Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
08:21:17 (3126042): wrapper (7.7.26015): starting
08:21:17 (3126042): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 08:21:17] Arguments: --nthreads 4
[2026-03-09 08:21:17] Threads: 4
[2026-03-09 08:21:17] Checking for CVMFS
[2026-03-09 08:21:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 08:21:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 08:21:18] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 08:21:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 08:21:19] 2.13.3.0 1437033 4457 54456 157075 1 188 3225775 4096000 2748 130560 0 3391195 99.991 156196 1056 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-09 08:21:19] CVMFS is ok
[2026-03-09 08:21:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 08:21:19] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-09 08:21:19] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-09 08:21:19] Further information can be found at the LHC@home message board.
[2026-03-09 08:21:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 08:21:19] Checking for apptainer binary...
[2026-03-09 08:21:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 08:21:19] Running /usr/bin/apptainer --version
[2026-03-09 08:21:19] apptainer version 1.4.5
[2026-03-09 08:21:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 08:21:19] T5810-Ubuntu
[2026-03-09 08:21:19] apptainer works
[2026-03-09 08:21:19] Set ATHENA_PROC_NUMBER=4
[2026-03-09 08:21:19] Set ATHENA_CORE_NUMBER=4
[2026-03-09 08:21:19] Starting ATLAS job with PandaID=7034679331
[2026-03-09 08:21:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 11:03:59]  *** The last 200 lines of the pilot log: ***
[2026-03-09 11:03:59] 2026-03-09 15:03:34,655 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 11:03:59] 2026-03-09 15:03:34,656 | INFO     | log transfer has been attempted: DONE
[2026-03-09 11:03:59] 2026-03-09 15:03:34,656 | INFO     | job 7034679331 has finished - writing final server update
[2026-03-09 11:03:59] 2026-03-09 15:03:34,656 | INFO     | total number of processed events: 400 (read)
[2026-03-09 11:03:59] 2026-03-09 15:03:34,664 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/19/PanDA_Pilot-7034679331/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 11:03:59] 2026-03-09 15:03:34,664 | INFO     | extracted standard info from prmon json
[2026-03-09 11:03:59] 2026-03-09 15:03:34,664 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 11:03:59] 2026-03-09 15:03:34,664 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 11:03:59] 2026-03-09 15:03:34,665 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 11:03:59] 2026-03-09 15:03:34,665 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 11:03:59] 2026-03-09 15:03:34,668 | INFO     | fitting pss+swap vs Time
[2026-03-09 11:03:59] 2026-03-09 15:03:34,669 | INFO     | sum of square deviations: 1246386160.0
[2026-03-09 11:03:59] 2026-03-09 15:03:34,670 | INFO     | sum of deviations: 15127467104.0
[2026-03-09 11:03:59] 2026-03-09 15:03:34,670 | INFO     | mean x: 1773063740.0
[2026-03-09 11:03:59] 2026-03-09 15:03:34,670 | INFO     | mean y: 2293185.6603773586
