Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:09:02 (511587): wrapper (7.7.26015): starting
18:09:02 (511587): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 18:09:02] Arguments: --nthreads 4
[2026-03-09 18:09:02] Threads: 4
[2026-03-09 18:09:02] Checking for CVMFS
[2026-03-09 18:09:02] No cvmfs_config command found, will try listing directly
[2026-03-09 18:09:02] CVMFS is ok
[2026-03-09 18:09:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 18:09:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 18:09:02] Further information can be found at the LHC@home message board.
[2026-03-09 18:09:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 18:09:02] Checking for apptainer binary...
[2026-03-09 18:09:02] which: no apptainer in ((null))
[2026-03-09 18:09:02] apptainer is not installed, using version from CVMFS
[2026-03-09 18:09:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 18:09:02] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot20/slots/7/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-03-09 18:09:02] apptainer works
[2026-03-09 18:09:02] Set ATHENA_PROC_NUMBER=4
[2026-03-09 18:09:02] Set ATHENA_CORE_NUMBER=4
[2026-03-09 18:09:02] Starting ATLAS job with PandaID=7047226080
[2026-03-09 18:09:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot20/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 19:49:30]  *** The last 200 lines of the pilot log: ***
[2026-03-09 19:49:30]  filesize=274552
[2026-03-09 19:49:30]  filetype=log
[2026-03-09 19:49:30]  guid=c613c899-a4ee-4277-b5b6-7be4a74d3ebc
[2026-03-09 19:49:30]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-09 19:49:30]  is_altstaged=None
[2026-03-09 19:49:30]  is_tar=False
[2026-03-09 19:49:30]  lfn=log.48998022._001532.job.log.tgz.1
[2026-03-09 19:49:30]  mtime=0
[2026-03-09 19:49:30]  protocol_id=None
[2026-03-09 19:49:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-09 19:49:30]  replicas=None
[2026-03-09 19:49:30]  scope=mc23_13p6TeV
[2026-03-09 19:49:30]  status=None
[2026-03-09 19:49:30]  status_code=0
[2026-03-09 19:49:30]  storage_token=
[2026-03-09 19:49:30]  surl=/var/lib/boinc/var/slot20/slots/7/PanDA_Pilot-7047226080/log.48998022._001532.job.log.tgz.1
[2026-03-09 19:49:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e8/2e/log.48998022._001532.job.log.tgz.1
[2026-03-09 19:49:30]  workdir=None
[2026-03-09 19:49:30] ]
[2026-03-09 19:49:30] 2026-03-09 18:48:42,707 | INFO     | transferring file log.48998022._001532.job.log.tgz.1 from /var/lib/boinc/var/slot20/slots/7/PanDA_Pilot-7047226080/log.48998022._001532.job.log.tgz.1 to /var/lib/b
[2026-03-09 19:49:30] 2026-03-09 18:48:42,707 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot20/slots/7/PanDA_Pilot-7047226080/log.48998022._001532.job.log.tgz.1 /var/lib/boinc/var/slot20/slots/7/lo
[2026-03-09 19:49:30] 2026-03-09 18:48:42,722 | INFO     | adding to output.list: log.48998022._001532.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e8/2e/log.48998022._001532.job.log.tg
[2026-03-09 19:49:30] 2026-03-09 18:48:42,723 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-09 19:49:30] 2026-03-09 18:48:42,723 | INFO     | summary of transferred files:
[2026-03-09 19:49:30] 2026-03-09 18:48:42,723 | INFO     |  -- lfn=log.48998022._001532.job.log.tgz.1, status_code=0, status=transferred
[2026-03-09 19:49:30] 2026-03-09 18:48:42,723 | INFO     | stage-out finished correctly
[2026-03-09 19:49:30] 2026-03-09 18:48:43,410 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-09 19:49:30] 2026-03-09 18:48:44,282 | INFO     | monitor loop #436: job 0:7047226080 is in state 'finished'
