Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:49:48 (3519215): wrapper (7.7.26015): starting
15:49:48 (3519215): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 15:49:48] Arguments: --nthreads 4
[2026-03-09 15:49:48] Threads: 4
[2026-03-09 15:49:48] Checking for CVMFS
[2026-03-09 15:49:48] No cvmfs_config command found, will try listing directly
[2026-03-09 15:49:48] CVMFS is ok
[2026-03-09 15:49:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 15:49:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 15:49:48] Further information can be found at the LHC@home message board.
[2026-03-09 15:49:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 15:49:48] Checking for apptainer binary...
[2026-03-09 15:49:48] which: no apptainer in ((null))
[2026-03-09 15:49:48] apptainer is not installed, using version from CVMFS
[2026-03-09 15:49:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 15:49:48] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot24/slots/6/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-09 15:49:48] apptainer works
[2026-03-09 15:49:48] Set ATHENA_PROC_NUMBER=4
[2026-03-09 15:49:48] Set ATHENA_CORE_NUMBER=4
[2026-03-09 15:49:48] Starting ATLAS job with PandaID=7047190665
[2026-03-09 15:49:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot24/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 17:37:17]  *** The last 200 lines of the pilot log: ***
[2026-03-09 17:37:17] 2026-03-09 16:36:22,917 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 17:37:17] 2026-03-09 16:36:22,917 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 17:37:17] 2026-03-09 16:36:22,917 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 17:37:17] 2026-03-09 16:36:22,917 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 17:37:17] 2026-03-09 16:36:22,918 | INFO     | fitting pss+swap vs Time
[2026-03-09 17:37:17] 2026-03-09 16:36:22,918 | INFO     | sum of square deviations: 358927660.0
[2026-03-09 17:37:17] 2026-03-09 16:36:22,919 | INFO     | sum of deviations: 4534737925.999997
[2026-03-09 17:37:17] 2026-03-09 16:36:22,922 | INFO     | mean x: 1773070994.0
[2026-03-09 17:37:17] 2026-03-09 16:36:22,922 | INFO     | mean y: 2292137.5142857144
[2026-03-09 17:37:17] 2026-03-09 16:36:22,922 | INFO     | intersect: -22398913392.263813
[2026-03-09 17:37:17] 2026-03-09 16:36:22,922 | INFO     | chi2: 1.9361024087479834
[2026-03-09 17:37:17] 2026-03-09 16:36:22,922 | INFO     | sum of square deviations: 310052325.0
[2026-03-09 17:37:17] 2026-03-09 16:36:22,922 | INFO     | sum of deviations: 10722768093.5
[2026-03-09 17:37:17] 2026-03-09 16:36:22,922 | INFO     | mean x: 1773070841.5
[2026-03-09 17:37:17] 2026-03-09 16:36:22,922 | INFO     | mean y: 2310647.95
[2026-03-09 17:37:17] 2026-03-09 16:36:22,922 | INFO     | intersect: -61317105185.33362
[2026-03-09 17:37:17] 2026-03-09 16:36:22,922 | INFO     | chi2: 1.1178925732501248
[2026-03-09 17:37:17] 2026-03-09 16:36:22,922 | INFO     | current chi2=1.1178925732501248 (change=42.26066926010227 %)
