Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:17:09 (383591): wrapper (7.7.26015): starting
18:17:09 (383591): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 18:17:09] Arguments: --nthreads 4
[2026-03-09 18:17:09] Threads: 4
[2026-03-09 18:17:09] Checking for CVMFS
[2026-03-09 18:17:09] No cvmfs_config command found, will try listing directly
[2026-03-09 18:17:09] CVMFS is ok
[2026-03-09 18:17:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 18:17:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 18:17:09] Further information can be found at the LHC@home message board.
[2026-03-09 18:17:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 18:17:09] Checking for apptainer binary...
[2026-03-09 18:17:09] which: no apptainer in ((null))
[2026-03-09 18:17:09] apptainer is not installed, using version from CVMFS
[2026-03-09 18:17:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 18:17:09] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot16/slots/6/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2026-03-09 18:17:09] apptainer works
[2026-03-09 18:17:09] Set ATHENA_PROC_NUMBER=4
[2026-03-09 18:17:09] Set ATHENA_CORE_NUMBER=4
[2026-03-09 18:17:09] Starting ATLAS job with PandaID=7040789370
[2026-03-09 18:17:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot16/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 19:27:33]  *** The last 200 lines of the pilot log: ***
[2026-03-09 19:27:33]  is_tar=False
[2026-03-09 19:27:33]  lfn=log.48955006._034646.job.log.tgz.1
[2026-03-09 19:27:33]  mtime=0
[2026-03-09 19:27:33]  protocol_id=None
[2026-03-09 19:27:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-09 19:27:33]  replicas=None
[2026-03-09 19:27:33]  scope=mc23_13p6TeV
[2026-03-09 19:27:33]  status=None
[2026-03-09 19:27:33]  status_code=0
[2026-03-09 19:27:33]  storage_token=
[2026-03-09 19:27:33]  surl=/var/lib/boinc/var/slot16/slots/6/PanDA_Pilot-7040789370/log.48955006._034646.job.log.tgz.1
[2026-03-09 19:27:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d0/12/log.48955006._034646.job.log.tgz.1
[2026-03-09 19:27:33]  workdir=None
[2026-03-09 19:27:33] ]
[2026-03-09 19:27:33] 2026-03-09 18:26:55,526 | INFO     | transferring file log.48955006._034646.job.log.tgz.1 from /var/lib/boinc/var/slot16/slots/6/PanDA_Pilot-7040789370/log.48955006._034646.job.log.tgz.1 to /var/lib/b
[2026-03-09 19:27:33] 2026-03-09 18:26:55,526 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot16/slots/6/PanDA_Pilot-7040789370/log.48955006._034646.job.log.tgz.1 /var/lib/boinc/var/slot16/slots/6/lo
[2026-03-09 19:27:33] 2026-03-09 18:26:55,541 | INFO     | adding to output.list: log.48955006._034646.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d0/12/log.48955006._034646.job.log.tg
[2026-03-09 19:27:33] 2026-03-09 18:26:55,541 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-09 19:27:33] 2026-03-09 18:26:55,541 | INFO     | summary of transferred files:
[2026-03-09 19:27:33] 2026-03-09 18:26:55,541 | INFO     |  -- lfn=log.48955006._034646.job.log.tgz.1, status_code=0, status=transferred
[2026-03-09 19:27:33] 2026-03-09 18:26:55,542 | INFO     | stage-out finished correctly
[2026-03-09 19:27:33] 2026-03-09 18:26:55,777 | INFO     | time since job start (4174s) is within the limit (349056.0s)
[2026-03-09 19:27:33] 2026-03-09 18:26:57,782 | INFO     | time since job start (4176s) is within the limit (349056.0s)
[2026-03-09 19:27:33] 2026-03-09 18:26:58,129 | WARNING  | process 393968 can no longer be monitored (due to stat problems) - aborting
