36 (2530832): wrapper (7.7.26015): starting
14:53:36 (2530832): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 14:53:36] Arguments: --nthreads 4
[2026-03-09 14:53:36] Threads: 4
[2026-03-09 14:53:36] Checking for CVMFS
[2026-03-09 14:53:36] No cvmfs_config command found, will try listing directly
[2026-03-09 14:53:36] CVMFS is ok
[2026-03-09 14:53:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 14:53:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 14:53:36] Further information can be found at the LHC@home message board.
[2026-03-09 14:53:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 14:53:36] Checking for apptainer binary...
[2026-03-09 14:53:36] which: no apptainer in ((null))
[2026-03-09 14:53:36] apptainer is not installed, using version from CVMFS
[2026-03-09 14:53:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 14:53:36] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot20/slots/7/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-03-09 14:53:36] apptainer works
[2026-03-09 14:53:36] Set ATHENA_PROC_NUMBER=4
[2026-03-09 14:53:36] Set ATHENA_CORE_NUMBER=4
[2026-03-09 14:53:36] Starting ATLAS job with PandaID=7047073501
[2026-03-09 14:53:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot20/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
16:23:29 (3548682): wrapper (7.7.26015): starting
16:23:29 (3548682): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 16:23:29] Arguments: --nthreads 4
[2026-03-09 16:23:29] Threads: 4
[2026-03-09 16:23:29] This job has been restarted, cleaning up previous attempt
[2026-03-09 16:23:29] Checking for CVMFS
[2026-03-09 16:23:29] No cvmfs_config command found, will try listing directly
[2026-03-09 16:23:29] CVMFS is ok
[2026-03-09 16:23:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 16:23:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 16:23:29] Further information can be found at the LHC@home message board.
[2026-03-09 16:23:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 16:23:29] Checking for apptainer binary...
[2026-03-09 16:23:29] which: no apptainer in ((null))
[2026-03-09 16:23:29] apptainer is not installed, using version from CVMFS
[2026-03-09 16:23:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 16:23:29] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot20/slots/7/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-03-09 16:23:29] apptainer works
[2026-03-09 16:23:29] Set ATHENA_PROC_NUMBER=4
[2026-03-09 16:23:29] Set ATHENA_CORE_NUMBER=4
[2026-03-09 16:23:29] Starting ATLAS job with PandaID=7047073501
[2026-03-09 16:23:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot20/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 18:08:52]  *** The last 200 lines of the pilot log: ***
[2026-03-09 18:08:52] 2026-03-09 17:08:11,797 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 18:08:52] 2026-03-09 17:08:11,799 | INFO     | fitting pss+swap vs Time
[2026-03-09 18:08:52] 2026-03-09 17:08:11,799 | INFO     | sum of square deviations: 338804492.0
[2026-03-09 18:08:52] 2026-03-09 17:08:11,799 | INFO     | sum of deviations: 9967777224.000002
[2026-03-09 18:08:52] 2026-03-09 17:08:11,799 | INFO     | mean x: 1773072948.0
[2026-03-09 18:08:52] 2026-03-09 17:08:11,799 | INFO     | mean y: 2315778.2427184465
[2026-03-09 18:08:52] 2026-03-09 17:08:11,799 | INFO     | intersect: -52162270479.85488
[2026-03-09 18:08:52] 2026-03-09 17:08:11,799 | INFO     | chi2: 1.1180592182230171
[2026-03-09 18:08:52] 2026-03-09 17:08:11,800 | INFO     | sum of square deviations: 291817564.5
[2026-03-09 18:08:52] 2026-03-09 17:08:11,800 | INFO     | sum of deviations: 9489197972.5
[2026-03-09 18:08:52] 2026-03-09 17:08:11,800 | INFO     | mean x: 1773072795.5
[2026-03-09 18:08:52] 2026-03-09 17:08:11,800 | INFO     | mean y: 2314223.7448979593
[2026-03-09 18:08:52] 2026-03-09 17:08:11,800 | INFO     | intersect: -57653703860.64121