[2026-03-09 17:37:17] 2026-03-09 16:36:22,922 | INFO     | sum of square deviations: 265828240.0
[2026-03-09 17:37:17] 2026-03-09 16:36:22,923 | INFO     | sum of deviations: 10152048463.999998
[2026-03-09 17:37:17] 2026-03-09 16:36:22,923 | INFO     | mean x: 1773070689.0
[2026-03-09 17:37:17] 2026-03-09 16:36:22,923 | INFO     | mean y: 2308678.357894737
[2026-03-09 17:37:17] 2026-03-09 16:36:22,923 | INFO     | intersect: -67711714349.54113
[2026-03-09 17:37:17] 2026-03-09 16:36:22,923 | INFO     | chi2: 1.1196798278289173
[2026-03-09 17:37:17] 2026-03-09 16:36:22,923 | INFO     | current chi2=1.1196798278289173 (change=-0.1598771314488894 %)
[2026-03-09 17:37:17] 2026-03-09 16:36:22,923 | INFO     | right removable region: 94
[2026-03-09 17:37:17] 2026-03-09 16:36:22,923 | INFO     | sum of square deviations: 310052325.0
[2026-03-09 17:37:17] 2026-03-09 16:36:22,923 | INFO     | sum of deviations: -5449002205.0
[2026-03-09 17:37:17] 2026-03-09 16:36:22,923 | INFO     | mean x: 1773071146.5
[2026-03-09 17:37:17] 2026-03-09 16:36:22,923 | INFO     | mean y: 2322326.04
[2026-03-09 17:37:17] 2026-03-09 16:36:22,923 | INFO     | intersect: 31163090389.625328
[2026-03-09 17:37:17] 2026-03-09 16:36:22,923 | INFO     | chi2: 0.8513765286955932
[2026-03-09 17:37:17] 2026-03-09 16:36:22,923 | INFO     | current chi2=0.8513765286955932 (change=56.02626571565749 %)
[2026-03-09 17:37:17] 2026-03-09 16:36:22,924 | INFO     | sum of square deviations: 265828240.0
[2026-03-09 17:37:17] 2026-03-09 16:36:22,924 | INFO     | sum of deviations: -5457730573.0
[2026-03-09 17:37:17] 2026-03-09 16:36:22,924 | INFO     | mean x: 1773071299.0
[2026-03-09 17:37:17] 2026-03-09 16:36:22,924 | INFO     | mean y: 2322344.4
[2026-03-09 17:37:17] 2026-03-09 16:36:22,924 | INFO     | intersect: 36405322404.36776
[2026-03-09 17:37:17] 2026-03-09 16:36:22,924 | INFO     | chi2: 0.8524016998866576
[2026-03-09 17:37:17] 2026-03-09 16:36:22,924 | INFO     | current chi2=0.8524016998866576 (change=-0.12041337252215047 %)
[2026-03-09 17:37:17] 2026-03-09 16:36:22,924 | INFO     | left removable region: 20
[2026-03-09 17:37:17] 2026-03-09 16:36:22,924 | INFO     | sum of square deviations: 125630262.5
[2026-03-09 17:37:17] 2026-03-09 16:36:22,924 | INFO     | sum of deviations: 290681958.00000006
[2026-03-09 17:37:17] 2026-03-09 16:36:22,924 | INFO     | mean x: 1773071268.5
[2026-03-09 17:37:17] 2026-03-09 16:36:22,924 | INFO     | mean y: 2345754.189189189
[2026-03-09 17:37:17] 2026-03-09 16:36:22,924 | INFO     | intersect: -4100167587.3006754
[2026-03-09 17:37:17] 2026-03-09 16:36:22,924 | INFO     | chi2: 0.0001158637796817199
[2026-03-09 17:37:17] 2026-03-09 16:36:22,925 | INFO     | current memory leak: 2.31 B/s (using 74 data points, chi2=0.00)
[2026-03-09 17:37:17] 2026-03-09 16:36:22,925 | INFO     | could have reported an average CPU frequency of 3582 MHz (7 samples)
[2026-03-09 17:37:17] 2026-03-09 16:36:22,925 | INFO     | ..............................
