Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:41:29 (2533049): wrapper (7.7.26015): starting
02:41:29 (2533049): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 02:41:29] Arguments: --nthreads 4
[2026-03-10 02:41:29] Threads: 4
[2026-03-10 02:41:29] Checking for CVMFS
[2026-03-10 02:41:29] No cvmfs_config command found, will try listing directly
[2026-03-10 02:41:29] CVMFS is ok
[2026-03-10 02:41:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 02:41:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 02:41:29] Further information can be found at the LHC@home message board.
[2026-03-10 02:41:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 02:41:29] Checking for apptainer binary...
[2026-03-10 02:41:29] which: no apptainer in ((null))
[2026-03-10 02:41:29] apptainer is not installed, using version from CVMFS
[2026-03-10 02:41:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 02:41:29] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot40/slots/8/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-10 02:41:29] apptainer works
[2026-03-10 02:41:29] Set ATHENA_PROC_NUMBER=4
[2026-03-10 02:41:29] Set ATHENA_CORE_NUMBER=4
[2026-03-10 02:41:29] Starting ATLAS job with PandaID=7047192265
[2026-03-10 02:41:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot40/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 04:34:00]  *** The last 200 lines of the pilot log: ***
[2026-03-10 04:34:00] 2026-03-10 03:33:25,200 | INFO     | job 7047192265 has finished - writing final server update
[2026-03-10 04:34:00] 2026-03-10 03:33:25,201 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3242934/.job.ad'
[2026-03-10 04:34:00] 2026-03-10 03:33:25,201 | INFO     | total number of processed events: 400 (read)
[2026-03-10 04:34:00] 2026-03-10 03:33:25,219 | INFO     | using path: /var/lib/boinc/var/slot40/slots/8/PanDA_Pilot-7047192265/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 04:34:00] 2026-03-10 03:33:25,219 | INFO     | extracted standard info from prmon json
[2026-03-10 04:34:00] 2026-03-10 03:33:25,219 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 04:34:00] 2026-03-10 03:33:25,219 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 04:34:00] 2026-03-10 03:33:25,219 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 04:34:00] 2026-03-10 03:33:25,219 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 04:34:00] 2026-03-10 03:33:25,221 | INFO     | fitting pss+swap vs Time
[2026-03-10 04:34:00] 2026-03-10 03:33:25,221 | INFO     | sum of square deviations: 412686807.5
[2026-03-10 04:34:00] 2026-03-10 03:33:25,221 | INFO     | sum of deviations: 12379428755.0
[2026-03-10 04:34:00] 2026-03-10 03:33:25,221 | INFO     | mean x: 1773110250.5
[2026-03-10 04:34:00] 2026-03-10 03:33:25,221 | INFO     | mean y: 2312178.8545454545
[2026-03-10 04:34:00] 2026-03-10 03:33:25,221 | INFO     | intersect: -53185944925.353836
[2026-03-10 04:34:00] 2026-03-10 03:33:25,221 | INFO     | chi2: 1.118764590361684
[2026-03-10 04:34:00] 2026-03-10 03:33:25,222 | INFO     | sum of square deviations: 358927660.0
[2026-03-10 04:34:00] 2026-03-10 03:33:25,222 | INFO     | sum of deviations: 11650505656.000002
[2026-03-10 04:34:00] 2026-03-10 03:33:25,222 | INFO     | mean x: 1773110098.0
[2026-03-10 04:34:00] 2026-03-10 03:33:25,222 | INFO     | mean y: 2310110.4476190475