[2026-03-09 18:08:52] 2026-03-09 17:08:11,800 | INFO     | chi2: 1.1198786443347997
[2026-03-09 18:08:52] 2026-03-09 17:08:11,800 | INFO     | current chi2=1.1198786443347997 (change=-0.1627307464692468 %)
[2026-03-09 18:08:52] 2026-03-09 17:08:11,800 | INFO     | right removable region: 97
[2026-03-09 18:08:52] 2026-03-09 17:08:11,800 | INFO     | sum of square deviations: 291817564.5
[2026-03-09 18:08:52] 2026-03-09 17:08:11,800 | INFO     | sum of deviations: -353178318.5
[2026-03-09 18:08:52] 2026-03-09 17:08:11,800 | INFO     | mean x: 1773073100.5
[2026-03-09 18:08:52] 2026-03-09 17:08:11,800 | INFO     | mean y: 2348299.2959183673
[2026-03-09 18:08:52] 2026-03-09 17:08:11,801 | INFO     | intersect: 2148247149.7819095
[2026-03-09 18:08:52] 2026-03-09 17:08:11,801 | INFO     | chi2: 0.000687615316654772
[2026-03-09 18:08:52] 2026-03-09 17:08:11,801 | INFO     | current chi2=0.000687615316654772 (change=99.93849920420604 %)
[2026-03-09 18:08:52] 2026-03-09 17:08:11,801 | INFO     | sum of square deviations: 249388862.0
[2026-03-09 18:08:52] 2026-03-09 17:08:11,801 | INFO     | sum of deviations: -560795753.0000001
[2026-03-09 18:08:52] 2026-03-09 17:08:11,801 | INFO     | mean x: 1773073253.0
[2026-03-09 18:08:52] 2026-03-09 17:08:11,801 | INFO     | mean y: 2349034.634408602
[2026-03-09 18:08:52] 2026-03-09 17:08:11,801 | INFO     | intersect: 3989423445.5208683
[2026-03-09 18:08:52] 2026-03-09 17:08:11,801 | INFO     | chi2: 0.0003020238803268153
[2026-03-09 18:08:52] 2026-03-09 17:08:11,801 | INFO     | current chi2=0.0003020238803268153 (change=56.076621184625076 %)
[2026-03-09 18:08:52] 2026-03-09 17:08:11,801 | INFO     | sum of square deviations: 211285822.0
[2026-03-09 18:08:52] 2026-03-09 17:08:11,801 | INFO     | sum of deviations: -563698956.5000001
[2026-03-09 18:08:52] 2026-03-09 17:08:11,801 | INFO     | mean x: 1773073405.5
[2026-03-09 18:08:52] 2026-03-09 17:08:11,802 | INFO     | mean y: 2349033.647727273
[2026-03-09 18:08:52] 2026-03-09 17:08:11,802 | INFO     | intersect: 4732811395.0940695
[2026-03-09 18:08:52] 2026-03-09 17:08:11,802 | INFO     | chi2: 0.00020832996375366584
[2026-03-09 18:08:52] 2026-03-09 17:08:11,802 | INFO     | current chi2=0.00020832996375366584 (change=31.022022653230184 %)
[2026-03-09 18:08:52] 2026-03-09 17:08:11,802 | INFO     | sum of square deviations: 177275882.0
[2026-03-09 18:08:52] 2026-03-09 17:08:11,802 | INFO     | sum of deviations: -428642668.9999999
[2026-03-09 18:08:52] 2026-03-09 17:08:11,802 | INFO     | mean x: 1773073558.0
[2026-03-09 18:08:52] 2026-03-09 17:08:11,802 | INFO     | mean y: 2348428.301204819
[2026-03-09 18:08:52] 2026-03-09 17:08:11,802 | INFO     | intersect: 4289536136.2966223
[2026-03-09 18:08:52] 2026-03-09 17:08:11,802 | INFO     | chi2: 0.00019557856739537224
[2026-03-09 18:08:52] 2026-03-09 17:08:11,802 | INFO     | current chi2=0.00019557856739537224 (change=6.120769249195063 %)
[2026-03-09 18:08:52] 2026-03-09 17:08:11,802 | INFO     | left removable region: 40
[2026-03-09 18:08:52] 2026-03-09 17:08:11,802 | INFO     | sum of square deviations: 57407588.0
[2026-03-09 18:08:52] 2026-03-09 17:08:11,802 | INFO     | sum of deviations: -50805740.99999997
[2026-03-09 18:08:52] 2026-03-09 17:08:11,802 | INFO     | mean x: 1773073985.0
[2026-03-09 18:08:52] 2026-03-09 17:08:11,802 | INFO     | mean y: 2346129.403508772
[2026-03-09 18:08:52] 2026-03-09 17:08:11,802 | INFO     | intersect: 1571517397.42034
[2026-03-09 18:08:52] 2026-03-09 17:08:11,803 | INFO     | chi2: 0.00011153676010942967
[2026-03-09 18:08:52] 2026-03-09 17:08:11,803 | INFO     | current memory leak: -0.89 B/s (using 57 data points, chi2=0.00)
[2026-03-09 18:08:52] 2026-03-09 17:08:11,803 | INFO     | could have reported an average CPU frequency of 3593 MHz (7 samples)
[2026-03-09 18:08:52] 2026-03-09 17:08:11,803 | INFO     | ..............................
