Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:14:46 (2536661): wrapper (7.7.26015): starting
21:14:46 (2536661): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 21:14:46] Arguments: --nthreads 4
[2026-03-09 21:14:46] Threads: 4
[2026-03-09 21:14:46] Checking for CVMFS
[2026-03-09 21:14:46] No cvmfs_config command found, will try listing directly
[2026-03-09 21:14:46] CVMFS is ok
[2026-03-09 21:14:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 21:14:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 21:14:46] Further information can be found at the LHC@home message board.
[2026-03-09 21:14:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 21:14:46] Checking for apptainer binary...
[2026-03-09 21:14:46] which: no apptainer in ((null))
[2026-03-09 21:14:46] apptainer is not installed, using version from CVMFS
[2026-03-09 21:14:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 21:14:46] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot32/slots/6/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut20.grid.cesnet.cz
[2026-03-09 21:14:46] apptainer works
[2026-03-09 21:14:46] Set ATHENA_PROC_NUMBER=4
[2026-03-09 21:14:46] Set ATHENA_CORE_NUMBER=4
[2026-03-09 21:14:46] Starting ATLAS job with PandaID=7047151565
[2026-03-09 21:14:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot32/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 23:28:21]  *** The last 200 lines of the pilot log: ***
[2026-03-09 23:28:21] 2026-03-09 22:27:42,682 | INFO     | sum of deviations: 12936588114.999998
[2026-03-09 23:28:21] 2026-03-09 22:27:42,682 | INFO     | mean x: 1773091115.0
[2026-03-09 23:28:21] 2026-03-09 22:27:42,682 | INFO     | mean y: 2338575.624
[2026-03-09 23:28:21] 2026-03-09 22:27:42,682 | INFO     | intersect: -37874187266.40613
[2026-03-09 23:28:21] 2026-03-09 22:27:42,682 | INFO     | chi2: 1.0665718389681265
[2026-03-09 23:28:21] 2026-03-09 22:27:42,682 | INFO     | current chi2=1.0665718389681265 (change=-0.09715704755100402 %)
[2026-03-09 23:28:21] 2026-03-09 22:27:42,682 | INFO     | right removable region: 124
[2026-03-09 23:28:21] 2026-03-09 22:27:42,682 | INFO     | sum of square deviations: 605592750.0
[2026-03-09 23:28:21] 2026-03-09 22:27:42,683 | INFO     | sum of deviations: 1083640599.9999998
[2026-03-09 23:28:21] 2026-03-09 22:27:42,683 | INFO     | mean x: 1773091420.0
[2026-03-09 23:28:21] 2026-03-09 22:27:42,683 | INFO     | mean y: 2364111.992
[2026-03-09 23:28:21] 2026-03-09 22:27:42,683 | INFO     | intersect: -3170384984.2011952
[2026-03-09 23:28:21] 2026-03-09 22:27:42,683 | INFO     | chi2: 0.0002466054051766424
[2026-03-09 23:28:21] 2026-03-09 22:27:42,683 | INFO     | current chi2=0.0002466054051766424 (change=99.97685622377334 %)
[2026-03-09 23:28:21] 2026-03-09 22:27:42,683 | INFO     | sum of square deviations: 535786790.0
[2026-03-09 23:28:21] 2026-03-09 22:27:42,683 | INFO     | sum of deviations: 779013493.0
[2026-03-09 23:28:21] 2026-03-09 22:27:42,683 | INFO     | mean x: 1773091572.5
[2026-03-09 23:28:21] 2026-03-09 22:27:42,683 | INFO     | mean y: 2364778.433333333
[2026-03-09 23:28:21] 2026-03-09 22:27:42,683 | INFO     | intersect: -2575642527.98437