[2026-03-09 19:27:33] 2026-03-09 18:26:58,130 | INFO     | using path: /var/lib/boinc/var/slot16/slots/6/PanDA_Pilot-7040789370/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 19:27:33] 2026-03-09 18:26:58,462 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-09 19:27:33] 2026-03-09 18:26:58,511 | INFO     | job 7040789370 has state=finished
[2026-03-09 19:27:33] 2026-03-09 18:26:58,511 | INFO     | preparing for final server update for job 7040789370 in state='finished'
[2026-03-09 19:27:33] 2026-03-09 18:26:58,511 | INFO     | reading metadata from: /var/lib/boinc/var/slot16/slots/6/PanDA_Pilot-7040789370/jobReport.json
[2026-03-09 19:27:33] 2026-03-09 18:26:58,514 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot16/slots/6/workernode_map.json
[2026-03-09 19:27:33] 2026-03-09 18:26:58,514 | INFO     | this job has now completed (state=finished)
[2026-03-09 19:27:33] 2026-03-09 18:26:58,514 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 19:27:33] 2026-03-09 18:26:58,514 | INFO     | log transfer has been attempted: DONE
[2026-03-09 19:27:33] 2026-03-09 18:26:58,514 | INFO     | job 7040789370 has finished - writing final server update
[2026-03-09 19:27:33] 2026-03-09 18:26:58,514 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3300023/.job.ad'
[2026-03-09 19:27:33] 2026-03-09 18:26:58,515 | INFO     | total number of processed events: 400 (read)
[2026-03-09 19:27:33] 2026-03-09 18:26:58,536 | INFO     | using path: /var/lib/boinc/var/slot16/slots/6/PanDA_Pilot-7040789370/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 19:27:33] 2026-03-09 18:26:58,537 | INFO     | extracted standard info from prmon json
[2026-03-09 19:27:33] 2026-03-09 18:26:58,537 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 19:27:33] 2026-03-09 18:26:58,537 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 19:27:33] 2026-03-09 18:26:58,537 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 19:27:33] 2026-03-09 18:26:58,537 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 19:27:33] 2026-03-09 18:26:58,539 | INFO     | fitting pss+swap vs Time
[2026-03-09 19:27:33] 2026-03-09 18:26:58,539 | INFO     | sum of square deviations: 73882315.5
[2026-03-09 19:27:33] 2026-03-09 18:26:58,539 | INFO     | sum of deviations: -550610247.4999999
[2026-03-09 19:27:33] 2026-03-09 18:26:58,539 | INFO     | mean x: 1773078826.5
[2026-03-09 19:27:33] 2026-03-09 18:26:58,539 | INFO     | mean y: 2346056.9838709678
[2026-03-09 19:27:33] 2026-03-09 18:26:58,539 | INFO     | intersect: 13216270998.14485
[2026-03-09 19:27:33] 2026-03-09 18:26:58,539 | INFO     | chi2: 0.0009896986893224216
[2026-03-09 19:27:33] 2026-03-09 18:26:58,539 | INFO     | current memory leak: -7.45 B/s (using 62 data points, chi2=0.00)
[2026-03-09 19:27:33] 2026-03-09 18:26:58,539 | INFO     | could have reported an average CPU frequency of 3613 MHz (6 samples)
[2026-03-09 19:27:33] 2026-03-09 18:26:58,539 | INFO     | ..............................
[2026-03-09 19:27:33] 2026-03-09 18:26:58,540 | INFO     | . Timing measurements:
[2026-03-09 19:27:33] 2026-03-09 18:26:58,540 | INFO     | . get job = 0 s
[2026-03-09 19:27:33] 2026-03-09 18:26:58,540 | INFO     | . initial setup = 4 s
[2026-03-09 19:27:33] 2026-03-09 18:26:58,540 | INFO     | . payload setup = 4 s
[2026-03-09 19:27:33] 2026-03-09 18:26:58,540 | INFO     | . stage-in = 0 s
[2026-03-09 19:27:33] 2026-03-09 18:26:58,540 | INFO     | . payload execution = 4153 s
[2026-03-09 19:27:33] 2026-03-09 18:26:58,540 | INFO     | . stage-out = 0 s
[2026-03-09 19:27:33] 2026-03-09 18:26:58,540 | INFO     | . log creation = 0 s
[2026-03-09 19:27:33] 2026-03-09 18:26:58,540 | INFO     | ..............................
