Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:54:33 (3879733): wrapper (7.7.26015): starting
02:54:33 (3879733): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 02:54:33] Arguments: --nthreads 4
[2026-03-10 02:54:33] Threads: 4
[2026-03-10 02:54:33] Checking for CVMFS
[2026-03-10 02:54:33] No cvmfs_config command found, will try listing directly
[2026-03-10 02:54:33] CVMFS is ok
[2026-03-10 02:54:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 02:54:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 02:54:33] Further information can be found at the LHC@home message board.
[2026-03-10 02:54:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 02:54:33] Checking for apptainer binary...
[2026-03-10 02:54:33] which: no apptainer in ((null))
[2026-03-10 02:54:33] apptainer is not installed, using version from CVMFS
[2026-03-10 02:54:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 02:54:33] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot16/slots/6/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-03-10 02:54:33] apptainer works
[2026-03-10 02:54:33] Set ATHENA_PROC_NUMBER=4
[2026-03-10 02:54:33] Set ATHENA_CORE_NUMBER=4
[2026-03-10 02:54:33] Starting ATLAS job with PandaID=7040789710
[2026-03-10 02:54:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot16/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 05:45:21]  *** The last 200 lines of the pilot log: ***
[2026-03-10 05:45:21] 2026-03-10 04:44:46,074 | INFO     | extracted standard info from prmon json
[2026-03-10 05:45:21] 2026-03-10 04:44:46,074 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 05:45:21] 2026-03-10 04:44:46,074 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 05:45:21] 2026-03-10 04:44:46,075 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 05:45:21] 2026-03-10 04:44:46,075 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 05:45:21] 2026-03-10 04:44:46,078 | INFO     | fitting pss+swap vs Time
[2026-03-10 05:45:21] 2026-03-10 04:44:46,078 | INFO     | sum of square deviations: 1444149868.0
[2026-03-10 05:45:21] 2026-03-10 04:44:46,079 | INFO     | sum of deviations: 12204443300.999989
[2026-03-10 05:45:21] 2026-03-10 04:44:46,079 | INFO     | mean x: 1773112790.0
[2026-03-10 05:45:21] 2026-03-10 04:44:46,080 | INFO     | mean y: 2291094.1976047903
[2026-03-10 05:45:21] 2026-03-10 04:44:46,080 | INFO     | intersect: -14982202545.511608
[2026-03-10 05:45:21] 2026-03-10 04:44:46,080 | INFO     | chi2: 2.215235550704434
[2026-03-10 05:45:21] 2026-03-10 04:44:46,080 | INFO     | sum of square deviations: 1318277740.5
[2026-03-10 05:45:21] 2026-03-10 04:44:46,081 | INFO     | sum of deviations: 22310411023.0
[2026-03-10 05:45:21] 2026-03-10 04:44:46,081 | INFO     | mean x: 1773112637.5
[2026-03-10 05:45:21] 2026-03-10 04:44:46,082 | INFO     | mean y: 2303022.827160494
[2026-03-10 05:45:21] 2026-03-10 04:44:46,082 | INFO     | intersect: -30005691891.580338
[2026-03-10 05:45:21] 2026-03-10 04:44:46,082 | INFO     | chi2: 1.3714246588734762