[2026-03-09 19:49:30] 2026-03-09 18:48:44,282 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-09 19:49:30] 2026-03-09 18:48:44,668 | INFO     | time since job start (5969s) is within the limit (349056.0s)
[2026-03-09 19:49:30] 2026-03-09 18:48:45,675 | INFO     | job 7047226080 has state=finished
[2026-03-09 19:49:30] 2026-03-09 18:48:45,676 | INFO     | preparing for final server update for job 7047226080 in state='finished'
[2026-03-09 19:49:30] 2026-03-09 18:48:45,676 | INFO     | reading metadata from: /var/lib/boinc/var/slot20/slots/7/PanDA_Pilot-7047226080/jobReport.json
[2026-03-09 19:49:30] 2026-03-09 18:48:45,678 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot20/slots/7/workernode_map.json
[2026-03-09 19:49:30] 2026-03-09 18:48:45,678 | INFO     | this job has now completed (state=finished)
[2026-03-09 19:49:30] 2026-03-09 18:48:45,678 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 19:49:30] 2026-03-09 18:48:45,678 | INFO     | log transfer has been attempted: DONE
[2026-03-09 19:49:30] 2026-03-09 18:48:45,678 | INFO     | job 7047226080 has finished - writing final server update
[2026-03-09 19:49:30] 2026-03-09 18:48:45,678 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3464329/.job.ad'
[2026-03-09 19:49:30] 2026-03-09 18:48:45,678 | INFO     | total number of processed events: 400 (read)
[2026-03-09 19:49:30] 2026-03-09 18:48:45,696 | INFO     | using path: /var/lib/boinc/var/slot20/slots/7/PanDA_Pilot-7047226080/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 19:49:30] 2026-03-09 18:48:45,696 | INFO     | extracted standard info from prmon json
[2026-03-09 19:49:30] 2026-03-09 18:48:45,696 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 19:49:30] 2026-03-09 18:48:45,696 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 19:49:30] 2026-03-09 18:48:45,696 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 19:49:30] 2026-03-09 18:48:45,696 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 19:49:30] 2026-03-09 18:48:45,698 | INFO     | fitting pss+swap vs Time
[2026-03-09 19:49:30] 2026-03-09 18:48:45,698 | INFO     | sum of square deviations: 233641590.0
[2026-03-09 19:49:30] 2026-03-09 18:48:45,698 | INFO     | sum of deviations: 1333669596.0000002
[2026-03-09 19:49:30] 2026-03-09 18:48:45,698 | INFO     | mean x: 1773079226.0
[2026-03-09 19:49:30] 2026-03-09 18:48:45,698 | INFO     | mean y: 2342852.978021978
[2026-03-09 19:49:30] 2026-03-09 18:48:45,698 | INFO     | intersect: -10118722728.77655
[2026-03-09 19:49:30] 2026-03-09 18:48:45,698 | INFO     | chi2: 0.0012128452704232306
[2026-03-09 19:49:30] 2026-03-09 18:48:45,698 | INFO     | current memory leak: 5.71 B/s (using 91 data points, chi2=0.00)
[2026-03-09 19:49:30] 2026-03-09 18:48:45,698 | INFO     | could have reported an average CPU frequency of 3577 MHz (7 samples)
[2026-03-09 19:49:30] 2026-03-09 18:48:45,699 | INFO     | ..............................
[2026-03-09 19:49:30] 2026-03-09 18:48:45,699 | INFO     | . Timing measurements:
[2026-03-09 19:49:30] 2026-03-09 18:48:45,699 | INFO     | . get job = 0 s
[2026-03-09 19:49:30] 2026-03-09 18:48:45,699 | INFO     | . initial setup = 5 s
[2026-03-09 19:49:30] 2026-03-09 18:48:45,699 | INFO     | . payload setup = 5 s
[2026-03-09 19:49:30] 2026-03-09 18:48:45,699 | INFO     | . stage-in = 0 s
[2026-03-09 19:49:30] 2026-03-09 18:48:45,699 | INFO     | . payload execution = 5947 s
[2026-03-09 19:49:30] 2026-03-09 18:48:45,699 | INFO     | . stage-out = 0 s
[2026-03-09 19:49:30] 2026-03-09 18:48:45,699 | INFO     | . log creation = 0 s
[2026-03-09 19:49:30] 2026-03-09 18:48:45,699 | INFO     | ..............................
[2026-03-09 19:49:30] 2026-03-09 18:48:45,745 | INFO     | 
[2026-03-09 19:49:30] 2026-03-09 18:48:45,745 | INFO     | job summary report
[2026-03-09 19:49:30] 2026-03-09 18:48:45,745 | INFO     | --------------------------------------------------
[2026-03-09 19:49:30] 2026-03-09 18:48:45,745 | INFO     | PanDA job id: 7047226080
[2026-03-09 19:49:30] 2026-03-09 18:48:45,745 | INFO     | task id: 48998022
[2026-03-09 19:49:30] 2026-03-09 18:48:45,745 | INFO     | errors: (none)
[2026-03-09 19:49:30] 2026-03-09 18:48:45,745 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 19:49:30] 2026-03-09 18:48:45,746 | INFO     | pilot state: finished 
[2026-03-09 19:49:30] 2026-03-09 18:48:45,746 | INFO     | transexitcode: 0
[2026-03-09 19:49:30] 2026-03-09 18:48:45,746 | INFO     | exeerrorcode: 0
[2026-03-09 19:49:30] 2026-03-09 18:48:45,746 | INFO     | exeerrordiag: 
[2026-03-09 19:49:30] 2026-03-09 18:48:45,746 | INFO     | exitcode: 0
[2026-03-09 19:49:30] 2026-03-09 18:48:45,746 | INFO     | exitmsg: OK
[2026-03-09 19:49:30] 2026-03-09 18:48:45,746 | INFO     | cpuconsumptiontime: 22895 s
[2026-03-09 19:49:30] 2026-03-09 18:48:45,746 | INFO     | nevents: 400
[2026-03-09 19:49:30] 2026-03-09 18:48:45,746 | INFO     | neventsw: 0
[2026-03-09 19:49:30] 2026-03-09 18:48:45,746 | INFO     | pid: 530488
[2026-03-09 19:49:30] 2026-03-09 18:48:45,746 | INFO     | pgrp: 530488
[2026-03-09 19:49:30] 2026-03-09 18:48:45,746 | INFO     | corecount: 4
[2026-03-09 19:49:30] 2026-03-09 18:48:45,746 | INFO     | event service: False
[2026-03-09 19:49:30] 2026-03-09 18:48:45,746 | INFO     | sizes: {0: 2279865, 1: 2280326, 11: 2280326, 5956: 2316127, 5957: 2316127, 5959: 2316321}
[2026-03-09 19:49:30] 2026-03-09 18:48:45,746 | INFO     | --------------------------------------------------
[2026-03-09 19:49:30] 2026-03-09 18:48:45,746 | INFO     | 
[2026-03-09 19:49:30] 2026-03-09 18:48:45,746 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot20/slots/7
[2026-03-09 19:49:30] 2026-03-09 18:48:45,764 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 19:49:30] 2026-03-09 18:48:45,764 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 19:49:30] 2026-03-09 18:48:45,764 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 19:49:30] 2026-03-09 18:48:45,764 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 19:49:30] 2026-03-09 18:48:45,764 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 19:49:30] 2026-03-09 18:48:45,764 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 19:49:30] 2026-03-09 18:48:45,764 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 19:49:30] 2026-03-09 18:48:45,764 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 19:49:30] 2026-03-09 18:48:45,764 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 19:49:30] 2026-03-09 18:48:45,765 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 19:49:30] 2026-03-09 18:48:45,765 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 19:49:30] 2026-03-09 18:48:45,765 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 19:49:30] 2026-03-09 18:48:45,765 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 19:49:30] 2026-03-09 18:48:45,765 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 19:49:30] 2026-03-09 18:48:45,765 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 19:49:30] 2026-03-09 18:48:45,765 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 19:49:30] 2026-03-09 18:48:45,765 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 19:49:30] 2026-03-09 18:48:45,765 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 19:49:30] 2026-03-09 18:48:45,765 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 19:49:30] 2026-03-09 18:48:45,765 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 19:49:30] 2026-03-09 18:48:45,765 | INFO     | job 7047226080 has completed (purged errors)
[2026-03-09 19:49:30] 2026-03-09 18:48:45,765 | INFO     | overall cleanup function is called
[2026-03-09 19:49:30] 2026-03-09 18:48:46,772 | INFO     | --- collectZombieJob: --- 10, [530488]
[2026-03-09 19:49:30] 2026-03-09 18:48:46,772 | INFO     | zombie collector waiting for pid 530488
[2026-03-09 19:49:30] 2026-03-09 18:48:46,772 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 19:49:30] 2026-03-09 18:48:46,772 | INFO     | collected zombie processes
[2026-03-09 19:49:30] 2026-03-09 18:48:46,772 | INFO     | will attempt to kill all subprocesses of pid=530488
[2026-03-09 19:49:30] 2026-03-09 18:48:47,219 | INFO     | process IDs to be killed: [530488] (in reverse order)
[2026-03-09 19:49:30] 2026-03-09 18:48:47,429 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 19:49:30] 2026-03-09 18:48:47,429 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 19:49:30] 2026-03-09 18:48:47,454 | INFO     | did not find any defunct processes belonging to 530488
[2026-03-09 19:49:30] 2026-03-09 18:48:47,476 | INFO     | did not find any defunct processes belonging to 530488
[2026-03-09 19:49:30] 2026-03-09 18:48:47,477 | INFO     | ready for new job
[2026-03-09 19:49:30] 2026-03-09 18:48:47,477 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 19:49:30] 2026-03-09 18:48:47,478 | INFO     | **************************************
[2026-03-09 19:49:30] 2026-03-09 18:48:47,478 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 19:49:30] 2026-03-09 18:48:47,478 | INFO     | **************************************
[2026-03-09 19:49:30] 2026-03-09 18:48:47,478 | INFO     | 
[2026-03-09 19:49:30] 2026-03-09 18:48:47,483 | INFO     | architecture information:
[2026-03-09 19:49:30] 2026-03-09 18:48:47,483 | INFO     | executing command: cat /etc/os-release
[2026-03-09 19:49:30] 2026-03-09 18:48:47,497 | INFO     | cat /etc/os-release:
[2026-03-09 19:49:30] NAME="CentOS Linux"
[2026-03-09 19:49:30] VERSION="7 (Core)"
[2026-03-09 19:49:30] ID="centos"
[2026-03-09 19:49:30] ID_LIKE="rhel fedora"
[2026-03-09 19:49:30] VERSION_ID="7"
[2026-03-09 19:49:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 19:49:30] ANSI_COLOR="0;31"
[2026-03-09 19:49:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 19:49:30] HOME_URL="https://www.centos.org/"
[2026-03-09 19:49:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 19:49:30] 
[2026-03-09 19:49:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 19:49:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 19:49:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 19:49:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 19:49:30] 
[2026-03-09 19:49:30] 2026-03-09 18:48:47,497 | INFO     | **************************************
[2026-03-09 19:49:30] 2026-03-09 18:48:47,999 | INFO     | executing command: df -mP /var/lib/boinc/var/slot20/slots/7
[2026-03-09 19:49:30] 2026-03-09 18:48:48,010 | INFO     | sufficient remaining disk space (20944257024 B)
[2026-03-09 19:49:30] 2026-03-09 18:48:48,010 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 19:49:30] 2026-03-09 18:48:48,010 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 19:49:30] 2026-03-09 18:48:48,010 | INFO     | update_server=False
[2026-03-09 19:49:30] 2026-03-09 18:48:48,010 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 19:49:30] 2026-03-09 18:48:48,011 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 19:49:30] 2026-03-09 18:48:48,011 | INFO     | aborting loop
[2026-03-09 19:49:30] 2026-03-09 18:48:48,276 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 19:49:30] 2026-03-09 18:48:48,302 | INFO     | all payload control threads have been joined
[2026-03-09 19:49:30] 2026-03-09 18:48:48,909 | INFO     | all job control threads have been joined
[2026-03-09 19:49:30] 2026-03-09 18:48:49,015 | INFO     | [job] retrieve thread has finished
[2026-03-09 19:49:30] 2026-03-09 18:48:49,016 | INFO     | [job] job monitor thread has finished
[2026-03-09 19:49:30] 2026-03-09 18:48:49,110 | INFO     | all data control threads have been joined