[2026-03-09 11:03:59] 2026-03-09 15:03:34,670 | INFO     | intersect: -21517492785.12191
[2026-03-09 11:03:59] 2026-03-09 15:03:34,670 | INFO     | chi2: 1.4911415881457084
[2026-03-09 11:03:59] 2026-03-09 15:03:34,671 | INFO     | sum of square deviations: 1132458442.5
[2026-03-09 11:03:59] 2026-03-09 15:03:34,672 | INFO     | sum of deviations: 14660851843.499996
[2026-03-09 11:03:59] 2026-03-09 15:03:34,672 | INFO     | mean x: 1773063587.5
[2026-03-09 11:03:59] 2026-03-09 15:03:34,672 | INFO     | mean y: 2292560.8636363638
[2026-03-09 11:03:59] 2026-03-09 15:03:34,672 | INFO     | intersect: -22951858858.641624
[2026-03-09 11:03:59] 2026-03-09 15:03:34,672 | INFO     | chi2: 1.4927615537526504
[2026-03-09 11:03:59] 2026-03-09 15:03:34,672 | INFO     | current chi2=1.4927615537526504 (change=-0.10863928816823402 %)
[2026-03-09 11:03:59] 2026-03-09 15:03:34,673 | INFO     | right removable region: 153
[2026-03-09 11:03:59] 2026-03-09 15:03:34,673 | INFO     | sum of square deviations: 1132458442.5
[2026-03-09 11:03:59] 2026-03-09 15:03:34,674 | INFO     | sum of deviations: -6480010235.999995
[2026-03-09 11:03:59] 2026-03-09 15:03:34,674 | INFO     | mean x: 1773063892.5
[2026-03-09 11:03:59] 2026-03-09 15:03:34,674 | INFO     | mean y: 2321662.8311688313
[2026-03-09 11:03:59] 2026-03-09 15:03:34,674 | INFO     | intersect: 10147923250.751686
[2026-03-09 11:03:59] 2026-03-09 15:03:34,675 | INFO     | chi2: 0.03239588759988019
[2026-03-09 11:03:59] 2026-03-09 15:03:34,675 | INFO     | current chi2=0.03239588759988019 (change=97.8274438955079 %)
[2026-03-09 11:03:59] 2026-03-09 15:03:34,675 | INFO     | sum of square deviations: 1025693650.0
[2026-03-09 11:03:59] 2026-03-09 15:03:34,676 | INFO     | sum of deviations: -5421485349.0
[2026-03-09 11:03:59] 2026-03-09 15:03:34,676 | INFO     | mean x: 1773064045.0
[2026-03-09 11:03:59] 2026-03-09 15:03:34,676 | INFO     | mean y: 2320123.3087248323
[2026-03-09 11:03:59] 2026-03-09 15:03:34,676 | INFO     | intersect: 9374163989.950754
[2026-03-09 11:03:59] 2026-03-09 15:03:34,677 | INFO     | chi2: 0.02928780271753873
[2026-03-09 11:03:59] 2026-03-09 15:03:34,677 | INFO     | current chi2=0.02928780271753873 (change=9.594072311675001 %)
[2026-03-09 11:03:59] 2026-03-09 15:03:34,677 | INFO     | left removable region: 20
[2026-03-09 11:03:59] 2026-03-09 15:03:34,677 | INFO     | sum of square deviations: 729472282.0
[2026-03-09 11:03:59] 2026-03-09 15:03:34,678 | INFO     | sum of deviations: -830683177.0000004
[2026-03-09 11:03:59] 2026-03-09 15:03:34,678 | INFO     | mean x: 1773064167.0
[2026-03-09 11:03:59] 2026-03-09 15:03:34,679 | INFO     | mean y: 2312877.714285714
[2026-03-09 11:03:59] 2026-03-09 15:03:34,679 | INFO     | intersect: 2021381472.3842325
[2026-03-09 11:03:59] 2026-03-09 15:03:34,679 | INFO     | chi2: 0.01455105647552405
[2026-03-09 11:03:59] 2026-03-09 15:03:34,679 | INFO     | current memory leak: -1.14 B/s (using 133 data points, chi2=0.01)
[2026-03-09 11:03:59] 2026-03-09 15:03:34,680 | INFO     | could have reported an average CPU frequency of 2516 MHz (9 samples)
[2026-03-09 11:03:59] 2026-03-09 15:03:34,680 | INFO     | ..............................
