Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
10:49:43 (3189967): wrapper (7.7.26015): starting
10:49:43 (3189967): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 10:49:43] Arguments: --nthreads 4
[2026-03-09 10:49:43] Threads: 4
[2026-03-09 10:49:43] Checking for CVMFS
[2026-03-09 10:49:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 10:49:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 10:49:43] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 10:49:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 10:49:44] 2.13.3.0 1437033 4605 52752 157079 1 54 3238750 4096001 2748 130560 0 3476116 99.991 160297 1049 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-09 10:49:44] CVMFS is ok
[2026-03-09 10:49:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 10:49:44] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-09 10:49:44] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-09 10:49:44] Further information can be found at the LHC@home message board.
[2026-03-09 10:49:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 10:49:44] Checking for apptainer binary...
[2026-03-09 10:49:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 10:49:44] Running /usr/bin/apptainer --version
[2026-03-09 10:49:44] apptainer version 1.4.5
[2026-03-09 10:49:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 10:49:44] T5810-Ubuntu
[2026-03-09 10:49:44] apptainer works
[2026-03-09 10:49:44] Set ATHENA_PROC_NUMBER=4
[2026-03-09 10:49:44] Set ATHENA_CORE_NUMBER=4
[2026-03-09 10:49:44] Starting ATLAS job with PandaID=7047192341
[2026-03-09 10:49:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/21 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 15:05:35]  *** The last 200 lines of the pilot log: ***
[2026-03-09 15:05:35] 2026-03-09 19:04:40,562 | INFO     | preparing for final server update for job 7047192341 in state='finished'
[2026-03-09 15:05:35] 2026-03-09 19:04:40,562 | INFO     | reading metadata from: /home/whitlerd/Desktop/BOINC/slots/21/PanDA_Pilot-7047192341/jobReport.json
[2026-03-09 15:05:35] 2026-03-09 19:04:40,565 | INFO     | added worker_node to metadata from /home/whitlerd/Desktop/BOINC/slots/21/workernode_map.json
[2026-03-09 15:05:35] 2026-03-09 19:04:40,565 | INFO     | this job has now completed (state=finished)
[2026-03-09 15:05:35] 2026-03-09 19:04:40,566 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 15:05:35] 2026-03-09 19:04:40,566 | INFO     | log transfer has been attempted: DONE
[2026-03-09 15:05:35] 2026-03-09 19:04:40,566 | INFO     | job 7047192341 has finished - writing final server update
[2026-03-09 15:05:35] 2026-03-09 19:04:40,566 | INFO     | total number of processed events: 400 (read)
[2026-03-09 15:05:35] 2026-03-09 19:04:40,574 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/21/PanDA_Pilot-7047192341/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 15:05:35] 2026-03-09 19:04:40,575 | INFO     | extracted standard info from prmon json
[2026-03-09 15:05:35] 2026-03-09 19:04:40,575 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 15:05:35] 2026-03-09 19:04:40,575 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 15:05:35] 2026-03-09 19:04:40,576 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 15:05:35] 2026-03-09 19:04:40,576 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 15:05:35] 2026-03-09 19:04:40,581 | INFO     | fitting pss+swap vs Time
[2026-03-09 15:05:35] 2026-03-09 19:04:40,581 | INFO     | sum of square deviations: 4844974562.5