[2026-03-09 18:08:52] 2026-03-09 17:08:11,803 | INFO     | . Timing measurements:
[2026-03-09 18:08:52] 2026-03-09 17:08:11,803 | INFO     | . get job = 0 s
[2026-03-09 18:08:52] 2026-03-09 17:08:11,803 | INFO     | . initial setup = 0 s
[2026-03-09 18:08:52] 2026-03-09 17:08:11,803 | INFO     | . payload setup = 4 s
[2026-03-09 18:08:52] 2026-03-09 17:08:11,803 | INFO     | . stage-in = 0 s
[2026-03-09 18:08:52] 2026-03-09 17:08:11,803 | INFO     | . payload execution = 6251 s
[2026-03-09 18:08:52] 2026-03-09 17:08:11,803 | INFO     | . stage-out = 0 s
[2026-03-09 18:08:52] 2026-03-09 17:08:11,803 | INFO     | . log creation = 0 s
[2026-03-09 18:08:52] 2026-03-09 17:08:11,803 | INFO     | ..............................
[2026-03-09 18:08:52] 2026-03-09 17:08:11,851 | INFO     | 
[2026-03-09 18:08:52] 2026-03-09 17:08:11,852 | INFO     | job summary report
[2026-03-09 18:08:52] 2026-03-09 17:08:11,852 | INFO     | --------------------------------------------------
[2026-03-09 18:08:52] 2026-03-09 17:08:11,852 | INFO     | PanDA job id: 7047073501
[2026-03-09 18:08:52] 2026-03-09 17:08:11,852 | INFO     | task id: 48998022
[2026-03-09 18:08:52] 2026-03-09 17:08:11,852 | INFO     | errors: (none)
[2026-03-09 18:08:52] 2026-03-09 17:08:11,852 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 18:08:52] 2026-03-09 17:08:11,852 | INFO     | pilot state: finished 
[2026-03-09 18:08:52] 2026-03-09 17:08:11,852 | INFO     | transexitcode: 0
[2026-03-09 18:08:52] 2026-03-09 17:08:11,852 | INFO     | exeerrorcode: 0
[2026-03-09 18:08:52] 2026-03-09 17:08:11,852 | INFO     | exeerrordiag: 
[2026-03-09 18:08:52] 2026-03-09 17:08:11,852 | INFO     | exitcode: 0
[2026-03-09 18:08:52] 2026-03-09 17:08:11,852 | INFO     | exitmsg: OK
[2026-03-09 18:08:52] 2026-03-09 17:08:11,852 | INFO     | cpuconsumptiontime: 23917 s
[2026-03-09 18:08:52] 2026-03-09 17:08:11,852 | INFO     | nevents: 400
[2026-03-09 18:08:52] 2026-03-09 17:08:11,852 | INFO     | neventsw: 0
[2026-03-09 18:08:52] 2026-03-09 17:08:11,852 | INFO     | pid: 3563540
[2026-03-09 18:08:52] 2026-03-09 17:08:11,852 | INFO     | pgrp: 3563540
[2026-03-09 18:08:52] 2026-03-09 17:08:11,852 | INFO     | corecount: 4
[2026-03-09 18:08:52] 2026-03-09 17:08:11,852 | INFO     | event service: False
[2026-03-09 18:08:52] 2026-03-09 17:08:11,852 | INFO     | sizes: {0: 2280288, 10: 2280288, 6260: 2307149, 6262: 2316169, 6264: 2316225, 6265: 2316419}
[2026-03-09 18:08:52] 2026-03-09 17:08:11,852 | INFO     | --------------------------------------------------
[2026-03-09 18:08:52] 2026-03-09 17:08:11,852 | INFO     | 
[2026-03-09 18:08:52] 2026-03-09 17:08:11,852 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot20/slots/7
[2026-03-09 18:08:52] 2026-03-09 17:08:11,869 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 18:08:52] 2026-03-09 17:08:11,869 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 18:08:52] 2026-03-09 17:08:11,869 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 18:08:52] 2026-03-09 17:08:11,869 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 18:08:52] 2026-03-09 17:08:11,869 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 18:08:52] 2026-03-09 17:08:11,869 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 18:08:52] 2026-03-09 17:08:11,869 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 