[2026-03-10 04:34:00] 2026-03-10 03:33:25,222 | INFO     | intersect: -57551429897.942154
[2026-03-10 04:34:00] 2026-03-10 03:33:25,222 | INFO     | chi2: 1.1204221979613895
[2026-03-10 04:34:00] 2026-03-10 03:33:25,222 | INFO     | current chi2=1.1204221979613895 (change=-0.1481641101252205 %)
[2026-03-10 04:34:00] 2026-03-10 03:33:25,222 | INFO     | right removable region: 104
[2026-03-10 04:34:00] 2026-03-10 03:33:25,222 | INFO     | sum of square deviations: 358927660.0
[2026-03-10 04:34:00] 2026-03-10 03:33:25,222 | INFO     | sum of deviations: 1143709984.0000002
[2026-03-10 04:34:00] 2026-03-10 03:33:25,222 | INFO     | mean x: 1773110403.0
[2026-03-10 04:34:00] 2026-03-10 03:33:25,222 | INFO     | mean y: 2343203.4857142856
[2026-03-10 04:34:00] 2026-03-10 03:33:25,223 | INFO     | intersect: -5647608852.717935
[2026-03-10 04:34:00] 2026-03-10 03:33:25,223 | INFO     | chi2: 0.0005345178517918726
[2026-03-10 04:34:00] 2026-03-10 03:33:25,223 | INFO     | current chi2=0.0005345178517918726 (change=99.95222249109447 %)
[2026-03-10 04:34:00] 2026-03-10 03:33:25,223 | INFO     | sum of square deviations: 310052325.0
[2026-03-10 04:34:00] 2026-03-10 03:33:25,223 | INFO     | sum of deviations: 774040132.5
[2026-03-10 04:34:00] 2026-03-10 03:33:25,223 | INFO     | mean x: 1773110555.5
[2026-03-10 04:34:00] 2026-03-10 03:33:25,223 | INFO     | mean y: 2344342.13
[2026-03-10 04:34:00] 2026-03-10 03:33:25,223 | INFO     | intersect: -4424194724.514214
[2026-03-10 04:34:00] 2026-03-10 03:33:25,223 | INFO     | chi2: 0.00020626350079805582
[2026-03-10 04:34:00] 2026-03-10 03:33:25,223 | INFO     | current chi2=0.00020626350079805582 (change=61.41129803118914 %)
[2026-03-10 04:34:00] 2026-03-10 03:33:25,223 | INFO     | sum of square deviations: 265828240.0
[2026-03-10 04:34:00] 2026-03-10 03:33:25,223 | INFO     | sum of deviations: 744656767.9999999
[2026-03-10 04:34:00] 2026-03-10 03:33:25,224 | INFO     | mean x: 1773110708.0
[2026-03-10 04:34:00] 2026-03-10 03:33:25,224 | INFO     | mean y: 2344442.8421052634
[2026-03-10 04:34:00] 2026-03-10 03:33:25,224 | INFO     | intersect: -4964618018.05171
[2026-03-10 04:34:00] 2026-03-10 03:33:25,224 | INFO     | chi2: 0.000170156797146735
[2026-03-10 04:34:00] 2026-03-10 03:33:25,224 | INFO     | current chi2=0.000170156797146735 (change=17.505134699847567 %)
[2026-03-10 04:34:00] 2026-03-10 03:33:25,224 | INFO     | left removable region: 30
[2026-03-10 04:34:00] 2026-03-10 03:33:25,224 | INFO     | sum of square deviations: 125630262.5
[2026-03-10 04:34:00] 2026-03-10 03:33:25,224 | INFO     | sum of deviations: 461386889.5
[2026-03-10 04:34:00] 2026-03-10 03:33:25,224 | INFO     | mean x: 1773110982.5
[2026-03-10 04:34:00] 2026-03-10 03:33:25,224 | INFO     | mean y: 2344134.581081081
[2026-03-10 04:34:00] 2026-03-10 03:33:25,224 | INFO     | intersect: -6509543564.085184
[2026-03-10 04:34:00] 2026-03-10 03:33:25,224 | INFO     | chi2: 7.512073199088701e-05
[2026-03-10 04:34:00] 2026-03-10 03:33:25,224 | INFO     | current memory leak: 3.67 B/s (using 74 data points, chi2=0.00)
[2026-03-10 04:34:00] 2026-03-10 03:33:25,224 | INFO     | could have reported an average CPU frequency of 3581 MHz (7 samples)
[2026-03-10 04:34:00] 2026-03-10 03:33:25,224 | INFO     | ..............................
[2026-03-10 04:34:00] 2026-03-10 03:33:25,225 | INFO     | . Timing measurements:
[2026-03-10 04:34:00] 2026-03-10 03:33:25,225 | INFO     | . get job = 0 s
[2026-03-10 04:34:00] 2026-03-10 03:33:25,225 | INFO     | . initial setup = 5 s
[2026-03-10 04:34:00] 2026-03-10 03:33:25,225 | INFO     | . payload setup = 5 s
[2026-03-10 04:34:00] 2026-03-10 03:33:25,225 | INFO     | . stage-in = 0 s
[2026-03-10 04:34:00] 2026-03-10 03:33:25,225 | INFO     | . payload execution = 6680 s
[2026-03-10 04:34:00] 2026-03-10 03:33:25,225 | INFO     | . stage-out = 0 s
[2026-03-10 04:34:00] 2026-03-10 03:33:25,225 | INFO     | . log creation = 0 s
[2026-03-10 04:34:00] 2026-03-10 03:33:25,225 | INFO     | ..............................
[2026-03-10 04:34:00] 2026-03-10 03:33:25,271 | INFO     | 
[2026-03-10 04:34:00] 2026-03-10 03:33:25,272 | INFO     | job summary report
[2026-03-10 04:34:00] 2026-03-10 03:33:25,272 | INFO     | --------------------------------------------------
[2026-03-10 04:34:00] 2026-03-10 03:33:25,272 | INFO     | PanDA job id: 7047192265
[2026-03-10 04:34:00] 2026-03-10 03:33:25,272 | INFO     | task id: 48998022
[2026-03-10 04:34:00] 2026-03-10 03:33:25,272 | INFO     | errors: (none)
[2026-03-10 04:34:00] 2026-03-10 03:33:25,272 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 04:34:00] 2026-03-10 03:33:25,272 | INFO     | pilot state: finished 
[2026-03-10 04:34:00] 2026-03-10 03:33:25,272 | INFO     | transexitcode: 0
[2026-03-10 04:34:00] 2026-03-10 03:33:25,272 | INFO     | exeerrorcode: 0
[2026-03-10 04:34:00] 2026-03-10 03:33:25,272 | INFO     | exeerrordiag: 
[2026-03-10 04:34:00] 2026-03-10 03:33:25,272 | INFO     | exitcode: 0
[2026-03-10 04:34:00] 2026-03-10 03:33:25,272 | INFO     | exitmsg: OK
[2026-03-10 04:34:00] 2026-03-10 03:33:25,272 | INFO     | cpuconsumptiontime: 25535 s
[2026-03-10 04:34:00] 2026-03-10 03:33:25,272 | INFO     | nevents: 400
[2026-03-10 04:34:00] 2026-03-10 03:33:25,272 | INFO     | neventsw: 0
[2026-03-10 04:34:00] 2026-03-10 03:33:25,272 | INFO     | pid: 2543441
[2026-03-10 04:34:00] 2026-03-10 03:33:25,272 | INFO     | pgrp: 2543441
[2026-03-10 04:34:00] 2026-03-10 03:33:25,272 | INFO     | corecount: 4
[2026-03-10 04:34:00] 2026-03-10 03:33:25,272 | INFO     | event service: False
[2026-03-10 04:34:00] 2026-03-10 03:33:25,272 | INFO     | sizes: {0: 2279865, 1: 2280326, 11: 2280326, 6689: 2307544, 6690: 2316620, 6691: 2316758}
[2026-03-10 04:34:00] 2026-03-10 03:33:25,272 | INFO     | --------------------------------------------------
[2026-03-10 04:34:00] 2026-03-10 03:33:25,272 | INFO     | 
[2026-03-10 04:34:00] 2026-03-10 03:33:25,273 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot40/slots/8
[2026-03-10 04:34:00] 2026-03-10 03:33:25,290 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 04:34:00] 2026-03-10 03:33:25,290 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 04:34:00] 2026-03-10 03:33:25,290 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 04:34:00] 2026-03-10 03:33:25,290 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 04:34:00] 2026-03-10 03:33:25,290 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 04:34:00] 2026-03-10 03:33:25,290 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 04:34:00] 2026-03-10 03:33:25,291 