[2026-03-09 11:03:59] 2026-03-09 15:03:34,680 | INFO     | . Timing measurements:
[2026-03-09 11:03:59] 2026-03-09 15:03:34,680 | INFO     | . get job = 0 s
[2026-03-09 11:03:59] 2026-03-09 15:03:34,680 | INFO     | . initial setup = 7 s
[2026-03-09 11:03:59] 2026-03-09 15:03:34,680 | INFO     | . payload setup = 6 s
[2026-03-09 11:03:59] 2026-03-09 15:03:34,680 | INFO     | . stage-in = 0 s
[2026-03-09 11:03:59] 2026-03-09 15:03:34,681 | INFO     | . payload execution = 9691 s
[2026-03-09 11:03:59] 2026-03-09 15:03:34,681 | INFO     | . stage-out = 0 s
[2026-03-09 11:03:59] 2026-03-09 15:03:34,681 | INFO     | . log creation = 0 s
[2026-03-09 11:03:59] 2026-03-09 15:03:34,681 | INFO     | ..............................
[2026-03-09 11:03:59] 2026-03-09 15:03:34,784 | INFO     | 
[2026-03-09 11:03:59] 2026-03-09 15:03:34,785 | INFO     | job summary report
[2026-03-09 11:03:59] 2026-03-09 15:03:34,785 | INFO     | --------------------------------------------------
[2026-03-09 11:03:59] 2026-03-09 15:03:34,785 | INFO     | PanDA job id: 7034679331
[2026-03-09 11:03:59] 2026-03-09 15:03:34,785 | INFO     | task id: 48700930
[2026-03-09 11:03:59] 2026-03-09 15:03:34,785 | INFO     | errors: (none)
[2026-03-09 11:03:59] 2026-03-09 15:03:34,785 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 11:03:59] 2026-03-09 15:03:34,785 | INFO     | pilot state: finished 
[2026-03-09 11:03:59] 2026-03-09 15:03:34,785 | INFO     | transexitcode: 0
[2026-03-09 11:03:59] 2026-03-09 15:03:34,786 | INFO     | exeerrorcode: 0
[2026-03-09 11:03:59] 2026-03-09 15:03:34,786 | INFO     | exeerrordiag: 
[2026-03-09 11:03:59] 2026-03-09 15:03:34,786 | INFO     | exitcode: 0
[2026-03-09 11:03:59] 2026-03-09 15:03:34,786 | INFO     | exitmsg: OK
[2026-03-09 11:03:59] 2026-03-09 15:03:34,786 | INFO     | cpuconsumptiontime: 37525 s
[2026-03-09 11:03:59] 2026-03-09 15:03:34,786 | INFO     | nevents: 400
[2026-03-09 11:03:59] 2026-03-09 15:03:34,786 | INFO     | neventsw: 0
[2026-03-09 11:03:59] 2026-03-09 15:03:34,786 | INFO     | pid: 3134989
[2026-03-09 11:03:59] 2026-03-09 15:03:34,786 | INFO     | pgrp: 3134989
[2026-03-09 11:03:59] 2026-03-09 15:03:34,786 | INFO     | corecount: 4
[2026-03-09 11:03:59] 2026-03-09 15:03:34,787 | INFO     | event service: False
[2026-03-09 11:03:59] 2026-03-09 15:03:34,787 | INFO     | sizes: {0: 2279756, 1: 2280217, 12: 2280217, 9700: 2308724, 9701: 2317752, 9704: 2318194}
[2026-03-09 11:03:59] 2026-03-09 15:03:34,787 | INFO     | --------------------------------------------------
[2026-03-09 11:03:59] 2026-03-09 15:03:34,787 | INFO     | 
[2026-03-09 11:03:59] 2026-03-09 15:03:34,787 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/19
[2026-03-09 11:03:59] 2026-03-09 15:03:34,792 | INFO     | time since job start (9716s) is within the limit (349056.0s)
[2026-03-09 11:03:59] 2026-03-09 15:03:34,811 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 11:03:59] 2026-03-09 15:03:34,811 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 11:03:59] 2026-03-09 15:03:34,811 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 11:03:59] 2026-03-09 15:03:34,812 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 11:03:59] 2026-03-09 15:03:34,812 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 11:03:59] 2026-03-09 15:03:34,812 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 11:03:59] 2026-03-09 15:03:34,812 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 11:03:59] 2026-03-09 15:03:34,812 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 