18:08:52] 2026-03-09 17:08:11,869 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 18:08:52] 2026-03-09 17:08:11,869 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 18:08:52] 2026-03-09 17:08:11,869 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 18:08:52] 2026-03-09 17:08:11,869 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 18:08:52] 2026-03-09 17:08:11,870 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 18:08:52] 2026-03-09 17:08:11,870 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 18:08:52] 2026-03-09 17:08:11,870 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 18:08:52] 2026-03-09 17:08:11,870 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 18:08:52] 2026-03-09 17:08:11,870 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 18:08:52] 2026-03-09 17:08:11,870 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 18:08:52] 2026-03-09 17:08:11,870 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 18:08:52] 2026-03-09 17:08:11,870 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 18:08:52] 2026-03-09 17:08:11,870 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 18:08:52] 2026-03-09 17:08:11,870 | INFO     | job 7047073501 has completed (purged errors)
[2026-03-09 18:08:52] 2026-03-09 17:08:11,870 | INFO     | overall cleanup function is called
[2026-03-09 18:08:52] 2026-03-09 17:08:12,876 | INFO     | --- collectZombieJob: --- 10, [3563540]
[2026-03-09 18:08:52] 2026-03-09 17:08:12,876 | INFO     | zombie collector waiting for pid 3563540
[2026-03-09 18:08:52] 2026-03-09 17:08:12,876 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 18:08:52] 2026-03-09 17:08:12,876 | INFO     | collected zombie processes
[2026-03-09 18:08:52] 2026-03-09 17:08:12,876 | INFO     | will attempt to kill all subprocesses of pid=3563540
[2026-03-09 18:08:52] 2026-03-09 17:08:13,334 | INFO     | process IDs to be killed: [3563540] (in reverse order)
[2026-03-09 18:08:52] 2026-03-09 17:08:13,545 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 18:08:52] 2026-03-09 17:08:13,546 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 18:08:52] 2026-03-09 17:08:13,571 | INFO     | did not find any defunct processes belonging to 3563540
[2026-03-09 18:08:52] 2026-03-09 17:08:13,595 | INFO     | did not find any defunct processes belonging to 3563540
[2026-03-09 18:08:52] 2026-03-09 17:08:13,595 | INFO     | ready for new job
[2026-03-09 18:08:52] 2026-03-09 17:08:13,595 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 18:08:52] 2026-03-09 17:08:13,596 | INFO     | **************************************
[2026-03-09 18:08:52] 2026-03-09 17:08:13,596 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 18:08:52] 2026-03-09 17:08:13,596 | INFO     | **************************************
[2026-03-09 18:08:52] 2026-03-09 17:08:13,596 | INFO     | 
[2026-03-09 18:08:52] 2026-03-09 17:08:13,602 | INFO     | architecture information:
[2026-03-09 18:08:52] 2026-03-09 17:08:13,602 | INFO     | executing command: cat /etc/os-release
[2026-03-09 18:08:52] 2026-03-09 17:08:13,616 | INFO     | cat /etc/os-release:
[2026-03-09 18:08:52] NAME="CentOS Linux"
[2026-03-09 18:08:52] VERSION="7 (Core)"
[2026-03-09 18:08:52] ID="centos"
[2026-03-09 18:08:52] ID_LIKE="rhel fedora"
[2026-03-09 18:08:52] VERSION_ID="7"