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 04:34:00] 2026-03-10 03:33:25,291 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 04:34:00] 2026-03-10 03:33:25,291 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 04:34:00] 2026-03-10 03:33:25,291 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 04:34:00] 2026-03-10 03:33:25,291 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 04:34:00] 2026-03-10 03:33:25,291 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 04:34:00] 2026-03-10 03:33:25,291 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 04:34:00] 2026-03-10 03:33:25,291 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 04:34:00] 2026-03-10 03:33:25,291 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 04:34:00] 2026-03-10 03:33:25,291 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 04:34:00] 2026-03-10 03:33:25,291 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 04:34:00] 2026-03-10 03:33:25,291 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 04:34:00] 2026-03-10 03:33:25,291 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 04:34:00] 2026-03-10 03:33:25,291 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 04:34:00] 2026-03-10 03:33:25,291 | INFO     | job 7047192265 has completed (purged errors)
[2026-03-10 04:34:00] 2026-03-10 03:33:25,291 | INFO     | overall cleanup function is called
[2026-03-10 04:34:00] 2026-03-10 03:33:26,297 | INFO     | --- collectZombieJob: --- 10, [2543441]
[2026-03-10 04:34:00] 2026-03-10 03:33:26,298 | INFO     | zombie collector waiting for pid 2543441
[2026-03-10 04:34:00] 2026-03-10 03:33:26,298 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 04:34:00] 2026-03-10 03:33:26,298 | INFO     | collected zombie processes
[2026-03-10 04:34:00] 2026-03-10 03:33:26,298 | INFO     | will attempt to kill all subprocesses of pid=2543441
[2026-03-10 04:34:00] 2026-03-10 03:33:26,748 | INFO     | process IDs to be killed: [2543441] (in reverse order)
[2026-03-10 04:34:00] 2026-03-10 03:33:26,990 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 04:34:00] 2026-03-10 03:33:26,990 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 04:34:00] 2026-03-10 03:33:27,025 | INFO     | did not find any defunct processes belonging to 2543441
[2026-03-10 04:34:00] 2026-03-10 03:33:27,048 | INFO     | did not find any defunct processes belonging to 2543441
[2026-03-10 04:34:00] 2026-03-10 03:33:27,048 | INFO     | ready for new job
[2026-03-10 04:34:00] 2026-03-10 03:33:27,048 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 04:34:00] 2026-03-10 03:33:27,050 | INFO     | **************************************
[2026-03-10 04:34:00] 2026-03-10 03:33:27,050 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 04:34:00] 2026-03-10 03:33:27,050 | INFO     | **************************************
[2026-03-10 04:34:00] 2026-03-10 03:33:27,050 | INFO     | 
[2026-03-10 04:34:00] 2026-03-10 03:33:27,055 | INFO     | architecture information:
[2026-03-10 04:34:00] 2026-03-10 03:33:27,056 | INFO     | executing command: cat /etc/os-release
[2026-03-10 04:34:00] 2026-03-10 03:33:27,071 | INFO     | cat /etc/os-release:
[2026-03-10 04:34:00] NAME="CentOS Linux"
[2026-03-10 04:34:00] VERSION="7 (Core)"
[2026-03-10 04:34:00] ID="centos"
[2026-03-10 04:34:00] ID_LIKE="rhel fedora"
