Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:21:21 (39098): wrapper (7.7.26015): starting
13:21:21 (39098): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 13:21:21] Arguments: --nthreads 4
[2026-03-10 13:21:21] Threads: 4
[2026-03-10 13:21:21] Checking for CVMFS
[2026-03-10 13:21:21] No cvmfs_config command found, will try listing directly
[2026-03-10 13:21:21] CVMFS is ok
[2026-03-10 13:21:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 13:21:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 13:21:21] Further information can be found at the LHC@home message board.
[2026-03-10 13:21:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 13:21:21] Checking for apptainer binary...
[2026-03-10 13:21:21] which: no apptainer in ((null))
[2026-03-10 13:21:21] apptainer is not installed, using version from CVMFS
[2026-03-10 13:21:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 13:21:21] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot76/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-03-10 13:21:21] apptainer works
[2026-03-10 13:21:21] Set ATHENA_PROC_NUMBER=4
[2026-03-10 13:21:21] Set ATHENA_CORE_NUMBER=4
[2026-03-10 13:21:21] Starting ATLAS job with PandaID=7047192152
[2026-03-10 13:21:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot76/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 15:13:04]  *** The last 200 lines of the pilot log: ***
[2026-03-10 15:13:04] 2026-03-10 14:10:03,787 | INFO     | job 7047192152 has finished - writing final server update
[2026-03-10 15:13:04] 2026-03-10 14:10:03,787 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3661861/.job.ad'
[2026-03-10 15:13:04] 2026-03-10 14:10:03,787 | INFO     | total number of processed events: 400 (read)
[2026-03-10 15:13:04] 2026-03-10 14:10:03,806 | INFO     | using path: /var/lib/boinc/var/slot76/slots/2/PanDA_Pilot-7047192152/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 15:13:04] 2026-03-10 14:10:03,806 | INFO     | extracted standard info from prmon json
[2026-03-10 15:13:04] 2026-03-10 14:10:03,807 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 15:13:04] 2026-03-10 14:10:03,807 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 15:13:04] 2026-03-10 14:10:03,807 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 15:13:04] 2026-03-10 14:10:03,807 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 15:13:04] 2026-03-10 14:10:03,808 | INFO     | fitting pss+swap vs Time
[2026-03-10 15:13:04] 2026-03-10 14:10:03,808 | INFO     | sum of square deviations: 379832238.0
[2026-03-10 15:13:04] 2026-03-10 14:10:03,809 | INFO     | sum of deviations: 2274298929.000002
[2026-03-10 15:13:04] 2026-03-10 14:10:03,809 | INFO     | mean x: 1773148548.0
[2026-03-10 15:13:04] 2026-03-10 14:10:03,809 | INFO     | mean y: 2311222.9158878503
[2026-03-10 15:13:04] 2026-03-10 14:10:03,809 | INFO     | intersect: -10614665010.876854
[2026-03-10 15:13:04] 2026-03-10 14:10:03,809 | INFO     | chi2: 1.9207377260075673
[2026-03-10 15:13:04] 2026-03-10 14:10:03,809 | INFO     | sum of square deviations: 329031285.5
[2026-03-10 15:13:04] 2026-03-10 14:10:03,809 | INFO     | sum of deviations: 8699312479.999998
[2026-03-10 15:13:04] 2026-03-10 14:10:03,809 | INFO     | mean x: 1773148395.5
[2026-03-10 15:13:04] 2026-03-10 14:10:03,809 | INFO     | mean y: 2329735.5490196077