11:03:59] 2026-03-09 15:03:34,812 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 11:03:59] 2026-03-09 15:03:34,812 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 11:03:59] 2026-03-09 15:03:34,812 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 11:03:59] 2026-03-09 15:03:34,812 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 11:03:59] 2026-03-09 15:03:34,813 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 11:03:59] 2026-03-09 15:03:34,813 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 11:03:59] 2026-03-09 15:03:34,813 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 11:03:59] 2026-03-09 15:03:34,813 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 11:03:59] 2026-03-09 15:03:34,813 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 11:03:59] 2026-03-09 15:03:34,813 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 11:03:59] 2026-03-09 15:03:34,813 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 11:03:59] 2026-03-09 15:03:34,813 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 11:03:59] 2026-03-09 15:03:34,814 | INFO     | job 7034679331 has completed (purged errors)
[2026-03-09 11:03:59] 2026-03-09 15:03:34,814 | INFO     | overall cleanup function is called
[2026-03-09 11:03:59] 2026-03-09 15:03:35,822 | INFO     | --- collectZombieJob: --- 10, [3134989]
[2026-03-09 11:03:59] 2026-03-09 15:03:35,822 | INFO     | zombie collector waiting for pid 3134989
[2026-03-09 11:03:59] 2026-03-09 15:03:35,822 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 11:03:59] 2026-03-09 15:03:35,822 | INFO     | collected zombie processes
[2026-03-09 11:03:59] 2026-03-09 15:03:35,822 | INFO     | will attempt to kill all subprocesses of pid=3134989
[2026-03-09 11:03:59] 2026-03-09 15:03:36,302 | INFO     | PID=3130322 has CPU usage=10.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-09 11:03:59] 2026-03-09 15:03:36,302 | INFO     | .. there are 4 such processes running
[2026-03-09 11:03:59] 2026-03-09 15:03:36,346 | INFO     | process IDs to be killed: [3134989] (in reverse order)
[2026-03-09 11:03:59] 2026-03-09 15:03:36,414 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 11:03:59] 2026-03-09 15:03:36,415 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 11:03:59] 2026-03-09 15:03:36,421 | INFO     | did not find any defunct processes belonging to 3134989
[2026-03-09 11:03:59] 2026-03-09 15:03:36,426 | INFO     | did not find any defunct processes belonging to 3134989
[2026-03-09 11:03:59] 2026-03-09 15:03:36,427 | INFO     | ready for new job
[2026-03-09 11:03:59] 2026-03-09 15:03:36,427 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 11:03:59] 2026-03-09 15:03:36,429 | INFO     | **************************************
[2026-03-09 11:03:59] 2026-03-09 15:03:36,429 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 11:03:59] 2026-03-09 15:03:36,429 | INFO     | **************************************
[2026-03-09 11:03:59] 2026-03-09 15:03:36,429 | INFO     | 
[2026-03-09 11:03:59] 2026-03-09 15:03:36,432 | INFO     | architecture information:
[2026-03-09 11:03:59] 2026-03-09 15:03:36,433 | INFO     | executing command: cat /etc/os-release
[2026-03-09 11:03:59] 2026-03-09 15:03:36,448 | INFO     | cat /etc/os-release:
[2026-03-09 11:03:59] NAME="CentOS Linux"
[2026-03-09 11:03:59] VERSION="7 (Core)"
[2026-03-09 11:03:59] ID="centos"
[2026-03-09 11:03:59] ID_LIKE="rhel fedora"
[2026-03-09 11:03:59] VERSION_ID="7"
[2026-03-09 11:03:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 11:03:59] ANSI_COLOR="0;31"