[2026-03-09 15:05:35] 2026-03-09 19:04:40,584 | INFO     | sum of deviations: 272475440.499999
[2026-03-09 15:05:35] 2026-03-09 19:04:40,584 | INFO     | mean x: 1773075421.5
[2026-03-09 15:05:35] 2026-03-09 19:04:40,584 | INFO     | mean y: 2339362.18
[2026-03-09 15:05:35] 2026-03-09 19:04:40,584 | INFO     | intersect: -97376229.77630635
[2026-03-09 15:05:35] 2026-03-09 19:04:40,585 | INFO     | chi2: 1.4917986010447715
[2026-03-09 15:05:35] 2026-03-09 19:04:40,585 | INFO     | sum of square deviations: 4560048290.0
[2026-03-09 15:05:35] 2026-03-09 19:04:40,587 | INFO     | sum of deviations: 310073553.0000065
[2026-03-09 15:05:35] 2026-03-09 19:04:40,587 | INFO     | mean x: 1773075269.0
[2026-03-09 15:05:35] 2026-03-09 19:04:40,587 | INFO     | mean y: 2339382.3061224488
[2026-03-09 15:05:35] 2026-03-09 19:04:40,588 | INFO     | intersect: -118225952.40775011
[2026-03-09 15:05:35] 2026-03-09 19:04:40,588 | INFO     | chi2: 1.4918696711085306
[2026-03-09 15:05:35] 2026-03-09 19:04:40,588 | INFO     | current chi2=1.4918696711085306 (change=-0.004764052178987 %)
[2026-03-09 15:05:35] 2026-03-09 19:04:40,588 | INFO     | right removable region: 244
[2026-03-09 15:05:35] 2026-03-09 19:04:40,589 | INFO     | sum of square deviations: 4560048290.0
[2026-03-09 15:05:35] 2026-03-09 19:04:40,591 | INFO     | sum of deviations: -27789729313.000004
[2026-03-09 15:05:35] 2026-03-09 19:04:40,591 | INFO     | mean x: 1773075574.0
[2026-03-09 15:05:35] 2026-03-09 19:04:40,591 | INFO     | mean y: 2354185.6285714284
[2026-03-09 15:05:35] 2026-03-09 19:04:40,591 | INFO     | intersect: 10807785865.15846
[2026-03-09 15:05:35] 2026-03-09 19:04:40,592 | INFO     | chi2: 0.19236869467139606
[2026-03-09 15:05:35] 2026-03-09 19:04:40,592 | INFO     | current chi2=0.19236869467139606 (change=87.10491519856153 %)
[2026-03-09 15:05:35] 2026-03-09 19:04:40,592 | INFO     | sum of square deviations: 4286517580.0
[2026-03-09 15:05:35] 2026-03-09 19:04:40,594 | INFO     | sum of deviations: -18082785404.999996
[2026-03-09 15:05:35] 2026-03-09 19:04:40,595 | INFO     | mean x: 1773075726.5
[2026-03-09 15:05:35] 2026-03-09 19:04:40,595 | INFO     | mean y: 2348761.466666667
[2026-03-09 15:05:35] 2026-03-09 19:04:40,595 | INFO     | intersect: 7482114625.185337
[2026-03-09 15:05:35] 2026-03-09 19:04:40,595 | INFO     | chi2: 0.14689075328009646
[2026-03-09 15:05:35] 2026-03-09 19:04:40,595 | INFO     | current chi2=0.14689075328009646 (change=23.6410302980872 %)
[2026-03-09 15:05:35] 2026-03-09 19:04:40,596 | INFO     | left removable region: 20
[2026-03-09 15:05:35] 2026-03-09 19:04:40,596 | INFO     | sum of square deviations: 3485088600.0
[2026-03-09 15:05:35] 2026-03-09 19:04:40,598 | INFO     | sum of deviations: 2440695644.0
[2026-03-09 15:05:35] 2026-03-09 19:04:40,598 | INFO     | mean x: 1773075848.5
[2026-03-09 15:05:35] 2026-03-09 19:04:40,598 | INFO     | mean y: 2336530.6339285714
[2026-03-09 15:05:35] 2026-03-09 19:04:40,598 | INFO     | intersect: -1239393306.5689344
[2026-03-09 15:05:35] 2026-03-09 19:04:40,599 | INFO     | chi2: 0.006879267351863703
[2026-03-09 15:05:35] 2026-03-09 19:04:40,599 | INFO     | current memory leak: 0.70 B/s (using 224 data points, chi2=0.01)
[2026-03-09 15:05:35] 2026-03-09 19:04:40,600 | INFO     | could have reported an average CPU frequency of 2462 MHz (12 samples)
[2026-03-09 15:05:35] 2026-03-09 19:04:40,600 | INFO     | ..............................
