Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-10 11:55:59 (14036): vboxwrapper version 26210
2026-03-10 11:55:59 (14036): BOINC client version: 8.0.2
2026-03-10 11:56:00 (14036): Detected: VirtualBox VboxManage Interface (Version: 6.1.18)
2026-03-10 11:56:01 (14036): Successfully copied 'init_data.xml' to the shared directory.
2026-03-10 11:56:01 (14036): Create VM. (boinc_edfe6bef95740331, slot#0)
2026-03-10 11:56:02 (14036): Setting Memory Size for VM. (5900MB)
2026-03-10 11:56:02 (14036): Setting CPU Count for VM. (2)
2026-03-10 11:56:02 (14036): Setting Chipset Options for VM.
2026-03-10 11:56:02 (14036): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-10 11:56:03 (14036): Setting Boot Options for VM.
2026-03-10 11:56:03 (14036): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-10 11:56:04 (14036): Enabling VM Network Access.
2026-03-10 11:56:04 (14036): Disabling USB Support for VM.
2026-03-10 11:56:04 (14036): Disabling COM Port Support for VM.
2026-03-10 11:56:05 (14036): Disabling LPT Port Support for VM.
2026-03-10 11:56:05 (14036): Disabling Audio Support for VM.
2026-03-10 11:56:05 (14036): Disabling Clipboard Support for VM.
2026-03-10 11:56:05 (14036): Disabling Drag and Drop Support for VM.
2026-03-10 11:56:06 (14036): Adding storage controller(s) to VM.
2026-03-10 11:56:06 (14036): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-10 11:56:07 (14036): Adding VirtualBox Guest Additions to VM.
2026-03-10 11:56:08 (14036): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-10 11:56:08 (14036): forwarding host port 50225 to guest port 80
2026-03-10 11:56:08 (14036): Enabling remote desktop for VM.
2026-03-10 11:56:09 (14036): Enabling shared directory for VM.
2026-03-10 11:56:09 (14036): Starting VM using VBoxManage interface. (boinc_edfe6bef95740331, slot#0)
2026-03-10 11:56:17 (14036): Successfully started VM. (PID = '1472')
2026-03-10 11:56:17 (14036): Reporting VM Process ID to BOINC.
2026-03-10 11:56:17 (14036): Guest Log: BIOS: VirtualBox 6.1.18
2026-03-10 11:56:17 (14036): Guest Log: CPUID EDX: 0x178bfbff
2026-03-10 11:56:17 (14036): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-10 11:56:17 (14036): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-10 11:56:17 (14036): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-10 11:56:17 (14036): Detected: Web Application Enabled (http://localhost:50225)
2026-03-10 11:56:17 (14036): Detected: Remote Desktop Enabled (localhost:50226)
2026-03-10 11:56:17 (14036): Preference change detected
2026-03-10 11:56:17 (14036): Setting CPU throttle for VM. (100%)
2026-03-10 11:56:17 (14036): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-10 11:56:19 (14036): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-10 11:56:19 (14036): Guest Log: BIOS: Booting from Hard Disk...
2026-03-10 11:56:22 (14036): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-10 11:56:22 (14036): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-10 11:56:22 (14036): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-10 11:56:22 (14036): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-10 11:56:22 (14036): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-10 11:56:22 (14036): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-10 11:56:22 (14036): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-10 11:56:22 (14036): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-10 11:56:22 (14036): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-10 11:56:22 (14036): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-10 11:56:22 (14036): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-10 11:56:22 (14036): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-10 11:56:22 (14036): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-10 11:56:22 (14036): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-10 11:56:22 (14036): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-10 11:56:22 (14036): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-10 11:56:22 (14036): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-10 11:56:22 (14036): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-10 11:56:22 (14036): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-10 11:56:22 (14036): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-10 11:56:22 (14036): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-10 11:56:22 (14036): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-10 11:56:22 (14036): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-10 11:56:22 (14036): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-10 11:56:22 (14036): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-10 11:56:22 (14036): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-10 11:56:22 (14036): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-10 11:56:22 (14036): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-10 11:56:22 (14036): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-10 11:56:22 (14036): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-10 11:56:22 (14036): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-10 11:56:22 (14036): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-10 11:56:29 (14036): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-10 11:56:29 (14036): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-03-10 11:56:41 (14036): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-10 11:56:41 (14036): Guest Log: 00:00:00.000194 main     Log opened 2026-03-10T11:56:40.115134000Z
2026-03-10 11:56:41 (14036): Guest Log: 00:00:00.000325 main     OS Product: Linux
2026-03-10 11:56:41 (14036): Guest Log: 00:00:00.000373 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-10 11:56:41 (14036): Guest Log: 00:00:00.000412 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-10 11:56:41 (14036): Guest Log: 00:00:00.000450 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-10 11:56:41 (14036): Guest Log: 00:00:00.000451 main     Process ID: 1324
2026-03-10 11:56:41 (14036): Guest Log: 00:00:00.000452 main     Package type: LINUX_64BITS_GENERIC
2026-03-10 11:56:41 (14036): Guest Log: 00:00:00.004411 main     5.2.32 r132073 started. Verbose level = 0
2026-03-10 11:56:41 (14036): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-10 11:56:41 (14036): Guest Log: [INFO] Mounting shared directory
2026-03-10 11:56:41 (14036): Guest Log: [INFO] Checking for init_data.xml
2026-03-10 11:56:45 (14036): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-10 11:56:45 (14036): Guest Log: [INFO] Detected branch: prod
2026-03-10 11:56:45 (14036): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-10 11:56:45 (14036): Guest Log: Copying input files
2026-03-10 11:56:50 (14036): Guest Log: Copied input files into RunAtlas.