[2026-03-09 11:03:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 11:03:59] HOME_URL="https://www.centos.org/"
[2026-03-09 11:03:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 11:03:59] 
[2026-03-09 11:03:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 11:03:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 11:03:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 11:03:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 11:03:59] 
[2026-03-09 11:03:59] 2026-03-09 15:03:36,449 | INFO     | **************************************
[2026-03-09 11:03:59] 2026-03-09 15:03:36,951 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/19
[2026-03-09 11:03:59] 2026-03-09 15:03:36,966 | INFO     | sufficient remaining disk space (406251896832 B)
[2026-03-09 11:03:59] 2026-03-09 15:03:36,967 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 11:03:59] 2026-03-09 15:03:36,967 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 11:03:59] 2026-03-09 15:03:36,967 | INFO     | update_server=False
[2026-03-09 11:03:59] 2026-03-09 15:03:36,967 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 11:03:59] 2026-03-09 15:03:36,967 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-09 11:03:59] 2026-03-09 15:03:36,968 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 11:03:59] 2026-03-09 15:03:36,968 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 11:03:59] 2026-03-09 15:03:36,968 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 11:03:59] 2026-03-09 15:03:36,968 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 11:03:59] 2026-03-09 15:03:37,045 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 11:03:59] 2026-03-09 15:03:37,625 | WARNING  | process 3134989 can no longer be monitored (due to stat problems) - aborting
[2026-03-09 11:03:59] 2026-03-09 15:03:37,741 | INFO     | all data control threads have been joined
[2026-03-09 11:03:59] 2026-03-09 15:03:37,796 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/19/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 11:03:59] 2026-03-09 15:03:37,972 | INFO     | [job] retrieve thread has finished
[2026-03-09 11:03:59] 2026-03-09 15:03:38,061 | INFO     | number of running child processes to parent process 3134989: 1
[2026-03-09 11:03:59] 2026-03-09 15:03:38,061 | INFO     | maximum number of monitored processes: 6
[2026-03-09 11:03:59] 2026-03-09 15:03:38,061 | INFO     | aborting job monitoring since job object (job id=7034679331) has expired
[2026-03-09 11:03:59] 2026-03-09 15:03:38,061 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 11:03:59] 2026-03-09 15:03:38,062 | INFO     | [payload] validate_post thread has finished
[2026-03-09 11:03:59] 2026-03-09 15:03:38,062 | INFO     | will abort loop
[2026-03-09 11:03:59] 2026-03-09 15:03:38,196 | INFO     | [payload] failed_post thread has finished
[2026-03-09 11:03:59] 2026-03-09 15:03:38,278 | INFO     | all payload control threads have been joined
[2026-03-09 11:03:59] 2026-03-09 15:03:38,294 | INFO     | [job] validate thread has finished
[2026-03-09 11:03:59] 2026-03-09 15:03:38,350 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 11:03:59] 2026-03-09 15:03:38,553 | INFO     | all job control threads have been joined
[2026-03-09 11:03:59] 2026-03-09 15:03:38,604 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 11:03:59] 2026-03-09 15:03:38,746 | INFO     | [data] control thread has finished
[2026-03-09 11:03:59] 2026-03-09 15:03:38,900 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 11:03:59] 2026-03-09 15:03:39,050 | INFO     | [data] copytool_out thread has finished