[2026-03-10 04:34:00] VERSION_ID="7"
[2026-03-10 04:34:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 04:34:00] ANSI_COLOR="0;31"
[2026-03-10 04:34:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 04:34:00] HOME_URL="https://www.centos.org/"
[2026-03-10 04:34:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 04:34:00] 
[2026-03-10 04:34:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 04:34:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 04:34:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 04:34:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 04:34:00] 
[2026-03-10 04:34:00] 2026-03-10 03:33:27,071 | INFO     | **************************************
[2026-03-10 04:34:00] 2026-03-10 03:33:27,574 | INFO     | executing command: df -mP /var/lib/boinc/var/slot40/slots/8
[2026-03-10 04:34:00] 2026-03-10 03:33:27,591 | INFO     | sufficient remaining disk space (20436746240 B)
[2026-03-10 04:34:00] 2026-03-10 03:33:27,591 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 04:34:00] 2026-03-10 03:33:27,591 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 04:34:00] 2026-03-10 03:33:27,591 | INFO     | update_server=False
[2026-03-10 04:34:00] 2026-03-10 03:33:27,591 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 04:34:00] 2026-03-10 03:33:27,592 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 04:34:00] 2026-03-10 03:33:27,986 | INFO     | all payload control threads have been joined
[2026-03-10 04:34:00] 2026-03-10 03:33:28,087 | INFO     | all data control threads have been joined
[2026-03-10 04:34:00] 2026-03-10 03:33:28,556 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 04:34:00] 2026-03-10 03:33:28,557 | INFO     | aborting loop
[2026-03-10 04:34:00] 2026-03-10 03:33:28,597 | INFO     | [job] retrieve thread has finished
[2026-03-10 04:34:00] 2026-03-10 03:33:28,644 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 04:34:00] 2026-03-10 03:33:28,721 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 04:34:00] 2026-03-10 03:33:28,811 | INFO     | all job control threads have been joined
[2026-03-10 04:34:00] 2026-03-10 03:33:28,992 | INFO     | [payload] control thread has finished
[2026-03-10 04:34:00] 2026-03-10 03:33:29,092 | INFO     | [data] control thread has finished
[2026-03-10 04:34:00] 2026-03-10 03:33:29,190 | INFO     | [data] copytool_in thread has finished
[2026-03-10 04:34:00] 2026-03-10 03:33:29,280 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 04:34:00] 2026-03-10 03:33:29,561 | INFO     | [job] job monitor thread has finished
[2026-03-10 04:34:00] 2026-03-10 03:33:29,581 | INFO     | [payload] validate_post thread has finished
[2026-03-10 04:34:00] 2026-03-10 03:33:29,596 | INFO     | [data] copytool_out thread has finished
[2026-03-10 04:34:00] 2026-03-10 03:33:29,816 | INFO     | [job] control thread has finished
[2026-03-10 04:34:00] 2026-03-10 03:33:29,927 | INFO     | [payload] failed_post thread has finished
[2026-03-10 04:34:00] 2026-03-10 03:33:30,077 | INFO     | [job] validate thread has finished
[2026-03-10 04:34:00] 2026-03-10 03:33:30,281 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 04:34:00] 2026-03-10 03:33:30,413 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 04:34:00] 2026-03-10 03:33:31,286 | INFO     | [job] queue monitor thread has finished