[2026-03-09 18:08:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 18:08:52] ANSI_COLOR="0;31"
[2026-03-09 18:08:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 18:08:52] HOME_URL="https://www.centos.org/"
[2026-03-09 18:08:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 18:08:52] 
[2026-03-09 18:08:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 18:08:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 18:08:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 18:08:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 18:08:52] 
[2026-03-09 18:08:52] 2026-03-09 17:08:13,616 | INFO     | **************************************
[2026-03-09 18:08:52] 2026-03-09 17:08:14,119 | INFO     | executing command: df -mP /var/lib/boinc/var/slot20/slots/7
[2026-03-09 18:08:52] 2026-03-09 17:08:14,135 | INFO     | sufficient remaining disk space (20122173440 B)
[2026-03-09 18:08:52] 2026-03-09 17:08:14,135 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 18:08:52] 2026-03-09 17:08:14,136 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 18:08:52] 2026-03-09 17:08:14,136 | INFO     | update_server=False
[2026-03-09 18:08:52] 2026-03-09 17:08:14,136 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 18:08:52] 2026-03-09 17:08:14,136 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 18:08:52] 2026-03-09 17:08:14,136 | INFO     | aborting loop
[2026-03-09 18:08:52] 2026-03-09 17:08:14,463 | INFO     | all payload control threads have been joined
[2026-03-09 18:08:52] 2026-03-09 17:08:14,542 | INFO     | all data control threads have been joined
[2026-03-09 18:08:52] 2026-03-09 17:08:14,769 | INFO     | all job control threads have been joined
[2026-03-09 18:08:52] 2026-03-09 17:08:15,140 | INFO     | [job] retrieve thread has finished
[2026-03-09 18:08:52] 2026-03-09 17:08:15,141 | INFO     | [job] job monitor thread has finished
[2026-03-09 18:08:52] 2026-03-09 17:08:15,163 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 18:08:52] 2026-03-09 17:08:15,468 | INFO     | [payload] control thread has finished
[2026-03-09 18:08:52] 2026-03-09 17:08:15,490 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 18:08:52] 2026-03-09 17:08:15,512 | INFO     | [job] validate thread has finished
[2026-03-09 18:08:52] 2026-03-09 17:08:15,547 | INFO     | [data] control thread has finished
[2026-03-09 18:08:52] 2026-03-09 17:08:15,553 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 18:08:52] 2026-03-09 17:08:15,788 | INFO     | [job] control thread has finished
[2026-03-09 18:08:52] 2026-03-09 17:08:16,022 | INFO     | [data] copytool_in thread has finished
[2026-03-09 18:08:52] 2026-03-09 17:08:16,032 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 18:08:52] 2026-03-09 17:08:16,254 | INFO     | [payload] failed_post thread has finished
[2026-03-09 18:08:52] 2026-03-09 17:08:16,567 | INFO     | [payload] validate_post thread has finished
[2026-03-09 18:08:52] 2026-03-09 17:08:16,860 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 18:08:52] 2026-03-09 17:08:17,168 | INFO     | [data] copytool_out thread has finished
[2026-03-09 18:08:52] 2026-03-09 17:08:17,351 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 18:08:52] 2026-03-09 17:08:17,865 | INFO     | [job] queue monitor thread has finished