[2026-03-09 11:03:59] 2026-03-09 15:03:39,054 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 11:03:59] 2026-03-09 15:03:39,068 | INFO     | [job] job monitor thread has finished
[2026-03-09 11:03:59] 2026-03-09 15:03:39,195 | INFO     | [data] copytool_in thread has finished
[2026-03-09 11:03:59] 2026-03-09 15:03:39,283 | INFO     | [payload] control thread has finished
[2026-03-09 11:03:59] 2026-03-09 15:03:39,558 | INFO     | [job] control thread has finished
[2026-03-09 11:03:59] 2026-03-09 15:03:39,790 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 11:03:59] 2026-03-09 15:03:40,796 | INFO     | [job] queue monitor thread has finished
[2026-03-09 11:03:59] 2026-03-09 15:03:40,975 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 11:03:59] 2026-03-09 15:03:53,492 | INFO     | [monitor] cgroup control has ended
[2026-03-09 11:03:59] 2026-03-09 15:03:54,497 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139931173275456)>', '<ExcThread(monitor, started 139930697197312)>']
[2026-03-09 11:03:59] 2026-03-09 15:03:55,059 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 11:03:59] 2026-03-09 15:03:55,059 | INFO     | [monitor] control thread has ended
[2026-03-09 11:03:59] 2026-03-09 15:03:59,523 | INFO     | all workflow threads have been joined
[2026-03-09 11:03:59] 2026-03-09 15:03:59,523 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 11:03:59] 2026-03-09 15:03:59,523 | INFO     | traces error code: 0
[2026-03-09 11:03:59] 2026-03-09 15:03:59,523 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 11:03:59] 2026-03-09 15:03:59,628 [wrapper] ==== pilot stdout END ====
[2026-03-09 11:03:59] 2026-03-09 15:03:59,631 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 11:03:59] 2026-03-09 15:03:59,634 [wrapper] pilotpid: 3130322
[2026-03-09 11:03:59] 2026-03-09 15:03:59,636 [wrapper] Pilot exit status: 0
[2026-03-09 11:03:59] 2026-03-09 15:03:59,654 [wrapper] pandaids: 7034679331
[2026-03-09 11:03:59] 2026-03-09 15:03:59,701 [wrapper] cleanup supervisor_pilot 3203785 3130323
[2026-03-09 11:03:59] 2026-03-09 15:03:59,705 [wrapper] Test setup, not cleaning
[2026-03-09 11:03:59] 2026-03-09 15:03:59,708 [wrapper] apfmon messages muted
[2026-03-09 11:03:59] 2026-03-09 15:03:59,711 [wrapper] ==== wrapper stdout END ====
[2026-03-09 11:03:59] 2026-03-09 15:03:59,714 [wrapper] ==== wrapper stderr END ====
[2026-03-09 11:03:59]  *** Error codes and diagnostics ***
[2026-03-09 11:03:59]     "exeErrorCode": 0,
[2026-03-09 11:03:59]     "exeErrorDiag": "",
[2026-03-09 11:03:59]     "pilotErrorCode": 0,
[2026-03-09 11:03:59]     "pilotErrorDiag": "",
[2026-03-09 11:03:59]  *** Listing of results directory ***
[2026-03-09 11:03:59] total 339460
[2026-03-09 11:03:59] -rw-r--r-- 1 whitlerd whitlerd    584627 Mar  1 05:14 pilot3.tar.gz
[2026-03-09 11:03:59] -rwx------ 1 whitlerd whitlerd     36322 Mar  1 05:14 runpilot2-wrapper.sh
[2026-03-09 11:03:59] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar  1 05:15 queuedata.json
[2026-03-09 11:03:59] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar  9 08:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 11:03:59] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar  9 08:21 run_atlas
[2026-03-09 11:03:59] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar  9 08:21 job.xml
[2026-03-09 11:03:59] -rw-r--r-- 2 whitlerd whitlerd 189332183 Mar  9 08:21 EVNT.48700928._000046.pool.root.1