[2026-03-10 05:45:21] 2026-03-10 04:44:46,082 | INFO     | current chi2=1.3714246588734762 (change=38.09124910272544 %)
[2026-03-10 05:45:21] 2026-03-10 04:44:46,082 | INFO     | sum of square deviations: 1199940638.0
[2026-03-10 05:45:21] 2026-03-10 04:44:46,083 | INFO     | sum of deviations: 21506097719.000004
[2026-03-10 05:45:21] 2026-03-10 04:44:46,083 | INFO     | mean x: 1773112485.0
[2026-03-10 05:45:21] 2026-03-10 04:44:46,083 | INFO     | mean y: 2301986.121019108
[2026-03-10 05:45:21] 2026-03-10 04:44:46,084 | INFO     | intersect: -31776545368.150295
[2026-03-10 05:45:21] 2026-03-10 04:44:46,084 | INFO     | chi2: 1.3725181255172125
[2026-03-10 05:45:21] 2026-03-10 04:44:46,084 | INFO     | current chi2=1.3725181255172125 (change=-0.07973217024072846 %)
[2026-03-10 05:45:21] 2026-03-10 04:44:46,084 | INFO     | right removable region: 156
[2026-03-10 05:45:21] 2026-03-10 04:44:46,084 | INFO     | sum of square deviations: 1318277740.5
[2026-03-10 05:45:21] 2026-03-10 04:44:46,085 | INFO     | sum of deviations: -9640683878.0
[2026-03-10 05:45:21] 2026-03-10 04:44:46,085 | INFO     | mean x: 1773112942.5
[2026-03-10 05:45:21] 2026-03-10 04:44:46,086 | INFO     | mean y: 2317168.888888889
[2026-03-10 05:45:21] 2026-03-10 04:44:46,086 | INFO     | intersect: 12969251854.556437
[2026-03-10 05:45:21] 2026-03-10 04:44:46,086 | INFO     | chi2: 0.8732814909464527
[2026-03-10 05:45:21] 2026-03-10 04:44:46,086 | INFO     | current chi2=0.8732814909464527 (change=60.57839128354754 %)
[2026-03-10 05:45:21] 2026-03-10 04:44:46,086 | INFO     | sum of square deviations: 1199940638.0
[2026-03-10 05:45:21] 2026-03-10 04:44:46,087 | INFO     | sum of deviations: -9014879204.999998
[2026-03-10 05:45:21] 2026-03-10 04:44:46,087 | INFO     | mean x: 1773113095.0
[2026-03-10 05:45:21] 2026-03-10 04:44:46,087 | INFO     | mean y: 2316356.2101910827
[2026-03-10 05:45:21] 2026-03-10 04:44:46,088 | INFO     | intersect: 13323308963.703402
[2026-03-10 05:45:21] 2026-03-10 04:44:46,088 | INFO     | chi2: 0.8735310319399202
[2026-03-10 05:45:21] 2026-03-10 04:44:46,088 | INFO     | current chi2=0.8735310319399202 (change=-0.028575092459256553 %)
[2026-03-10 05:45:21] 2026-03-10 04:44:46,088 | INFO     | left removable region: 20
[2026-03-10 05:45:21] 2026-03-10 04:44:46,088 | INFO     | sum of square deviations: 779958810.0
[2026-03-10 05:45:21] 2026-03-10 04:44:46,089 | INFO     | sum of deviations: 2131821808.5000002
[2026-03-10 05:45:21] 2026-03-10 04:44:46,089 | INFO     | mean x: 1773113064.5
[2026-03-10 05:45:21] 2026-03-10 04:44:46,089 | INFO     | mean y: 2327737.404411765
[2026-03-10 05:45:21] 2026-03-10 04:44:46,089 | INFO     | intersect: -4844032161.828431
[2026-03-10 05:45:21] 2026-03-10 04:44:46,090 | INFO     | chi2: 0.0001866506494789922
[2026-03-10 05:45:21] 2026-03-10 04:44:46,090 | INFO     | current memory leak: 2.73 B/s (using 136 data points, chi2=0.00)
[2026-03-10 05:45:21] 2026-03-10 04:44:46,090 | INFO     | could have reported an average CPU frequency of 2728 MHz (9 samples)
[2026-03-10 05:45:21] 2026-03-10 04:44:46,090 | INFO     | ..............................