[2026-03-10 15:13:04] 2026-03-10 14:10:03,810 | INFO     | intersect: -46878233437.72139
[2026-03-10 15:13:04] 2026-03-10 14:10:03,810 | INFO     | chi2: 1.0994439660916855
[2026-03-10 15:13:04] 2026-03-10 14:10:03,810 | INFO     | current chi2=1.0994439660916855 (change=42.75928716322023 %)
[2026-03-10 15:13:04] 2026-03-10 14:10:03,810 | INFO     | sum of square deviations: 282974608.0
[2026-03-10 15:13:04] 2026-03-10 14:10:03,810 | INFO     | sum of deviations: 8168481573.999999
[2026-03-10 15:13:04] 2026-03-10 14:10:03,810 | INFO     | mean x: 1773148243.0
[2026-03-10 15:13:04] 2026-03-10 14:10:03,810 | INFO     | mean y: 2327976.762886598
[2026-03-10 15:13:04] 2026-03-10 14:10:03,810 | INFO     | intersect: -51182224776.16812
[2026-03-10 15:13:04] 2026-03-10 14:10:03,810 | INFO     | chi2: 1.1015371422340863
[2026-03-10 15:13:04] 2026-03-10 14:10:03,810 | INFO     | current chi2=1.1015371422340863 (change=-0.19038497703904197 %)
[2026-03-10 15:13:04] 2026-03-10 14:10:03,810 | INFO     | right removable region: 96
[2026-03-10 15:13:04] 2026-03-10 14:10:03,810 | INFO     | sum of square deviations: 329031285.5
[2026-03-10 15:13:04] 2026-03-10 14:10:03,811 | INFO     | sum of deviations: -7377819399.0
[2026-03-10 15:13:04] 2026-03-10 14:10:03,811 | INFO     | mean x: 1773148700.5
[2026-03-10 15:13:04] 2026-03-10 14:10:03,811 | INFO     | mean y: 2339262.4901960786
[2026-03-10 15:13:04] 2026-03-10 14:10:03,811 | INFO     | intersect: 39761387889.06993
[2026-03-10 15:13:04] 2026-03-10 14:10:03,811 | INFO     | chi2: 0.8551342710716257
[2026-03-10 15:13:04] 2026-03-10 14:10:03,811 | INFO     | current chi2=0.8551342710716257 (change=55.47886317362537 %)
[2026-03-10 15:13:04] 2026-03-10 14:10:03,811 | INFO     | sum of square deviations: 282974608.0
[2026-03-10 15:13:04] 2026-03-10 14:10:03,811 | INFO     | sum of deviations: -6858876112.0
[2026-03-10 15:13:04] 2026-03-10 14:10:03,811 | INFO     | mean x: 1773148853.0
[2026-03-10 15:13:04] 2026-03-10 14:10:03,811 | INFO     | mean y: 2337538.845360825
[2026-03-10 15:13:04] 2026-03-10 14:10:03,811 | INFO     | intersect: 42980781424.036285
[2026-03-10 15:13:04] 2026-03-10 14:10:03,811 | INFO     | chi2: 0.8564795496048239
[2026-03-10 15:13:04] 2026-03-10 14:10:03,811 | INFO     | current chi2=0.8564795496048239 (change=-0.157317812968992 %)
[2026-03-10 15:13:04] 2026-03-10 14:10:03,811 | INFO     | left removable region: 20
[2026-03-10 15:13:04] 2026-03-10 14:10:03,811 | INFO     | sum of square deviations: 136095575.0
[2026-03-10 15:13:04] 2026-03-10 14:10:03,812 | INFO     | sum of deviations: -445230490.5000001
[2026-03-10 15:13:04] 2026-03-10 14:10:03,812 | INFO     | mean x: 1773148822.5
[2026-03-10 15:13:04] 2026-03-10 14:10:03,812 | INFO     | mean y: 2357953.5657894737
[2026-03-10 15:13:04] 2026-03-10 14:10:03,812 | INFO     | intersect: 5803133768.438334
[2026-03-10 15:13:04] 2026-03-10 14:10:03,812 | INFO     | chi2: 0.00035924300025247336
[2026-03-10 15:13:04] 2026-03-10 14:10:03,812 | INFO     | current memory leak: -3.27 B/s (using 76 data points, chi2=0.00)
[2026-03-10 15:13:04] 2026-03-10 14:10:03,812 | INFO     | could have reported an average CPU frequency of 3563 MHz (7 samples)
[2026-03-10 15:13:04] 2026-03-10 14:10:03,812 | INFO     | ..............................