[2026-03-09 19:27:33] 2026-03-09 18:26:58,659 | INFO     | number of running child processes to parent process 393968: 1
[2026-03-09 19:27:33] 2026-03-09 18:26:58,660 | INFO     | maximum number of monitored processes: 6
[2026-03-09 19:27:33] 2026-03-09 18:26:58,660 | INFO     | aborting job monitoring since job object (job id=7040789370) has expired
[2026-03-09 19:27:33] 2026-03-09 18:26:59,089 | INFO     | 
[2026-03-09 19:27:33] 2026-03-09 18:26:59,089 | INFO     | job summary report
[2026-03-09 19:27:33] 2026-03-09 18:26:59,089 | INFO     | --------------------------------------------------
[2026-03-09 19:27:33] 2026-03-09 18:26:59,089 | INFO     | PanDA job id: 7040789370
[2026-03-09 19:27:33] 2026-03-09 18:26:59,089 | INFO     | task id: 48955006
[2026-03-09 19:27:33] 2026-03-09 18:26:59,089 | INFO     | errors: (none)
[2026-03-09 19:27:33] 2026-03-09 18:26:59,089 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 19:27:33] 2026-03-09 18:26:59,089 | INFO     | pilot state: finished 
[2026-03-09 19:27:33] 2026-03-09 18:26:59,089 | INFO     | transexitcode: 0
[2026-03-09 19:27:33] 2026-03-09 18:26:59,089 | INFO     | exeerrorcode: 0
[2026-03-09 19:27:33] 2026-03-09 18:26:59,089 | INFO     | exeerrordiag: 
[2026-03-09 19:27:33] 2026-03-09 18:26:59,089 | INFO     | exitcode: 0
[2026-03-09 19:27:33] 2026-03-09 18:26:59,090 | INFO     | exitmsg: OK
[2026-03-09 19:27:33] 2026-03-09 18:26:59,090 | INFO     | cpuconsumptiontime: 15842 s
[2026-03-09 19:27:33] 2026-03-09 18:26:59,090 | INFO     | nevents: 400
[2026-03-09 19:27:33] 2026-03-09 18:26:59,090 | INFO     | neventsw: 0
[2026-03-09 19:27:33] 2026-03-09 18:26:59,090 | INFO     | pid: 393968
[2026-03-09 19:27:33] 2026-03-09 18:26:59,090 | INFO     | pgrp: 393968
[2026-03-09 19:27:33] 2026-03-09 18:26:59,090 | INFO     | corecount: 4
[2026-03-09 19:27:33] 2026-03-09 18:26:59,090 | INFO     | event service: False
[2026-03-09 19:27:33] 2026-03-09 18:26:59,090 | INFO     | sizes: {0: 2280243, 11: 2280243, 4161: 2306264, 4163: 2315284, 4166: 2315534}
[2026-03-09 19:27:33] 2026-03-09 18:26:59,090 | INFO     | --------------------------------------------------
[2026-03-09 19:27:33] 2026-03-09 18:26:59,090 | INFO     | 
[2026-03-09 19:27:33] 2026-03-09 18:26:59,090 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot16/slots/6
[2026-03-09 19:27:33] 2026-03-09 18:26:59,108 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 19:27:33] 2026-03-09 18:26:59,108 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 19:27:33] 2026-03-09 18:26:59,108 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 19:27:33] 2026-03-09 18:26:59,108 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 19:27:33] 2026-03-09 18:26:59,108 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 19:27:33] 2026-03-09 18:26:59,108 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 19:27:33] 2026-03-09 18:26:59,108 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 19:27:33] 2026-03-09 18:26:59,108 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 19:27:33] 2026-03-09 18:26:59,108 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 19:27:33] 2026-03-09 18:26:59,108 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 19:27:33] 