[2026-03-10 05:45:21] 2026-03-10 04:44:46,090 | INFO     | . Timing measurements:
[2026-03-10 05:45:21] 2026-03-10 04:44:46,091 | INFO     | . get job = 0 s
[2026-03-10 05:45:21] 2026-03-10 04:44:46,091 | INFO     | . initial setup = 8 s
[2026-03-10 05:45:21] 2026-03-10 04:44:46,091 | INFO     | . payload setup = 9 s
[2026-03-10 05:45:21] 2026-03-10 04:44:46,091 | INFO     | . stage-in = 0 s
[2026-03-10 05:45:21] 2026-03-10 04:44:46,091 | INFO     | . payload execution = 10159 s
[2026-03-10 05:45:21] 2026-03-10 04:44:46,091 | INFO     | . stage-out = 0 s
[2026-03-10 05:45:21] 2026-03-10 04:44:46,091 | INFO     | . log creation = 0 s
[2026-03-10 05:45:21] 2026-03-10 04:44:46,091 | INFO     | ..............................
[2026-03-10 05:45:21] 2026-03-10 04:44:46,188 | INFO     | 
[2026-03-10 05:45:21] 2026-03-10 04:44:46,189 | INFO     | job summary report
[2026-03-10 05:45:21] 2026-03-10 04:44:46,189 | INFO     | --------------------------------------------------
[2026-03-10 05:45:21] 2026-03-10 04:44:46,189 | INFO     | PanDA job id: 7040789710
[2026-03-10 05:45:21] 2026-03-10 04:44:46,189 | INFO     | task id: 48955010
[2026-03-10 05:45:21] 2026-03-10 04:44:46,189 | INFO     | errors: (none)
[2026-03-10 05:45:21] 2026-03-10 04:44:46,189 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 05:45:21] 2026-03-10 04:44:46,189 | INFO     | pilot state: finished 
[2026-03-10 05:45:21] 2026-03-10 04:44:46,189 | INFO     | transexitcode: 0
[2026-03-10 05:45:21] 2026-03-10 04:44:46,190 | INFO     | exeerrorcode: 0
[2026-03-10 05:45:21] 2026-03-10 04:44:46,190 | INFO     | exeerrordiag: 
[2026-03-10 05:45:21] 2026-03-10 04:44:46,190 | INFO     | exitcode: 0
[2026-03-10 05:45:21] 2026-03-10 04:44:46,190 | INFO     | exitmsg: OK
[2026-03-10 05:45:21] 2026-03-10 04:44:46,190 | INFO     | cpuconsumptiontime: 38685 s
[2026-03-10 05:45:21] 2026-03-10 04:44:46,190 | INFO     | nevents: 400
[2026-03-10 05:45:21] 2026-03-10 04:44:46,190 | INFO     | neventsw: 0
[2026-03-10 05:45:21] 2026-03-10 04:44:46,190 | INFO     | pid: 3889794
[2026-03-10 05:45:21] 2026-03-10 04:44:46,190 | INFO     | pgrp: 3889794
[2026-03-10 05:45:21] 2026-03-10 04:44:46,190 | INFO     | corecount: 4
[2026-03-10 05:45:21] 2026-03-10 04:44:46,190 | INFO     | event service: False
[2026-03-10 05:45:21] 2026-03-10 04:44:46,190 | INFO     | sizes: {0: 2279089, 1: 2280218, 12: 2280218, 10172: 2309311, 10173: 2309310, 10174: 2318570, 10176: 2318772}
[2026-03-10 05:45:21] 2026-03-10 04:44:46,191 | INFO     | --------------------------------------------------
[2026-03-10 05:45:21] 2026-03-10 04:44:46,191 | INFO     | 
[2026-03-10 05:45:21] 2026-03-10 04:44:46,191 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot16/slots/6
[2026-03-10 05:45:21] 2026-03-10 04:44:46,236 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 05:45:21] 2026-03-10 04:44:46,237 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 05:45:21] 2026-03-10 04:44:46,237 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 05:45:21] 2026-03-10 04:44:46,237 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 05:45:21] 2026-03-10 04:44:46,237 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 05:45:21] 2026-03-10 04:44:46,237 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 05:45:21] 2026-03-10 04:44:46,237 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 05:45:21] 2026-03-10 04:44:46,237 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 