[2026-03-09 11:03:59] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  9 08:21 start_atlas.sh
[2026-03-09 11:03:59] drwxrwx--x 2 whitlerd whitlerd      4096 Mar  9 08:21 shared
[2026-03-09 11:03:59] -rw-r--r-- 2 whitlerd whitlerd    597938 Mar  9 08:21 input.tar.gz
[2026-03-09 11:03:59] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  9 08:21 boinc_setup_complete
[2026-03-09 11:03:59] -rw-rw-r-- 1 whitlerd whitlerd      9087 Mar  9 08:21 init_data.xml
[2026-03-09 11:03:59] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  9 08:21 boinc_lockfile
[2026-03-09 11:03:59] -rw-rw-r-- 1 whitlerd whitlerd      2518 Mar  9 08:21 pandaJob.out
[2026-03-09 11:03:59] -rw------- 1 whitlerd whitlerd    990710 Mar  9 08:21 agis_schedconf.cvmfs.json
[2026-03-09 11:03:59] -rw------- 1 whitlerd whitlerd   1511578 Mar  9 08:21 agis_ddmendpoints.agis.ALL.json
[2026-03-09 11:03:59] -rw------- 1 whitlerd whitlerd       434 Mar  9 08:21 workernode_map.json
[2026-03-09 11:03:59] drwx------ 5 whitlerd whitlerd      4096 Mar  9 08:21 pilot3
[2026-03-09 11:03:59] -rw------- 1 whitlerd whitlerd        95 Mar  9 11:02 pilot_heartbeat.json
[2026-03-09 11:03:59] -rw------- 1 whitlerd whitlerd 150863112 Mar  9 11:02 HITS.48700930._001147.pool.root.1
[2026-03-09 11:03:59] -rw-rw-r-- 1 whitlerd whitlerd       529 Mar  9 11:03 boinc_task_state.xml
[2026-03-09 11:03:59] -rw------- 1 whitlerd whitlerd      1029 Mar  9 11:03 memory_monitor_summary.json
[2026-03-09 11:03:59] -rw------- 1 whitlerd whitlerd    338294 Mar  9 11:03 log.48700930._001147.job.log.tgz.1
[2026-03-09 11:03:59] -rw------- 1 whitlerd whitlerd      6334 Mar  9 11:03 heartbeat.json
[2026-03-09 11:03:59] -rw-rw-r-- 1 whitlerd whitlerd        27 Mar  9 11:03 wrapper_checkpoint.txt
[2026-03-09 11:03:59] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar  9 11:03 boinc_mmap_file
[2026-03-09 11:03:59] -rw------- 1 whitlerd whitlerd      5100 Mar  9 11:03 pilotlog.txt
[2026-03-09 11:03:59] -rw------- 1 whitlerd whitlerd   1408682 Mar  9 11:03 log.48700930._001147.job.log.1
[2026-03-09 11:03:59] -rw------- 1 whitlerd whitlerd       357 Mar  9 11:03 output.list
[2026-03-09 11:03:59] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar  9 11:03 runtime_log
[2026-03-09 11:03:59] -rw------- 1 whitlerd whitlerd   1761280 Mar  9 11:03 result.tar.gz
[2026-03-09 11:03:59] -rw-rw-r-- 1 whitlerd whitlerd      9035 Mar  9 11:03 runtime_log.err
[2026-03-09 11:03:59] -rw------- 1 whitlerd whitlerd       647 Mar  9 11:03 fCYMDm1zsG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmgd9KDm3pAabm.diag
[2026-03-09 11:03:59] -rw-rw-r-- 1 whitlerd whitlerd     21422 Mar  9 11:03 stderr.txt
[2026-03-09 11:03:59] HITS file was successfully produced:
[2026-03-09 11:03:59] -rw------- 1 whitlerd whitlerd 150863112 Mar  9 11:02 shared/HITS.pool.root.1
[2026-03-09 11:03:59]  *** Contents of shared directory: ***
[2026-03-09 11:03:59] total 334552
[2026-03-09 11:03:59] -rw-r--r-- 2 whitlerd whitlerd 189332183 Mar  9 08:21 ATLAS.root_0
[2026-03-09 11:03:59] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  9 08:21 start_atlas.sh
[2026-03-09 11:03:59] -rw-r--r-- 2 whitlerd whitlerd    597938 Mar  9 08:21 input.tar.gz
[2026-03-09 11:03:59] -rw------- 1 whitlerd whitlerd 150863112 Mar  9 11:02 HITS.pool.root.1
[2026-03-09 11:03:59] -rw------- 1 whitlerd whitlerd   1761280 Mar  9 11:03 result.tar.gz
11:04:01 (3126042): run_atlas exited; CPU time 37825.507983
11:04:01 (3126042): called boinc_finish(0)

</stderr_txt>
]]>

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