[2026-03-09 23:28:21] 2026-03-09 22:27:42,683 | INFO     | chi2: 0.00014087949011510738
[2026-03-09 23:28:21] 2026-03-09 22:27:42,686 | INFO     | current chi2=0.00014087949011510738 (change=42.872505160948926 %)
[2026-03-09 23:28:21] 2026-03-09 22:27:42,686 | INFO     | sum of square deviations: 471562330.0
[2026-03-09 23:28:21] 2026-03-09 22:27:42,686 | INFO     | sum of deviations: 605330938.0
[2026-03-09 23:28:21] 2026-03-09 22:27:42,686 | INFO     | mean x: 1773091725.0
[2026-03-09 23:28:21] 2026-03-09 22:27:42,686 | INFO     | mean y: 2365188.191304348
[2026-03-09 23:28:21] 2026-03-09 22:27:42,686 | INFO     | intersect: -2273701428.6105256
[2026-03-09 23:28:21] 2026-03-09 22:27:42,687 | INFO     | chi2: 9.727165997272982e-05
[2026-03-09 23:28:21] 2026-03-09 22:27:42,687 | INFO     | current chi2=9.727165997272982e-05 (change=30.953994869478326 %)
[2026-03-09 23:28:21] 2026-03-09 22:27:42,687 | INFO     | sum of square deviations: 412686807.5
[2026-03-09 23:28:21] 2026-03-09 22:27:42,687 | INFO     | sum of deviations: 572439250.0000001
[2026-03-09 23:28:21] 2026-03-09 22:27:42,687 | INFO     | mean x: 1773091877.5
[2026-03-09 23:28:21] 2026-03-09 22:27:42,687 | INFO     | mean y: 2365275.090909091
[2026-03-09 23:28:21] 2026-03-09 22:27:42,687 | INFO     | intersect: -2457096394.3669696
[2026-03-09 23:28:21] 2026-03-09 22:27:42,687 | INFO     | chi2: 8.850948644785283e-05
[2026-03-09 23:28:21] 2026-03-09 22:27:42,687 | INFO     | current chi2=8.850948644785283e-05 (change=9.007940778777169 %)
[2026-03-09 23:28:21] 2026-03-09 22:27:42,687 | INFO     | left removable region: 40
[2026-03-09 23:28:21] 2026-03-09 22:27:42,687 | INFO     | sum of square deviations: 183761585.0
[2026-03-09 23:28:21] 2026-03-09 22:27:42,688 | INFO     | sum of deviations: 241655892.00000003
[2026-03-09 23:28:21] 2026-03-09 22:27:42,688 | INFO     | mean x: 1773092304.5
[2026-03-09 23:28:21] 2026-03-09 22:27:42,688 | INFO     | mean y: 2366230.6904761903
[2026-03-09 23:28:21] 2026-03-09 22:27:42,688 | INFO     | intersect: -2329340923.6763253
[2026-03-09 23:28:21] 2026-03-09 22:27:42,688 | INFO     | chi2: 5.0622478849730596e-05
[2026-03-09 23:28:21] 2026-03-09 22:27:42,688 | INFO     | current memory leak: 1.32 B/s (using 84 data points, chi2=0.00)
[2026-03-09 23:28:21] 2026-03-09 22:27:42,688 | INFO     | could have reported an average CPU frequency of 3558 MHz (8 samples)
[2026-03-09 23:28:21] 2026-03-09 22:27:42,688 | INFO     | ..............................
[2026-03-09 23:28:21] 2026-03-09 22:27:42,688 | INFO     | . Timing measurements:
[2026-03-09 23:28:21] 2026-03-09 22:27:42,688 | INFO     | . get job = 0 s
[2026-03-09 23:28:21] 2026-03-09 22:27:42,688 | INFO     | . initial setup = 5 s
[2026-03-09 23:28:21] 2026-03-09 22:27:42,688 | INFO     | . payload setup = 8 s
[2026-03-09 23:28:21] 2026-03-09 22:27:42,688 | INFO     | . stage-in = 0 s
[2026-03-09 23:28:21] 2026-03-09 22:27:42,688 | INFO     | . payload execution = 7933 s
[2026-03-09 23:28:21] 2026-03-09 22:27:42,688 | INFO     | . stage-out = 0 s
[2026-03-09 23:28:21] 2026-03-09 22:27:42,688 | INFO     | . log creation = 0 s
[2026-03-09 23:28:21] 2026-03-09 22:27:42,688 | INFO     | ..............................