[2026-03-09 15:05:35] 2026-03-09 19:04:40,600 | INFO     | . Timing measurements:
[2026-03-09 15:05:35] 2026-03-09 19:04:40,600 | INFO     | . get job = 0 s
[2026-03-09 15:05:35] 2026-03-09 19:04:40,600 | INFO     | . initial setup = 7 s
[2026-03-09 15:05:35] 2026-03-09 19:04:40,600 | INFO     | . payload setup = 6 s
[2026-03-09 15:05:35] 2026-03-09 19:04:40,600 | INFO     | . stage-in = 0 s
[2026-03-09 15:05:35] 2026-03-09 19:04:40,600 | INFO     | . payload execution = 15247 s
[2026-03-09 15:05:35] 2026-03-09 19:04:40,601 | INFO     | . stage-out = 2 s
[2026-03-09 15:05:35] 2026-03-09 19:04:40,601 | INFO     | . log creation = 0 s
[2026-03-09 15:05:35] 2026-03-09 19:04:40,601 | INFO     | ..............................
[2026-03-09 15:05:35] 2026-03-09 19:04:40,713 | INFO     | 
[2026-03-09 15:05:35] 2026-03-09 19:04:40,713 | INFO     | job summary report
[2026-03-09 15:05:35] 2026-03-09 19:04:40,713 | INFO     | --------------------------------------------------
[2026-03-09 15:05:35] 2026-03-09 19:04:40,713 | INFO     | PanDA job id: 7047192341
[2026-03-09 15:05:35] 2026-03-09 19:04:40,713 | INFO     | task id: 48998022
[2026-03-09 15:05:35] 2026-03-09 19:04:40,713 | INFO     | errors: (none)
[2026-03-09 15:05:35] 2026-03-09 19:04:40,713 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 15:05:35] 2026-03-09 19:04:40,713 | INFO     | pilot state: finished 
[2026-03-09 15:05:35] 2026-03-09 19:04:40,713 | INFO     | transexitcode: 0
[2026-03-09 15:05:35] 2026-03-09 19:04:40,714 | INFO     | exeerrorcode: 0
[2026-03-09 15:05:35] 2026-03-09 19:04:40,714 | INFO     | exeerrordiag: 
[2026-03-09 15:05:35] 2026-03-09 19:04:40,714 | INFO     | exitcode: 0
[2026-03-09 15:05:35] 2026-03-09 19:04:40,714 | INFO     | exitmsg: OK
[2026-03-09 15:05:35] 2026-03-09 19:04:40,714 | INFO     | cpuconsumptiontime: 59834 s
[2026-03-09 15:05:35] 2026-03-09 19:04:40,714 | INFO     | nevents: 400
[2026-03-09 15:05:35] 2026-03-09 19:04:40,714 | INFO     | neventsw: 0
[2026-03-09 15:05:35] 2026-03-09 19:04:40,714 | INFO     | pid: 3198930
[2026-03-09 15:05:35] 2026-03-09 19:04:40,714 | INFO     | pgrp: 3198930
[2026-03-09 15:05:35] 2026-03-09 19:04:40,714 | INFO     | corecount: 4
[2026-03-09 15:05:35] 2026-03-09 19:04:40,714 | INFO     | event service: False
[2026-03-09 15:05:35] 2026-03-09 19:04:40,715 | INFO     | sizes: {0: 2280096, 1: 2280302, 11: 2280330, 15257: 2311369, 15260: 2320397, 15262: 2320453, 15264: 2320775}
[2026-03-09 15:05:35] 2026-03-09 19:04:40,715 | INFO     | --------------------------------------------------
[2026-03-09 15:05:35] 2026-03-09 19:04:40,715 | INFO     | 
[2026-03-09 15:05:35] 2026-03-09 19:04:40,715 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/21
[2026-03-09 15:05:35] 2026-03-09 19:04:40,742 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 15:05:35] 2026-03-09 19:04:40,742 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 15:05:35] 2026-03-09 19:04:40,742 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 15:05:35] 2026-03-09 19:04:40,742 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 15:05:35] 2026-03-09 19:04:40,742 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 15:05:35] 2026-03-09 19:04:40,742 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 15:05:35] 2026-03-09 19:04:40,743 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 15:05:35] 2026-03-09 19:04:40,743 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 