[2026-03-10 04:34:00] 2026-03-10 03:33:34,418 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 04:34:00] 2026-03-10 03:33:38,565 | INFO     | job.realtimelogging is not enabled
[2026-03-10 04:34:00] 2026-03-10 03:33:39,570 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 04:34:00] 2026-03-10 03:33:54,149 | INFO     | [monitor] cgroup control has ended
[2026-03-10 04:34:00] 2026-03-10 03:33:54,743 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23153757058880)>', '<ExcThread(monitor, started 23153513596672)>']
[2026-03-10 04:34:00] 2026-03-10 03:33:58,514 | INFO     | PID=2537601 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 04:34:00] 2026-03-10 03:33:58,514 | INFO     | .. there are 63 such processes running
[2026-03-10 04:34:00] 2026-03-10 03:33:58,515 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 04:34:00] 2026-03-10 03:33:58,515 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 04:34:00] 2026-03-10 03:33:58,515 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 04:34:00] 2026-03-10 03:33:58,515 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 04:34:00] 2026-03-10 03:33:58,515 | INFO     | [monitor] control thread has ended
[2026-03-10 04:34:00] 2026-03-10 03:33:59,768 | INFO     | all workflow threads have been joined
[2026-03-10 04:34:00] 2026-03-10 03:33:59,769 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 04:34:00] 2026-03-10 03:33:59,769 | INFO     | traces error code: 0
[2026-03-10 04:34:00] 2026-03-10 03:33:59,769 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 04:34:00] 2026-03-10 03:33:59,888 [wrapper] ==== pilot stdout END ====
[2026-03-10 04:34:00] 2026-03-10 03:33:59,891 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 04:34:00] 2026-03-10 03:33:59,894 [wrapper] pilotpid: 2537601
[2026-03-10 04:34:00] 2026-03-10 03:33:59,896 [wrapper] Pilot exit status: 0
[2026-03-10 04:34:00] 2026-03-10 03:33:59,906 [wrapper] pandaids: 7047192265
[2026-03-10 04:34:00] 2026-03-10 03:34:00,013 [wrapper] cleanup supervisor_pilot 3728231 2537602
[2026-03-10 04:34:00] 2026-03-10 03:34:00,016 [wrapper] Test setup, not cleaning
[2026-03-10 04:34:00] 2026-03-10 03:34:00,018 [wrapper] apfmon messages muted
[2026-03-10 04:34:00] 2026-03-10 03:34:00,020 [wrapper] ==== wrapper stdout END ====
[2026-03-10 04:34:00] 2026-03-10 03:34:00,022 [wrapper] ==== wrapper stderr END ====
[2026-03-10 04:34:00]  *** Error codes and diagnostics ***
[2026-03-10 04:34:00]     "exeErrorCode": 0,
[2026-03-10 04:34:00]     "exeErrorDiag": "",
[2026-03-10 04:34:00]     "pilotErrorCode": 0,
[2026-03-10 04:34:00]     "pilotErrorDiag": "",
[2026-03-10 04:34:00]  *** Listing of results directory ***
[2026-03-10 04:34:00] total 566752
[2026-03-10 04:34:00] -rw-r--r--. 1 boinc boinc    584627 Mar  9 11:57 pilot3.tar.gz
[2026-03-10 04:34:00] -rwx------. 1 boinc boinc     36322 Mar  9 11:59 runpilot2-wrapper.sh
[2026-03-10 04:34:00] -rw-r--r--. 1 boinc boinc      5111 Mar  9 12:01 queuedata.json
[2026-03-10 04:34:00] -rw-r--r--. 1 boinc boinc       100 Mar 10 02:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 04:34:00] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 02:41 run_atlas
[2026-03-10 04:34:00] -rw-r--r--. 1 boinc boinc       105 Mar 10 02:41 job.xml