[2026-03-09 23:28:21] 2026-03-09 22:27:42,741 | INFO     | 
[2026-03-09 23:28:21] 2026-03-09 22:27:42,741 | INFO     | job summary report
[2026-03-09 23:28:21] 2026-03-09 22:27:42,741 | INFO     | --------------------------------------------------
[2026-03-09 23:28:21] 2026-03-09 22:27:42,741 | INFO     | PanDA job id: 7047151565
[2026-03-09 23:28:21] 2026-03-09 22:27:42,741 | INFO     | task id: 48998032
[2026-03-09 23:28:21] 2026-03-09 22:27:42,741 | INFO     | errors: (none)
[2026-03-09 23:28:21] 2026-03-09 22:27:42,741 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 23:28:21] 2026-03-09 22:27:42,741 | INFO     | pilot state: finished 
[2026-03-09 23:28:21] 2026-03-09 22:27:42,741 | INFO     | transexitcode: 0
[2026-03-09 23:28:21] 2026-03-09 22:27:42,741 | INFO     | exeerrorcode: 0
[2026-03-09 23:28:21] 2026-03-09 22:27:42,741 | INFO     | exeerrordiag: 
[2026-03-09 23:28:21] 2026-03-09 22:27:42,741 | INFO     | exitcode: 0
[2026-03-09 23:28:21] 2026-03-09 22:27:42,741 | INFO     | exitmsg: OK
[2026-03-09 23:28:21] 2026-03-09 22:27:42,741 | INFO     | cpuconsumptiontime: 30099 s
[2026-03-09 23:28:21] 2026-03-09 22:27:42,741 | INFO     | nevents: 400
[2026-03-09 23:28:21] 2026-03-09 22:27:42,742 | INFO     | neventsw: 0
[2026-03-09 23:28:21] 2026-03-09 22:27:42,742 | INFO     | pid: 2547242
[2026-03-09 23:28:21] 2026-03-09 22:27:42,742 | INFO     | pgrp: 2547242
[2026-03-09 23:28:21] 2026-03-09 22:27:42,742 | INFO     | corecount: 4
[2026-03-09 23:28:21] 2026-03-09 22:27:42,742 | INFO     | event service: False
[2026-03-09 23:28:21] 2026-03-09 22:27:42,742 | INFO     | sizes: {0: 2280236, 11: 2280236, 7946: 2308020, 7947: 2317040, 7948: 2317096, 7950: 2317290}
[2026-03-09 23:28:21] 2026-03-09 22:27:42,742 | INFO     | --------------------------------------------------
[2026-03-09 23:28:21] 2026-03-09 22:27:42,742 | INFO     | 
[2026-03-09 23:28:21] 2026-03-09 22:27:42,742 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot32/slots/6
[2026-03-09 23:28:21] 2026-03-09 22:27:42,773 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 23:28:21] 2026-03-09 22:27:42,774 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 23:28:21] 2026-03-09 22:27:42,774 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 23:28:21] 2026-03-09 22:27:42,774 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 23:28:21] 2026-03-09 22:27:42,774 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 23:28:21] 2026-03-09 22:27:42,774 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 23:28:21] 2026-03-09 22:27:42,774 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 23:28:21] 2026-03-09 22:27:42,774 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 23:28:21] 2026-03-09 22:27:42,774 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 23:28:21] 2026-03-09 22:27:42,774 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 23:28:21] 2026-03-09 22:27:42,774 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 23:28:21] 2026-03-09 22:27:42,774 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 23:28:21] 2026-03-09 22:27:42,774 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 23:28:21] 2026-03-09 22:27:42,774 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 23:28:21] 2026-03-09 22:27:42,774 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 23:28:21] 2026-03-09 22:27:42,774 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 23:28:21] 2026-03-09 22:27:42,774 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 23:28:21] 2026-03-09 22:27:42,774 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 23:28:21] 2026-03-09 22:27:42,774 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 23:28:21] 2026-03-09 22:27:42,774 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 23:28:21] 2026-03-09 22:27:42,774 | INFO     | job 7047151565 has completed (purged errors)
[2026-03-09 23:28:21] 2026-03-09 22:27:42,774 | INFO     | overall cleanup function is called
[2026-03-09 23:28:21] 2026-03-09 22:27:43,143 | WARNING  | process 2547242 can no longer be monitored (due to stat problems) - aborting
[2026-03-09 23:28:21] 2026-03-09 22:27:43,426 | INFO     | using path: /var/lib/boinc/var/slot32/slots/6/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 23:28:21] 2026-03-09 22:27:43,427 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot32/slots/6/PanDA_Pilot-7047151565/payload.stdout) since it has not been created yet
[2026-03-09 23:28:21] 2026-03-09 22:27:43,427 | INFO     | executing command: df -mP /var/lib/boinc/var/slot32/slots/6
[2026-03-09 23:28:21] 2026-03-09 22:27:43,435 | INFO     | sufficient remaining disk space (20670578688 B)
[2026-03-09 23:28:21] 2026-03-09 22:27:43,435 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-09 23:28:21] 2026-03-09 22:27:43,435 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot32/slots/6/PanDA_Pilot-7047151565/HITS.48998032._000203.pool.root.1 since it does not exist
[2026-03-09 23:28:21] 2026-03-09 22:27:43,782 | INFO     | --- collectZombieJob: --- 10, [2547242]
[2026-03-09 23:28:21] 2026-03-09 22:27:43,782 | INFO     | zombie collector waiting for pid 2547242
[2026-03-09 23:28:21] 2026-03-09 22:27:43,782 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 23:28:21] 2026-03-09 22:27:43,782 | INFO     | collected zombie processes
[2026-03-09 23:28:21] 2026-03-09 22:27:43,782 | INFO     | will attempt to kill all subprocesses of pid=2547242
[2026-03-09 23:28:21] 2026-03-09 22:27:44,055 | INFO     | number of running child processes to parent process 2547242: 1
[2026-03-09 23:28:21] 2026-03-09 22:27:44,055 | INFO     | maximum number of monitored processes: 6
[2026-03-09 23:28:21] 2026-03-09 22:27:44,055 | INFO     | aborting job monitoring since job object (job id=7047151565) has expired
[2026-03-09 23:28:21] 2026-03-09 22:27:44,386 | INFO     | process IDs to be killed: [2547242] (in reverse order)
[2026-03-09 23:28:21] 2026-03-09 22:27:44,603 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 23:28:21] 2026-03-09 22:27:44,603 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 23:28:21] 2026-03-09 22:27:44,629 | INFO     | did not find any defunct processes belonging to 2547242
[2026-03-09 23:28:21] 2026-03-09 22:27:44,655 | INFO     | did not find any defunct processes belonging to 2547242
[2026-03-09 23:28:21] 2026-03-09 22:27:44,655 | INFO     | ready for new job
[2026-03-09 23:28:21] 2026-03-09 22:27:44,655 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 23:28:21] 2026-03-09 22:27:44,657 | INFO     | **************************************
[2026-03-09 23:28:21] 2026-03-09 22:27:44,657 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 23:28:21] 2026-03-09 22:27:44,657 | INFO     | **************************************
[2026-03-09 23:28:21] 2026-03-09 22:27:44,657 | INFO     | 
[2026-03-09 23:28:21] 2026-03-09 22:27:44,663 | INFO     | architecture information:
[2026-03-09 23:28:21] 2026-03-09 22:27:44,663 | INFO     | executing command: cat /etc/os-release
[2026-03-09 23:28:21] 2026-03-09 22:27:44,680 | INFO     | cat /etc/os-release:
[2026-03-09 23:28:21] NAME="CentOS Linux"
[2026-03-09 23:28:21] VERSION="7 (Core)"
[2026-03-09 23:28:21] ID="centos"
[2026-03-09 23:28:21] ID_LIKE="rhel fedora"
[2026-03-09 23:28:21] VERSION_ID="7"
[2026-03-09 23:28:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 23:28:21] ANSI_COLOR="0;31"
[2026-03-09 23:28:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 23:28:21] HOME_URL="https://www.centos.org/"
[2026-03-09 23:28:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 23:28:21] 
[2026-03-09 23:28:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 23:28:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 23:28:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 23:28:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 23:28:21] 
[2026-03-09 23:28:21] 2026-03-09 22:27:44,680 | INFO     | **************************************
[2026-03-09 23:28:21] 2026-03-09 22:27:45,183 | INFO     | executing command: df -mP /var/lib/boinc/var/slot32/slots/6
[2026-03-09 23:28:21] 2026-03-09 22:27:45,197 | INFO     | sufficient remaining disk space (20664287232 B)
[2026-03-09 23:28:21] 2026-03-09 22:27:45,197 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 23:28:21] 2026-03-09 22:27:45,197 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 23:28:21] 2026-03-09 22:27:45,197 | INFO     | update_server=False
[2026-03-09 23:28:21] 2026-03-09 22:27:45,197 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 23:28:21] 2026-03-09 22:27:45,198 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 23:28:21] 2026-03-09 22:27:45,198 | INFO     | aborting loop
[2026-03-09 23:28:21] 2026-03-09 22:27:45,198 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 23:28:21] 2026-03-09 22:27:45,562 | INFO     | all data control threads have been joined
[2026-03-09 23:28:21] 2026-03-09 22:27:45,600 | INFO     | all payload control threads have been joined
[2026-03-09 23:28:21] 2026-03-09 22:27:46,047 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 23:28:21] 2026-03-09 22:27:46,202 | INFO     | [job] retrieve thread has finished
[2026-03-09 23:28:21] 2026-03-09 22:27:46,203 | INFO     | [job] job monitor thread has finished
[2026-03-09 23:28:21] 2026-03-09 22:27:46,398 | INFO     | [payload] failed_post thread has finished
[2026-03-09 23:28:21] 2026-03-09 22:27:46,567 | INFO     | [data] control thread has finished
[2026-03-09 23:28:21] 2026-03-09 22:27:46,572 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 23:28:21] 2026-03-09 22:27:46,605 | INFO     | [payload] control thread has finished
[2026-03-09 23:28:21] 2026-03-09 22:27:46,645 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 23:28:21] 2026-03-09 22:27:46,761 | INFO     | [job] validate thread has finished
[2026-03-09 23:28:21] 2026-03-09 22:27:46,851 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 23:28:21] 2026-03-09 22:27:46,893 | INFO     | all job control threads have been joined
[2026-03-09 23:28:21] 2026-03-09 22:27:47,082 | INFO     | [data] copytool_in thread has finished
[2026-03-09 23:28:21] 2026-03-09 22:27:47,203 | INFO     | [data] copytool_out thread has finished
[2026-03-09 23:28:21] 2026-03-09 22:27:47,293 | INFO     | [payload] validate_post thread has finished