15:05:35] 2026-03-09 19:04:40,743 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 15:05:35] 2026-03-09 19:04:40,743 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 15:05:35] 2026-03-09 19:04:40,743 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 15:05:35] 2026-03-09 19:04:40,743 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 15:05:35] 2026-03-09 19:04:40,743 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 15:05:35] 2026-03-09 19:04:40,743 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 15:05:35] 2026-03-09 19:04:40,743 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 15:05:35] 2026-03-09 19:04:40,743 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 15:05:35] 2026-03-09 19:04:40,744 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 15:05:35] 2026-03-09 19:04:40,744 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 15:05:35] 2026-03-09 19:04:40,744 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 15:05:35] 2026-03-09 19:04:40,744 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 15:05:35] 2026-03-09 19:04:40,744 | INFO     | job 7047192341 has completed (purged errors)
[2026-03-09 15:05:35] 2026-03-09 19:04:40,744 | INFO     | overall cleanup function is called
[2026-03-09 15:05:35] 2026-03-09 19:04:41,550 | INFO     | PID=3194203 has CPU usage=9.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 15:05:35] 2026-03-09 19:04:41,550 | INFO     | .. there are 4 such processes running
[2026-03-09 15:05:35] 2026-03-09 19:04:41,753 | INFO     | --- collectZombieJob: --- 10, [3198930]
[2026-03-09 15:05:35] 2026-03-09 19:04:41,753 | INFO     | zombie collector waiting for pid 3198930
[2026-03-09 15:05:35] 2026-03-09 19:04:41,753 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 15:05:35] 2026-03-09 19:04:41,753 | INFO     | collected zombie processes
[2026-03-09 15:05:35] 2026-03-09 19:04:41,753 | INFO     | will attempt to kill all subprocesses of pid=3198930
[2026-03-09 15:05:35] 2026-03-09 19:04:41,989 | INFO     | process IDs to be killed: [3198930] (in reverse order)
[2026-03-09 15:05:35] 2026-03-09 19:04:42,074 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 15:05:35] 2026-03-09 19:04:42,075 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 15:05:35] 2026-03-09 19:04:42,081 | INFO     | did not find any defunct processes belonging to 3198930
[2026-03-09 15:05:35] 2026-03-09 19:04:42,087 | INFO     | did not find any defunct processes belonging to 3198930
[2026-03-09 15:05:35] 2026-03-09 19:04:42,087 | INFO     | ready for new job
[2026-03-09 15:05:35] 2026-03-09 19:04:42,087 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 15:05:35] 2026-03-09 19:04:42,090 | INFO     | **************************************
[2026-03-09 15:05:35] 2026-03-09 19:04:42,090 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 15:05:35] 2026-03-09 19:04:42,090 | INFO     | **************************************
[2026-03-09 15:05:35] 2026-03-09 19:04:42,090 | INFO     | 
[2026-03-09 15:05:35] 2026-03-09 19:04:42,092 | INFO     | architecture information:
[2026-03-09 15:05:35] 2026-03-09 19:04:42,093 | INFO     | executing command: cat /etc/os-release
[2026-03-09 15:05:35] 2026-03-09 19:04:42,109 | INFO     | cat /etc/os-release:
[2026-03-09 15:05:35] NAME="CentOS Linux"
[2026-03-09 15:05:35] VERSION="7 (Core)"
[2026-03-09 15:05:35] ID="centos"
[2026-03-09 15:05:35] ID_LIKE="rhel fedora"