[2026-03-09 17:37:17] 2026-03-09 16:36:22,925 | INFO     | . Timing measurements:
[2026-03-09 17:37:17] 2026-03-09 16:36:22,925 | INFO     | . get job = 0 s
[2026-03-09 17:37:17] 2026-03-09 16:36:22,925 | INFO     | . initial setup = 4 s
[2026-03-09 17:37:17] 2026-03-09 16:36:22,925 | INFO     | . payload setup = 4 s
[2026-03-09 17:37:17] 2026-03-09 16:36:22,925 | INFO     | . stage-in = 0 s
[2026-03-09 17:37:17] 2026-03-09 16:36:22,925 | INFO     | . payload execution = 6358 s
[2026-03-09 17:37:17] 2026-03-09 16:36:22,925 | INFO     | . stage-out = 0 s
[2026-03-09 17:37:17] 2026-03-09 16:36:22,925 | INFO     | . log creation = 0 s
[2026-03-09 17:37:17] 2026-03-09 16:36:22,925 | INFO     | ..............................
[2026-03-09 17:37:17] 2026-03-09 16:36:22,972 | INFO     | 
[2026-03-09 17:37:17] 2026-03-09 16:36:22,972 | INFO     | job summary report
[2026-03-09 17:37:17] 2026-03-09 16:36:22,972 | INFO     | --------------------------------------------------
[2026-03-09 17:37:17] 2026-03-09 16:36:22,972 | INFO     | PanDA job id: 7047190665
[2026-03-09 17:37:17] 2026-03-09 16:36:22,972 | INFO     | task id: 48998022
[2026-03-09 17:37:17] 2026-03-09 16:36:22,972 | INFO     | errors: (none)
[2026-03-09 17:37:17] 2026-03-09 16:36:22,972 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 17:37:17] 2026-03-09 16:36:22,972 | INFO     | pilot state: finished 
[2026-03-09 17:37:17] 2026-03-09 16:36:22,972 | INFO     | transexitcode: 0
[2026-03-09 17:37:17] 2026-03-09 16:36:22,973 | INFO     | exeerrorcode: 0
[2026-03-09 17:37:17] 2026-03-09 16:36:22,973 | INFO     | exeerrordiag: 
[2026-03-09 17:37:17] 2026-03-09 16:36:22,973 | INFO     | exitcode: 0
[2026-03-09 17:37:17] 2026-03-09 16:36:22,973 | INFO     | exitmsg: OK
[2026-03-09 17:37:17] 2026-03-09 16:36:22,973 | INFO     | cpuconsumptiontime: 24458 s
[2026-03-09 17:37:17] 2026-03-09 16:36:22,973 | INFO     | nevents: 400
[2026-03-09 17:37:17] 2026-03-09 16:36:22,973 | INFO     | neventsw: 0
[2026-03-09 17:37:17] 2026-03-09 16:36:22,973 | INFO     | pid: 3538966
[2026-03-09 17:37:17] 2026-03-09 16:36:22,973 | INFO     | pgrp: 3538966
[2026-03-09 17:37:17] 2026-03-09 16:36:22,973 | INFO     | corecount: 4
[2026-03-09 17:37:17] 2026-03-09 16:36:22,973 | INFO     | event service: False
[2026-03-09 17:37:17] 2026-03-09 16:36:22,973 | INFO     | sizes: {0: 2280294, 11: 2280294, 6366: 2307370, 6367: 2316390, 6369: 2316446, 6371: 2316640}
[2026-03-09 17:37:17] 2026-03-09 16:36:22,973 | INFO     | --------------------------------------------------
[2026-03-09 17:37:17] 2026-03-09 16:36:22,973 | INFO     | 
[2026-03-09 17:37:17] 2026-03-09 16:36:22,973 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot24/slots/6
[2026-03-09 17:37:17] 2026-03-09 16:36:22,992 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 17:37:17] 2026-03-09 16:36:22,993 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 17:37:17] 2026-03-09 16:36:22,993 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 17:37:17] 2026-03-09 16:36:22,993 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 17:37:17] 2026-03-09 16:36:22,993 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 17:37:17] 2026-03-09 16:36:22,993 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 17:37:17] 2026-03-09 16:36:22,993 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 17:37:17] 2026-03-09 16:36:22,993 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 17:37:17] 