[2026-03-09 18:08:52] 2026-03-09 17:08:21,357 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 18:08:52] 2026-03-09 17:08:24,842 | INFO     | job.realtimelogging is not enabled
[2026-03-09 18:08:52] 2026-03-09 17:08:25,847 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 18:08:52] 2026-03-09 17:08:35,514 [wrapper] supervise_pilot (15 min periods counter: 8)
[2026-03-09 18:08:52] 2026-03-09 17:08:44,615 | INFO     | PID=3556840 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 18:08:52] 2026-03-09 17:08:44,616 | INFO     | .. there are 58 such processes running
[2026-03-09 18:08:52] 2026-03-09 17:08:44,616 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 18:08:52] 2026-03-09 17:08:44,616 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 18:08:52] 2026-03-09 17:08:44,616 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 18:08:52] 2026-03-09 17:08:46,513 | INFO     | [monitor] cgroup control has ended
[2026-03-09 18:08:52] 2026-03-09 17:08:47,446 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23031461734208)>', '<ExcThread(monitor, started 23031230777088)>']
[2026-03-09 18:08:52] 2026-03-09 17:08:47,631 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 18:08:52] 2026-03-09 17:08:47,631 | INFO     | [monitor] control thread has ended
[2026-03-09 18:08:52] 2026-03-09 17:08:52,471 | INFO     | all workflow threads have been joined
[2026-03-09 18:08:52] 2026-03-09 17:08:52,471 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 18:08:52] 2026-03-09 17:08:52,471 | INFO     | traces error code: 0
[2026-03-09 18:08:52] 2026-03-09 17:08:52,472 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 18:08:52] 2026-03-09 17:08:52,642 [wrapper] ==== pilot stdout END ====
[2026-03-09 18:08:52] 2026-03-09 17:08:52,645 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 18:08:52] 2026-03-09 17:08:52,647 [wrapper] pilotpid: 3556840
[2026-03-09 18:08:52] 2026-03-09 17:08:52,648 [wrapper] Pilot exit status: 0
[2026-03-09 18:08:52] 2026-03-09 17:08:52,654 [wrapper] pandaids: 7047073501 7047073501
[2026-03-09 18:08:52] 2026-03-09 17:08:52,770 [wrapper] cleanup supervisor_pilot  504101 3556841
[2026-03-09 18:08:52] 2026-03-09 17:08:52,772 [wrapper] Test setup, not cleaning
[2026-03-09 18:08:52] 2026-03-09 17:08:52,775 [wrapper] apfmon messages muted
[2026-03-09 18:08:52] 2026-03-09 17:08:52,778 [wrapper] ==== wrapper stdout END ====
[2026-03-09 18:08:52] 2026-03-09 17:08:52,780 [wrapper] ==== wrapper stderr END ====
[2026-03-09 18:08:52]  *** Error codes and diagnostics ***
[2026-03-09 18:08:52]     "exeErrorCode": 0,
[2026-03-09 18:08:52]     "exeErrorDiag": "",
[2026-03-09 18:08:52]     "pilotErrorCode": 0,
[2026-03-09 18:08:52]     "pilotErrorDiag": "",
[2026-03-09 18:08:52]  *** Listing of results directory ***
[2026-03-09 18:08:52] total 881900
[2026-03-09 18:08:52] drwx------. 5 boinc boinc      4096 Feb  2 16:00 pilot3
[2026-03-09 18:08:52] -rw-r--r--. 1 boinc boinc      5111 Mar  9 08:59 queuedata.json
[2026-03-09 18:08:52] -rw-r--r--. 1 boinc boinc    584627 Mar  9 08:59 pilot3.tar.gz
[2026-03-09 18:08:52] -rwx------. 1 boinc boinc     36322 Mar  9 08:59 runpilot2-wrapper.sh
[2026-03-09 18:08:52] -rw-r--r--. 1 boinc boinc       100 Mar  9 14:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 18:08:52] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 14:53 run_atlas
[2026-03-09 18:08:52] -rw-r--r--. 1 boinc boinc       105 Mar  9 14:53 job.xml