2026-03-09 18:26:59,108 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 19:27:33] 2026-03-09 18:26:59,108 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 19:27:33] 2026-03-09 18:26:59,108 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 19:27:33] 2026-03-09 18:26:59,108 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 19:27:33] 2026-03-09 18:26:59,108 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 19:27:33] 2026-03-09 18:26:59,108 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 19:27:33] 2026-03-09 18:26:59,108 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 19:27:33] 2026-03-09 18:26:59,109 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 19:27:33] 2026-03-09 18:26:59,109 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 19:27:33] 2026-03-09 18:26:59,109 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 19:27:33] 2026-03-09 18:26:59,109 | INFO     | job 7040789370 has completed (purged errors)
[2026-03-09 19:27:33] 2026-03-09 18:26:59,109 | INFO     | overall cleanup function is called
[2026-03-09 19:27:33] 2026-03-09 18:27:00,115 | INFO     | --- collectZombieJob: --- 10, [393968]
[2026-03-09 19:27:33] 2026-03-09 18:27:00,115 | INFO     | zombie collector waiting for pid 393968
[2026-03-09 19:27:33] 2026-03-09 18:27:00,115 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 19:27:33] 2026-03-09 18:27:00,115 | INFO     | collected zombie processes
[2026-03-09 19:27:33] 2026-03-09 18:27:00,115 | INFO     | will attempt to kill all subprocesses of pid=393968
[2026-03-09 19:27:33] 2026-03-09 18:27:00,528 | INFO     | process IDs to be killed: [393968] (in reverse order)
[2026-03-09 19:27:33] 2026-03-09 18:27:00,710 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 19:27:33] 2026-03-09 18:27:00,711 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 19:27:33] 2026-03-09 18:27:00,732 | INFO     | did not find any defunct processes belonging to 393968
[2026-03-09 19:27:33] 2026-03-09 18:27:00,752 | INFO     | did not find any defunct processes belonging to 393968
[2026-03-09 19:27:33] 2026-03-09 18:27:00,752 | INFO     | ready for new job
[2026-03-09 19:27:33] 2026-03-09 18:27:00,752 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 19:27:33] 2026-03-09 18:27:00,753 | INFO     | **************************************
[2026-03-09 19:27:33] 2026-03-09 18:27:00,753 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 19:27:33] 2026-03-09 18:27:00,753 | INFO     | **************************************
[2026-03-09 19:27:33] 2026-03-09 18:27:00,753 | INFO     | 
[2026-03-09 19:27:33] 2026-03-09 18:27:00,759 | INFO     | architecture information:
[2026-03-09 19:27:33] 2026-03-09 18:27:00,759 | INFO     | executing command: cat /etc/os-release
[2026-03-09 19:27:33] 2026-03-09 18:27:00,771 | INFO     | cat /etc/os-release:
[2026-03-09 19:27:33] NAME="CentOS Linux"
[2026-03-09 19:27:33] VERSION="7 (Core)"
[2026-03-09 19:27:33] ID="centos"
[2026-03-09 19:27:33] ID_LIKE="rhel fedora"
[2026-03-09 19:27:33] VERSION_ID="7"
[2026-03-09 19:27:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 19:27:33] ANSI_COLOR="0;31"
[2026-03-09 19:27:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 19:27:33] HOME_URL="https://www.centos.org/"
