Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:45:19 (1526896): wrapper (7.7.26015): starting
07:45:19 (1526896): wrapper: running run_atlas (--nthreads 8)
[2026-03-09 07:45:19] Arguments: --nthreads 8
[2026-03-09 07:45:19] Threads: 8
[2026-03-09 07:45:19] Checking for CVMFS
[2026-03-09 07:45:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 07:45:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 07:45:20] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 07:45:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 07:45:20] 2.13.3.0 8759 106297 198012 157075 1 531 37312420 40960001 41588 16776704 0 895451932 99.690 707172061 43897 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-09 07:45:20] CVMFS is ok
[2026-03-09 07:45:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 07:45:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 07:45:20] Further information can be found at the LHC@home message board.
[2026-03-09 07:45:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 07:45:20] Checking for apptainer binary...
[2026-03-09 07:45:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 07:45:20] Running /usr/bin/apptainer --version
[2026-03-09 07:45:20] apptainer version 1.4.5-2.el9
[2026-03-09 07:45:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 07:45:21] c-208-39.aglt2.org
[2026-03-09 07:45:21] apptainer works
[2026-03-09 07:45:21] Set ATHENA_PROC_NUMBER=8
[2026-03-09 07:45:21] Set ATHENA_CORE_NUMBER=8
[2026-03-09 07:45:21] Starting ATLAS job with PandaID=7034564621
[2026-03-09 07:45:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 09:05:27]  *** The last 200 lines of the pilot log: ***
[2026-03-09 09:05:27]  status_code=0
[2026-03-09 09:05:27]  storage_token=
[2026-03-09 09:05:27]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-7034564621/log.48700930._000942.job.log.tgz.1
[2026-03-09 09:05:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/67/42/log.48700930._000942.job.log.tgz.1
[2026-03-09 09:05:27]  workdir=None
[2026-03-09 09:05:27] ]
[2026-03-09 09:05:27] 2026-03-09 13:04:19,392 | INFO     | time since job start (4627s) is within the limit (349056.0s)
[2026-03-09 09:05:27] 2026-03-09 13:04:19,429 | INFO     | transferring file log.48700930._000942.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-7034564621/log.48700930._000942.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-09 09:05:27] 2026-03-09 13:04:19,429 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-7034564621/log.48700930._000942.job.log.tgz.1 /tmp/boinchome/slots/2/log.48700930._000942.job
[2026-03-09 09:05:27] 2026-03-09 13:04:19,490 | INFO     | adding to output.list: log.48700930._000942.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/67/42/log.48700930._000942.job.log.tg
[2026-03-09 09:05:27] 2026-03-09 13:04:19,491 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-09 09:05:27] 2026-03-09 13:04:19,491 | INFO     | summary of transferred files:
[2026-03-09 09:05:27] 2026-03-09 13:04:19,491 | INFO     |  -- lfn=log.48700930._000942.job.log.tgz.1, status_code=0, status=transferred
[2026-03-09 09:05:27] 2026-03-09 13:04:19,491 | INFO     | stage-out finished correctly
[2026-03-09 09:05:27] 2026-03-09 13:04:19,722 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-09 09:05:27] 2026-03-09 13:04:20,296 | WARNING  | process 1543701 can no longer be monitored (due to stat problems) - aborting
[2026-03-09 09:05:27] 2026-03-09 13:04:20,296 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7034564621/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 09:05:27] 2026-03-09 13:04:20,311 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3135178 B
[2026-03-09 09:05:27] 2026-03-09 13:04:20,311 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15343 B
[2026-03-09 09:05:27] 2026-03-09 13:04:20,311 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-09 09:05:27] 2026-03-09 13:04:20,344 | INFO     | sufficient remaining disk space (167659962368 B)
[2026-03-09 09:05:27] 2026-03-09 13:04:20,345 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-03-09 09:05:27] 2026-03-09 13:04:20,346 | INFO     | size of work directory /tmp/boinchome/slots/2/PanDA_Pilot-7034564621: 3432745 B (within 5033164800 B limit)
[2026-03-09 09:05:27] 2026-03-09 13:04:20,346 | INFO     | pfn file=/tmp/boinchome/slots/2/PanDA_Pilot-7034564621/HITS.48700930._000942.pool.root.1 does not exist (skip from workdir size calculation)
[2026-03-09 09:05:27] 2026-03-09 13:04:20,346 | INFO     | total size of present files: 0 B (workdir size: 3432745 B)
[2026-03-09 09:05:27] 2026-03-09 13:04:20,346 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/2/PanDA_Pilot-7034564621/HITS.48700930._000942.pool.root.1 since it does not exist
[2026-03-09 09:05:27] 2026-03-09 13:04:21,399 | INFO     | time since job start (4629s) is within the limit (349056.0s)
[2026-03-09 09:05:27] 2026-03-09 13:04:21,474 | INFO     | number of running child processes to parent process 1543701: 1
[2026-03-09 09:05:27] 2026-03-09 13:04:21,475 | INFO     | maximum number of monitored processes: 7
[2026-03-09 09:05:27] 2026-03-09 13:04:22,967 | INFO     | job 7034564621 has state=finished
[2026-03-09 09:05:27] 2026-03-09 13:04:22,967 | INFO     | preparing for final server update for job 7034564621 in state='finished'
[2026-03-09 09:05:27] 2026-03-09 13:04:22,968 | INFO     | reading metadata from: /tmp/boinchome/slots/2/PanDA_Pilot-7034564621/jobReport.json
[2026-03-09 09:05:27] 2026-03-09 13:04:22,970 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-03-09 09:05:27] 2026-03-09 13:04:22,971 | INFO     | this job has now completed (state=finished)
[2026-03-09 09:05:27] 2026-03-09 13:04:22,971 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 09:05:27] 2026-03-09 13:04:22,971 | INFO     | log transfer has been attempted: DONE
[2026-03-09 09:05:27] 2026-03-09 13:04:22,971 | INFO     | job 7034564621 has finished - writing final server update
[2026-03-09 09:05:27] 2026-03-09 13:04:22,971 | INFO     | total number of processed events: 400 (read)
[2026-03-09 09:05:27] 2026-03-09 13:04:23,039 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7034564621/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 09:05:27] 2026-03-09 13:04:23,040 | INFO     | extracted standard info from prmon json
[2026-03-09 09:05:27] 2026-03-09 13:04:23,040 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 09:05:27] 2026-03-09 13:04:23,040 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 09:05:27] 2026-03-09 13:04:23,047 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 09:05:27] 2026-03-09 13:04:23,047 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 09:05:27] 2026-03-09 13:04:23,048 | INFO     | fitting pss+swap vs Time
[2026-03-09 09:05:27] 2026-03-09 13:04:23,049 | INFO     | sum of square deviations: 97481478.94117667
[2026-03-09 09:05:27] 2026-03-09 13:04:23,049 | INFO     | sum of deviations: -1178847899.4705882
[2026-03-09 09:05:27] 2026-03-09 13:04:23,049 | INFO     | mean x: 1773059273.5294118
[2026-03-09 09:05:27] 2026-03-09 13:04:23,049 | INFO     | mean y: 2512617.7352941176
[2026-03-09 09:05:27] 2026-03-09 13:04:23,049 | INFO     | intersect: 21444197981.35463
[2026-03-09 09:05:27] 2026-03-09 13:04:23,049 | INFO     | chi2: 0.13388003906007967
[2026-03-09 09:05:27] 2026-03-09 13:04:23,049 | INFO     | current memory leak: -12.09 B/s (using 68 data points, chi2=0.13)
[2026-03-09 09:05:27] 2026-03-09 13:04:23,049 | INFO     | could have reported an average CPU frequency of 3800 MHz (6 samples)
[2026-03-09 09:05:27] 2026-03-09 13:04:23,049 | INFO     | ..............................