[2026-03-09 18:08:52] -rw-r--r--. 3 boinc boinc 327860959 Mar  9 14:53 EVNT.48998020._000012.pool.root.1
[2026-03-09 18:08:52] -rw-r--r--. 3 boinc boinc 327860959 Mar  9 14:53 ATLAS.root_0
[2026-03-09 18:08:52] -rw-r--r--. 2 boinc boinc     15845 Mar  9 14:53 start_atlas.sh
[2026-03-09 18:08:52] drwxrwx--x. 2 boinc boinc      4096 Mar  9 14:53 shared
[2026-03-09 18:08:52] -rw-r--r--. 2 boinc boinc    597964 Mar  9 14:53 input.tar.gz
[2026-03-09 18:08:52] -rw-r--r--. 1 boinc boinc         0 Mar  9 14:53 boinc_lockfile
[2026-03-09 18:08:52] -rw-r--r--. 1 boinc boinc      2606 Mar  9 16:23 pandaJob.out
[2026-03-09 18:08:52] -rw-------. 1 boinc boinc   1002554 Mar  9 16:23 agis_schedconf.cvmfs.json
[2026-03-09 18:08:52] -rw-------. 1 boinc boinc       444 Mar  9 16:23 workernode_map.json
[2026-03-09 18:08:52] -rw-r--r--. 1 boinc boinc      6710 Mar  9 16:23 init_data.xml
[2026-03-09 18:08:52] -rw-------. 1 boinc boinc 241046431 Mar  9 18:07 HITS.48998022._000279.pool.root.1
[2026-03-09 18:08:52] -rw-------. 1 boinc boinc        97 Mar  9 18:07 pilot_heartbeat.json
[2026-03-09 18:08:52] -rw-r--r--. 1 boinc boinc       531 Mar  9 18:08 boinc_task_state.xml
[2026-03-09 18:08:52] -rw-------. 1 boinc boinc      1031 Mar  9 18:08 memory_monitor_summary.json
[2026-03-09 18:08:52] -rw-------. 1 boinc boinc   1511578 Mar  9 18:08 agis_ddmendpoints.agis.ALL.json
[2026-03-09 18:08:52] -rw-------. 1 boinc boinc    274348 Mar  9 18:08 log.48998022._000279.job.log.tgz.1
[2026-03-09 18:08:52] -rw-------. 1 boinc boinc      6346 Mar  9 18:08 heartbeat.json
[2026-03-09 18:08:52] -rw-r--r--. 1 boinc boinc      8192 Mar  9 18:08 boinc_mmap_file
[2026-03-09 18:08:52] -rw-r--r--. 1 boinc boinc        28 Mar  9 18:08 wrapper_checkpoint.txt
[2026-03-09 18:08:52] -rw-------. 1 boinc boinc      4901 Mar  9 18:08 pilotlog.txt
[2026-03-09 18:08:52] -rw-------. 1 boinc boinc    907210 Mar  9 18:08 log.48998022._000279.job.log.1
[2026-03-09 18:08:52] -rw-------. 1 boinc boinc       357 Mar  9 18:08 output.list
[2026-03-09 18:08:52] -rw-r--r--. 1 boinc boinc       620 Mar  9 18:08 runtime_log
[2026-03-09 18:08:52] -rw-------. 1 boinc boinc   1198080 Mar  9 18:08 result.tar.gz
[2026-03-09 18:08:52] -rw-r--r--. 1 boinc boinc      9281 Mar  9 18:08 runtime_log.err
[2026-03-09 18:08:52] -rw-------. 1 boinc boinc       790 Mar  9 18:08 K6YMDmshkJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmxnbLDm2MufNo.diag
[2026-03-09 18:08:52] -rw-r--r--. 1 boinc boinc     22583 Mar  9 18:08 stderr.txt
[2026-03-09 18:08:52] HITS file was successfully produced:
[2026-03-09 18:08:52] -rw-------. 1 boinc boinc 241046431 Mar  9 18:07 shared/HITS.pool.root.1
[2026-03-09 18:08:52]  *** Contents of shared directory: ***
[2026-03-09 18:08:52] total 557356
[2026-03-09 18:08:52] -rw-r--r--. 3 boinc boinc 327860959 Mar  9 14:53 ATLAS.root_0
[2026-03-09 18:08:52] -rw-r--r--. 2 boinc boinc     15845 Mar  9 14:53 start_atlas.sh
[2026-03-09 18:08:52] -rw-r--r--. 2 boinc boinc    597964 Mar  9 14:53 input.tar.gz
[2026-03-09 18:08:52] -rw-------. 1 boinc boinc 241046431 Mar  9 18:07 HITS.pool.root.1
[2026-03-09 18:08:52] -rw-------. 1 boinc boinc   1198080 Mar  9 18:08 result.tar.gz
18:08:54 (3548682): run_atlas exited; CPU time 24181.789378
18:08:54 (3548682): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN