Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:16:23 (24747): wrapper (7.7.26015): starting
06:16:23 (24747): wrapper: running run_atlas (--nthreads 12)
[2026-03-09 06:16:23] Arguments: --nthreads 12
[2026-03-09 06:16:23] Threads: 12
[2026-03-09 06:16:23] Checking for CVMFS
[2026-03-09 06:16:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 06:16:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 06:16:24] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 06:16:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 06:16:24] 2.11.2.0 3035 435824 103384 157071 3 50 15618829 20275200 1 130560 3 187185896 99.952 25535067 17433 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-09 06:16:24] CVMFS is ok
[2026-03-09 06:16:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 06:16:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 06:16:24] Further information can be found at the LHC@home message board.
[2026-03-09 06:16:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 06:16:24] Checking for apptainer binary...
[2026-03-09 06:16:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 06:16:24] Running /usr/bin/apptainer --version
[2026-03-09 06:16:24] apptainer version 1.3.2-1.el7
[2026-03-09 06:16:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 06:16:25] c-205-31.aglt2.org
[2026-03-09 06:16:25] apptainer works
[2026-03-09 06:16:25] Set ATHENA_PROC_NUMBER=12
[2026-03-09 06:16:25] Set ATHENA_CORE_NUMBER=12
[2026-03-09 06:16:25] Starting ATLAS job with PandaID=7034564422
[2026-03-09 06:16:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 07:13:56]  *** The last 200 lines of the pilot log: ***
[2026-03-09 07:13:56]  is_tar=False
[2026-03-09 07:13:56]  lfn=log.48700946._002529.job.log.tgz.1
[2026-03-09 07:13:56]  mtime=0
[2026-03-09 07:13:56]  protocol_id=None
[2026-03-09 07:13:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-09 07:13:56]  replicas=None
[2026-03-09 07:13:56]  scope=mc23_13p6TeV
[2026-03-09 07:13:56]  status=None
[2026-03-09 07:13:56]  status_code=0
[2026-03-09 07:13:56]  storage_token=
[2026-03-09 07:13:56]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7034564422/log.48700946._002529.job.log.tgz.1
[2026-03-09 07:13:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ac/c5/log.48700946._002529.job.log.tgz.1
[2026-03-09 07:13:56]  workdir=None
[2026-03-09 07:13:56] ]
[2026-03-09 07:13:56] 2026-03-09 11:12:49,417 | INFO     | transferring file log.48700946._002529.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7034564422/log.48700946._002529.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-09 07:13:56] 2026-03-09 11:12:49,418 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7034564422/log.48700946._002529.job.log.tgz.1 /tmp/boinchome/slots/0/log.48700946._002529.job
[2026-03-09 07:13:56] 2026-03-09 11:12:49,439 | INFO     | adding to output.list: log.48700946._002529.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ac/c5/log.48700946._002529.job.log.tg
[2026-03-09 07:13:56] 2026-03-09 11:12:49,440 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-09 07:13:56] 2026-03-09 11:12:49,440 | INFO     | summary of transferred files:
[2026-03-09 07:13:56] 2026-03-09 11:12:49,440 | INFO     |  -- lfn=log.48700946._002529.job.log.tgz.1, status_code=0, status=transferred
[2026-03-09 07:13:56] 2026-03-09 11:12:49,440 | INFO     | stage-out finished correctly
[2026-03-09 07:13:56] 2026-03-09 11:12:50,575 | WARNING  | process 722 can no longer be monitored (due to stat problems) - aborting
[2026-03-09 07:13:56] 2026-03-09 11:12:50,575 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7034564422/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 07:13:56] 2026-03-09 11:12:50,658 | INFO     | number of running child processes to parent process 722: 1
[2026-03-09 07:13:56] 2026-03-09 11:12:50,658 | INFO     | maximum number of monitored processes: 6