[2026-03-09 09:05:27] 2026-03-09 13:04:23,049 | INFO     | . Timing measurements:
[2026-03-09 09:05:27] 2026-03-09 13:04:23,049 | INFO     | . get job = 0 s
[2026-03-09 09:05:27] 2026-03-09 13:04:23,049 | INFO     | . initial setup = 41 s
[2026-03-09 09:05:27] 2026-03-09 13:04:23,049 | INFO     | . payload setup = 50 s
[2026-03-09 09:05:27] 2026-03-09 13:04:23,049 | INFO     | . stage-in = 0 s
[2026-03-09 09:05:27] 2026-03-09 13:04:23,050 | INFO     | . payload execution = 4558 s
[2026-03-09 09:05:27] 2026-03-09 13:04:23,050 | INFO     | . stage-out = 1 s
[2026-03-09 09:05:27] 2026-03-09 13:04:23,050 | INFO     | . log creation = 0 s
[2026-03-09 09:05:27] 2026-03-09 13:04:23,050 | INFO     | ..............................
[2026-03-09 09:05:27] 2026-03-09 13:04:23,292 | INFO     | 
[2026-03-09 09:05:27] 2026-03-09 13:04:23,292 | INFO     | job summary report
[2026-03-09 09:05:27] 2026-03-09 13:04:23,292 | INFO     | --------------------------------------------------
[2026-03-09 09:05:27] 2026-03-09 13:04:23,292 | INFO     | PanDA job id: 7034564621
[2026-03-09 09:05:27] 2026-03-09 13:04:23,292 | INFO     | task id: 48700930
[2026-03-09 09:05:27] 2026-03-09 13:04:23,292 | INFO     | errors: (none)
[2026-03-09 09:05:27] 2026-03-09 13:04:23,292 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 09:05:27] 2026-03-09 13:04:23,293 | INFO     | pilot state: finished 
[2026-03-09 09:05:27] 2026-03-09 13:04:23,293 | INFO     | transexitcode: 0
[2026-03-09 09:05:27] 2026-03-09 13:04:23,293 | INFO     | exeerrorcode: 0
[2026-03-09 09:05:27] 2026-03-09 13:04:23,293 | INFO     | exeerrordiag: 
[2026-03-09 09:05:27] 2026-03-09 13:04:23,293 | INFO     | exitcode: 0
[2026-03-09 09:05:27] 2026-03-09 13:04:23,293 | INFO     | exitmsg: OK
[2026-03-09 09:05:27] 2026-03-09 13:04:23,293 | INFO     | cpuconsumptiontime: 17532 s
[2026-03-09 09:05:27] 2026-03-09 13:04:23,293 | INFO     | nevents: 400
[2026-03-09 09:05:27] 2026-03-09 13:04:23,293 | INFO     | neventsw: 0
[2026-03-09 09:05:27] 2026-03-09 13:04:23,293 | INFO     | pid: 1543701
[2026-03-09 09:05:27] 2026-03-09 13:04:23,293 | INFO     | pgrp: 1543701
[2026-03-09 09:05:27] 2026-03-09 13:04:23,293 | INFO     | corecount: 8
[2026-03-09 09:05:27] 2026-03-09 13:04:23,293 | INFO     | event service: False
[2026-03-09 09:05:27] 2026-03-09 13:04:23,293 | INFO     | sizes: {0: 2279737, 1: 2280138, 2: 2280198, 12: 2280226, 4613: 2306329, 4615: 2315511, 4619: 2315677}
[2026-03-09 09:05:27] 2026-03-09 13:04:23,293 | INFO     | --------------------------------------------------
[2026-03-09 09:05:27] 2026-03-09 13:04:23,293 | INFO     | 
[2026-03-09 09:05:27] 2026-03-09 13:04:23,293 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-09 09:05:27] 2026-03-09 13:04:23,406 | INFO     | time since job start (4631s) is within the limit (349056.0s)
[2026-03-09 09:05:27] 2026-03-09 13:04:23,432 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 09:05:27] 2026-03-09 13:04:23,432 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 09:05:27] 2026-03-09 13:04:23,432 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 09:05:27] 2026-03-09 13:04:23,432 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 09:05:27] 2026-03-09 13:04:23,432 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 09:05:27] 2026-03-09 13:04:23,432 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 09:05:27] 2026-03-09 13:04:23,432 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 09:05:27] 2026-03-09 13:04:23,432 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 09:05:27] 2026-03-09 13:04:23,432 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 09:05:27] 2026-03-09 13:04:23,432 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 09:05:27] 2026-03-09 13:04:23,432 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 09:05:27] 2026-03-09 13:04:23,432 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 09:05:27] 2026-03-09 13:04:23,432 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 09:05:27] 2026-03-09 13:04:23,432 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 09:05:27] 2026-03-09 13:04:23,432 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 09:05:27] 2026-03-09 13:04:23,432 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 09:05:27] 2026-03-09 13:04:23,432 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 09:05:27] 2026-03-09 13:04:23,432 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 09:05:27] 2026-03-09 13:04:23,432 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 09:05:27] 2026-03-09 13:04:23,433 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 09:05:27] 2026-03-09 13:04:23,433 | INFO     | job 7034564621 has completed (purged errors)
[2026-03-09 09:05:27] 2026-03-09 13:04:23,433 | INFO     | overall cleanup function is called
[2026-03-09 09:05:27] 2026-03-09 13:04:24,440 | INFO     | --- collectZombieJob: --- 10, [1543701]
[2026-03-09 09:05:27] 2026-03-09 13:04:24,442 | INFO     | zombie collector waiting for pid 1543701
[2026-03-09 09:05:27] 2026-03-09 13:04:24,442 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 09:05:27] 2026-03-09 13:04:24,442 | INFO     | collected zombie processes
[2026-03-09 09:05:27] 2026-03-09 13:04:24,442 | INFO     | will attempt to kill all subprocesses of pid=1543701
[2026-03-09 09:05:27] 2026-03-09 13:04:25,513 | INFO     | process IDs to be killed: [1543701] (in reverse order)
[2026-03-09 09:05:27] 2026-03-09 13:04:25,733 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 09:05:27] 2026-03-09 13:04:25,734 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 09:05:27] 2026-03-09 13:04:25,853 | INFO     | did not find any defunct processes belonging to 1543701
[2026-03-09 09:05:27] 2026-03-09 13:04:26,029 | INFO     | did not find any defunct processes belonging to 1543701
[2026-03-09 09:05:27] 2026-03-09 13:04:26,062 | INFO     | ready for new job
[2026-03-09 09:05:27] 2026-03-09 13:04:26,062 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 09:05:27] 2026-03-09 13:04:26,064 | INFO     | **************************************
[2026-03-09 09:05:27] 2026-03-09 13:04:26,087 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 09:05:27] 2026-03-09 13:04:26,087 | INFO     | **************************************
[2026-03-09 09:05:27] 2026-03-09 13:04:26,087 | INFO     | 
[2026-03-09 09:05:27] 2026-03-09 13:04:26,097 | INFO     | architecture information:
[2026-03-09 09:05:27] 2026-03-09 13:04:26,101 | INFO     | executing command: cat /etc/os-release
[2026-03-09 09:05:27] 2026-03-09 13:04:26,142 | INFO     | cat /etc/os-release:
[2026-03-09 09:05:27] NAME="CentOS Linux"
[2026-03-09 09:05:27] VERSION="7 (Core)"
[2026-03-09 09:05:27] ID="centos"
[2026-03-09 09:05:27] ID_LIKE="rhel fedora"
[2026-03-09 09:05:27] VERSION_ID="7"
[2026-03-09 09:05:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 09:05:27] ANSI_COLOR="0;31"
[2026-03-09 09:05:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 09:05:27] HOME_URL="https://www.centos.org/"
[2026-03-09 09:05:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 09:05:27] 
[2026-03-09 09:05:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 09:05:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 09:05:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 09:05:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 09:05:27] 
[2026-03-09 09:05:27] 2026-03-09 13:04:26,142 | INFO     | **************************************
[2026-03-09 09:05:27] 2026-03-09 13:04:26,645 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-09 09:05:27] 2026-03-09 13:04:26,791 | INFO     | sufficient remaining disk space (167661010944 B)
[2026-03-09 09:05:27] 2026-03-09 13:04:26,792 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 09:05:27] 2026-03-09 13:04:26,792 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 09:05:27] 2026-03-09 13:04:26,792 | INFO     | update_server=False
[2026-03-09 09:05:27] 2026-03-09 13:04:26,792 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 09:05:27] 2026-03-09 13:04:26,793 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 09:05:27] 2026-03-09 13:04:26,999 | INFO     | all payload control threads have been joined
[2026-03-09 09:05:27] 2026-03-09 13:04:27,578 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 09:05:27] 2026-03-09 13:04:27,578 | INFO     | aborting loop
[2026-03-09 09:05:27] 2026-03-09 13:04:27,763 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 09:05:27] 2026-03-09 13:04:27,799 | INFO     | [job] retrieve thread has finished
[2026-03-09 09:05:27] 2026-03-09 13:04:27,804 | INFO     | [data] copytool_in thread has finished
[2026-03-09 09:05:27] 2026-03-09 13:04:27,805 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 09:05:27] 2026-03-09 13:04:27,836 | INFO     | all data control threads have been joined
[2026-03-09 09:05:27] 2026-03-09 13:04:27,875 | INFO     | all job control threads have been joined
[2026-03-09 09:05:27] 2026-03-09 13:04:27,942 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 09:05:27] 2026-03-09 13:04:28,014 | INFO     | [payload] control thread has finished
[2026-03-09 09:05:27] 2026-03-09 13:04:28,299 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 09:05:27] 2026-03-09 13:04:28,415 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 09:05:27] 2026-03-09 13:04:28,431 | INFO     | [job] validate thread has finished
[2026-03-09 09:05:27] 2026-03-09 13:04:28,584 | INFO     | [job] job monitor thread has finished
[2026-03-09 09:05:27] 2026-03-09 13:04:28,690 | INFO     | [payload] validate_post thread has finished
[2026-03-09 09:05:27] 2026-03-09 13:04:28,842 | INFO     | [data] control thread has finished
[2026-03-09 09:05:27] 2026-03-09 13:04:28,881 | INFO     | [job] control thread has finished
[2026-03-09 09:05:27] 2026-03-09 13:04:29,307 | INFO     | [job] queue monitor thread has finished
[2026-03-09 09:05:27] 2026-03-09 13:04:29,371 | INFO     | [payload] failed_post thread has finished
[2026-03-09 09:05:27] 2026-03-09 13:04:29,770 | INFO     | [data] copytool_out thread has finished
[2026-03-09 09:05:27] 2026-03-09 13:04:30,816 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 09:05:27] 2026-03-09 13:04:37,119 | INFO     | job.realtimelogging is not enabled