05:45:21] 2026-03-10 04:44:46,237 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 05:45:21] 2026-03-10 04:44:46,237 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 05:45:21] 2026-03-10 04:44:46,238 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 05:45:21] 2026-03-10 04:44:46,238 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 05:45:21] 2026-03-10 04:44:46,238 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 05:45:21] 2026-03-10 04:44:46,238 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 05:45:21] 2026-03-10 04:44:46,238 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 05:45:21] 2026-03-10 04:44:46,238 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 05:45:21] 2026-03-10 04:44:46,238 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 05:45:21] 2026-03-10 04:44:46,238 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 05:45:21] 2026-03-10 04:44:46,238 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 05:45:21] 2026-03-10 04:44:46,238 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 05:45:21] 2026-03-10 04:44:46,239 | INFO     | job 7040789710 has completed (purged errors)
[2026-03-10 05:45:21] 2026-03-10 04:44:46,239 | INFO     | overall cleanup function is called
[2026-03-10 05:45:21] 2026-03-10 04:44:47,255 | WARNING  | process 3889794 can no longer be monitored (due to stat problems) - aborting
[2026-03-10 05:45:21] 2026-03-10 04:44:47,266 | INFO     | --- collectZombieJob: --- 10, [3889794]
[2026-03-10 05:45:21] 2026-03-10 04:44:47,267 | INFO     | zombie collector waiting for pid 3889794
[2026-03-10 05:45:21] 2026-03-10 04:44:47,267 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 05:45:21] 2026-03-10 04:44:47,267 | INFO     | collected zombie processes
[2026-03-10 05:45:21] 2026-03-10 04:44:47,267 | INFO     | will attempt to kill all subprocesses of pid=3889794
[2026-03-10 05:45:21] 2026-03-10 04:44:48,507 | INFO     | using path: /var/lib/boinc/var/slot16/slots/6/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 05:45:21] 2026-03-10 04:44:49,279 | INFO     | process IDs to be killed: [3889794] (in reverse order)
[2026-03-10 05:45:21] 2026-03-10 04:44:49,756 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 05:45:21] 2026-03-10 04:44:49,756 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 05:45:21] 2026-03-10 04:44:49,811 | INFO     | did not find any defunct processes belonging to 3889794
[2026-03-10 05:45:21] 2026-03-10 04:44:49,905 | INFO     | did not find any defunct processes belonging to 3889794
[2026-03-10 05:45:21] 2026-03-10 04:44:49,905 | INFO     | ready for new job
[2026-03-10 05:45:21] 2026-03-10 04:44:49,905 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 05:45:21] 2026-03-10 04:44:49,908 | INFO     | **************************************
[2026-03-10 05:45:21] 2026-03-10 04:44:49,908 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 05:45:21] 2026-03-10 04:44:49,908 | INFO     | **************************************
[2026-03-10 05:45:21] 2026-03-10 04:44:49,908 | INFO     | 
[2026-03-10 05:45:21] 2026-03-10 04:44:49,928 | INFO     | architecture information:
[2026-03-10 05:45:21] 2026-03-10 04:44:49,929 | INFO     | executing command: cat /etc/os-release
[2026-03-10 05:45:21] 2026-03-10 04:44:49,954 | INFO     | number of running child processes to parent process 3889794: 1
[2026-03-10 05:45:21] 2026-03-10 04:44:49,955 | INFO     | maximum number of monitored processes: 6
[2026-03-10 05:45:21] 2026-03-10 04:44:49,955 | INFO     | aborting job monitoring since job object (job id=7040789710) has expired
[2026-03-10 05:45:21] 2026-03-10 04:44:49,955 | INFO     | cat /etc/os-release:
[2026-03-10 05:45:21] NAME="CentOS Linux"
[2026-03-10 05:45:21] VERSION="7 (Core)"
[2026-03-10 05:45:21] ID="centos"
[2026-03-10 05:45:21] ID_LIKE="rhel fedora"
[2026-03-10 05:45:21] VERSION_ID="7"
[2026-03-10 05:45:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 05:45:21] ANSI_COLOR="0;31"
[2026-03-10 05:45:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 05:45:21] HOME_URL="https://www.centos.org/"
[2026-03-10 05:45:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 05:45:21] 
[2026-03-10 05:45:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 05:45:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 05:45:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 05:45:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 05:45:21] 
[2026-03-10 05:45:21] 2026-03-10 04:44:49,956 | INFO     | **************************************
[2026-03-10 05:45:21] 2026-03-10 04:44:50,459 | INFO     | executing command: df -mP /var/lib/boinc/var/slot16/slots/6
[2026-03-10 05:45:21] 2026-03-10 04:44:50,498 | INFO     | sufficient remaining disk space (52015661056 B)
[2026-03-10 05:45:21] 2026-03-10 04:44:50,498 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 05:45:21] 2026-03-10 04:44:50,499 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 05:45:21] 2026-03-10 04:44:50,499 | INFO     | update_server=False
[2026-03-10 05:45:21] 2026-03-10 04:44:50,499 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 05:45:21] 2026-03-10 04:44:50,499 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 05:45:21] 2026-03-10 04:44:50,500 | INFO     | will abort loop
[2026-03-10 05:45:21] 2026-03-10 04:44:50,500 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 05:45:21] 2026-03-10 04:44:50,538 | INFO     | all payload control threads have been joined
[2026-03-10 05:45:21] 2026-03-10 04:44:50,773 | INFO     | all data control threads have been joined
[2026-03-10 05:45:21] 2026-03-10 04:44:51,109 | INFO     | all job control threads have been joined
[2026-03-10 05:45:21] 2026-03-10 04:44:51,206 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 05:45:21] 2026-03-10 04:44:51,504 | INFO     | [job] retrieve thread has finished
[2026-03-10 05:45:21] 2026-03-10 04:44:51,505 | INFO     | [job] job monitor thread has finished
[2026-03-10 05:45:21] 2026-03-10 04:44:51,544 | INFO     | [payload] control thread has finished
[2026-03-10 05:45:21] 2026-03-10 04:44:51,565 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 05:45:21] 2026-03-10 04:44:51,566 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 05:45:21] 2026-03-10 04:44:51,617 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 05:45:21] 2026-03-10 04:44:51,739 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 05:45:21] 2026-03-10 04:44:51,744 | INFO     | [payload] validate_post thread has finished
[2026-03-10 05:45:21] 2026-03-10 04:44:51,779 | INFO     | [data] control thread has finished
[2026-03-10 05:45:21] 2026-03-10 04:44:52,014 | INFO     | [payload] failed_post thread has finished
[2026-03-10 05:45:21] 2026-03-10 04:44:52,066 | INFO     | [data] copytool_in thread has finished
[2026-03-10 05:45:21] 2026-03-10 04:44:52,114 | INFO     | [job] control thread has finished