[2026-03-09 23:28:21] 2026-03-09 22:27:47,750 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 23:28:21] 2026-03-09 22:27:47,898 | INFO     | [job] control thread has finished
[2026-03-09 23:28:21] 2026-03-09 22:27:48,755 | INFO     | [job] queue monitor thread has finished
[2026-03-09 23:28:21] 2026-03-09 22:27:50,052 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 23:28:21] 2026-03-09 22:27:55,680 | INFO     | job.realtimelogging is not enabled
[2026-03-09 23:28:21] 2026-03-09 22:27:56,685 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 23:28:21] 2026-03-09 22:28:13,821 | INFO     | [monitor] cgroup control has ended
[2026-03-09 23:28:21] 2026-03-09 22:28:15,425 | INFO     | PID=2541188 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 23:28:21] 2026-03-09 22:28:15,425 | INFO     | .. there are 60 such processes running
[2026-03-09 23:28:21] 2026-03-09 22:28:15,425 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 23:28:21] 2026-03-09 22:28:15,425 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 23:28:21] 2026-03-09 22:28:15,426 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 23:28:21] 2026-03-09 22:28:15,792 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22783612266304)>', '<ExcThread(monitor, started 22783372568320)>']
[2026-03-09 23:28:21] 2026-03-09 22:28:16,430 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 23:28:21] 2026-03-09 22:28:16,430 | INFO     | [monitor] control thread has ended
[2026-03-09 23:28:21] 2026-03-09 22:28:20,817 | INFO     | all workflow threads have been joined
[2026-03-09 23:28:21] 2026-03-09 22:28:20,820 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 23:28:21] 2026-03-09 22:28:20,820 | INFO     | traces error code: 0
[2026-03-09 23:28:21] 2026-03-09 22:28:20,820 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 23:28:21] 2026-03-09 22:28:20,957 [wrapper] ==== pilot stdout END ====
[2026-03-09 23:28:21] 2026-03-09 22:28:20,959 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 23:28:21] 2026-03-09 22:28:20,961 [wrapper] pilotpid: 2541188
[2026-03-09 23:28:21] 2026-03-09 22:28:20,962 [wrapper] Pilot exit status: 0
[2026-03-09 23:28:21] 2026-03-09 22:28:20,970 [wrapper] pandaids: 7047151565
[2026-03-09 23:28:21] 2026-03-09 22:28:21,074 [wrapper] cleanup supervisor_pilot 3880636 2541189
[2026-03-09 23:28:21] 2026-03-09 22:28:21,078 [wrapper] Test setup, not cleaning
[2026-03-09 23:28:21] 2026-03-09 22:28:21,081 [wrapper] apfmon messages muted
[2026-03-09 23:28:21] 2026-03-09 22:28:21,084 [wrapper] ==== wrapper stdout END ====
[2026-03-09 23:28:21] 2026-03-09 22:28:21,086 [wrapper] ==== wrapper stderr END ====
[2026-03-09 23:28:21]  *** Error codes and diagnostics ***
[2026-03-09 23:28:21]     "exeErrorCode": 0,
[2026-03-09 23:28:21]     "exeErrorDiag": "",
[2026-03-09 23:28:21]     "pilotErrorCode": 0,
[2026-03-09 23:28:21]     "pilotErrorDiag": "",
[2026-03-09 23:28:21]  *** Listing of results directory ***
[2026-03-09 23:28:21] total 642272
[2026-03-09 23:28:21] -rw-r--r--. 1 boinc boinc      5111 Mar  9 11:57 queuedata.json
[2026-03-09 23:28:21] -rw-r--r--. 1 boinc boinc    584627 Mar  9 11:57 pilot3.tar.gz
[2026-03-09 23:28:21] -rwx------. 1 boinc boinc     36322 Mar  9 11:57 runpilot2-wrapper.sh
[2026-03-09 23:28:21] -rw-r--r--. 1 boinc boinc       100 Mar  9 21:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 23:28:21] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 21:14 run_atlas
[2026-03-09 23:28:21] -rw-r--r--. 1 boinc boinc       105 Mar  9 21:14 job.xml
[2026-03-09 23:28:21] -rw-r--r--. 1 boinc boinc      6705 Mar  9 21:14 init_data.xml
[2026-03-09 23:28:21] -rw-r--r--. 2 boinc boinc 359427612 Mar  9 21:14 EVNT.48998030._000009.pool.root.1
[2026-03-09 23:28:21] -rw-r--r--. 2 boinc boinc     15845 Mar  9 21:14 start_atlas.sh
[2026-03-09 23:28:21] drwxrwx--x. 2 boinc boinc      4096 Mar  9 21:14 shared
[2026-03-09 23:28:21] -rw-r--r--. 2 boinc boinc    597937 Mar  9 21:14 input.tar.gz
[2026-03-09 23:28:21] -rw-r--r--. 1 boinc boinc         0 Mar  9 21:14 boinc_lockfile
[2026-03-09 23:28:21] -rw-r--r--. 1 boinc boinc      2557 Mar  9 21:14 pandaJob.out
[2026-03-09 23:28:21] -rw-------. 1 boinc boinc   1002746 Mar  9 21:14 agis_schedconf.cvmfs.json
[2026-03-09 23:28:21] -rw-------. 1 boinc boinc   1511578 Mar  9 21:14 agis_ddmendpoints.agis.ALL.json
[2026-03-09 23:28:21] -rw-------. 1 boinc boinc       444 Mar  9 21:15 workernode_map.json
[2026-03-09 23:28:21] drwx------. 5 boinc boinc      4096 Mar  9 21:15 pilot3
[2026-03-09 23:28:21] -rw-------. 1 boinc boinc 291449366 Mar  9 23:27 HITS.48998032._000203.pool.root.1
[2026-03-09 23:28:21] -rw-------. 1 boinc boinc        95 Mar  9 23:27 pilot_heartbeat.json
[2026-03-09 23:28:21] -rw-r--r--. 1 boinc boinc       530 Mar  9 23:27 boinc_task_state.xml
[2026-03-09 23:28:21] -rw-------. 1 boinc boinc      1033 Mar  9 23:27 memory_monitor_summary.json
[2026-03-09 23:28:21] -rw-------. 1 boinc boinc    304658 Mar  9 23:27 log.48998032._000203.job.log.tgz.1
[2026-03-09 23:28:21] -rw-------. 1 boinc boinc      6344 Mar  9 23:27 heartbeat.json
[2026-03-09 23:28:21] -rw-r--r--. 1 boinc boinc      8192 Mar  9 23:28 boinc_mmap_file
[2026-03-09 23:28:21] -rw-r--r--. 1 boinc boinc        27 Mar  9 23:28 wrapper_checkpoint.txt
[2026-03-09 23:28:21] -rw-------. 1 boinc boinc      4901 Mar  9 23:28 pilotlog.txt
[2026-03-09 23:28:21] -rw-------. 1 boinc boinc   1135673 Mar  9 23:28 log.48998032._000203.job.log.1
[2026-03-09 23:28:21] -rw-------. 1 boinc boinc       357 Mar  9 23:28 output.list
[2026-03-09 23:28:21] -rw-r--r--. 1 boinc boinc       620 Mar  9 23:28 runtime_log
[2026-03-09 23:28:21] -rw-------. 1 boinc boinc   1454080 Mar  9 23:28 result.tar.gz
[2026-03-09 23:28:21] -rw-r--r--. 1 boinc boinc      9204 Mar  9 23:28 runtime_log.err
[2026-03-09 23:28:21] -rw-------. 1 boinc boinc       663 Mar  9 23:28 0heKDm1TnJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmQDcLDmCxIctm.diag
[2026-03-09 23:28:21] -rw-r--r--. 1 boinc boinc     21168 Mar  9 23:28 stderr.txt
[2026-03-09 23:28:21] HITS file was successfully produced:
[2026-03-09 23:28:21] -rw-------. 1 boinc boinc 291449366 Mar  9 23:27 shared/HITS.pool.root.1
[2026-03-09 23:28:21]  *** Contents of shared directory: ***
[2026-03-09 23:28:21] total 637652
[2026-03-09 23:28:21] -rw-r--r--. 2 boinc boinc 359427612 Mar  9 21:14 ATLAS.root_0
[2026-03-09 23:28:21] -rw-r--r--. 2 boinc boinc     15845 Mar  9 21:14 start_atlas.sh
[2026-03-09 23:28:21] -rw-r--r--. 2 boinc boinc    597937 Mar  9 21:14 input.tar.gz
[2026-03-09 23:28:21] -rw-------. 1 boinc boinc 291449366 Mar  9 23:27 HITS.pool.root.1
[2026-03-09 23:28:21] -rw-------. 1 boinc boinc   1454080 Mar  9 23:28 result.tar.gz
23:28:22 (2536661): run_atlas exited; CPU time 30448.037718
23:28:22 (2536661): called boinc_finish(0)

</stderr_txt>
]]>

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