Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:10:32 (3522219): wrapper (7.7.26015): starting
00:10:32 (3522219): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 00:10:32] Arguments: --nthreads 4
[2026-03-10 00:10:32] Threads: 4
[2026-03-10 00:10:32] Checking for CVMFS
[2026-03-10 00:10:32] No cvmfs_config command found, will try listing directly
[2026-03-10 00:10:32] CVMFS is ok
[2026-03-10 00:10:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 00:10:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 00:10:32] Further information can be found at the LHC@home message board.
[2026-03-10 00:10:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 00:10:32] Checking for apptainer binary...
[2026-03-10 00:10:32] which: no apptainer in ((null))
[2026-03-10 00:10:32] apptainer is not installed, using version from CVMFS
[2026-03-10 00:10:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 00:10:32] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot16/slots/6/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-03-10 00:10:32] apptainer works
[2026-03-10 00:10:32] Set ATHENA_PROC_NUMBER=4
[2026-03-10 00:10:32] Set ATHENA_CORE_NUMBER=4
[2026-03-10 00:10:32] Starting ATLAS job with PandaID=7040789712
[2026-03-10 00:10:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot16/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 02:54:22]  *** The last 200 lines of the pilot log: ***
[2026-03-10 02:54:22] 2026-03-10 01:53:38,015 | INFO     | total number of processed events: 400 (read)
[2026-03-10 02:54:22] 2026-03-10 01:53:38,040 | INFO     | using path: /var/lib/boinc/var/slot16/slots/6/PanDA_Pilot-7040789712/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 02:54:22] 2026-03-10 01:53:38,041 | INFO     | extracted standard info from prmon json
[2026-03-10 02:54:22] 2026-03-10 01:53:38,041 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 02:54:22] 2026-03-10 01:53:38,041 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 02:54:22] 2026-03-10 01:53:38,041 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 02:54:22] 2026-03-10 01:53:38,041 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 02:54:22] 2026-03-10 01:53:38,044 | INFO     | fitting pss+swap vs Time
[2026-03-10 02:54:22] 2026-03-10 01:53:38,045 | INFO     | sum of square deviations: 1270051720.0
[2026-03-10 02:54:22] 2026-03-10 01:53:38,046 | INFO     | sum of deviations: 8671209627.499996
[2026-03-10 02:54:22] 2026-03-10 01:53:38,046 | INFO     | mean x: 1773102740.5
[2026-03-10 02:54:22] 2026-03-10 01:53:38,046 | INFO     | mean y: 2292351.58125
[2026-03-10 02:54:22] 2026-03-10 01:53:38,046 | INFO     | intersect: -12103470990.064575
[2026-03-10 02:54:22] 2026-03-10 01:53:38,046 | INFO     | chi2: 2.1153372572081977
[2026-03-10 02:54:22] 2026-03-10 01:53:38,047 | INFO     | sum of square deviations: 1154663510.0
[2026-03-10 02:54:22] 2026-03-10 01:53:38,048 | INFO     | sum of deviations: 18303255997.0
[2026-03-10 02:54:22] 2026-03-10 01:53:38,048 | INFO     | mean x: 1773102588.0
[2026-03-10 02:54:22] 2026-03-10 01:53:38,048 | INFO     | mean y: 2304747.0129032256
[2026-03-10 02:54:22] 2026-03-10 01:53:38,048 | INFO     | intersect: -28104195801.45183
[2026-03-10 02:54:22] 2026-03-10 01:53:38,048 | INFO     | chi2: 1.3094636694332238
[2026-03-10 02:54:22] 2026-03-10 01:53:38,049 | INFO     | current chi2=1.3094636694332238 (change=38.096695221005014 %)
[2026-03-10 02:54:22] 2026-03-10 01:53:38,049 | INFO     | sum of square deviations: 1046484737.5
[2026-03-10 02:54:22] 2026-03-10 01:53:38,050 | INFO     | sum of deviations: 17755960031.999996
[2026-03-10 02:54:22] 2026-03-10 01:53:38,050 | INFO     | mean x: 1773102435.5
[2026-03-10 02:54:22] 2026-03-10 01:53:38,050 | INFO     | mean y: 2303975.2533333334
[2026-03-10 02:54:22] 2026-03-10 01:53:38,050 | INFO     | intersect: -30082354547.900566
[2026-03-10 02:54:22] 2026-03-10 01:53:38,051 | INFO     | chi2: 1.3104427567543404
[2026-03-10 02:54:22] 2026-03-10 01:53:38,051 | INFO     | current chi2=1.3104427567543404 (change=-0.07477010198689987 %)
[2026-03-10 02:54:22] 2026-03-10 01:53:38,051 | INFO     | right removable region: 149
[2026-03-10 02:54:22] 2026-03-10 01:53:38,051 | INFO     | sum of square deviations: 1154663510.0
[2026-03-10 02:54:22] 2026-03-10 01:53:38,052 | INFO     | sum of deviations: -11849189060.999998
[2026-03-10 02:54:22] 2026-03-10 01:53:38,052 | INFO     | mean x: 1773102893.0
[2026-03-10 02:54:22] 2026-03-10 01:53:38,052 | INFO     | mean y: 2319069.2387096775
[2026-03-10 02:54:22] 2026-03-10 01:53:38,052 | INFO     | intersect: 18197950282.84054
[2026-03-10 02:54:22] 2026-03-10 01:53:38,052 | INFO     | chi2: 0.8310694274926889
[2026-03-10 02:54:22] 2026-03-10 01:53:38,053 | INFO     | current chi2=0.8310694274926889 (change=60.71220205379796 %)
[2026-03-10 02:54:22] 2026-03-10 01:53:38,053 | INFO     | sum of square deviations: 1046484737.5
[2026-03-10 02:54:22] 2026-03-10 01:53:38,054 | INFO     | sum of deviations: -11359702094.5
[2026-03-10 02:54:22] 2026-03-10 01:53:38,054 | INFO     | mean x: 1773103045.5
[2026-03-10 02:54:22] 2026-03-10 01:53:38,054 | INFO     | mean y: 2318379.5
[2026-03-10 02:54:22] 2026-03-10 01:53:38,054 | INFO     | intersect: 19249538771.694855
[2026-03-10 02:54:22] 2026-03-10 01:53:38,055 | INFO     | chi2: 0.831541982227133
[2026-03-10 02:54:22] 2026-03-10 01:53:38,055 | INFO     | current chi2=0.831541982227133 (change=-0.05686104178682993 %)
[2026-03-10 02:54:22] 2026-03-10 01:53:38,055 | INFO     | left removable region: 20
[2026-03-10 02:54:22] 2026-03-10 01:53:38,055 | INFO     | sum of square deviations: 665612480.0
[2026-03-10 02:54:22] 2026-03-10 01:53:38,056 | INFO     | sum of deviations: -1777143805.0
[2026-03-10 02:54:22] 2026-03-10 01:53:38,056 | INFO     | mean x: 1773103015.0
[2026-03-10 02:54:22] 2026-03-10 01:53:38,056 | INFO     | mean y: 2333051.6666666665
[2026-03-10 02:54:22] 2026-03-10 01:53:38,056 | INFO     | intersect: 4736407507.02254
[2026-03-10 02:54:22] 2026-03-10 01:53:38,056 | INFO     | chi2: 0.000904048795266458
[2026-03-10 02:54:22] 2026-03-10 01:53:38,056 | INFO     | current memory leak: -2.67 B/s (using 129 data points, chi2=0.00)
[2026-03-10 02:54:22] 2026-03-10 01:53:38,057 | INFO     | could have reported an average CPU frequency of 2727 MHz (9 samples)
[2026-03-10 02:54:22] 2026-03-10 01:53:38,057 | INFO     | ..............................
[2026-03-10 02:54:22] 2026-03-10 01:53:38,057 | INFO     | . Timing measurements:
[2026-03-10 02:54:22] 2026-03-10 01:53:38,057 | INFO     | . get job = 0 s
[2026-03-10 02:54:22] 2026-03-10 01:53:38,057 | INFO     | . initial setup = 9 s
[2026-03-10 02:54:22] 2026-03-10 01:53:38,057 | INFO     | . payload setup = 10 s
[2026-03-10 02:54:22] 2026-03-10 01:53:38,057 | INFO     | . stage-in = 0 s
[2026-03-10 02:54:22] 2026-03-10 01:53:38,057 | INFO     | . payload execution = 9730 s
[2026-03-10 02:54:22] 2026-03-10 01:53:38,057 | INFO     | . stage-out = 0 s
[2026-03-10 02:54:22] 2026-03-10 01:53:38,058 | INFO     | . log creation = 0 s
[2026-03-10 02:54:22] 2026-03-10 01:53:38,058 | INFO     | ..............................
[2026-03-10 02:54:22] 2026-03-10 01:53:38,359 | INFO     | time since job start (9760s) is within the limit (349056.0s)
[2026-03-10 02:54:22] 2026-03-10 01:53:38,406 | INFO     | 
[2026-03-10 02:54:22] 2026-03-10 01:53:38,407 | INFO     | job summary report
[2026-03-10 02:54:22] 2026-03-10 01:53:38,407 | INFO     | --------------------------------------------------
[2026-03-10 02:54:22] 2026-03-10 01:53:38,407 | INFO     | PanDA job id: 7040789712
[2026-03-10 02:54:22] 2026-03-10 01:53:38,407 | INFO     | task id: 48955010
[2026-03-10 02:54:22] 2026-03-10 01:53:38,407 | INFO     | errors: (none)
[2026-03-10 02:54:22] 2026-03-10 01:53:38,407 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 02:54:22] 2026-03-10 01:53:38,407 | INFO     | pilot state: finished 
[2026-03-10 02:54:22] 2026-03-10 01:53:38,408 | INFO     | transexitcode: 0
[2026-03-10 02:54:22] 2026-03-10 01:53:38,408 | INFO     | exeerrorcode: 0
[2026-03-10 02:54:22] 2026-03-10 01:53:38,408 | INFO     | exeerrordiag: 
[2026-03-10 02:54:22] 2026-03-10 01:53:38,408 | INFO     | exitcode: 0
[2026-03-10 02:54:22] 2026-03-10 01:53:38,408 | INFO     | exitmsg: OK
[2026-03-10 02:54:22] 2026-03-10 01:53:38,408 | INFO     | cpuconsumptiontime: 36714 s
[2026-03-10 02:54:22] 2026-03-10 01:53:38,408 | INFO     | nevents: 400
[2026-03-10 02:54:22] 2026-03-10 01:53:38,408 | INFO     | neventsw: 0
[2026-03-10 02:54:22] 2026-03-10 01:53:38,408 | INFO     | pid: 3531802
[2026-03-10 02:54:22] 2026-03-10 01:53:38,408 | INFO     | pgrp: 3531802
[2026-03-10 02:54:22] 2026-03-10 01:53:38,409 | INFO     | corecount: 4
[2026-03-10 02:54:22] 2026-03-10 01:53:38,409 | INFO     | event service: False
[2026-03-10 02:54:22] 2026-03-10 01:53:38,409 | INFO     | sizes: {0: 2279814, 1: 2280218, 12: 2280218, 9744: 2309126, 9745: 2318146, 9746: 2318202, 9747: 2318588}
[2026-03-10 02:54:22] 2026-03-10 01:53:38,409 | INFO     | --------------------------------------------------
[2026-03-10 02:54:22] 2026-03-10 01:53:38,409 | INFO     | 
[2026-03-10 02:54:22] 2026-03-10 01:53:38,409 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot16/slots/6
[2026-03-10 02:54:22] 2026-03-10 01:53:38,440 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 02:54:22] 2026-03-10 01:53:38,441 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 02:54:22] 2026-03-10 01:53:38,441 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 02:54:22] 2026-03-10 01:53:38,441 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 02:54:22] 2026-03-10 01:53:38,441 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 02:54:22] 2026-03-10 01:53:38,441 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 