[2026-03-10 05:45:21] 2026-03-10 04:44:52,212 | INFO     | [job] queue monitor thread has finished
[2026-03-10 05:45:21] 2026-03-10 04:44:52,623 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 05:45:21] 2026-03-10 04:44:52,623 | INFO     | [job] validate thread has finished
[2026-03-10 05:45:21] 2026-03-10 04:44:53,744 | INFO     | [data] copytool_out thread has finished
[2026-03-10 05:45:21] 2026-03-10 04:44:54,505 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 05:45:21] 2026-03-10 04:45:15,119 | INFO     | [monitor] cgroup control has ended
[2026-03-10 05:45:21] 2026-03-10 04:45:16,024 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23407804823360)>', '<ExcThread(monitor, started 23407489943296)>']
[2026-03-10 05:45:21] 2026-03-10 04:45:18,589 | INFO     | PID=3884074 has CPU usage=14.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-10 05:45:21] 2026-03-10 04:45:18,589 | INFO     | .. there are 30 such processes running
[2026-03-10 05:45:21] 2026-03-10 04:45:18,589 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 05:45:21] 2026-03-10 04:45:18,589 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 05:45:21] 2026-03-10 04:45:18,590 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 05:45:21] 2026-03-10 04:45:18,590 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 05:45:21] 2026-03-10 04:45:18,590 | INFO     | [monitor] control thread has ended
[2026-03-10 05:45:21] 2026-03-10 04:45:21,048 | INFO     | all workflow threads have been joined
[2026-03-10 05:45:21] 2026-03-10 04:45:21,049 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 05:45:21] 2026-03-10 04:45:21,049 | INFO     | traces error code: 0
[2026-03-10 05:45:21] 2026-03-10 04:45:21,049 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 05:45:21] 2026-03-10 04:45:21,211 [wrapper] ==== pilot stdout END ====
[2026-03-10 05:45:21] 2026-03-10 04:45:21,217 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 05:45:21] 2026-03-10 04:45:21,221 [wrapper] pilotpid: 3884074
[2026-03-10 05:45:21] 2026-03-10 04:45:21,224 [wrapper] Pilot exit status: 0
[2026-03-10 05:45:21] 2026-03-10 04:45:21,276 [wrapper] pandaids: 7040789710
[2026-03-10 05:45:21] 2026-03-10 04:45:21,469 [wrapper] cleanup supervisor_pilot  109973 3884075
[2026-03-10 05:45:21] 2026-03-10 04:45:21,474 [wrapper] Test setup, not cleaning
[2026-03-10 05:45:21] 2026-03-10 04:45:21,478 [wrapper] apfmon messages muted
[2026-03-10 05:45:21] 2026-03-10 04:45:21,483 [wrapper] ==== wrapper stdout END ====
[2026-03-10 05:45:21] 2026-03-10 04:45:21,487 [wrapper] ==== wrapper stderr END ====
[2026-03-10 05:45:21]  *** Error codes and diagnostics ***
[2026-03-10 05:45:21]     "exeErrorCode": 0,
[2026-03-10 05:45:21]     "exeErrorDiag": "",
[2026-03-10 05:45:21]     "pilotErrorCode": 0,
[2026-03-10 05:45:21]     "pilotErrorDiag": "",
[2026-03-10 05:45:21]  *** Listing of results directory ***
[2026-03-10 05:45:21] total 617708
[2026-03-10 05:45:21] -rw-r--r--. 1 boinc boinc    584627 Mar  9 10:23 pilot3.tar.gz
[2026-03-10 05:45:21] -rwx------. 1 boinc boinc     36322 Mar  9 10:24 runpilot2-wrapper.sh
[2026-03-10 05:45:21] -rw-r--r--. 1 boinc boinc      5111 Mar  9 10:25 queuedata.json
[2026-03-10 05:45:21] -rw-r--r--. 1 boinc boinc       100 Mar 10 02:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 05:45:21] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 02:54 run_atlas