[2026-03-09 09:05:27] 2026-03-09 13:04:38,125 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 09:05:27] 2026-03-09 13:04:58,952 | INFO     | PID=1532394 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 09:05:27] 2026-03-09 13:04:58,972 | INFO     | .. there are 49 such processes running
[2026-03-09 09:05:27] 2026-03-09 13:04:58,972 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 09:05:27] 2026-03-09 13:04:58,972 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 09:05:27] 2026-03-09 13:04:58,972 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 09:05:27] 2026-03-09 13:05:19,632 | INFO     | [monitor] cgroup control has ended
[2026-03-09 09:05:27] 2026-03-09 13:05:21,005 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140180054447936)>', '<ExcThread(monitor, started 140179612366592)>']
[2026-03-09 09:05:27] 2026-03-09 13:05:21,131 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 09:05:27] 2026-03-09 13:05:21,131 | INFO     | [monitor] control thread has ended
[2026-03-09 09:05:27] 2026-03-09 13:05:26,031 | INFO     | all workflow threads have been joined
[2026-03-09 09:05:27] 2026-03-09 13:05:26,031 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 09:05:27] 2026-03-09 13:05:26,031 | INFO     | traces error code: 0
[2026-03-09 09:05:27] 2026-03-09 13:05:26,032 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 09:05:27] 2026-03-09 13:05:26,307 [wrapper] ==== pilot stdout END ====
[2026-03-09 09:05:27] 2026-03-09 13:05:26,318 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 09:05:27] 2026-03-09 13:05:26,328 [wrapper] pilotpid: 1532394
[2026-03-09 09:05:27] 2026-03-09 13:05:26,374 [wrapper] Pilot exit status: 0
[2026-03-09 09:05:27] 2026-03-09 13:05:26,464 [wrapper] pandaids: 7034564621
[2026-03-09 09:05:27] 2026-03-09 13:05:26,861 [wrapper] cleanup supervisor_pilot 1929927 1532395
[2026-03-09 09:05:27] 2026-03-09 13:05:26,879 [wrapper] Test setup, not cleaning
[2026-03-09 09:05:27] 2026-03-09 13:05:26,894 [wrapper] apfmon messages muted
[2026-03-09 09:05:27] 2026-03-09 13:05:26,915 [wrapper] ==== wrapper stdout END ====
[2026-03-09 09:05:27] 2026-03-09 13:05:26,933 [wrapper] ==== wrapper stderr END ====
[2026-03-09 09:05:27]  *** Error codes and diagnostics ***
[2026-03-09 09:05:27]     "exeErrorCode": 0,
[2026-03-09 09:05:27]     "exeErrorDiag": "",
[2026-03-09 09:05:27]     "pilotErrorCode": 0,
[2026-03-09 09:05:27]     "pilotErrorDiag": "",
[2026-03-09 09:05:27]  *** Listing of results directory ***
[2026-03-09 09:05:27] total 331604
[2026-03-09 09:05:27] -rw-r--r--. 1 boincer umatlas    584627 Mar  1 02:29 pilot3.tar.gz
[2026-03-09 09:05:27] -rwx------. 1 boincer umatlas     36322 Mar  1 02:31 runpilot2-wrapper.sh
[2026-03-09 09:05:27] -rw-r--r--. 1 boincer umatlas      5111 Mar  1 02:34 queuedata.json
[2026-03-09 09:05:27] -rw-r--r--. 1 boincer umatlas       100 Mar  9 07:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 09:05:27] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  9 07:45 run_atlas
[2026-03-09 09:05:27] -rw-r--r--. 1 boincer umatlas       105 Mar  9 07:45 job.xml
[2026-03-09 09:05:27] -rw-r--r--. 2 boincer umatlas 188640641 Mar  9 07:45 EVNT.48700928._000038.pool.root.1
[2026-03-09 09:05:27] -rw-r--r--. 2 boincer umatlas     15845 Mar  9 07:45 start_atlas.sh