[2026-03-10 15:13:04] 2026-03-10 14:10:03,812 | INFO     | . Timing measurements:
[2026-03-10 15:13:04] 2026-03-10 14:10:03,812 | INFO     | . get job = 0 s
[2026-03-10 15:13:04] 2026-03-10 14:10:03,812 | INFO     | . initial setup = 5 s
[2026-03-10 15:13:04] 2026-03-10 14:10:03,812 | INFO     | . payload setup = 5 s
[2026-03-10 15:13:04] 2026-03-10 14:10:03,812 | INFO     | . stage-in = 0 s
[2026-03-10 15:13:04] 2026-03-10 14:10:03,812 | INFO     | . payload execution = 6481 s
[2026-03-10 15:13:04] 2026-03-10 14:10:03,812 | INFO     | . stage-out = 0 s
[2026-03-10 15:13:04] 2026-03-10 14:10:03,812 | INFO     | . log creation = 0 s
[2026-03-10 15:13:04] 2026-03-10 14:10:03,812 | INFO     | ..............................
[2026-03-10 15:13:04] 2026-03-10 14:10:03,831 | INFO     | time since job start (6509s) is within the limit (349056.0s)
[2026-03-10 15:13:04] 2026-03-10 14:10:03,863 | INFO     | 
[2026-03-10 15:13:04] 2026-03-10 14:10:03,864 | INFO     | job summary report
[2026-03-10 15:13:04] 2026-03-10 14:10:03,864 | INFO     | --------------------------------------------------
[2026-03-10 15:13:04] 2026-03-10 14:10:03,864 | INFO     | PanDA job id: 7047192152
[2026-03-10 15:13:04] 2026-03-10 14:10:03,864 | INFO     | task id: 48998022
[2026-03-10 15:13:04] 2026-03-10 14:10:03,864 | INFO     | errors: (none)
[2026-03-10 15:13:04] 2026-03-10 14:10:03,864 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 15:13:04] 2026-03-10 14:10:03,864 | INFO     | pilot state: finished 
[2026-03-10 15:13:04] 2026-03-10 14:10:03,864 | INFO     | transexitcode: 0
[2026-03-10 15:13:04] 2026-03-10 14:10:03,864 | INFO     | exeerrorcode: 0
[2026-03-10 15:13:04] 2026-03-10 14:10:03,864 | INFO     | exeerrordiag: 
[2026-03-10 15:13:04] 2026-03-10 14:10:03,864 | INFO     | exitcode: 0
[2026-03-10 15:13:04] 2026-03-10 14:10:03,864 | INFO     | exitmsg: OK
[2026-03-10 15:13:04] 2026-03-10 14:10:03,864 | INFO     | cpuconsumptiontime: 24726 s
[2026-03-10 15:13:04] 2026-03-10 14:10:03,864 | INFO     | nevents: 400
[2026-03-10 15:13:04] 2026-03-10 14:10:03,864 | INFO     | neventsw: 0
[2026-03-10 15:13:04] 2026-03-10 14:10:03,864 | INFO     | pid: 49518
[2026-03-10 15:13:04] 2026-03-10 14:10:03,864 | INFO     | pgrp: 49518
[2026-03-10 15:13:04] 2026-03-10 14:10:03,864 | INFO     | corecount: 4
[2026-03-10 15:13:04] 2026-03-10 14:10:03,864 | INFO     | event service: False
[2026-03-10 15:13:04] 2026-03-10 14:10:03,864 | INFO     | sizes: {0: 2279865, 1: 2280326, 11: 2280326, 6490: 2307458, 6492: 2316478, 6496: 2316534, 6499: 2316856}
[2026-03-10 15:13:04] 2026-03-10 14:10:03,865 | INFO     | --------------------------------------------------
[2026-03-10 15:13:04] 2026-03-10 14:10:03,865 | INFO     | 
[2026-03-10 15:13:04] 2026-03-10 14:10:03,865 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot76/slots/2
[2026-03-10 15:13:04] 2026-03-10 14:10:03,882 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 15:13:04] 2026-03-10 14:10:03,883 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 15:13:04] 2026-03-10 14:10:03,883 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 15:13:04] 2026-03-10 14:10:03,883 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 15:13:04] 2026-03-10 14:10:03,883 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 15:13:04] 2026-03-10 14:10:03,883 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 15:13:04] 2026-03-10 14:10:03,883 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 15:13:04] 2026-03-10 14:10:03,883 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 15:13:04] 2026-03-10 14:10:03,883 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 15:13:04] 2026-03-10 14:10:03,883 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 15:13:04] 2026-03-10 14:10:03,883 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 15:13:04] 2026-03-10 14:10:03,883 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 15:13:04] 2026-03-10 14:10:03,883 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 15:13:04] 2026-03-10 14:10:03,883 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 15:13:04] 2026-03-10 14:10:03,883 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 15:13:04] 2026-03-10 14:10:03,883 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 15:13:04] 2026-03-10 14:10:03,883 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 15:13:04] 2026-03-10 14:10:03,883 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 15:13:04] 2026-03-10 14:10:03,883 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 15:13:04] 2026-03-10 14:10:03,883 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 15:13:04] 2026-03-10 14:10:03,883 | INFO     | job 7047192152 has completed (purged errors)
[2026-03-10 15:13:04] 2026-03-10 14:10:03,883 | INFO     | overall cleanup function is called
[2026-03-10 15:13:04] 2026-03-10 14:10:04,890 | INFO     | --- collectZombieJob: --- 10, [49518]
[2026-03-10 15:13:04] 2026-03-10 14:10:04,890 | INFO     | zombie collector waiting for pid 49518
[2026-03-10 15:13:04] 2026-03-10 14:10:04,890 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 15:13:04] 2026-03-10 14:10:04,890 | INFO     | collected zombie processes
[2026-03-10 15:13:04] 2026-03-10 14:10:04,890 | INFO     | will attempt to kill all subprocesses of pid=49518
[2026-03-10 15:13:04] 2026-03-10 14:10:05,348 | INFO     | process IDs to be killed: [49518] (in reverse order)
[2026-03-10 15:13:04] 2026-03-10 14:10:05,569 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 15:13:04] 2026-03-10 14:10:05,569 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 15:13:04] 2026-03-10 14:10:05,599 | INFO     | did not find any defunct processes belonging to 49518
[2026-03-10 15:13:04] 2026-03-10 14:10:05,627 | INFO     | did not find any defunct processes belonging to 49518
[2026-03-10 15:13:04] 2026-03-10 14:10:05,627 | INFO     | ready for new job
[2026-03-10 15:13:04] 2026-03-10 14:10:05,628 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 15:13:04] 2026-03-10 14:10:05,629 | INFO     | **************************************
[2026-03-10 15:13:04] 2026-03-10 14:10:05,629 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 15:13:04] 2026-03-10 14:10:05,629 | INFO     | **************************************
[2026-03-10 15:13:04] 2026-03-10 14:10:05,629 | INFO     | 
[2026-03-10 15:13:04] 2026-03-10 14:10:05,634 | INFO     | architecture information:
[2026-03-10 15:13:04] 2026-03-10 14:10:05,635 | INFO     | executing command: cat /etc/os-release
[2026-03-10 15:13:04] 2026-03-10 14:10:05,650 | INFO     | cat /etc/os-release:
[2026-03-10 15:13:04] NAME="CentOS Linux"
[2026-03-10 15:13:04] VERSION="7 (Core)"
[2026-03-10 15:13:04] ID="centos"
[2026-03-10 15:13:04] ID_LIKE="rhel fedora"
[2026-03-10 15:13:04] VERSION_ID="7"
[2026-03-10 15:13:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 15:13:04] ANSI_COLOR="0;31"
[2026-03-10 15:13:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 15:13:04] HOME_URL="https://www.centos.org/"
[2026-03-10 15:13:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 15:13:04] 
[2026-03-10 15:13:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 15:13:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 15:13:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 15:13:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 15:13:04] 
[2026-03-10 15:13:04] 2026-03-10 14:10:05,650 | INFO     | **************************************
[2026-03-10 15:13:04] 2026-03-10 14:10:06,152 | INFO     | executing command: df -mP /var/lib/boinc/var/slot76/slots/2
[2026-03-10 15:13:04] 2026-03-10 14:10:06,168 | INFO     | sufficient remaining disk space (20447232000 B)
[2026-03-10 15:13:04] 2026-03-10 14:10:06,169 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 15:13:04] 2026-03-10 14:10:06,169 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 15:13:04] 2026-03-10 14:10:06,169 | INFO     | update_server=False
[2026-03-10 15:13:04] 2026-03-10 14:10:06,169 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 15:13:04] 2026-03-10 14:10:06,169 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 15:13:04] 2026-03-10 14:10:06,169 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 15:13:04] 2026-03-10 14:10:06,169 | INFO     | aborting loop
[2026-03-10 15:13:04] 2026-03-10 14:10:06,463 | INFO     | all data control threads have been joined
[2026-03-10 15:13:04] 2026-03-10 14:10:06,553 | INFO     | all payload control threads have been joined
[2026-03-10 15:13:04] 2026-03-10 14:10:06,824 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 15:13:04] 2026-03-10 14:10:07,174 | INFO     | [job] retrieve thread has finished
[2026-03-10 15:13:04] 2026-03-10 14:10:07,174 | INFO     | [job] job monitor thread has finished
[2026-03-10 15:13:04] 2026-03-10 14:10:07,345 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 15:13:04] 2026-03-10 14:10:07,413 | INFO     | [data] copytool_in thread has finished
[2026-03-10 15:13:04] 2026-03-10 14:10:07,468 | INFO     | [data] control thread has finished
[2026-03-10 15:13:04] 2026-03-10 14:10:07,558 | INFO     | [payload] control thread has finished
[2026-03-10 15:13:04] 2026-03-10 14:10:07,605 | INFO     | all job control threads have been joined
[2026-03-10 15:13:04] 2026-03-10 14:10:07,624 | INFO     | [payload] validate_post thread has finished
[2026-03-10 15:13:04] 2026-03-10 14:10:07,873 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 15:13:04] 2026-03-10 14:10:08,174 | INFO     | [data] copytool_out thread has finished
[2026-03-10 15:13:04] 2026-03-10 14:10:08,215 | INFO     | [payload] failed_post thread has finished
[2026-03-10 15:13:04] 2026-03-10 14:10:08,373 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 15:13:04] 2026-03-10 14:10:08,610 | INFO     | [job] control thread has finished
[2026-03-10 15:13:04] 2026-03-10 14:10:08,644 | INFO     | [job] validate thread has finished
[2026-03-10 15:13:04] 2026-03-10 14:10:08,664 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 15:13:04] 2026-03-10 14:10:08,874 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 15:13:04] 2026-03-10 14:10:09,879 | INFO     | [job] queue monitor thread has finished
[2026-03-10 15:13:04] 2026-03-10 14:10:10,830 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 15:13:04] 2026-03-10 14:10:37,490 | INFO     | PID=43663 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-10 15:13:04] 2026-03-10 14:10:37,490 | INFO     | .. there are 44 such processes running
[2026-03-10 15:13:04] 2026-03-10 14:10:37,491 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 15:13:04] 2026-03-10 14:10:37,491 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 15:13:04] 2026-03-10 14:10:37,491 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 15:13:04] 2026-03-10 14:10:44,833 | INFO     | [monitor] cgroup control has ended
[2026-03-10 15:13:04] 2026-03-10 14:10:45,605 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23390483978048)>', '<ExcThread(monitor, started 23390242215680)>']
[2026-03-10 15:13:04] 2026-03-10 14:10:46,536 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 15:13:04] 2026-03-10 14:10:46,536 | INFO     | [monitor] control thread has ended
[2026-03-10 15:13:04] 2026-03-10 14:10:50,630 | INFO     | all workflow threads have been joined
[2026-03-10 15:13:04] 2026-03-10 14:10:50,630 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 15:13:04] 2026-03-10 14:10:50,630 | INFO     | traces error code: 0
[2026-03-10 15:13:04] 2026-03-10 14:10:50,630 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 15:13:04] 2026-03-10 14:10:50,851 [wrapper] ==== pilot stdout END ====
[2026-03-10 15:13:04] 2026-03-10 14:10:50,853 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 15:13:04] 2026-03-10 14:10:50,855 [wrapper] pilotpid: 43663
[2026-03-10 15:13:04] 2026-03-10 14:10:50,857 [wrapper] Pilot exit status: 0
[2026-03-10 15:13:04] 2026-03-10 14:10:50,866 [wrapper] pandaids: 7047192152
[2026-03-10 15:13:04] 2026-03-10 14:10:50,997 [wrapper] cleanup supervisor_pilot  920016 43664
[2026-03-10 15:13:04] 2026-03-10 14:10:50,999 [wrapper] Test setup, not cleaning
[2026-03-10 15:13:04] 2026-03-10 14:10:51,002 [wrapper] apfmon messages muted
[2026-03-10 15:13:04] 2026-03-10 14:10:51,005 [wrapper] ==== wrapper stdout END ====
[2026-03-10 15:13:04] 2026-03-10 14:10:51,007 [wrapper] ==== wrapper stderr END ====
[2026-03-10 15:13:04]  *** Error codes and diagnostics ***
[2026-03-10 15:13:04]     "exeErrorCode": 0,
[2026-03-10 15:13:04]     "exeErrorDiag": "",
[2026-03-10 15:13:04]     "pilotErrorCode": 0,
[2026-03-10 15:13:04]     "pilotErrorDiag": "",
[2026-03-10 15:13:04]  *** Listing of results directory ***
[2026-03-10 15:13:04] total 559276
[2026-03-10 15:13:04] -rw-r--r--. 1 boinc boinc    584627 Mar  9 11:57 pilot3.tar.gz
[2026-03-10 15:13:04] -rwx------. 1 boinc boinc     36322 Mar  9 11:59 runpilot2-wrapper.sh
[2026-03-10 15:13:04] -rw-r--r--. 1 boinc boinc      5111 Mar  9 12:01 queuedata.json
[2026-03-10 15:13:04] -rw-r--r--. 1 boinc boinc       100 Mar 10 13:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 15:13:04] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 13:21 run_atlas
[2026-03-10 15:13:04] -rw-r--r--. 1 boinc boinc       105 Mar 10 13:21 job.xml
[2026-03-10 15:13:04] -rw-r--r--. 1 boinc boinc      6707 Mar 10 13:21 init_data.xml
[2026-03-10 15:13:04] -rw-r--r--. 2 boinc boinc 326685953 Mar 10 13:21 EVNT.48998020._000049.pool.root.1
[2026-03-10 15:13:04] -rw-r--r--. 2 boinc boinc     15845 Mar 10 13:21 start_atlas.sh
[2026-03-10 15:13:04] drwxrwx--x. 2 boinc boinc      4096 Mar 10 13:21 shared
[2026-03-10 15:13:04] -rw-r--r--. 2 boinc boinc    597965 Mar 10 13:21 input.tar.gz
[2026-03-10 15:13:04] -rw-r--r--. 1 boinc boinc         0 Mar 10 13:21 boinc_lockfile
[2026-03-10 15:13:04] -rw-r--r--. 1 boinc boinc      2611 Mar 10 13:21 pandaJob.out
[2026-03-10 15:13:04] -rw-------. 1 boinc boinc   1005423 Mar 10 13:21 agis_schedconf.cvmfs.json
[2026-03-10 15:13:04] -rw-------. 1 boinc boinc   1511578 Mar 10 13:21 agis_ddmendpoints.agis.ALL.json
[2026-03-10 15:13:04] -rw-------. 1 boinc boinc       441 Mar 10 13:21 workernode_map.json
[2026-03-10 15:13:04] drwx------. 5 boinc boinc      4096 Mar 10 13:21 pilot3
[2026-03-10 15:13:04] -rw-------. 1 boinc boinc 239611157 Mar 10 15:09 HITS.48998022._001223.pool.root.1
[2026-03-10 15:13:04] -rw-r--r--. 1 boinc boinc       529 Mar 10 15:09 boinc_task_state.xml
[2026-03-10 15:13:04] -rw-------. 1 boinc boinc      1030 Mar 10 15:09 memory_monitor_summary.json
[2026-03-10 15:13:04] -rw-------. 1 boinc boinc    299173 Mar 10 15:09 log.48998022._001223.job.log.tgz.1
[2026-03-10 15:13:04] -rw-------. 1 boinc boinc      6347 Mar 10 15:10 heartbeat.json
[2026-03-10 15:13:04] -rw-------. 1 boinc boinc        95 Mar 10 15:10 pilot_heartbeat.json
[2026-03-10 15:13:04] -rw-------. 1 boinc boinc      4827 Mar 10 15:10 pilotlog.txt
[2026-03-10 15:13:04] -rw-------. 1 boinc boinc    932911 Mar 10 15:10 log.48998022._001223.job.log.1
[2026-03-10 15:13:04] -rw-------. 1 boinc boinc       357 Mar 10 15:10 output.list
[2026-03-10 15:13:04] -rw-r--r--. 1 boinc boinc       620 Mar 10 15:10 runtime_log
[2026-03-10 15:13:04] -rw-------. 1 boinc boinc   1249280 Mar 10 15:10 result.tar.gz
[2026-03-10 15:13:04] -rw-r--r--. 1 boinc boinc      9204 Mar 10 15:10 runtime_log.err
[2026-03-10 15:13:04] -rw-------. 1 boinc boinc       662 Mar 10 15:10 oC3MDmWVnJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmMGcLDmzyIh2n.diag
[2026-03-10 15:13:04] -rw-r--r--. 1 boinc boinc        27 Mar 10 15:12 wrapper_checkpoint.txt
[2026-03-10 15:13:04] -rw-r--r--. 1 boinc boinc      8192 Mar 10 15:13 boinc_mmap_file
[2026-03-10 15:13:04] -rw-r--r--. 1 boinc boinc     20886 Mar 10 15:13 stderr.txt
[2026-03-10 15:13:04] HITS file was successfully produced:
[2026-03-10 15:13:04] -rw-------. 1 boinc boinc 239611157 Mar 10 15:09 shared/HITS.pool.root.1
[2026-03-10 15:13:04]  *** Contents of shared directory: ***
[2026-03-10 15:13:04] total 554856
[2026-03-10 15:13:04] -rw-r--r--. 2 boinc boinc 326685953 Mar 10 13:21 ATLAS.root_0
[2026-03-10 15:13:04] -rw-r--r--. 2 boinc boinc     15845 Mar 10 13:21 start_atlas.sh
[2026-03-10 15:13:04] -rw-r--r--. 2 boinc boinc    597965 Mar 10 13:21 input.tar.gz
[2026-03-10 15:13:04] -rw-------. 1 boinc boinc 239611157 Mar 10 15:09 HITS.pool.root.1
[2026-03-10 15:13:04] -rw-------. 1 boinc boinc   1249280 Mar 10 15:10 result.tar.gz
15:13:05 (39098): run_atlas exited; CPU time 25044.606205
15:13:05 (39098): called boinc_finish(0)

</stderr_txt>
]]>

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