2026-03-09 16:36:22,993 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 17:37:17] 2026-03-09 16:36:22,993 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 17:37:17] 2026-03-09 16:36:22,993 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 17:37:17] 2026-03-09 16:36:22,993 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 17:37:17] 2026-03-09 16:36:22,993 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 17:37:17] 2026-03-09 16:36:22,993 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 17:37:17] 2026-03-09 16:36:22,993 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 17:37:17] 2026-03-09 16:36:22,993 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 17:37:17] 2026-03-09 16:36:22,993 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 17:37:17] 2026-03-09 16:36:22,993 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 17:37:17] 2026-03-09 16:36:22,993 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 17:37:17] 2026-03-09 16:36:22,993 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 17:37:17] 2026-03-09 16:36:22,993 | INFO     | job 7047190665 has completed (purged errors)
[2026-03-09 17:37:17] 2026-03-09 16:36:22,993 | INFO     | overall cleanup function is called
[2026-03-09 17:37:17] 2026-03-09 16:36:23,999 | INFO     | --- collectZombieJob: --- 10, [3538966]
[2026-03-09 17:37:17] 2026-03-09 16:36:24,000 | INFO     | zombie collector waiting for pid 3538966
[2026-03-09 17:37:17] 2026-03-09 16:36:24,000 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 17:37:17] 2026-03-09 16:36:24,000 | INFO     | collected zombie processes
[2026-03-09 17:37:17] 2026-03-09 16:36:24,000 | INFO     | will attempt to kill all subprocesses of pid=3538966
[2026-03-09 17:37:17] 2026-03-09 16:36:24,430 | INFO     | process IDs to be killed: [3538966] (in reverse order)
[2026-03-09 17:37:17] 2026-03-09 16:36:24,661 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 17:37:17] 2026-03-09 16:36:24,661 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 17:37:17] 2026-03-09 16:36:24,715 | INFO     | did not find any defunct processes belonging to 3538966
[2026-03-09 17:37:17] 2026-03-09 16:36:24,774 | INFO     | did not find any defunct processes belonging to 3538966
[2026-03-09 17:37:17] 2026-03-09 16:36:24,775 | INFO     | ready for new job
[2026-03-09 17:37:17] 2026-03-09 16:36:24,775 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 17:37:17] 2026-03-09 16:36:24,776 | INFO     | **************************************
[2026-03-09 17:37:17] 2026-03-09 16:36:24,776 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 17:37:17] 2026-03-09 16:36:24,776 | INFO     | **************************************
[2026-03-09 17:37:17] 2026-03-09 16:36:24,776 | INFO     | 
[2026-03-09 17:37:17] 2026-03-09 16:36:24,784 | INFO     | architecture information:
[2026-03-09 17:37:17] 2026-03-09 16:36:24,784 | INFO     | executing command: cat /etc/os-release
[2026-03-09 17:37:17] 2026-03-09 16:36:24,798 | INFO     | cat /etc/os-release:
[2026-03-09 17:37:17] NAME="CentOS Linux"
[2026-03-09 17:37:17] VERSION="7 (Core)"
[2026-03-09 17:37:17] ID="centos"
[2026-03-09 17:37:17] ID_LIKE="rhel fedora"
[2026-03-09 17:37:17] VERSION_ID="7"
[2026-03-09 17:37:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 17:37:17] ANSI_COLOR="0;31"
[2026-03-09 17:37:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 17:37:17] HOME_URL="https://www.centos.org/"