[2026-03-09 09:05:27] drwxrwx--x. 2 boincer umatlas      4096 Mar  9 07:45 shared
[2026-03-09 09:05:27] -rw-r--r--. 2 boincer umatlas    597948 Mar  9 07:45 input.tar.gz
[2026-03-09 09:05:27] -rw-r--r--. 1 boincer umatlas         0 Mar  9 07:45 boinc_lockfile
[2026-03-09 09:05:27] -rw-r--r--. 1 boincer umatlas      2516 Mar  9 07:45 pandaJob.out
[2026-03-09 09:05:27] -rw-------. 1 boincer umatlas        57 Mar  9 07:45 setup.sh.local
[2026-03-09 09:05:27] -rw-------. 1 boincer umatlas    990710 Mar  9 07:46 agis_schedconf.cvmfs.json
[2026-03-09 09:05:27] -rw-------. 1 boincer umatlas   1511578 Mar  9 07:46 agis_ddmendpoints.agis.ALL.json
[2026-03-09 09:05:27] -rw-------. 1 boincer umatlas       432 Mar  9 07:47 workernode_map.json
[2026-03-09 09:05:27] drwx------. 5 boincer umatlas      4096 Mar  9 07:47 pilot3
[2026-03-09 09:05:27] -rw-r--r--. 1 boincer umatlas      7183 Mar  9 09:02 init_data.xml
[2026-03-09 09:05:27] -rw-------. 1 boincer umatlas 145115105 Mar  9 09:03 HITS.48700930._000942.pool.root.1
[2026-03-09 09:05:27] -rw-r--r--. 1 boincer umatlas       529 Mar  9 09:03 boinc_task_state.xml
[2026-03-09 09:05:27] -rw-------. 1 boincer umatlas        95 Mar  9 09:04 pilot_heartbeat.json
[2026-03-09 09:05:27] -rw-------. 1 boincer umatlas      1044 Mar  9 09:04 memory_monitor_summary.json
[2026-03-09 09:05:27] -rw-------. 1 boincer umatlas    317282 Mar  9 09:04 log.48700930._000942.job.log.tgz.1
[2026-03-09 09:05:27] -rw-------. 1 boincer umatlas      6342 Mar  9 09:04 heartbeat.json
[2026-03-09 09:05:27] -rw-------. 1 boincer umatlas      4893 Mar  9 09:05 pilotlog.txt
[2026-03-09 09:05:27] -rw-r--r--. 1 boincer umatlas      8192 Mar  9 09:05 boinc_mmap_file
[2026-03-09 09:05:27] -rw-------. 1 boincer umatlas    628636 Mar  9 09:05 log.48700930._000942.job.log.1
[2026-03-09 09:05:27] -rw-r--r--. 1 boincer umatlas        27 Mar  9 09:05 wrapper_checkpoint.txt
[2026-03-09 09:05:27] -rw-------. 1 boincer umatlas       357 Mar  9 09:05 output.list
[2026-03-09 09:05:27] -rw-r--r--. 1 boincer umatlas       620 Mar  9 09:05 runtime_log
[2026-03-09 09:05:27] -rw-------. 1 boincer umatlas    962560 Mar  9 09:05 result.tar.gz
[2026-03-09 09:05:27] -rw-r--r--. 1 boincer umatlas      9341 Mar  9 09:05 runtime_log.err
[2026-03-09 09:05:27] -rw-------. 1 boincer umatlas       655 Mar  9 09:05 37PKDmyRqG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmNa7KDmMeNI6m.diag
[2026-03-09 09:05:27] -rw-r--r--. 1 boincer umatlas     16434 Mar  9 09:05 stderr.txt
[2026-03-09 09:05:27] HITS file was successfully produced:
[2026-03-09 09:05:27] -rw-------. 1 boincer umatlas 145115105 Mar  9 09:03 shared/HITS.pool.root.1
[2026-03-09 09:05:27]  *** Contents of shared directory: ***
[2026-03-09 09:05:27] total 327480
[2026-03-09 09:05:27] -rw-r--r--. 2 boincer umatlas 188640641 Mar  9 07:45 ATLAS.root_0
[2026-03-09 09:05:27] -rw-r--r--. 2 boincer umatlas     15845 Mar  9 07:45 start_atlas.sh
[2026-03-09 09:05:27] -rw-r--r--. 2 boincer umatlas    597948 Mar  9 07:45 input.tar.gz
[2026-03-09 09:05:27] -rw-------. 1 boincer umatlas 145115105 Mar  9 09:03 HITS.pool.root.1
[2026-03-09 09:05:27] -rw-------. 1 boincer umatlas    962560 Mar  9 09:05 result.tar.gz
09:05:28 (1526896): run_atlas exited; CPU time 17693.889226
09:05:28 (1526896): called boinc_finish(0)

</stderr_txt>
]]>

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