[2026-03-10 04:34:00] -rw-r--r--. 2 boinc boinc 332323011 Mar 10 02:41 EVNT.48998020._000050.pool.root.1
[2026-03-10 04:34:00] -rw-r--r--. 2 boinc boinc     15845 Mar 10 02:41 start_atlas.sh
[2026-03-10 04:34:00] drwxrwx--x. 2 boinc boinc      4096 Mar 10 02:41 shared
[2026-03-10 04:34:00] -rw-r--r--. 2 boinc boinc    597953 Mar 10 02:41 input.tar.gz
[2026-03-10 04:34:00] -rw-r--r--. 1 boinc boinc      6705 Mar 10 02:41 init_data.xml
[2026-03-10 04:34:00] -rw-r--r--. 1 boinc boinc         0 Mar 10 02:41 boinc_lockfile
[2026-03-10 04:34:00] -rw-r--r--. 1 boinc boinc      2611 Mar 10 02:41 pandaJob.out
[2026-03-10 04:34:00] -rw-------. 1 boinc boinc   1002338 Mar 10 02:41 agis_schedconf.cvmfs.json
[2026-03-10 04:34:00] -rw-------. 1 boinc boinc   1511578 Mar 10 02:41 agis_ddmendpoints.agis.ALL.json
[2026-03-10 04:34:00] -rw-------. 1 boinc boinc       444 Mar 10 02:41 workernode_map.json
[2026-03-10 04:34:00] drwx------. 5 boinc boinc      4096 Mar 10 02:41 pilot3
[2026-03-10 04:34:00] -rw-------. 1 boinc boinc 241566304 Mar 10 04:32 HITS.48998022._001243.pool.root.1
[2026-03-10 04:34:00] -rw-r--r--. 1 boinc boinc       529 Mar 10 04:33 boinc_task_state.xml
[2026-03-10 04:34:00] -rw-------. 1 boinc boinc      1031 Mar 10 04:33 memory_monitor_summary.json
[2026-03-10 04:34:00] -rw-------. 1 boinc boinc    300699 Mar 10 04:33 log.48998022._001243.job.log.tgz.1
[2026-03-10 04:34:00] -rw-------. 1 boinc boinc      6347 Mar 10 04:33 heartbeat.json
[2026-03-10 04:34:00] -rw-r--r--. 1 boinc boinc        27 Mar 10 04:33 wrapper_checkpoint.txt
[2026-03-10 04:34:00] -rw-r--r--. 1 boinc boinc      8192 Mar 10 04:33 boinc_mmap_file
[2026-03-10 04:34:00] -rw-------. 1 boinc boinc        95 Mar 10 04:33 pilot_heartbeat.json
[2026-03-10 04:34:00] -rw-------. 1 boinc boinc      4901 Mar 10 04:33 pilotlog.txt
[2026-03-10 04:34:00] -rw-------. 1 boinc boinc    965116 Mar 10 04:34 log.48998022._001243.job.log.1
[2026-03-10 04:34:00] -rw-------. 1 boinc boinc       357 Mar 10 04:34 output.list
[2026-03-10 04:34:00] -rw-r--r--. 1 boinc boinc       620 Mar 10 04:34 runtime_log
[2026-03-10 04:34:00] -rw-------. 1 boinc boinc   1280000 Mar 10 04:34 result.tar.gz
[2026-03-10 04:34:00] -rw-r--r--. 1 boinc boinc      9204 Mar 10 04:34 runtime_log.err
[2026-03-10 04:34:00] -rw-------. 1 boinc boinc       663 Mar 10 04:34 b90LDmdVnJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmjaZLDmZVmBJn.diag
[2026-03-10 04:34:00] -rw-r--r--. 1 boinc boinc     20872 Mar 10 04:34 stderr.txt
[2026-03-10 04:34:00] HITS file was successfully produced:
[2026-03-10 04:34:00] -rw-------. 1 boinc boinc 241566304 Mar 10 04:32 shared/HITS.pool.root.1
[2026-03-10 04:34:00]  *** Contents of shared directory: ***
[2026-03-10 04:34:00] total 562304
[2026-03-10 04:34:00] -rw-r--r--. 2 boinc boinc 332323011 Mar 10 02:41 ATLAS.root_0
[2026-03-10 04:34:00] -rw-r--r--. 2 boinc boinc     15845 Mar 10 02:41 start_atlas.sh
[2026-03-10 04:34:00] -rw-r--r--. 2 boinc boinc    597953 Mar 10 02:41 input.tar.gz
[2026-03-10 04:34:00] -rw-------. 1 boinc boinc 241566304 Mar 10 04:32 HITS.pool.root.1
[2026-03-10 04:34:00] -rw-------. 1 boinc boinc   1280000 Mar 10 04:34 result.tar.gz
04:34:01 (2533049): run_atlas exited; CPU time 25806.711106
04:34:01 (2533049): called boinc_finish(0)

</stderr_txt>
]]>

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