[2026-03-09 17:37:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 17:37:17] 
[2026-03-09 17:37:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 17:37:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 17:37:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 17:37:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 17:37:17] 
[2026-03-09 17:37:17] 2026-03-09 16:36:24,799 | INFO     | **************************************
[2026-03-09 17:37:17] 2026-03-09 16:36:25,071 | WARNING  | process 3538966 can no longer be monitored (due to stat problems) - aborting
[2026-03-09 17:37:17] 2026-03-09 16:36:25,300 | INFO     | executing command: df -mP /var/lib/boinc/var/slot24/slots/6
[2026-03-09 17:37:17] 2026-03-09 16:36:25,324 | INFO     | sufficient remaining disk space (24578621440 B)
[2026-03-09 17:37:17] 2026-03-09 16:36:25,324 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 17:37:17] 2026-03-09 16:36:25,324 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 17:37:17] 2026-03-09 16:36:25,324 | INFO     | update_server=False
[2026-03-09 17:37:17] 2026-03-09 16:36:25,324 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 17:37:17] 2026-03-09 16:36:25,325 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 17:37:17] 2026-03-09 16:36:25,362 | INFO     | using path: /var/lib/boinc/var/slot24/slots/6/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 17:37:17] 2026-03-09 16:36:25,774 | INFO     | all job control threads have been joined
[2026-03-09 17:37:17] 2026-03-09 16:36:25,790 | INFO     | number of running child processes to parent process 3538966: 1
[2026-03-09 17:37:17] 2026-03-09 16:36:25,790 | INFO     | maximum number of monitored processes: 6
[2026-03-09 17:37:17] 2026-03-09 16:36:25,790 | INFO     | aborting job monitoring since job object (job id=7047190665) has expired
[2026-03-09 17:37:17] 2026-03-09 16:36:25,790 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 17:37:17] 2026-03-09 16:36:25,790 | INFO     | will abort loop
[2026-03-09 17:37:17] 2026-03-09 16:36:26,062 | INFO     | all data control threads have been joined
[2026-03-09 17:37:17] 2026-03-09 16:36:26,167 | INFO     | all payload control threads have been joined
[2026-03-09 17:37:17] 2026-03-09 16:36:26,329 | INFO     | [job] retrieve thread has finished
[2026-03-09 17:37:17] 2026-03-09 16:36:26,350 | INFO     | [payload] failed_post thread has finished
[2026-03-09 17:37:17] 2026-03-09 16:36:26,779 | INFO     | [job] control thread has finished
[2026-03-09 17:37:17] 2026-03-09 16:36:26,795 | INFO     | [job] job monitor thread has finished
[2026-03-09 17:37:17] 2026-03-09 16:36:26,843 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 17:37:17] 2026-03-09 16:36:27,068 | INFO     | [data] control thread has finished
[2026-03-09 17:37:17] 2026-03-09 16:36:27,172 | INFO     | [payload] control thread has finished
[2026-03-09 17:37:17] 2026-03-09 16:36:27,285 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 17:37:17] 2026-03-09 16:36:27,325 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 17:37:17] 2026-03-09 16:36:27,330 | INFO     | [data] copytool_out thread has finished
[2026-03-09 17:37:17] 2026-03-09 16:36:27,347 | INFO     | [payload] validate_post thread has finished
[2026-03-09 17:37:17] 2026-03-09 16:36:27,383 | INFO     | [job] validate thread has finished
[2026-03-09 17:37:17] 2026-03-09 16:36:27,415 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 17:37:17] 2026-03-09 16:36:27,738 | INFO     | [data] copytool_in thread has finished