2026-03-10 11:56:50 (14036): Guest Log: Detected user-configured HTTP proxy at http://192.168.0.39:3128 - will set in /etc/cvmfs/default.local
2026-03-10 11:56:51 (14036): Guest Log: 00:00:10.010249 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 846 192 000ns (GuestNow=1 773 140 211 278 440 000 ns GuestLast=1 773 143 800 124 632 000 ns fSetTimeLastLoop=true )
2026-03-10 11:57:34 (14036): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-10 11:57:34 (14036): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-10 11:57:34 (14036): Guest Log: 2.6.3.0 1600 0 29508 157111 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.39:3128 1
2026-03-10 11:57:35 (14036): Guest Log: copied the webapp to /var/www
2026-03-10 11:57:35 (14036): Guest Log: ATHENA_PROC_NUMBER=2
2026-03-10 11:57:35 (14036): Guest Log: ATHENA_CORE_NUMBER=2
2026-03-10 11:57:35 (14036): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-10 11:57:35 (14036): Guest Log:  *** Starting ATLAS job. (PandaID=7040789560 taskID=48955010) ***
2026-03-10 13:36:24 (14036): Status Report: Elapsed Time: '6000.000000'
2026-03-10 13:36:24 (14036): Status Report: CPU Time: '11385.343750'
2026-03-10 15:16:33 (14036): Status Report: Elapsed Time: '12000.000000'
2026-03-10 15:16:33 (14036): Status Report: CPU Time: '23326.281250'
2026-03-10 15:27:13 (14036): VM state change detected. (old = 'running', new = 'paused')
2026-03-10 15:27:33 (14036): VM state change detected. (old = 'paused', new = 'running')
2026-03-10 15:28:23 (14036): VM state change detected. (old = 'running', new = 'paused')
2026-03-10 15:28:43 (14036): VM state change detected. (old = 'paused', new = 'running')
2026-03-10 15:29:33 (14036): VM state change detected. (old = 'running', new = 'paused')
2026-03-10 15:29:53 (14036): VM state change detected. (old = 'paused', new = 'running')
2026-03-10 16:42:09 (14036): VM state change detected. (old = 'running', new = 'paused')
2026-03-10 16:42:28 (14036): VM state change detected. (old = 'paused', new = 'running')
2026-03-10 16:58:12 (14036): Status Report: Elapsed Time: '18000.000000'
2026-03-10 16:58:12 (14036): Status Report: CPU Time: '35277.812500'
2026-03-10 17:15:10 (14036): VM state change detected. (old = 'running', new = 'paused')
2026-03-10 17:15:30 (14036): VM state change detected. (old = 'paused', new = 'running')
2026-03-10 17:30:11 (14036): VM state change detected. (old = 'running', new = 'paused')
2026-03-10 17:30:31 (14036): VM state change detected. (old = 'paused', new = 'running')
2026-03-10 17:34:22 (14036): VM state change detected. (old = 'running', new = 'paused')
2026-03-10 17:34:42 (14036): VM state change detected. (old = 'paused', new = 'running')
2026-03-10 18:39:23 (14036): Status Report: Elapsed Time: '24000.000000'
2026-03-10 18:39:23 (14036): Status Report: CPU Time: '47214.687500'
2026-03-10 20:19:30 (14036): Status Report: Elapsed Time: '30000.000000'
2026-03-10 20:19:30 (14036): Status Report: CPU Time: '59152.843750'
2026-03-10 21:18:03 (14036): Guest Log:  *** Job finished ***
2026-03-10 21:18:03 (14036): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-10 21:18:03 (14036): Guest Log: 2026-03-10 20:15:36,227 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-10 21:18:03 (14036): Guest Log: 2026-03-10 20:15:36,227 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-10 21:18:03 (14036): Guest Log: 2026-03-10 20:15:48,752 | INFO     | [monitor] cgroup control has ended