[2026-03-09 07:13:56] 2026-03-09 11:12:51,123 | INFO     | time since job start (3365s) is within the limit (349056.0s)
[2026-03-09 07:13:56] 2026-03-09 11:12:52,234 | INFO     | PID=28724 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-09 07:13:56] 2026-03-09 11:12:52,899 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-09 07:13:56] 2026-03-09 11:12:53,161 | INFO     | monitor loop #257: job 0:7034564422 is in state 'finished'
[2026-03-09 07:13:56] 2026-03-09 11:12:53,162 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-09 07:13:56] 2026-03-09 11:12:53,235 | INFO     | time since job start (3367s) is within the limit (349056.0s)
[2026-03-09 07:13:56] 2026-03-09 11:12:54,067 | INFO     | job 7034564422 has state=finished
[2026-03-09 07:13:56] 2026-03-09 11:12:54,068 | INFO     | preparing for final server update for job 7034564422 in state='finished'
[2026-03-09 07:13:56] 2026-03-09 11:12:54,068 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7034564422/jobReport.json
[2026-03-09 07:13:56] 2026-03-09 11:12:54,071 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-09 07:13:56] 2026-03-09 11:12:54,072 | INFO     | this job has now completed (state=finished)
[2026-03-09 07:13:56] 2026-03-09 11:12:54,072 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 07:13:56] 2026-03-09 11:12:54,072 | INFO     | log transfer has been attempted: DONE
[2026-03-09 07:13:56] 2026-03-09 11:12:54,072 | INFO     | job 7034564422 has finished - writing final server update
[2026-03-09 07:13:56] 2026-03-09 11:12:54,073 | INFO     | total number of processed events: 400 (read)
[2026-03-09 07:13:56] 2026-03-09 11:12:54,075 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7034564422/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 07:13:56] 2026-03-09 11:12:54,075 | INFO     | extracted standard info from prmon json
[2026-03-09 07:13:56] 2026-03-09 11:12:54,075 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 07:13:56] 2026-03-09 11:12:54,076 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 07:13:56] 2026-03-09 11:12:54,076 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 07:13:56] 2026-03-09 11:12:54,076 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 07:13:56] 2026-03-09 11:12:54,077 | INFO     | fitting pss+swap vs Time
[2026-03-09 07:13:56] 2026-03-09 11:12:54,077 | INFO     | sum of square deviations: 34277852.0
[2026-03-09 07:13:56] 2026-03-09 11:12:54,077 | INFO     | sum of deviations: 463159030.9999998
[2026-03-09 07:13:56] 2026-03-09 11:12:54,078 | INFO     | mean x: 1773053168.5
[2026-03-09 07:13:56] 2026-03-09 11:12:54,078 | INFO     | mean y: 2637204.4583333335
[2026-03-09 07:13:56] 2026-03-09 11:12:54,078 | INFO     | intersect: -23954686242.586697
[2026-03-09 07:13:56] 2026-03-09 11:12:54,078 | INFO     | chi2: 0.014537637777328291
[2026-03-09 07:13:56] 2026-03-09 11:12:54,078 | INFO     | current memory leak: 13.51 B/s (using 48 data points, chi2=0.01)
[2026-03-09 07:13:56] 2026-03-09 11:12:54,078 | INFO     | could have reported an average CPU frequency of 1651 MHz (5 samples)
[2026-03-09 07:13:56] 2026-03-09 11:12:54,079 | INFO     | ..............................
[2026-03-09 07:13:56] 2026-03-09 11:12:54,079 | INFO     | . Timing measurements:
[2026-03-09 07:13:56] 2026-03-09 11:12:54,079 | INFO     | . get job = 0 s
[2026-03-09 07:13:56] 2026-03-09 11:12:54,079 | INFO     | . initial setup = 7 s
[2026-03-09 07:13:56] 2026-03-09 11:12:54,079 | INFO     | . payload setup = 7 s
[2026-03-09 07:13:56] 2026-03-09 11:12:54,079 | INFO     | . stage-in = 0 s
[2026-03-09 07:13:56] 2026-03-09 11:12:54,079 | INFO     | . payload execution = 3339 s
[2026-03-09 07:13:56] 2026-03-09 11:12:54,079 | INFO     | . stage-out = 0 s
[2026-03-09 07:13:56] 2026-03-09 11:12:54,079 | INFO     | . log creation = 0 s
[2026-03-09 07:13:56] 2026-03-09 11:12:54,079 | INFO     | ..............................