02:54:22] 2026-03-10 01:53:38,441 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 02:54:22] 2026-03-10 01:53:38,441 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 02:54:22] 2026-03-10 01:53:38,442 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 02:54:22] 2026-03-10 01:53:38,442 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 02:54:22] 2026-03-10 01:53:38,442 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 02:54:22] 2026-03-10 01:53:38,442 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 02:54:22] 2026-03-10 01:53:38,442 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 02:54:22] 2026-03-10 01:53:38,442 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 02:54:22] 2026-03-10 01:53:38,442 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 02:54:22] 2026-03-10 01:53:38,442 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 02:54:22] 2026-03-10 01:53:38,442 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 02:54:22] 2026-03-10 01:53:38,442 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 02:54:22] 2026-03-10 01:53:38,442 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 02:54:22] 2026-03-10 01:53:38,443 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 02:54:22] 2026-03-10 01:53:38,443 | INFO     | job 7040789712 has completed (purged errors)
[2026-03-10 02:54:22] 2026-03-10 01:53:38,443 | INFO     | overall cleanup function is called
[2026-03-10 02:54:22] 2026-03-10 01:53:39,453 | INFO     | --- collectZombieJob: --- 10, [3531802]
[2026-03-10 02:54:22] 2026-03-10 01:53:39,453 | INFO     | zombie collector waiting for pid 3531802
[2026-03-10 02:54:22] 2026-03-10 01:53:39,453 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 02:54:22] 2026-03-10 01:53:39,454 | INFO     | collected zombie processes
[2026-03-10 02:54:22] 2026-03-10 01:53:39,454 | INFO     | will attempt to kill all subprocesses of pid=3531802
[2026-03-10 02:54:22] 2026-03-10 01:53:41,451 | INFO     | PID=3526438 has CPU usage=21.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-10 02:54:22] 2026-03-10 01:53:41,451 | INFO     | .. there are 31 such processes running
[2026-03-10 02:54:22] 2026-03-10 01:53:41,562 | INFO     | process IDs to be killed: [3531802] (in reverse order)
[2026-03-10 02:54:22] 2026-03-10 01:53:41,894 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 02:54:22] 2026-03-10 01:53:41,894 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 02:54:22] 2026-03-10 01:53:41,922 | INFO     | did not find any defunct processes belonging to 3531802
[2026-03-10 02:54:22] 2026-03-10 01:53:41,946 | INFO     | did not find any defunct processes belonging to 3531802
[2026-03-10 02:54:22] 2026-03-10 01:53:41,946 | INFO     | ready for new job
[2026-03-10 02:54:22] 2026-03-10 01:53:41,946 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 02:54:22] 2026-03-10 01:53:41,949 | INFO     | **************************************
[2026-03-10 02:54:22] 2026-03-10 01:53:41,949 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 02:54:22] 2026-03-10 01:53:41,949 | INFO     | **************************************
[2026-03-10 02:54:22] 2026-03-10 01:53:41,949 | INFO     | 
[2026-03-10 02:54:22] 2026-03-10 01:53:41,958 | INFO     | architecture information:
[2026-03-10 02:54:22] 2026-03-10 01:53:41,959 | INFO     | executing command: cat /etc/os-release
[2026-03-10 02:54:22] 2026-03-10 01:53:41,981 | INFO     | cat /etc/os-release:
[2026-03-10 02:54:22] NAME="CentOS Linux"
[2026-03-10 02:54:22] VERSION="7 (Core)"
[2026-03-10 02:54:22] ID="centos"
[2026-03-10 02:54:22] ID_LIKE="rhel fedora"
[2026-03-10 02:54:22] VERSION_ID="7"
[2026-03-10 02:54:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 02:54:22] ANSI_COLOR="0;31"
[2026-03-10 02:54:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 02:54:22] HOME_URL="https://www.centos.org/"
[2026-03-10 02:54:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 02:54:22] 
[2026-03-10 02:54:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 02:54:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 02:54:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 02:54:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 02:54:22] 
[2026-03-10 02:54:22] 2026-03-10 01:53:41,982 | INFO     | **************************************
[2026-03-10 02:54:22] 2026-03-10 01:53:42,485 | INFO     | executing command: df -mP /var/lib/boinc/var/slot16/slots/6
[2026-03-10 02:54:22] 2026-03-10 01:53:42,513 | INFO     | sufficient remaining disk space (53164900352 B)
[2026-03-10 02:54:22] 2026-03-10 01:53:42,514 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 02:54:22] 2026-03-10 01:53:42,514 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 02:54:22] 2026-03-10 01:53:42,514 | INFO     | update_server=False
[2026-03-10 02:54:22] 2026-03-10 01:53:42,514 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 02:54:22] 2026-03-10 01:53:42,514 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 02:54:22] 2026-03-10 01:53:42,907 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 02:54:22] 2026-03-10 01:53:42,916 | INFO     | all data control threads have been joined
[2026-03-10 02:54:22] 2026-03-10 01:53:42,920 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 02:54:22] 2026-03-10 01:53:42,921 | INFO     | aborting loop
[2026-03-10 02:54:22] 2026-03-10 01:53:43,043 | INFO     | all payload control threads have been joined
[2026-03-10 02:54:22] 2026-03-10 01:53:43,165 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 02:54:22] 2026-03-10 01:53:43,520 | INFO     | [job] retrieve thread has finished
[2026-03-10 02:54:22] 2026-03-10 01:53:43,568 | INFO     | [job] validate thread has finished
[2026-03-10 02:54:22] 2026-03-10 01:53:43,590 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 02:54:22] 2026-03-10 01:53:43,623 | INFO     | all job control threads have been joined
[2026-03-10 02:54:22] 2026-03-10 01:53:43,922 | INFO     | [data] control thread has finished
[2026-03-10 02:54:22] 2026-03-10 01:53:43,926 | INFO     | [job] job monitor thread has finished
[2026-03-10 02:54:22] 2026-03-10 01:53:44,049 | INFO     | [payload] control thread has finished
[2026-03-10 02:54:22] 2026-03-10 01:53:44,170 | INFO     | [job] queue monitor thread has finished
[2026-03-10 02:54:22] 2026-03-10 01:53:44,192 | INFO     | [payload] validate_post thread has finished
[2026-03-10 02:54:22] 2026-03-10 01:53:44,379 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 02:54:22] 2026-03-10 01:53:44,481 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 02:54:22] 2026-03-10 01:53:44,520 | INFO     | [data] copytool_out thread has finished
[2026-03-10 02:54:22] 2026-03-10 01:53:44,622 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 02:54:22] 2026-03-10 01:53:44,629 | INFO     | [job] control thread has finished
[2026-03-10 02:54:22] 2026-03-10 01:53:44,674 | INFO     | [payload] failed_post thread has finished
[2026-03-10 02:54:22] 2026-03-10 01:53:44,923 | INFO     | [data] copytool_in thread has finished
[2026-03-10 02:54:22] 2026-03-10 01:53:46,913 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 02:54:22] 2026-03-10 01:54:14,431 | INFO     | PID=3526438 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 02:54:22] 2026-03-10 01:54:14,432 | INFO     | .. there are 31 such processes running
[2026-03-10 02:54:22] 2026-03-10 01:54:14,432 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 02:54:22] 2026-03-10 01:54:14,432 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 02:54:22] 2026-03-10 01:54:14,432 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 02:54:22] 2026-03-10 01:54:14,849 | INFO     | [monitor] cgroup control has ended
[2026-03-10 02:54:22] 2026-03-10 01:54:16,682 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22719463229248)>', '<ExcThread(monitor, started 22719210178304)>']
[2026-03-10 02:54:22] 2026-03-10 01:54:17,446 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 02:54:22] 2026-03-10 01:54:17,447 | INFO     | [monitor] control thread has ended
[2026-03-10 02:54:22] 2026-03-10 01:54:21,706 | INFO     | all workflow threads have been joined
[2026-03-10 02:54:22] 2026-03-10 01:54:21,707 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 02:54:22] 2026-03-10 01:54:21,707 | INFO     | traces error code: 0
[2026-03-10 02:54:22] 2026-03-10 01:54:21,707 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 02:54:22] 2026-03-10 01:54:21,847 [wrapper] ==== pilot stdout END ====
[2026-03-10 02:54:22] 2026-03-10 01:54:21,851 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 02:54:22] 2026-03-10 01:54:21,856 [wrapper] pilotpid: 3526438
[2026-03-10 02:54:22] 2026-03-10 01:54:21,859 [wrapper] Pilot exit status: 0
[2026-03-10 02:54:22] 2026-03-10 01:54:21,877 [wrapper] pandaids: 7040789712
[2026-03-10 02:54:22] 2026-03-10 01:54:22,054 [wrapper] cleanup supervisor_pilot 3870778 3526439
[2026-03-10 02:54:22] 2026-03-10 01:54:22,060 [wrapper] Test setup, not cleaning
[2026-03-10 02:54:22] 2026-03-10 01:54:22,065 [wrapper] apfmon messages muted
[2026-03-10 02:54:22] 2026-03-10 01:54:22,069 [wrapper] ==== wrapper stdout END ====
[2026-03-10 02:54:22] 2026-03-10 01:54:22,073 [wrapper] ==== wrapper stderr END ====
[2026-03-10 02:54:22]  *** Error codes and diagnostics ***
[2026-03-10 02:54:22]     "exeErrorCode": 0,
[2026-03-10 02:54:22]     "exeErrorDiag": "",
[2026-03-10 02:54:22]     "pilotErrorCode": 0,
[2026-03-10 02:54:22]     "pilotErrorDiag": "",
[2026-03-10 02:54:22]  *** Listing of results directory ***
[2026-03-10 02:54:22] total 613676
[2026-03-10 02:54:22] -rw-r--r--. 1 boinc boinc    584627 Mar  9 10:23 pilot3.tar.gz
[2026-03-10 02:54:22] -rwx------. 1 boinc boinc     36322 Mar  9 10:24 runpilot2-wrapper.sh
[2026-03-10 02:54:22] -rw-r--r--. 1 boinc boinc      5111 Mar  9 10:25 queuedata.json
[2026-03-10 02:54:22] -rw-r--r--. 1 boinc boinc       100 Mar 10 00:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 02:54:22] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 00:10 run_atlas
[2026-03-10 02:54:22] -rw-r--r--. 1 boinc boinc       105 Mar 10 00:10 job.xml
[2026-03-10 02:54:22] -rw-r--r--. 1 boinc boinc      6617 Mar 10 00:10 init_data.xml
[2026-03-10 02:54:22] -rw-r--r--. 2 boinc boinc 440530108 Mar 10 00:10 EVNT.46701403._001344.pool.root.1
[2026-03-10 02:54:22] -rw-r--r--. 2 boinc boinc     15845 Mar 10 00:10 start_atlas.sh
[2026-03-10 02:54:22] drwxrwx--x. 2 boinc boinc      4096 Mar 10 00:10 shared
[2026-03-10 02:54:22] -rw-r--r--. 2 boinc boinc    597967 Mar 10 00:10 input.tar.gz
[2026-03-10 02:54:22] -rw-r--r--. 1 boinc boinc         0 Mar 10 00:10 boinc_lockfile
[2026-03-10 02:54:22] -rw-r--r--. 1 boinc boinc      2563 Mar 10 00:10 pandaJob.out
[2026-03-10 02:54:22] -rw-------. 1 boinc boinc   1002738 Mar 10 00:10 agis_schedconf.cvmfs.json
[2026-03-10 02:54:22] -rw-------. 1 boinc boinc   1511578 Mar 10 00:10 agis_ddmendpoints.agis.ALL.json
[2026-03-10 02:54:22] -rw-------. 1 boinc boinc       443 Mar 10 00:10 workernode_map.json
[2026-03-10 02:54:22] drwx------. 5 boinc boinc      4096 Mar 10 00:10 pilot3
[2026-03-10 02:54:22] -rw-------. 1 boinc boinc 180510053 Mar 10 02:52 HITS.48955010._017240.pool.root.1
[2026-03-10 02:54:22] -rw-------. 1 boinc boinc        95 Mar 10 02:53 pilot_heartbeat.json
[2026-03-10 02:54:22] -rw-------. 1 boinc boinc      1023 Mar 10 02:53 memory_monitor_summary.json
[2026-03-10 02:54:22] -rw-r--r--. 1 boinc boinc       530 Mar 10 02:53 boinc_task_state.xml
[2026-03-10 02:54:22] -rw-------. 1 boinc boinc    370164 Mar 10 02:53 log.48955010._017240.job.log.tgz.1
[2026-03-10 02:54:22] -rw-------. 1 boinc boinc      6350 Mar 10 02:53 heartbeat.json
[2026-03-10 02:54:22] -rw-r--r--. 1 boinc boinc      8192 Mar 10 02:54 boinc_mmap_file
[2026-03-10 02:54:22] -rw-r--r--. 1 boinc boinc        27 Mar 10 02:54 wrapper_checkpoint.txt
[2026-03-10 02:54:22] -rw-------. 1 boinc boinc      4829 Mar 10 02:54 pilotlog.txt
[2026-03-10 02:54:22] -rw-------. 1 boinc boinc   1346997 Mar 10 02:54 log.48955010._017240.job.log.1
[2026-03-10 02:54:22] -rw-------. 1 boinc boinc       357 Mar 10 02:54 output.list
[2026-03-10 02:54:22] -rw-r--r--. 1 boinc boinc       620 Mar 10 02:54 runtime_log
[2026-03-10 02:54:22] -rw-------. 1 boinc boinc   1730560 Mar 10 02:54 result.tar.gz
[2026-03-10 02:54:22] -rw-------. 1 boinc boinc       663 Mar 10 02:54 A84NDm11lJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmV7bLDmyIBSun.diag
[2026-03-10 02:54:22] -rw-r--r--. 1 boinc boinc      9204 Mar 10 02:54 runtime_log.err
[2026-03-10 02:54:22] -rw-r--r--. 1 boinc boinc     20929 Mar 10 02:54 stderr.txt
[2026-03-10 02:54:22] HITS file was successfully produced:
[2026-03-10 02:54:22] -rw-------. 1 boinc boinc 180510053 Mar 10 02:52 shared/HITS.pool.root.1
[2026-03-10 02:54:22]  *** Contents of shared directory: ***
[2026-03-10 02:54:22] total 608788
[2026-03-10 02:54:22] -rw-r--r--. 2 boinc boinc 440530108 Mar 10 00:10 ATLAS.root_0
[2026-03-10 02:54:22] -rw-r--r--. 2 boinc boinc     15845 Mar 10 00:10 start_atlas.sh
[2026-03-10 02:54:22] -rw-r--r--. 2 boinc boinc    597967 Mar 10 00:10 input.tar.gz
[2026-03-10 02:54:22] -rw-------. 1 boinc boinc 180510053 Mar 10 02:52 HITS.pool.root.1
[2026-03-10 02:54:22] -rw-------. 1 boinc boinc   1730560 Mar 10 02:54 result.tar.gz
02:54:23 (3522219): run_atlas exited; CPU time 37283.268362
02:54:23 (3522219): called boinc_finish(0)

</stderr_txt>
]]>

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