2026-03-10 21:18:03 (14036): Guest Log: 2026-03-10 20:15:49,869 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139830354446144)>', '<ExcThread(monitor, started 139829664786176)>']
2026-03-10 21:18:03 (14036): Guest Log: 2026-03-10 20:15:50,252 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-10 21:18:03 (14036): Guest Log: 2026-03-10 20:15:50,253 | INFO     | [monitor] control thread has ended
2026-03-10 21:18:03 (14036): Guest Log: 2026-03-10 20:15:54,875 | INFO     | all workflow threads have been joined
2026-03-10 21:18:03 (14036): Guest Log: 2026-03-10 20:15:54,875 | INFO     | end of generic workflow (traces error code: 0)
2026-03-10 21:18:03 (14036): Guest Log: 2026-03-10 20:15:54,875 | INFO     | traces error code: 0
2026-03-10 21:18:03 (14036): Guest Log: 2026-03-10 20:15:54,875 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-10 21:18:03 (14036): Guest Log: 2026-03-10 20:15:54,984 [wrapper] ==== pilot stdout END ====
2026-03-10 21:18:03 (14036): Guest Log: 2026-03-10 20:15:54,988 [wrapper] ==== wrapper stdout RESUME ====
2026-03-10 21:18:03 (14036): Guest Log: 2026-03-10 20:15:54,993 [wrapper] pilotpid: 5991
2026-03-10 21:18:03 (14036): Guest Log: 2026-03-10 20:15:55,000 [wrapper] Pilot exit status: 0
2026-03-10 21:18:03 (14036): Guest Log: 2026-03-10 20:15:55,034 [wrapper] pandaids: 7040789560
2026-03-10 21:18:03 (14036): Guest Log: 2026-03-10 20:15:55,071 [wrapper] cleanup supervisor_pilot  1580 5992
2026-03-10 21:18:03 (14036): Guest Log: 2026-03-10 20:15:55,077 [wrapper] Test setup, not cleaning
2026-03-10 21:18:03 (14036): Guest Log: 2026-03-10 20:15:55,083 [wrapper] apfmon messages muted
2026-03-10 21:18:03 (14036): Guest Log: 2026-03-10 20:15:55,089 [wrapper] ==== wrapper stdout END ====
2026-03-10 21:18:03 (14036): Guest Log: 2026-03-10 20:15:55,095 [wrapper] ==== wrapper stderr END ====
2026-03-10 21:18:03 (14036): Guest Log:  *** Error codes and diagnostics ***
2026-03-10 21:18:03 (14036): Guest Log:     "exeErrorCode": 0,
2026-03-10 21:18:03 (14036): Guest Log:     "exeErrorDiag": "",
2026-03-10 21:18:03 (14036): Guest Log:     "pilotErrorCode": 0,
2026-03-10 21:18:03 (14036): Guest Log:     "pilotErrorDiag": "",
2026-03-10 21:18:03 (14036): Guest Log:  *** Listing of results directory ***
2026-03-10 21:18:03 (14036): Guest Log: total 197988
2026-03-10 21:18:03 (14036): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  9 09:23 queuedata.json
2026-03-10 21:18:03 (14036): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  9 09:23 pilot3.tar.gz
2026-03-10 21:18:03 (14036): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  9 09:23 runpilot2-wrapper.sh
2026-03-10 21:18:03 (14036): Guest Log: -rwxr-xr-x. 1 atlas atlas      9106 Mar 10 10:56 init_data.xml
2026-03-10 21:18:03 (14036): Guest Log: -rwxr-xr-x. 1 atlas atlas    597951 Mar 10 10:56 input.tar.gz
2026-03-10 21:18:03 (14036): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar 10 10:56 start_atlas.sh
2026-03-10 21:18:03 (14036): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 10 10:56 EVNT.46701403._001341.pool.root.1 -> /data/./ATLAS.root_0
2026-03-10 21:18:03 (14036): Guest Log: -rw-r--r--. 1 atlas atlas      2563 Mar 10 10:57 pandaJob.out
2026-03-10 21:18:03 (14036): Guest Log: -rw-------. 1 atlas atlas        49 Mar 10 10:57 setup.sh.local
2026-03-10 21:18:03 (14036): Guest Log: -rw-------. 1 atlas atlas   1005414 Mar 10 10:58 agis_schedconf.cvmfs.json