[2026-03-09 19:49:30] 2026-03-09 18:48:49,214 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 19:49:30] 2026-03-09 18:48:49,308 | INFO     | [payload] control thread has finished
[2026-03-09 19:49:30] 2026-03-09 18:48:49,467 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 19:49:30] 2026-03-09 18:48:49,493 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 19:49:30] 2026-03-09 18:48:49,514 | INFO     | [job] validate thread has finished
[2026-03-09 19:49:30] 2026-03-09 18:48:49,651 | INFO     | [payload] validate_post thread has finished
[2026-03-09 19:49:30] 2026-03-09 18:48:49,876 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 19:49:30] 2026-03-09 18:48:49,914 | INFO     | [job] control thread has finished
[2026-03-09 19:49:30] 2026-03-09 18:48:50,116 | INFO     | [data] control thread has finished
[2026-03-09 19:49:30] 2026-03-09 18:48:50,282 | INFO     | [data] copytool_out thread has finished
[2026-03-09 19:49:30] 2026-03-09 18:48:50,323 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 19:49:30] 2026-03-09 18:48:50,433 | INFO     | [data] copytool_in thread has finished
[2026-03-09 19:49:30] 2026-03-09 18:48:50,451 | INFO     | [payload] failed_post thread has finished
[2026-03-09 19:49:30] 2026-03-09 18:48:50,752 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 19:49:30] 2026-03-09 18:48:51,760 | INFO     | [job] queue monitor thread has finished
[2026-03-09 19:49:30] 2026-03-09 18:48:53,477 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 19:49:30] 2026-03-09 18:49:18,176 | INFO     | PID=517561 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-09 19:49:30] 2026-03-09 18:49:18,176 | INFO     | .. there are 58 such processes running
[2026-03-09 19:49:30] 2026-03-09 18:49:18,177 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 19:49:30] 2026-03-09 18:49:18,177 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 19:49:30] 2026-03-09 18:49:18,177 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 19:49:30] 2026-03-09 18:49:24,645 | INFO     | [monitor] cgroup control has ended
[2026-03-09 19:49:30] 2026-03-09 18:49:24,768 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22652546832192)>', '<ExcThread(monitor, started 22652306859776)>']
[2026-03-09 19:49:30] 2026-03-09 18:49:25,211 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 19:49:30] 2026-03-09 18:49:25,211 | INFO     | [monitor] control thread has ended
[2026-03-09 19:49:30] 2026-03-09 18:49:29,794 | INFO     | all workflow threads have been joined
[2026-03-09 19:49:30] 2026-03-09 18:49:29,794 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 19:49:30] 2026-03-09 18:49:29,794 | INFO     | traces error code: 0
[2026-03-09 19:49:30] 2026-03-09 18:49:29,794 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 19:49:30] 2026-03-09 18:49:29,912 [wrapper] ==== pilot stdout END ====
[2026-03-09 19:49:30] 2026-03-09 18:49:29,915 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 19:49:30] 2026-03-09 18:49:29,917 [wrapper] pilotpid: 517561
[2026-03-09 19:49:30] 2026-03-09 18:49:29,920 [wrapper] Pilot exit status: 0
[2026-03-09 19:49:30] 2026-03-09 18:49:29,929 [wrapper] pandaids: 7047226080
[2026-03-09 19:49:30] 2026-03-09 18:49:30,042 [wrapper] cleanup supervisor_pilot 1650750 517563
[2026-03-09 19:49:30] 2026-03-09 18:49:30,045 [wrapper] Test setup, not cleaning
[2026-03-09 19:49:30] 2026-03-09 18:49:30,047 [wrapper] apfmon messages muted
[2026-03-09 19:49:30] 2026-03-09 18:49:30,049 [wrapper] ==== wrapper stdout END ====
[2026-03-09 19:49:30] 2026-03-09 18:49:30,051 [wrapper] ==== wrapper stderr END ====
[2026-03-09 19:49:30]  *** Error codes and diagnostics ***
[2026-03-09 19:49:30]     "exeErrorCode": 0,
[2026-03-09 19:49:30]     "exeErrorDiag": "",
[2026-03-09 19:49:30]     "pilotErrorCode": 0,
[2026-03-09 19:49:30]     "pilotErrorDiag": "",
[2026-03-09 19:49:30]  *** Listing of results directory ***