[2026-03-09 19:27:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 19:27:33] 
[2026-03-09 19:27:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 19:27:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 19:27:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 19:27:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 19:27:33] 
[2026-03-09 19:27:33] 2026-03-09 18:27:00,771 | INFO     | **************************************
[2026-03-09 19:27:33] 2026-03-09 18:27:01,273 | INFO     | executing command: df -mP /var/lib/boinc/var/slot16/slots/6
[2026-03-09 19:27:33] 2026-03-09 18:27:01,288 | INFO     | sufficient remaining disk space (20194525184 B)
[2026-03-09 19:27:33] 2026-03-09 18:27:01,288 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 19:27:33] 2026-03-09 18:27:01,288 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 19:27:33] 2026-03-09 18:27:01,288 | INFO     | update_server=False
[2026-03-09 19:27:33] 2026-03-09 18:27:01,289 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 19:27:33] 2026-03-09 18:27:01,289 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 19:27:33] 2026-03-09 18:27:01,702 | INFO     | all payload control threads have been joined
[2026-03-09 19:27:33] 2026-03-09 18:27:01,799 | INFO     | all job control threads have been joined
[2026-03-09 19:27:33] 2026-03-09 18:27:02,168 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 19:27:33] 2026-03-09 18:27:02,168 | INFO     | aborting loop
[2026-03-09 19:27:33] 2026-03-09 18:27:02,265 | INFO     | all data control threads have been joined
[2026-03-09 19:27:33] 2026-03-09 18:27:02,293 | INFO     | [job] retrieve thread has finished
[2026-03-09 19:27:33] 2026-03-09 18:27:02,707 | INFO     | [payload] control thread has finished
[2026-03-09 19:27:33] 2026-03-09 18:27:02,762 | INFO     | [payload] validate_post thread has finished
[2026-03-09 19:27:33] 2026-03-09 18:27:02,804 | INFO     | [job] control thread has finished
[2026-03-09 19:27:33] 2026-03-09 18:27:03,091 | INFO     | [job] validate thread has finished
[2026-03-09 19:27:33] 2026-03-09 18:27:03,173 | INFO     | [job] job monitor thread has finished
[2026-03-09 19:27:33] 2026-03-09 18:27:03,270 | INFO     | [data] control thread has finished
[2026-03-09 19:27:33] 2026-03-09 18:27:03,288 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 19:27:33] 2026-03-09 18:27:03,294 | INFO     | [data] copytool_out thread has finished
[2026-03-09 19:27:33] 2026-03-09 18:27:03,331 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 19:27:33] 2026-03-09 18:27:03,466 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 19:27:33] 2026-03-09 18:27:03,600 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 19:27:33] 2026-03-09 18:27:03,617 | INFO     | [data] copytool_in thread has finished
[2026-03-09 19:27:33] 2026-03-09 18:27:03,721 | INFO     | [payload] failed_post thread has finished
[2026-03-09 19:27:33] 2026-03-09 18:27:04,517 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 19:27:33] 2026-03-09 18:27:04,605 | INFO     | [job] queue monitor thread has finished
[2026-03-09 19:27:33] 2026-03-09 18:27:08,522 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 19:27:33] 2026-03-09 18:27:11,911 | INFO     | job.realtimelogging is not enabled