2026-03-10 21:18:03 (14036): Guest Log: -rw-------. 1 atlas atlas       427 Mar 10 10:58 workernode_map.json
2026-03-10 21:18:03 (14036): Guest Log: drwx------. 5 atlas atlas      4096 Mar 10 10:58 pilot3
2026-03-10 21:18:03 (14036): Guest Log: -rw-------. 1 atlas atlas 188341554 Mar 10 20:14 HITS.48955010._017088.pool.root.1
2026-03-10 21:18:03 (14036): Guest Log: -rw-------. 1 atlas atlas      1027 Mar 10 20:14 memory_monitor_summary.json
2026-03-10 21:18:03 (14036): Guest Log: -rw-------. 1 atlas atlas   1511578 Mar 10 20:15 agis_ddmendpoints.agis.ALL.json
2026-03-10 21:18:03 (14036): Guest Log: -rw-------. 1 atlas atlas    665480 Mar 10 20:15 log.48955010._017088.job.log.tgz.1
2026-03-10 21:18:03 (14036): Guest Log: -rw-------. 1 atlas atlas      6383 Mar 10 20:15 heartbeat.json
2026-03-10 21:18:03 (14036): Guest Log: -rw-------. 1 atlas atlas        95 Mar 10 20:15 pilot_heartbeat.json
2026-03-10 21:18:03 (14036): Guest Log: -rw-------. 1 atlas atlas      4873 Mar 10 20:15 pilotlog.txt
2026-03-10 21:18:03 (14036): Guest Log: -rw-------. 1 atlas atlas   4597959 Mar 10 20:15 log.48955010._017088.job.log.1
2026-03-10 21:18:03 (14036): Guest Log: -rw-------. 1 atlas atlas       357 Mar 10 20:15 output.list
2026-03-10 21:18:03 (14036): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 10 20:15 runtime_log
2026-03-10 21:18:03 (14036): Guest Log: -rw-------. 1 atlas atlas   5283840 Mar 10 20:15 result.tar.gz
2026-03-10 21:18:03 (14036): Guest Log: -rw-r--r--. 1 atlas atlas      9236 Mar 10 20:15 runtime_log.err
2026-03-10 21:18:03 (14036): Guest Log: -rw-------. 1 atlas atlas       659 Mar 10 20:15 BPSLDmC1lJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmtPZLDmge8WMm.diag
2026-03-10 21:18:03 (14036): Guest Log: Looking for outputfile HITS.48955010._017088.pool.root.1
2026-03-10 21:18:03 (14036): Guest Log: HITS file was successfully produced
2026-03-10 21:18:03 (14036): Guest Log: -rw-------. 1 atlas atlas 188341554 Mar 10 20:14 /home/atlas/RunAtlas/HITS.48955010._017088.pool.root.1
2026-03-10 21:18:05 (14036): Guest Log: Successfully finished the ATLAS job!
2026-03-10 21:18:05 (14036): Guest Log: Copying the results back to the shared directory!
2026-03-10 21:18:05 (14036): Guest Log:  *** Contents of shared directory: ***
2026-03-10 21:18:05 (14036): Guest Log: total 619012
2026-03-10 21:18:05 (14036): Guest Log: -rwxrwxrwx. 1 root root 439613024 Mar 10 10:55 ATLAS.root_0
2026-03-10 21:18:05 (14036): Guest Log: -rwxrwxrwx. 1 root root 188341554 Mar 10  2026 HITS.pool.root.1
2026-03-10 21:18:05 (14036): Guest Log: -rwxrwxrwx. 1 root root      9106 Mar 10 10:55 init_data.xml
2026-03-10 21:18:05 (14036): Guest Log: -rwxrwxrwx. 1 root root    597951 Mar  9 13:33 input.tar.gz
2026-03-10 21:18:05 (14036): Guest Log: -rwxrwxrwx. 1 root root   5283840 Mar 10  2026 result.tar.gz
2026-03-10 21:18:05 (14036): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  9 13:33 start_atlas.sh
2026-03-10 21:18:05 (14036): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-10 21:18:05 (14036): VM Completion File Detected.
2026-03-10 21:18:05 (14036): Powering off VM.
2026-03-10 21:18:06 (14036): Successfully stopped VM.
2026-03-10 21:18:06 (14036): Deregistering VM. (boinc_edfe6bef95740331, slot#0)
2026-03-10 21:18:06 (14036): Removing network bandwidth throttle group from VM.
2026-03-10 21:18:07 (14036): Removing VM from VirtualBox.
2026-03-10 21:18:12 (14036): called boinc_finish(0)

</stderr_txt>
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