[2026-03-09 17:37:17] 2026-03-09 16:36:27,982 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 17:37:17] 2026-03-09 16:36:28,987 | INFO     | [job] queue monitor thread has finished
[2026-03-09 17:37:17] 2026-03-09 16:36:31,330 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 17:37:17] 2026-03-09 16:36:35,535 | INFO     | job.realtimelogging is not enabled
[2026-03-09 17:37:17] 2026-03-09 16:36:36,540 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 17:37:17] 2026-03-09 16:36:55,209 | INFO     | PID=3526238 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 17:37:17] 2026-03-09 16:36:55,209 | INFO     | .. there are 61 such processes running
[2026-03-09 17:37:17] 2026-03-09 16:36:55,209 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 17:37:17] 2026-03-09 16:36:55,209 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 17:37:17] 2026-03-09 16:36:55,209 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 17:37:17] 2026-03-09 16:37:11,334 | INFO     | [monitor] cgroup control has ended
[2026-03-09 17:37:17] 2026-03-09 16:37:11,865 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22453152536384)>', '<ExcThread(monitor, started 22452913846016)>']
[2026-03-09 17:37:17] 2026-03-09 16:37:12,293 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 17:37:17] 2026-03-09 16:37:12,294 | INFO     | [monitor] control thread has ended
[2026-03-09 17:37:17] 2026-03-09 16:37:16,890 | INFO     | all workflow threads have been joined
[2026-03-09 17:37:17] 2026-03-09 16:37:16,891 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 17:37:17] 2026-03-09 16:37:16,891 | INFO     | traces error code: 0
[2026-03-09 17:37:17] 2026-03-09 16:37:16,891 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 17:37:17] 2026-03-09 16:37:17,012 [wrapper] ==== pilot stdout END ====
[2026-03-09 17:37:17] 2026-03-09 16:37:17,014 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 17:37:17] 2026-03-09 16:37:17,016 [wrapper] pilotpid: 3526238
[2026-03-09 17:37:17] 2026-03-09 16:37:17,017 [wrapper] Pilot exit status: 0
[2026-03-09 17:37:17] 2026-03-09 16:37:17,025 [wrapper] pandaids: 7047190665
[2026-03-09 17:37:17] 2026-03-09 16:37:17,136 [wrapper] cleanup supervisor_pilot  489535 3526239
[2026-03-09 17:37:17] 2026-03-09 16:37:17,138 [wrapper] Test setup, not cleaning
[2026-03-09 17:37:17] 2026-03-09 16:37:17,139 [wrapper] apfmon messages muted
[2026-03-09 17:37:17] 2026-03-09 16:37:17,140 [wrapper] ==== wrapper stdout END ====
[2026-03-09 17:37:17] 2026-03-09 16:37:17,142 [wrapper] ==== wrapper stderr END ====
[2026-03-09 17:37:17]  *** Error codes and diagnostics ***
[2026-03-09 17:37:17]     "exeErrorCode": 0,
[2026-03-09 17:37:17]     "exeErrorDiag": "",
[2026-03-09 17:37:17]     "pilotErrorCode": 0,
[2026-03-09 17:37:17]     "pilotErrorDiag": "",
[2026-03-09 17:37:17]  *** Listing of results directory ***
[2026-03-09 17:37:17] total 554200
[2026-03-09 17:37:17] -rw-r--r--. 1 boinc boinc    584627 Mar  9 11:57 pilot3.tar.gz
[2026-03-09 17:37:17] -rwx------. 1 boinc boinc     36322 Mar  9 11:59 runpilot2-wrapper.sh
[2026-03-09 17:37:17] -rw-r--r--. 1 boinc boinc      5111 Mar  9 12:01 queuedata.json
[2026-03-09 17:37:17] -rw-r--r--. 1 boinc boinc       100 Mar  9 15:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 17:37:17] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 15:49 run_atlas