[2026-03-09 15:05:35] VERSION_ID="7"
[2026-03-09 15:05:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 15:05:35] ANSI_COLOR="0;31"
[2026-03-09 15:05:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 15:05:35] HOME_URL="https://www.centos.org/"
[2026-03-09 15:05:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 15:05:35] 
[2026-03-09 15:05:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 15:05:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 15:05:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 15:05:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 15:05:35] 
[2026-03-09 15:05:35] 2026-03-09 19:04:42,110 | INFO     | **************************************
[2026-03-09 15:05:35] 2026-03-09 19:04:42,612 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/21
[2026-03-09 15:05:35] 2026-03-09 19:04:42,633 | INFO     | sufficient remaining disk space (406522429440 B)
[2026-03-09 15:05:35] 2026-03-09 19:04:42,633 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 15:05:35] 2026-03-09 19:04:42,633 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 15:05:35] 2026-03-09 19:04:42,634 | INFO     | update_server=False
[2026-03-09 15:05:35] 2026-03-09 19:04:42,634 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 15:05:35] 2026-03-09 19:04:42,634 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 15:05:35] 2026-03-09 19:04:42,634 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 15:05:35] 2026-03-09 19:04:42,635 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 15:05:35] 2026-03-09 19:04:42,635 | INFO     | aborting loop
[2026-03-09 15:05:35] 2026-03-09 19:04:43,639 | INFO     | [job] retrieve thread has finished
[2026-03-09 15:05:35] 2026-03-09 19:04:43,640 | INFO     | [job] queue monitor thread has finished
[2026-03-09 15:05:35] 2026-03-09 19:04:43,640 | INFO     | [job] job monitor thread has finished
[2026-03-09 15:05:35] 2026-03-09 19:04:43,643 | INFO     | all job control threads have been joined
[2026-03-09 15:05:35] 2026-03-09 19:04:43,666 | INFO     | [data] copytool_in thread has finished
[2026-03-09 15:05:35] 2026-03-09 19:04:43,680 | INFO     | all data control threads have been joined
[2026-03-09 15:05:35] 2026-03-09 19:04:43,700 | INFO     | all payload control threads have been joined
[2026-03-09 15:05:35] 2026-03-09 19:04:44,014 | INFO     | [payload] validate_post thread has finished
[2026-03-09 15:05:35] 2026-03-09 19:04:44,407 | INFO     | [job] validate thread has finished
[2026-03-09 15:05:35] 2026-03-09 19:04:44,412 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 15:05:35] 2026-03-09 19:04:44,514 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 15:05:35] 2026-03-09 19:04:44,641 | INFO     | [data] copytool_out thread has finished
[2026-03-09 15:05:35] 2026-03-09 19:04:44,648 | INFO     | [job] control thread has finished
[2026-03-09 15:05:35] 2026-03-09 19:04:44,685 | INFO     | [data] control thread has finished
[2026-03-09 15:05:35] 2026-03-09 19:04:44,705 | INFO     | [payload] control thread has finished
[2026-03-09 15:05:35] 2026-03-09 19:04:44,799 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 15:05:35] 2026-03-09 19:04:44,805 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 15:05:35] 2026-03-09 19:04:45,013 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 15:05:35] 2026-03-09 19:04:45,091 | INFO     | [payload] failed_post thread has finished