[2026-03-09 19:27:33] 2026-03-09 18:27:12,916 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 19:27:33] 2026-03-09 18:27:27,276 | INFO     | [monitor] cgroup control has ended
[2026-03-09 19:27:33] 2026-03-09 18:27:28,141 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23078378956608)>', '<ExcThread(monitor, started 23078139864832)>']
[2026-03-09 19:27:33] 2026-03-09 18:27:31,341 | INFO     | PID=388106 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-09 19:27:33] 2026-03-09 18:27:31,341 | INFO     | .. there are 56 such processes running
[2026-03-09 19:27:33] 2026-03-09 18:27:31,344 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 19:27:33] 2026-03-09 18:27:31,344 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 19:27:33] 2026-03-09 18:27:31,344 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 19:27:33] 2026-03-09 18:27:31,344 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 19:27:33] 2026-03-09 18:27:31,344 | INFO     | [monitor] control thread has ended
[2026-03-09 19:27:33] 2026-03-09 18:27:33,166 | INFO     | all workflow threads have been joined
[2026-03-09 19:27:33] 2026-03-09 18:27:33,166 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 19:27:33] 2026-03-09 18:27:33,166 | INFO     | traces error code: 0
[2026-03-09 19:27:33] 2026-03-09 18:27:33,166 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 19:27:33] 2026-03-09 18:27:33,304 [wrapper] ==== pilot stdout END ====
[2026-03-09 19:27:33] 2026-03-09 18:27:33,306 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 19:27:33] 2026-03-09 18:27:33,308 [wrapper] pilotpid: 388106
[2026-03-09 19:27:33] 2026-03-09 18:27:33,310 [wrapper] Pilot exit status: 0
[2026-03-09 19:27:33] 2026-03-09 18:27:33,318 [wrapper] pandaids: 7040789370
[2026-03-09 19:27:33] 2026-03-09 18:27:33,428 [wrapper] cleanup supervisor_pilot 1233317 388107
[2026-03-09 19:27:33] 2026-03-09 18:27:33,431 [wrapper] Test setup, not cleaning
[2026-03-09 19:27:33] 2026-03-09 18:27:33,432 [wrapper] apfmon messages muted
[2026-03-09 19:27:33] 2026-03-09 18:27:33,435 [wrapper] ==== wrapper stdout END ====
[2026-03-09 19:27:33] 2026-03-09 18:27:33,437 [wrapper] ==== wrapper stderr END ====
[2026-03-09 19:27:33]  *** Error codes and diagnostics ***
[2026-03-09 19:27:33]     "exeErrorCode": 0,
[2026-03-09 19:27:33]     "exeErrorDiag": "",
[2026-03-09 19:27:33]     "pilotErrorCode": 0,
[2026-03-09 19:27:33]     "pilotErrorDiag": "",
[2026-03-09 19:27:33]  *** Listing of results directory ***
[2026-03-09 19:27:33] total 612372
[2026-03-09 19:27:33] -rw-r--r--. 1 boinc boinc    584627 Mar  9 10:23 pilot3.tar.gz
[2026-03-09 19:27:33] -rwx------. 1 boinc boinc     36322 Mar  9 10:26 runpilot2-wrapper.sh
[2026-03-09 19:27:33] -rw-r--r--. 1 boinc boinc      5111 Mar  9 10:27 queuedata.json
[2026-03-09 19:27:33] -rw-r--r--. 1 boinc boinc       100 Mar  9 18:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 19:27:33] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 18:17 run_atlas
[2026-03-09 19:27:33] -rw-r--r--. 1 boinc boinc       105 Mar  9 18:17 job.xml
[2026-03-09 19:27:33] -rw-r--r--. 2 boinc boinc 436718431 Mar  9 18:17 EVNT.46701403._000693.pool.root.1