[2026-03-09 07:13:56] 2026-03-09 11:12:54,156 | INFO     | 
[2026-03-09 07:13:56] 2026-03-09 11:12:54,156 | INFO     | job summary report
[2026-03-09 07:13:56] 2026-03-09 11:12:54,156 | INFO     | --------------------------------------------------
[2026-03-09 07:13:56] 2026-03-09 11:12:54,156 | INFO     | PanDA job id: 7034564422
[2026-03-09 07:13:56] 2026-03-09 11:12:54,156 | INFO     | task id: 48700946
[2026-03-09 07:13:56] 2026-03-09 11:12:54,156 | INFO     | errors: (none)
[2026-03-09 07:13:56] 2026-03-09 11:12:54,157 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 07:13:56] 2026-03-09 11:12:54,157 | INFO     | pilot state: finished 
[2026-03-09 07:13:56] 2026-03-09 11:12:54,157 | INFO     | transexitcode: 0
[2026-03-09 07:13:56] 2026-03-09 11:12:54,157 | INFO     | exeerrorcode: 0
[2026-03-09 07:13:56] 2026-03-09 11:12:54,157 | INFO     | exeerrordiag: 
[2026-03-09 07:13:56] 2026-03-09 11:12:54,157 | INFO     | exitcode: 0
[2026-03-09 07:13:56] 2026-03-09 11:12:54,158 | INFO     | exitmsg: OK
[2026-03-09 07:13:56] 2026-03-09 11:12:54,158 | INFO     | cpuconsumptiontime: 34277 s
[2026-03-09 07:13:56] 2026-03-09 11:12:54,158 | INFO     | nevents: 400
[2026-03-09 07:13:56] 2026-03-09 11:12:54,158 | INFO     | neventsw: 0
[2026-03-09 07:13:56] 2026-03-09 11:12:54,158 | INFO     | pid: 722
[2026-03-09 07:13:56] 2026-03-09 11:12:54,158 | INFO     | pgrp: 722
[2026-03-09 07:13:56] 2026-03-09 11:12:54,159 | INFO     | corecount: 12
[2026-03-09 07:13:56] 2026-03-09 11:12:54,159 | INFO     | event service: False
[2026-03-09 07:13:56] 2026-03-09 11:12:54,159 | INFO     | sizes: {0: 2279947, 1: 2280181, 11: 2280181, 3350: 2305653, 3352: 2314651, 3355: 2314707, 3356: 2315061}
[2026-03-09 07:13:56] 2026-03-09 11:12:54,159 | INFO     | --------------------------------------------------
[2026-03-09 07:13:56] 2026-03-09 11:12:54,159 | INFO     | 
[2026-03-09 07:13:56] 2026-03-09 11:12:54,159 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-09 07:13:56] 2026-03-09 11:12:54,183 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 07:13:56] 2026-03-09 11:12:54,184 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 07:13:56] 2026-03-09 11:12:54,184 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 07:13:56] 2026-03-09 11:12:54,184 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 07:13:56] 2026-03-09 11:12:54,184 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 07:13:56] 2026-03-09 11:12:54,184 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 07:13:56] 2026-03-09 11:12:54,185 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 07:13:56] 2026-03-09 11:12:54,185 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 07:13:56] 2026-03-09 11:12:54,185 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 07:13:56] 2026-03-09 11:12:54,185 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 07:13:56] 2026-03-09 11:12:54,185 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 07:13:56] 2026-03-09 11:12:54,185 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 07:13:56] 2026-03-09 11:12:54,186 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 07:13:56] 2026-03-09 11:12:54,186 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 07:13:56] 2026-03-09 11:12:54,186 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 07:13:56] 2026-03-09 11:12:54,186 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 07:13:56] 2026-03-09 11:12:54,186 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 07:13:56] 2026-03-09 11:12:54,186 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 07:13:56] 2026-03-09 11:12:54,187 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 07:13:56] 2026-03-09 11:12:54,187 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 07:13:56] 2026-03-09 11:12:54,187 | INFO     | job 7034564422 has completed (purged errors)
[2026-03-09 07:13:56] 2026-03-09 11:12:54,187 | INFO     | overall cleanup function is called
[2026-03-09 07:13:56] 2026-03-09 11:12:55,195 | INFO     | --- collectZombieJob: --- 10, [722]
[2026-03-09 07:13:56] 2026-03-09 11:12:55,195 | INFO     | zombie collector waiting for pid 722
[2026-03-09 07:13:56] 2026-03-09 11:12:55,196 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 07:13:56] 2026-03-09 11:12:55,196 | INFO     | collected zombie processes
[2026-03-09 07:13:56] 2026-03-09 11:12:55,196 | INFO     | will attempt to kill all subprocesses of pid=722
[2026-03-09 07:13:56] 2026-03-09 11:12:55,284 | INFO     | process IDs to be killed: [722] (in reverse order)
[2026-03-09 07:13:56] 2026-03-09 11:12:55,338 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 07:13:56] 2026-03-09 11:12:55,339 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 07:13:56] 2026-03-09 11:12:55,343 | INFO     | did not find any defunct processes belonging to 722
[2026-03-09 07:13:56] 2026-03-09 11:12:55,345 | INFO     | did not find any defunct processes belonging to 722
[2026-03-09 07:13:56] 2026-03-09 11:12:55,346 | INFO     | ready for new job
[2026-03-09 07:13:56] 2026-03-09 11:12:55,346 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 07:13:56] 2026-03-09 11:12:55,347 | INFO     | **************************************
[2026-03-09 07:13:56] 2026-03-09 11:12:55,347 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 07:13:56] 2026-03-09 11:12:55,347 | INFO     | **************************************
[2026-03-09 07:13:56] 2026-03-09 11:12:55,347 | INFO     | 
[2026-03-09 07:13:56] 2026-03-09 11:12:55,348 | INFO     | architecture information:
[2026-03-09 07:13:56] 2026-03-09 11:12:55,348 | INFO     | executing command: cat /etc/os-release
[2026-03-09 07:13:56] 2026-03-09 11:12:55,365 | INFO     | cat /etc/os-release:
[2026-03-09 07:13:56] NAME="CentOS Linux"
[2026-03-09 07:13:56] VERSION="7 (Core)"
[2026-03-09 07:13:56] ID="centos"
[2026-03-09 07:13:56] ID_LIKE="rhel fedora"
[2026-03-09 07:13:56] VERSION_ID="7"
[2026-03-09 07:13:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 07:13:56] ANSI_COLOR="0;31"
[2026-03-09 07:13:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 07:13:56] HOME_URL="https://www.centos.org/"
[2026-03-09 07:13:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 07:13:56] 
[2026-03-09 07:13:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 07:13:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 07:13:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 07:13:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 07:13:56] 
[2026-03-09 07:13:56] 2026-03-09 11:12:55,365 | INFO     | **************************************
[2026-03-09 07:13:56] 2026-03-09 11:12:55,868 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-09 07:13:56] 2026-03-09 11:12:55,886 | INFO     | sufficient remaining disk space (29455548416 B)
[2026-03-09 07:13:56] 2026-03-09 11:12:55,886 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 07:13:56] 2026-03-09 11:12:55,886 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 07:13:56] 2026-03-09 11:12:55,886 | INFO     | update_server=False
[2026-03-09 07:13:56] 2026-03-09 11:12:55,886 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 07:13:56] 2026-03-09 11:12:55,887 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 07:13:56] 2026-03-09 11:12:55,887 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 07:13:56] 2026-03-09 11:12:56,139 | INFO     | all data control threads have been joined
[2026-03-09 07:13:56] 2026-03-09 11:12:56,397 | INFO     | all job control threads have been joined
[2026-03-09 07:13:56] 2026-03-09 11:12:56,671 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 07:13:56] 2026-03-09 11:12:56,671 | INFO     | aborting loop
[2026-03-09 07:13:56] 2026-03-09 11:12:56,892 | INFO     | [job] retrieve thread has finished
[2026-03-09 07:13:56] 2026-03-09 11:12:56,893 | INFO     | [job] queue monitor thread has finished
[2026-03-09 07:13:56] 2026-03-09 11:12:56,896 | INFO     | [data] copytool_in thread has finished
[2026-03-09 07:13:56] 2026-03-09 11:12:57,083 | INFO     | [payload] validate_post thread has finished
[2026-03-09 07:13:56] 2026-03-09 11:12:57,144 | INFO     | [data] control thread has finished
[2026-03-09 07:13:56] 2026-03-09 11:12:57,222 | INFO     | all payload control threads have been joined
[2026-03-09 07:13:56] 2026-03-09 11:12:57,403 | INFO     | [job] control thread has finished
[2026-03-09 07:13:56] 2026-03-09 11:12:57,580 | INFO     | [job] validate thread has finished
[2026-03-09 07:13:56] 2026-03-09 11:12:57,676 | INFO     | [job] job monitor thread has finished
[2026-03-09 07:13:56] 2026-03-09 11:12:57,831 | INFO     | [payload] failed_post thread has finished
[2026-03-09 07:13:56] 2026-03-09 11:12:57,848 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 07:13:56] 2026-03-09 11:12:57,893 | INFO     | [data] copytool_out thread has finished
[2026-03-09 07:13:56] 2026-03-09 11:12:58,005 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 07:13:56] 2026-03-09 11:12:58,068 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 07:13:56] 2026-03-09 11:12:58,228 | INFO     | [payload] control thread has finished
[2026-03-09 07:13:56] 2026-03-09 11:12:58,983 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 07:13:56] 2026-03-09 11:13:02,984 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 07:13:56] 2026-03-09 11:13:06,101 | INFO     | job.realtimelogging is not enabled
[2026-03-09 07:13:56] 2026-03-09 11:13:07,106 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 07:13:56] 2026-03-09 11:13:26,433 | INFO     | PID=28724 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-09 07:13:56] 2026-03-09 11:13:26,434 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 07:13:56] 2026-03-09 11:13:26,434 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 07:13:56] 2026-03-09 11:13:26,434 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 07:13:56] 2026-03-09 11:13:51,470 | INFO     | [monitor] cgroup control has ended
[2026-03-09 07:13:56] 2026-03-09 11:13:51,534 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140714676528960)>', '<ExcThread(monitor, started 140713647920896)>']
[2026-03-09 07:13:56] 2026-03-09 11:13:51,561 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 07:13:56] 2026-03-09 11:13:51,562 | INFO     | [monitor] control thread has ended
[2026-03-09 07:13:56] 2026-03-09 11:13:56,555 | INFO     | all workflow threads have been joined
[2026-03-09 07:13:56] 2026-03-09 11:13:56,555 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 07:13:56] 2026-03-09 11:13:56,564 | INFO     | traces error code: 0
[2026-03-09 07:13:56] 2026-03-09 11:13:56,564 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 07:13:56] 2026-03-09 11:13:56,655 [wrapper] ==== pilot stdout END ====
[2026-03-09 07:13:56] 2026-03-09 11:13:56,659 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 07:13:56] 2026-03-09 11:13:56,662 [wrapper] pilotpid: 28724
[2026-03-09 07:13:56] 2026-03-09 11:13:56,666 [wrapper] Pilot exit status: 0
[2026-03-09 07:13:56] 2026-03-09 11:13:56,682 [wrapper] pandaids: 7034564422
[2026-03-09 07:13:56] 2026-03-09 11:13:56,727 [wrapper] cleanup supervisor_pilot 15586 28725
[2026-03-09 07:13:56] 2026-03-09 11:13:56,731 [wrapper] Test setup, not cleaning
[2026-03-09 07:13:56] 2026-03-09 11:13:56,735 [wrapper] apfmon messages muted
[2026-03-09 07:13:56] 2026-03-09 11:13:56,739 [wrapper] ==== wrapper stdout END ====
[2026-03-09 07:13:56] 2026-03-09 11:13:56,743 [wrapper] ==== wrapper stderr END ====
[2026-03-09 07:13:56]  *** Error codes and diagnostics ***
[2026-03-09 07:13:56]     "exeErrorCode": 0,
[2026-03-09 07:13:56]     "exeErrorDiag": "",
[2026-03-09 07:13:56]     "pilotErrorCode": 0,
[2026-03-09 07:13:56]     "pilotErrorDiag": "",
[2026-03-09 07:13:56]  *** Listing of results directory ***
[2026-03-09 07:13:56] total 323416
[2026-03-09 07:13:56] -rw-r--r-- 1 boincer umatlas    584627 Mar  1 02:27 pilot3.tar.gz
[2026-03-09 07:13:56] -rw-r--r-- 1 boincer umatlas      5111 Mar  1 02:28 queuedata.json
[2026-03-09 07:13:56] -rwx------ 1 boincer umatlas     36322 Mar  1 02:28 runpilot2-wrapper.sh
[2026-03-09 07:13:56] -rw-r--r-- 1 boincer umatlas       100 Mar  9 06:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 07:13:56] -rwxr-xr-x 1 boincer umatlas      7986 Mar  9 06:16 run_atlas
[2026-03-09 07:13:56] -rw-r--r-- 1 boincer umatlas       105 Mar  9 06:16 job.xml
[2026-03-09 07:13:56] -rw-r--r-- 2 boincer umatlas 188090509 Mar  9 06:16 EVNT.48700944._000099.pool.root.1
[2026-03-09 07:13:56] -rw-r--r-- 2 boincer umatlas     15845 Mar  9 06:16 start_atlas.sh
[2026-03-09 07:13:56] drwxrwx--x 2 boincer umatlas      4096 Mar  9 06:16 shared
[2026-03-09 07:13:56] -rw-r--r-- 2 boincer umatlas    597937 Mar  9 06:16 input.tar.gz
[2026-03-09 07:13:56] -rw-r--r-- 1 boincer umatlas         0 Mar  9 06:16 boinc_lockfile
[2026-03-09 07:13:56] -rw-r--r-- 1 boincer umatlas      2499 Mar  9 06:16 pandaJob.out
[2026-03-09 07:13:56] -rw------- 1 boincer umatlas        57 Mar  9 06:16 setup.sh.local
[2026-03-09 07:13:56] -rw------- 1 boincer umatlas    987066 Mar  9 06:16 agis_schedconf.cvmfs.json
[2026-03-09 07:13:56] -rw------- 1 boincer umatlas   1511578 Mar  9 06:16 agis_ddmendpoints.agis.ALL.json
[2026-03-09 07:13:56] -rw------- 1 boincer umatlas       445 Mar  9 06:16 workernode_map.json
[2026-03-09 07:13:56] drwx------ 5 boincer umatlas      4096 Mar  9 06:16 pilot3
[2026-03-09 07:13:56] -rw-r--r-- 1 boincer umatlas      5952 Mar  9 07:11 init_data.xml
[2026-03-09 07:13:56] -rw------- 1 boincer umatlas 137443146 Mar  9 07:12 HITS.48700946._002529.pool.root.1
[2026-03-09 07:13:56] -rw-r--r-- 1 boincer umatlas       529 Mar  9 07:12 boinc_task_state.xml
[2026-03-09 07:13:56] -rw------- 1 boincer umatlas      1042 Mar  9 07:12 memory_monitor_summary.json
[2026-03-09 07:13:56] -rw------- 1 boincer umatlas    361630 Mar  9 07:12 log.48700946._002529.job.log.tgz.1
[2026-03-09 07:13:56] -rw------- 1 boincer umatlas      6411 Mar  9 07:12 heartbeat.json
[2026-03-09 07:13:56] -rw------- 1 boincer umatlas        95 Mar  9 07:13 pilot_heartbeat.json
[2026-03-09 07:13:56] -rw-r--r-- 1 boincer umatlas        27 Mar  9 07:13 wrapper_checkpoint.txt
[2026-03-09 07:13:56] -rw-r--r-- 1 boincer umatlas      8192 Mar  9 07:13 boinc_mmap_file
[2026-03-09 07:13:56] -rw------- 1 boincer umatlas      4814 Mar  9 07:13 pilotlog.txt
[2026-03-09 07:13:56] -rw------- 1 boincer umatlas    501402 Mar  9 07:13 log.48700946._002529.job.log.1
[2026-03-09 07:13:56] -rw------- 1 boincer umatlas       357 Mar  9 07:13 output.list
[2026-03-09 07:13:56] -rw-r--r-- 1 boincer umatlas       620 Mar  9 07:13 runtime_log
[2026-03-09 07:13:56] -rw------- 1 boincer umatlas    880640 Mar  9 07:13 result.tar.gz
[2026-03-09 07:13:56] -rw-r--r-- 1 boincer umatlas      9343 Mar  9 07:13 runtime_log.err
[2026-03-09 07:13:56] -rw------- 1 boincer umatlas       658 Mar  9 07:13 1jIODmAPqG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmST7KDmnt710m.diag
[2026-03-09 07:13:56] -rw-r--r-- 1 boincer umatlas     21662 Mar  9 07:13 stderr.txt
[2026-03-09 07:13:56] HITS file was successfully produced:
[2026-03-09 07:13:56] -rw------- 1 boincer umatlas 137443146 Mar  9 07:12 shared/HITS.pool.root.1
[2026-03-09 07:13:56]  *** Contents of shared directory: ***
[2026-03-09 07:13:56] total 319372
[2026-03-09 07:13:56] -rw-r--r-- 2 boincer umatlas 188090509 Mar  9 06:16 ATLAS.root_0
[2026-03-09 07:13:56] -rw-r--r-- 2 boincer umatlas     15845 Mar  9 06:16 start_atlas.sh
[2026-03-09 07:13:56] -rw-r--r-- 2 boincer umatlas    597937 Mar  9 06:16 input.tar.gz
[2026-03-09 07:13:56] -rw------- 1 boincer umatlas 137443146 Mar  9 07:12 HITS.pool.root.1
[2026-03-09 07:13:56] -rw------- 1 boincer umatlas    880640 Mar  9 07:13 result.tar.gz
07:13:58 (24747): run_atlas exited; CPU time 34259.412345
07:13:58 (24747): called boinc_finish(0)

</stderr_txt>
]]>

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