[2026-03-09 15:05:35] 2026-03-09 19:04:48,420 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 15:05:35] 2026-03-09 19:04:56,434 [wrapper] supervise_pilot (15 min periods counter: 18)
[2026-03-09 15:05:35] 2026-03-09 19:05:13,933 | INFO     | PID=3194203 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 15:05:35] 2026-03-09 19:05:13,934 | INFO     | .. there are 4 such processes running
[2026-03-09 15:05:35] 2026-03-09 19:05:13,934 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 15:05:35] 2026-03-09 19:05:13,935 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 15:05:35] 2026-03-09 19:05:13,935 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 15:05:35] 2026-03-09 19:05:28,664 | INFO     | [monitor] cgroup control has ended
[2026-03-09 15:05:35] 2026-03-09 19:05:30,416 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138021252286272)>', '<ExcThread(monitor, started 138020753749760)>']
[2026-03-09 15:05:35] 2026-03-09 19:05:31,021 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 15:05:35] 2026-03-09 19:05:31,021 | INFO     | [monitor] control thread has ended
[2026-03-09 15:05:35] 2026-03-09 19:05:35,441 | INFO     | all workflow threads have been joined
[2026-03-09 15:05:35] 2026-03-09 19:05:35,441 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 15:05:35] 2026-03-09 19:05:35,442 | INFO     | traces error code: 0
[2026-03-09 15:05:35] 2026-03-09 19:05:35,442 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 15:05:35] 2026-03-09 19:05:35,551 [wrapper] ==== pilot stdout END ====
[2026-03-09 15:05:35] 2026-03-09 19:05:35,554 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 15:05:35] 2026-03-09 19:05:35,558 [wrapper] pilotpid: 3194203
[2026-03-09 15:05:35] 2026-03-09 19:05:35,560 [wrapper] Pilot exit status: 0
[2026-03-09 15:05:35] 2026-03-09 19:05:35,571 [wrapper] pandaids: 7047192341
[2026-03-09 15:05:35] 2026-03-09 19:05:35,611 [wrapper] cleanup supervisor_pilot 3319319 3194204
[2026-03-09 15:05:35] 2026-03-09 19:05:35,615 [wrapper] Test setup, not cleaning
[2026-03-09 15:05:35] 2026-03-09 19:05:35,617 [wrapper] apfmon messages muted
[2026-03-09 15:05:35] 2026-03-09 19:05:35,620 [wrapper] ==== wrapper stdout END ====
[2026-03-09 15:05:35] 2026-03-09 19:05:35,622 [wrapper] ==== wrapper stderr END ====
[2026-03-09 15:05:35]  *** Error codes and diagnostics ***
[2026-03-09 15:05:35]     "exeErrorCode": 0,
[2026-03-09 15:05:35]     "exeErrorDiag": "",
[2026-03-09 15:05:35]     "pilotErrorCode": 0,
[2026-03-09 15:05:35]     "pilotErrorDiag": "",
[2026-03-09 15:05:35]  *** Listing of results directory ***
[2026-03-09 15:05:35] total 563344
[2026-03-09 15:05:35] -rw-r--r-- 1 whitlerd whitlerd    584627 Mar  9 06:57 pilot3.tar.gz
[2026-03-09 15:05:35] -rwx------ 1 whitlerd whitlerd     36322 Mar  9 07:00 runpilot2-wrapper.sh
[2026-03-09 15:05:35] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar  9 07:01 queuedata.json
[2026-03-09 15:05:35] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar  9 10:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 15:05:35] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar  9 10:49 run_atlas
[2026-03-09 15:05:35] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar  9 10:49 job.xml
[2026-03-09 15:05:35] -rw-r--r-- 2 whitlerd whitlerd 329953018 Mar  9 10:49 EVNT.48998020._000054.pool.root.1
[2026-03-09 15:05:35] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  9 10:49 start_atlas.sh