[2026-03-09 19:49:30] total 555792
[2026-03-09 19:49:30] -rw-r--r--. 1 boinc boinc    584627 Mar  9 12:47 pilot3.tar.gz
[2026-03-09 19:49:30] -rwx------. 1 boinc boinc     36322 Mar  9 12:50 runpilot2-wrapper.sh
[2026-03-09 19:49:30] -rw-r--r--. 1 boinc boinc      5111 Mar  9 12:51 queuedata.json
[2026-03-09 19:49:30] -rw-r--r--. 1 boinc boinc       100 Mar  9 18:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 19:49:30] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 18:08 run_atlas
[2026-03-09 19:49:30] -rw-r--r--. 1 boinc boinc       105 Mar  9 18:08 job.xml
[2026-03-09 19:49:30] -rw-r--r--. 1 boinc boinc      6703 Mar  9 18:09 init_data.xml
[2026-03-09 19:49:30] -rw-r--r--. 2 boinc boinc 322050407 Mar  9 18:09 EVNT.48998020._000059.pool.root.1
[2026-03-09 19:49:30] -rw-r--r--. 2 boinc boinc     15845 Mar  9 18:09 start_atlas.sh
[2026-03-09 19:49:30] drwxrwx--x. 2 boinc boinc      4096 Mar  9 18:09 shared
[2026-03-09 19:49:30] -rw-r--r--. 2 boinc boinc    597964 Mar  9 18:09 input.tar.gz
[2026-03-09 19:49:30] -rw-r--r--. 1 boinc boinc         0 Mar  9 18:09 boinc_lockfile
[2026-03-09 19:49:30] -rw-r--r--. 1 boinc boinc      2611 Mar  9 18:09 pandaJob.out
[2026-03-09 19:49:30] -rw-------. 1 boinc boinc   1002608 Mar  9 18:09 agis_schedconf.cvmfs.json
[2026-03-09 19:49:30] -rw-------. 1 boinc boinc   1511578 Mar  9 18:09 agis_ddmendpoints.agis.ALL.json
[2026-03-09 19:49:30] -rw-------. 1 boinc boinc       436 Mar  9 18:09 workernode_map.json
[2026-03-09 19:49:30] drwx------. 5 boinc boinc      4096 Mar  9 18:09 pilot3
[2026-03-09 19:49:30] -rw-------. 1 boinc boinc 240864921 Mar  9 19:48 HITS.48998022._001532.pool.root.1
[2026-03-09 19:49:30] -rw-r--r--. 1 boinc boinc       530 Mar  9 19:48 boinc_task_state.xml
[2026-03-09 19:49:30] -rw-------. 1 boinc boinc        95 Mar  9 19:48 pilot_heartbeat.json
[2026-03-09 19:49:30] -rw-------. 1 boinc boinc      1029 Mar  9 19:48 memory_monitor_summary.json
[2026-03-09 19:49:30] -rw-------. 1 boinc boinc    274552 Mar  9 19:48 log.48998022._001532.job.log.tgz.1
[2026-03-09 19:49:30] -rw-------. 1 boinc boinc      6340 Mar  9 19:48 heartbeat.json
[2026-03-09 19:49:30] -rw-------. 1 boinc boinc      4828 Mar  9 19:49 pilotlog.txt
[2026-03-09 19:49:30] -rw-r--r--. 1 boinc boinc      8192 Mar  9 19:49 boinc_mmap_file
[2026-03-09 19:49:30] -rw-------. 1 boinc boinc    865273 Mar  9 19:49 log.48998022._001532.job.log.1
[2026-03-09 19:49:30] -rw-r--r--. 1 boinc boinc        27 Mar  9 19:49 wrapper_checkpoint.txt
[2026-03-09 19:49:30] -rw-------. 1 boinc boinc       357 Mar  9 19:49 output.list
[2026-03-09 19:49:30] -rw-r--r--. 1 boinc boinc       620 Mar  9 19:49 runtime_log
[2026-03-09 19:49:30] -rw-------. 1 boinc boinc   1157120 Mar  9 19:49 result.tar.gz
[2026-03-09 19:49:30] -rw-r--r--. 1 boinc boinc      9204 Mar  9 19:49 runtime_log.err
[2026-03-09 19:49:30] -rw-------. 1 boinc boinc       662 Mar  9 19:49 YE5KDmQJoJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmfNcLDmbnUvWn.diag
[2026-03-09 19:49:30] -rw-r--r--. 1 boinc boinc     21077 Mar  9 19:49 stderr.txt
[2026-03-09 19:49:30] HITS file was successfully produced:
[2026-03-09 19:49:30] -rw-------. 1 boinc boinc 240864921 Mar  9 19:48 shared/HITS.pool.root.1
[2026-03-09 19:49:30]  *** Contents of shared directory: ***
[2026-03-09 19:49:30] total 551464
[2026-03-09 19:49:30] -rw-r--r--. 2 boinc boinc 322050407 Mar  9 18:09 ATLAS.root_0
[2026-03-09 19:49:30] -rw-r--r--. 2 boinc boinc     15845 Mar  9 18:09 start_atlas.sh
[2026-03-09 19:49:30] -rw-r--r--. 2 boinc boinc    597964 Mar  9 18:09 input.tar.gz
[2026-03-09 19:49:30] -rw-------. 1 boinc boinc 240864921 Mar  9 19:48 HITS.pool.root.1
[2026-03-09 19:49:30] -rw-------. 1 boinc boinc   1157120 Mar  9 19:49 result.tar.gz
19:49:32 (511587): run_atlas exited; CPU time 23137.159058
19:49:32 (511587): called boinc_finish(0)

</stderr_txt>
]]>

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