[2026-03-09 17:37:17] -rw-r--r--. 1 boinc boinc       105 Mar  9 15:49 job.xml
[2026-03-09 17:37:17] -rw-r--r--. 2 boinc boinc     15845 Mar  9 15:49 start_atlas.sh
[2026-03-09 17:37:17] drwxrwx--x. 2 boinc boinc      4096 Mar  9 15:49 shared
[2026-03-09 17:37:17] -rw-r--r--. 2 boinc boinc    597965 Mar  9 15:49 input.tar.gz
[2026-03-09 17:37:17] -rw-r--r--. 1 boinc boinc      6701 Mar  9 15:49 init_data.xml
[2026-03-09 17:37:17] -rw-r--r--. 2 boinc boinc 322759836 Mar  9 15:49 EVNT.48998020._000035.pool.root.1
[2026-03-09 17:37:17] -rw-r--r--. 1 boinc boinc         0 Mar  9 15:49 boinc_lockfile
[2026-03-09 17:37:17] -rw-r--r--. 1 boinc boinc      2609 Mar  9 15:49 pandaJob.out
[2026-03-09 17:37:17] -rw-------. 1 boinc boinc    990760 Mar  9 15:49 agis_schedconf.cvmfs.json
[2026-03-09 17:37:17] -rw-------. 1 boinc boinc   1511578 Mar  9 15:49 agis_ddmendpoints.agis.ALL.json
[2026-03-09 17:37:17] -rw-------. 1 boinc boinc       444 Mar  9 15:50 workernode_map.json
[2026-03-09 17:37:17] drwx------. 5 boinc boinc      4096 Mar  9 15:50 pilot3
[2026-03-09 17:37:17] -rw-------. 1 boinc boinc 238373993 Mar  9 17:35 HITS.48998022._000875.pool.root.1
[2026-03-09 17:37:17] -rw-r--r--. 1 boinc boinc       529 Mar  9 17:36 boinc_task_state.xml
[2026-03-09 17:37:17] -rw-------. 1 boinc boinc        95 Mar  9 17:36 pilot_heartbeat.json
[2026-03-09 17:37:17] -rw-------. 1 boinc boinc      1031 Mar  9 17:36 memory_monitor_summary.json
[2026-03-09 17:37:17] -rw-------. 1 boinc boinc    303241 Mar  9 17:36 log.48998022._000875.job.log.tgz.1
[2026-03-09 17:37:17] -rw-------. 1 boinc boinc      6349 Mar  9 17:36 heartbeat.json
[2026-03-09 17:37:17] -rw-r--r--. 1 boinc boinc        27 Mar  9 17:37 wrapper_checkpoint.txt
[2026-03-09 17:37:17] -rw-r--r--. 1 boinc boinc      8192 Mar  9 17:37 boinc_mmap_file
[2026-03-09 17:37:17] -rw-------. 1 boinc boinc      5433 Mar  9 17:37 pilotlog.txt
[2026-03-09 17:37:17] -rw-------. 1 boinc boinc    919056 Mar  9 17:37 log.48998022._000875.job.log.1
[2026-03-09 17:37:17] -rw-------. 1 boinc boinc       357 Mar  9 17:37 output.list
[2026-03-09 17:37:17] -rw-r--r--. 1 boinc boinc       620 Mar  9 17:37 runtime_log
[2026-03-09 17:37:17] -rw-------. 1 boinc boinc   1239040 Mar  9 17:37 result.tar.gz
[2026-03-09 17:37:17] -rw-r--r--. 1 boinc boinc      9204 Mar  9 17:37 runtime_log.err
[2026-03-09 17:37:17] -rw-------. 1 boinc boinc       663 Mar  9 17:37 LqjKDmVVnJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmTaZLDmfNJB6m.diag
[2026-03-09 17:37:17] -rw-r--r--. 1 boinc boinc     20815 Mar  9 17:37 stderr.txt
[2026-03-09 17:37:17] HITS file was successfully produced:
[2026-03-09 17:37:17] -rw-------. 1 boinc boinc 238373993 Mar  9 17:35 shared/HITS.pool.root.1
[2026-03-09 17:37:17]  *** Contents of shared directory: ***
[2026-03-09 17:37:17] total 549804
[2026-03-09 17:37:17] -rw-r--r--. 2 boinc boinc     15845 Mar  9 15:49 start_atlas.sh
[2026-03-09 17:37:17] -rw-r--r--. 2 boinc boinc    597965 Mar  9 15:49 input.tar.gz
[2026-03-09 17:37:17] -rw-r--r--. 2 boinc boinc 322759836 Mar  9 15:49 ATLAS.root_0
[2026-03-09 17:37:17] -rw-------. 1 boinc boinc 238373993 Mar  9 17:35 HITS.pool.root.1
[2026-03-09 17:37:17] -rw-------. 1 boinc boinc   1239040 Mar  9 17:37 result.tar.gz
17:37:18 (3519215): run_atlas exited; CPU time 24732.711231
17:37:18 (3519215): called boinc_finish(0)

</stderr_txt>
]]>

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