[2026-03-09 15:05:35] drwxrwx--x 2 whitlerd whitlerd      4096 Mar  9 10:49 shared
[2026-03-09 15:05:35] -rw-r--r-- 2 whitlerd whitlerd    597973 Mar  9 10:49 input.tar.gz
[2026-03-09 15:05:35] -rw-rw-r-- 1 whitlerd whitlerd      9087 Mar  9 10:49 init_data.xml
[2026-03-09 15:05:35] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  9 10:49 boinc_setup_complete
[2026-03-09 15:05:35] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  9 10:49 boinc_lockfile
[2026-03-09 15:05:35] -rw-rw-r-- 1 whitlerd whitlerd      2611 Mar  9 10:49 pandaJob.out
[2026-03-09 15:05:35] -rw------- 1 whitlerd whitlerd    990760 Mar  9 10:49 agis_schedconf.cvmfs.json
[2026-03-09 15:05:35] -rw------- 1 whitlerd whitlerd       426 Mar  9 10:50 workernode_map.json
[2026-03-09 15:05:35] drwx------ 5 whitlerd whitlerd      4096 Mar  9 10:50 pilot3
[2026-03-09 15:05:35] -rw------- 1 whitlerd whitlerd 237763848 Mar  9 15:03 HITS.48998022._001319.pool.root.1
[2026-03-09 15:05:35] -rw-rw-r-- 1 whitlerd whitlerd       530 Mar  9 15:03 boinc_task_state.xml
[2026-03-09 15:05:35] -rw------- 1 whitlerd whitlerd      1030 Mar  9 15:04 memory_monitor_summary.json
[2026-03-09 15:05:35] -rw------- 1 whitlerd whitlerd   1511578 Mar  9 15:04 agis_ddmendpoints.agis.ALL.json
[2026-03-09 15:05:35] -rw------- 1 whitlerd whitlerd    421563 Mar  9 15:04 log.48998022._001319.job.log.tgz.1
[2026-03-09 15:05:35] -rw------- 1 whitlerd whitlerd      6327 Mar  9 15:04 heartbeat.json
[2026-03-09 15:05:35] -rw------- 1 whitlerd whitlerd        95 Mar  9 15:05 pilot_heartbeat.json
[2026-03-09 15:05:35] -rw-rw-r-- 1 whitlerd whitlerd        28 Mar  9 15:05 wrapper_checkpoint.txt
[2026-03-09 15:05:35] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar  9 15:05 boinc_mmap_file
[2026-03-09 15:05:35] -rw------- 1 whitlerd whitlerd      4835 Mar  9 15:05 pilotlog.txt
[2026-03-09 15:05:35] -rw------- 1 whitlerd whitlerd   2190057 Mar  9 15:05 log.48998022._001319.job.log.1
[2026-03-09 15:05:35] -rw------- 1 whitlerd whitlerd       357 Mar  9 15:05 output.list
[2026-03-09 15:05:35] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar  9 15:05 runtime_log
[2026-03-09 15:05:35] -rw------- 1 whitlerd whitlerd   2631680 Mar  9 15:05 result.tar.gz
[2026-03-09 15:05:35] -rw------- 1 whitlerd whitlerd       649 Mar  9 15:05 YGZKDm9WnJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm4GcLDmkJEkWn.diag
[2026-03-09 15:05:35] -rw-rw-r-- 1 whitlerd whitlerd      9036 Mar  9 15:05 runtime_log.err
[2026-03-09 15:05:35] -rw-rw-r-- 1 whitlerd whitlerd     21491 Mar  9 15:05 stderr.txt
[2026-03-09 15:05:35] HITS file was successfully produced:
[2026-03-09 15:05:35] -rw------- 1 whitlerd whitlerd 237763848 Mar  9 15:03 shared/HITS.pool.root.1
[2026-03-09 15:05:35]  *** Contents of shared directory: ***
[2026-03-09 15:05:35] total 557592
[2026-03-09 15:05:35] -rw-r--r-- 2 whitlerd whitlerd 329953018 Mar  9 10:49 ATLAS.root_0
[2026-03-09 15:05:35] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  9 10:49 start_atlas.sh
[2026-03-09 15:05:35] -rw-r--r-- 2 whitlerd whitlerd    597973 Mar  9 10:49 input.tar.gz
[2026-03-09 15:05:35] -rw------- 1 whitlerd whitlerd 237763848 Mar  9 15:03 HITS.pool.root.1
[2026-03-09 15:05:35] -rw------- 1 whitlerd whitlerd   2631680 Mar  9 15:05 result.tar.gz
15:05:36 (3189967): run_atlas exited; CPU time 60313.069256
15:05:36 (3189967): called boinc_finish(0)

</stderr_txt>
]]>

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