[2026-03-10 05:45:21] -rw-r--r--. 1 boinc boinc       105 Mar 10 02:54 job.xml
[2026-03-10 05:45:21] -rw-r--r--. 2 boinc boinc 440530108 Mar 10 02:54 EVNT.46701403._001344.pool.root.1
[2026-03-10 05:45:21] -rw-r--r--. 1 boinc boinc      6617 Mar 10 02:54 init_data.xml
[2026-03-10 05:45:21] -rw-r--r--. 2 boinc boinc     15845 Mar 10 02:54 start_atlas.sh
[2026-03-10 05:45:21] drwxrwx--x. 2 boinc boinc      4096 Mar 10 02:54 shared
[2026-03-10 05:45:21] -rw-r--r--. 2 boinc boinc    597962 Mar 10 02:54 input.tar.gz
[2026-03-10 05:45:21] -rw-r--r--. 1 boinc boinc         0 Mar 10 02:54 boinc_lockfile
[2026-03-10 05:45:21] -rw-r--r--. 1 boinc boinc      2563 Mar 10 02:54 pandaJob.out
[2026-03-10 05:45:21] -rw-------. 1 boinc boinc   1002338 Mar 10 02:54 agis_schedconf.cvmfs.json
[2026-03-10 05:45:21] -rw-------. 1 boinc boinc   1511578 Mar 10 02:54 agis_ddmendpoints.agis.ALL.json
[2026-03-10 05:45:21] -rw-------. 1 boinc boinc       443 Mar 10 02:54 workernode_map.json
[2026-03-10 05:45:21] drwx------. 5 boinc boinc      4096 Mar 10 02:54 pilot3
[2026-03-10 05:45:21] -rw-------. 1 boinc boinc 184501168 Mar 10 05:44 HITS.48955010._017238.pool.root.1
[2026-03-10 05:45:21] -rw-r--r--. 1 boinc boinc       531 Mar 10 05:44 boinc_task_state.xml
[2026-03-10 05:45:21] -rw-------. 1 boinc boinc      1027 Mar 10 05:44 memory_monitor_summary.json
[2026-03-10 05:45:21] -rw-------. 1 boinc boinc    374269 Mar 10 05:44 log.48955010._017238.job.log.tgz.1
[2026-03-10 05:45:21] -rw-------. 1 boinc boinc        95 Mar 10 05:44 pilot_heartbeat.json
[2026-03-10 05:45:21] -rw-------. 1 boinc boinc      6350 Mar 10 05:44 heartbeat.json
[2026-03-10 05:45:21] -rw-r--r--. 1 boinc boinc      8192 Mar 10 05:44 boinc_mmap_file
[2026-03-10 05:45:21] -rw-r--r--. 1 boinc boinc        28 Mar 10 05:44 wrapper_checkpoint.txt
[2026-03-10 05:45:21] -rw-------. 1 boinc boinc      5120 Mar 10 05:45 pilotlog.txt
[2026-03-10 05:45:21] -rw-------. 1 boinc boinc   1406183 Mar 10 05:45 log.48955010._017238.job.log.1
[2026-03-10 05:45:21] -rw-------. 1 boinc boinc       357 Mar 10 05:45 output.list
[2026-03-10 05:45:21] -rw-r--r--. 1 boinc boinc       620 Mar 10 05:45 runtime_log
[2026-03-10 05:45:21] -rw-------. 1 boinc boinc   1802240 Mar 10 05:45 result.tar.gz
[2026-03-10 05:45:21] -rw-r--r--. 1 boinc boinc      9205 Mar 10 05:45 runtime_log.err
[2026-03-10 05:45:21] -rw-------. 1 boinc boinc       666 Mar 10 05:45 Kt3NDm11lJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmU7bLDmdnwM8n.diag
[2026-03-10 05:45:21] -rw-r--r--. 1 boinc boinc     20876 Mar 10 05:45 stderr.txt
[2026-03-10 05:45:21] HITS file was successfully produced:
[2026-03-10 05:45:21] -rw-------. 1 boinc boinc 184501168 Mar 10 05:44 shared/HITS.pool.root.1
[2026-03-10 05:45:21]  *** Contents of shared directory: ***
[2026-03-10 05:45:21] total 612756
[2026-03-10 05:45:21] -rw-r--r--. 2 boinc boinc 440530108 Mar 10 02:54 ATLAS.root_0
[2026-03-10 05:45:21] -rw-r--r--. 2 boinc boinc     15845 Mar 10 02:54 start_atlas.sh
[2026-03-10 05:45:21] -rw-r--r--. 2 boinc boinc    597962 Mar 10 02:54 input.tar.gz
[2026-03-10 05:45:21] -rw-------. 1 boinc boinc 184501168 Mar 10 05:44 HITS.pool.root.1
[2026-03-10 05:45:21] -rw-------. 1 boinc boinc   1802240 Mar 10 05:45 result.tar.gz
05:45:22 (3879733): run_atlas exited; CPU time 39252.268036
05:45:22 (3879733): called boinc_finish(0)

</stderr_txt>
]]>

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