[2026-03-09 19:27:33] -rw-r--r--. 2 boinc boinc     15845 Mar  9 18:17 start_atlas.sh
[2026-03-09 19:27:33] drwxrwx--x. 2 boinc boinc      4096 Mar  9 18:17 shared
[2026-03-09 19:27:33] -rw-r--r--. 2 boinc boinc    597963 Mar  9 18:17 input.tar.gz
[2026-03-09 19:27:33] -rw-r--r--. 1 boinc boinc         0 Mar  9 18:17 boinc_lockfile
[2026-03-09 19:27:33] -rw-r--r--. 1 boinc boinc      2565 Mar  9 18:17 pandaJob.out
[2026-03-09 19:27:33] -rw-------. 1 boinc boinc   1002716 Mar  9 18:17 agis_schedconf.cvmfs.json
[2026-03-09 19:27:33] -rw-------. 1 boinc boinc   1511578 Mar  9 18:17 agis_ddmendpoints.agis.ALL.json
[2026-03-09 19:27:33] -rw-------. 1 boinc boinc       444 Mar  9 18:17 workernode_map.json
[2026-03-09 19:27:33] drwx------. 5 boinc boinc      4096 Mar  9 18:17 pilot3
[2026-03-09 19:27:33] -rw-r--r--. 1 boinc boinc      6703 Mar  9 18:17 init_data.xml
[2026-03-09 19:27:33] -rw-------. 1 boinc boinc 184620478 Mar  9 19:26 HITS.48955006._034646.pool.root.1
[2026-03-09 19:27:33] -rw-r--r--. 1 boinc boinc       530 Mar  9 19:26 boinc_task_state.xml
[2026-03-09 19:27:33] -rw-------. 1 boinc boinc        95 Mar  9 19:26 pilot_heartbeat.json
[2026-03-09 19:27:33] -rw-------. 1 boinc boinc      1029 Mar  9 19:26 memory_monitor_summary.json
[2026-03-09 19:27:33] -rw-------. 1 boinc boinc    274512 Mar  9 19:26 log.48955006._034646.job.log.tgz.1
[2026-03-09 19:27:33] -rw-------. 1 boinc boinc      6357 Mar  9 19:26 heartbeat.json
[2026-03-09 19:27:33] -rw-r--r--. 1 boinc boinc      8192 Mar  9 19:27 boinc_mmap_file
[2026-03-09 19:27:33] -rw-r--r--. 1 boinc boinc        27 Mar  9 19:27 wrapper_checkpoint.txt
[2026-03-09 19:27:33] -rw-------. 1 boinc boinc      4900 Mar  9 19:27 pilotlog.txt
[2026-03-09 19:27:33] -rw-------. 1 boinc boinc    624100 Mar  9 19:27 log.48955006._034646.job.log.1
[2026-03-09 19:27:33] -rw-------. 1 boinc boinc       357 Mar  9 19:27 output.list
[2026-03-09 19:27:33] -rw-r--r--. 1 boinc boinc       620 Mar  9 19:27 runtime_log
[2026-03-09 19:27:33] -rw-------. 1 boinc boinc    911360 Mar  9 19:27 result.tar.gz
[2026-03-09 19:27:33] -rw-r--r--. 1 boinc boinc      9204 Mar  9 19:27 runtime_log.err
[2026-03-09 19:27:33] -rw-------. 1 boinc boinc       662 Mar  9 19:27 RjzMDmC4lJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmeTZLDmyeRwQn.diag
[2026-03-09 19:27:33] -rw-r--r--. 1 boinc boinc     21426 Mar  9 19:27 stderr.txt
[2026-03-09 19:27:33] HITS file was successfully produced:
[2026-03-09 19:27:33] -rw-------. 1 boinc boinc 184620478 Mar  9 19:26 shared/HITS.pool.root.1
[2026-03-09 19:27:33]  *** Contents of shared directory: ***
[2026-03-09 19:27:33] total 608280
[2026-03-09 19:27:33] -rw-r--r--. 2 boinc boinc 436718431 Mar  9 18:17 ATLAS.root_0
[2026-03-09 19:27:33] -rw-r--r--. 2 boinc boinc     15845 Mar  9 18:17 start_atlas.sh
[2026-03-09 19:27:33] -rw-r--r--. 2 boinc boinc    597963 Mar  9 18:17 input.tar.gz
[2026-03-09 19:27:33] -rw-------. 1 boinc boinc 184620478 Mar  9 19:26 HITS.pool.root.1
[2026-03-09 19:27:33] -rw-------. 1 boinc boinc    911360 Mar  9 19:27 result.tar.gz
19:27:34 (383591): run_atlas exited; CPU time 15990.154977
19:27:34 (383591): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN