Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:01:11 (333442): wrapper (7.7.26015): starting
17:01:11 (333442): wrapper: running run_atlas (--nthreads 8)
[2026-03-09 17:01:11] Arguments: --nthreads 8
[2026-03-09 17:01:11] Threads: 8
[2026-03-09 17:01:11] Checking for CVMFS
[2026-03-09 17:01:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 17:01:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 17:01:13] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 17:01:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 17:01:15] 2.13.3.0 9358 177188 351340 157089 3 349 26847893 32935937 19517 16776704 0 747318991 99.698 572501073 32854 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-09 17:01:15] CVMFS is ok
[2026-03-09 17:01:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 17:01:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 17:01:15] Further information can be found at the LHC@home message board.
[2026-03-09 17:01:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 17:01:15] Checking for apptainer binary...
[2026-03-09 17:01:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 17:01:15] Running /usr/bin/apptainer --version
[2026-03-09 17:01:15] apptainer version 1.4.5-2.el9
[2026-03-09 17:01:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 17:01:36] c-6-6.aglt2.org
[2026-03-09 17:01:36] apptainer works
[2026-03-09 17:01:36] Set ATHENA_PROC_NUMBER=8
[2026-03-09 17:01:36] Set ATHENA_CORE_NUMBER=8
[2026-03-09 17:01:37] Starting ATLAS job with PandaID=7040789383
[2026-03-09 17:01:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 01:14:57]  *** The last 200 lines of the pilot log: ***
[2026-03-10 01:14:57] 2026-03-10 05:14:05,890 | INFO     | fitting pss+swap vs Time
[2026-03-10 01:14:57] 2026-03-10 05:14:05,890 | INFO     | sum of square deviations: 34290450751.466698
[2026-03-10 01:14:57] 2026-03-10 05:14:05,897 | INFO     | sum of deviations: 88534721063.99997
[2026-03-10 01:14:57] 2026-03-10 05:14:05,897 | INFO     | mean x: 1773104974.6333334
[2026-03-10 01:14:57] 2026-03-10 05:14:05,897 | INFO     | mean y: 2530809.125
[2026-03-10 01:14:57] 2026-03-10 05:14:05,897 | INFO     | intersect: -4575459590.713602
[2026-03-10 01:14:57] 2026-03-10 05:14:05,898 | INFO     | chi2: 2.065120073790062
[2026-03-10 01:14:57] 2026-03-10 05:14:05,899 | INFO     | sum of square deviations: 33229685244.63169
[2026-03-10 01:14:57] 2026-03-10 05:14:05,921 | INFO     | sum of deviations: 88730361011.68428
[2026-03-10 01:14:57] 2026-03-10 05:14:05,923 | INFO     | mean x: 1773104822.1157894
[2026-03-10 01:14:57] 2026-03-10 05:14:05,923 | INFO     | mean y: 2530837.2421052633
[2026-03-10 01:14:57] 2026-03-10 05:14:05,924 | INFO     | intersect: -4732037962.301636
[2026-03-10 01:14:57] 2026-03-10 05:14:05,928 | INFO     | chi2: 2.065134458901656
[2026-03-10 01:14:57] 2026-03-10 05:14:05,928 | INFO     | current chi2=2.065134458901656 (change=-0.0006965750697249194 %)
[2026-03-10 01:14:57] 2026-03-10 05:14:05,931 | INFO     | right removable region: 474
[2026-03-10 01:14:57] 2026-03-10 05:14:05,936 | INFO     | sum of square deviations: 33229821055.549526
[2026-03-10 01:14:57] 2026-03-10 05:14:05,959 | INFO     | sum of deviations: -13552136549.953686
[2026-03-10 01:14:57] 2026-03-10 05:14:05,959 | INFO     | mean x: 1773105127.1410527
[2026-03-10 01:14:57] 2026-03-10 05:14:05,960 | INFO     | mean y: 2545444.387368421
[2026-03-10 01:14:57] 2026-03-10 05:14:05,960 | INFO     | intersect: 725671902.4043769
[2026-03-10 01:14:57] 2026-03-10 05:14:05,960 | INFO     | chi2: 0.10888628055304377
[2026-03-10 01:14:57] 2026-03-10 05:14:05,961 | INFO     | current chi2=0.10888628055304377 (change=94.72736322042488 %)
[2026-03-10 01:14:57] 2026-03-10 05:14:05,961 | INFO     | sum of square deviations: 32191343357.66175
[2026-03-10 01:14:57] 2026-03-10 05:14:05,967 | INFO     | sum of deviations: -25769035458.757446
[2026-03-10 01:14:57] 2026-03-10 05:14:05,968 | INFO     | mean x: 1773105279.6446807
[2026-03-10 01:14:57] 2026-03-10 05:14:05,968 | INFO     | mean y: 2547229.2170212767
[2026-03-10 01:14:57] 2026-03-10 05:14:05,968 | INFO     | intersect: 1421910575.307361
[2026-03-10 01:14:57] 2026-03-10 05:14:05,969 | INFO     | chi2: 0.06724147912240314
[2026-03-10 01:14:57] 2026-03-10 05:14:05,969 | INFO     | current chi2=0.06724147912240314 (change=38.24614195573834 %)
[2026-03-10 01:14:57] 2026-03-10 05:14:05,970 | INFO     | sum of square deviations: 31174668704.15915
[2026-03-10 01:14:57] 2026-03-10 05:14:05,975 | INFO     | sum of deviations: -31126872363.56129
[2026-03-10 01:14:57] 2026-03-10 05:14:05,976 | INFO     | mean x: 1773105432.1526883
[2026-03-10 01:14:57] 2026-03-10 05:14:05,976 | INFO     | mean y: 2548029.529032258
[2026-03-10 01:14:57] 2026-03-10 05:14:05,976 | INFO     | intersect: 1772934974.0546243
[2026-03-10 01:14:57] 2026-03-10 05:14:05,977 | INFO     | chi2: 0.040425415000957164
[2026-03-10 01:14:57] 2026-03-10 05:14:05,977 | INFO     | current chi2=0.040425415000957164 (change=39.88024129069396 %)
[2026-03-10 01:14:57] 2026-03-10 05:14:05,977 | INFO     | sum of square deviations: 30179565632.443474
[2026-03-10 01:14:57] 2026-03-10 05:14:05,983 | INFO     | sum of deviations: -28884242295.326073
[2026-03-10 01:14:57] 2026-03-10 05:14:05,983 | INFO     | mean x: 1773105584.6652174
[2026-03-10 01:14:57] 2026-03-10 05:14:05,983 | INFO     | mean y: 2547685.5108695654
[2026-03-10 01:14:57] 2026-03-10 05:14:05,983 | INFO     | intersect: 1699550616.1166456
[2026-03-10 01:14:57] 2026-03-10 05:14:05,984 | INFO     | chi2: 0.04017346181038864
[2026-03-10 01:14:57] 2026-03-10 05:14:05,984 | INFO     | current chi2=0.04017346181038864 (change=0.6232544318037548 %)
[2026-03-10 01:14:57] 2026-03-10 05:14:05,984 | INFO     | left removable region: 40
[2026-03-10 01:14:57] 2026-03-10 05:14:05,985 | INFO     | sum of square deviations: 25345546047.01376
[2026-03-10 01:14:57] 2026-03-10 05:14:05,990 | INFO     | sum of deviations: -13746135527.847927
[2026-03-10 01:14:57] 2026-03-10 05:14:05,991 | INFO     | mean x: 1773106011.6313365
[2026-03-10 01:14:57] 2026-03-10 05:14:05,991 | INFO     | mean y: 2545691.944700461
[2026-03-10 01:14:57] 2026-03-10 05:14:05,991 | INFO     | intersect: 964188242.3129514
[2026-03-10 01:14:57] 2026-03-10 05:14:05,992 | INFO     | chi2: 0.03537552496429753
[2026-03-10 01:14:57] 2026-03-10 05:14:05,992 | INFO     | current memory leak: -0.54 B/s (using 434 data points, chi2=0.04)
[2026-03-10 01:14:57] 2026-03-10 05:14:05,993 | INFO     | could have reported an average CPU frequency of 2600 MHz (20 samples)
[2026-03-10 01:14:57] 2026-03-10 05:14:05,994 | INFO     | ..............................
[2026-03-10 01:14:57] 2026-03-10 05:14:05,994 | INFO     | . Timing measurements:
[2026-03-10 01:14:57] 2026-03-10 05:14:05,994 | INFO     | . get job = 0 s
[2026-03-10 01:14:57] 2026-03-10 05:14:05,994 | INFO     | . initial setup = 58 s
[2026-03-10 01:14:57] 2026-03-10 05:14:05,994 | INFO     | . payload setup = 63 s
[2026-03-10 01:14:57] 2026-03-10 05:14:05,994 | INFO     | . stage-in = 1 s
[2026-03-10 01:14:57] 2026-03-10 05:14:05,994 | INFO     | . payload execution = 29311 s
[2026-03-10 01:14:57] 2026-03-10 05:14:05,994 | INFO     | . stage-out = 6 s
[2026-03-10 01:14:57] 2026-03-10 05:14:05,995 | INFO     | . log creation = 0 s
[2026-03-10 01:14:57] 2026-03-10 05:14:05,995 | INFO     | ..............................
[2026-03-10 01:14:57] 2026-03-10 05:14:06,507 | INFO     | 
[2026-03-10 01:14:57] 2026-03-10 05:14:06,507 | INFO     | job summary report
[2026-03-10 01:14:57] 2026-03-10 05:14:06,507 | INFO     | --------------------------------------------------
[2026-03-10 01:14:57] 2026-03-10 05:14:06,507 | INFO     | PanDA job id: 7040789383
[2026-03-10 01:14:57] 2026-03-10 05:14:06,507 | INFO     | task id: 48955006
[2026-03-10 01:14:57] 2026-03-10 05:14:06,507 | INFO     | errors: (none)
[2026-03-10 01:14:57] 2026-03-10 05:14:06,520 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 01:14:57] 2026-03-10 05:14:06,520 | INFO     | pilot state: finished 
[2026-03-10 01:14:57] 2026-03-10 05:14:06,520 | INFO     | transexitcode: 0
[2026-03-10 01:14:57] 2026-03-10 05:14:06,520 | INFO     | exeerrorcode: 0
[2026-03-10 01:14:57] 2026-03-10 05:14:06,520 | INFO     | exeerrordiag: 
[2026-03-10 01:14:57] 2026-03-10 05:14:06,520 | INFO     | exitcode: 0
[2026-03-10 01:14:57] 2026-03-10 05:14:06,520 | INFO     | exitmsg: OK
[2026-03-10 01:14:57] 2026-03-10 05:14:06,520 | INFO     | cpuconsumptiontime: 44320 s
[2026-03-10 01:14:57] 2026-03-10 05:14:06,521 | INFO     | nevents: 400
[2026-03-10 01:14:57] 2026-03-10 05:14:06,521 | INFO     | neventsw: 0
[2026-03-10 01:14:57] 2026-03-10 05:14:06,521 | INFO     | pid: 347694
[2026-03-10 01:14:57] 2026-03-10 05:14:06,521 | INFO     | pgrp: 347694
[2026-03-10 01:14:57] 2026-03-10 05:14:06,521 | INFO     | corecount: 8
[2026-03-10 01:14:57] 2026-03-10 05:14:06,521 | INFO     | event service: False
[2026-03-10 01:14:57] 2026-03-10 05:14:06,521 | INFO     | sizes: {0: 2279142, 2: 2279743, 3: 2279855, 5: 2279855, 7: 2279855, 9: 2280500, 20: 2280500, 29378: 2317474, 29386: 2326472, 29388: 2326528, 29389: 2326722}
[2026-03-10 01:14:57] 2026-03-10 05:14:06,521 | INFO     | --------------------------------------------------
[2026-03-10 01:14:57] 2026-03-10 05:14:06,521 | INFO     | 
[2026-03-10 01:14:57] 2026-03-10 05:14:06,522 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-10 01:14:57] 2026-03-10 05:14:06,668 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 01:14:57] 2026-03-10 05:14:06,669 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 01:14:57] 2026-03-10 05:14:06,669 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 01:14:57] 2026-03-10 05:14:06,669 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 01:14:57] 2026-03-10 05:14:06,669 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 01:14:57] 2026-03-10 05:14:06,670 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 01:14:57] 2026-03-10 05:14:06,670 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 01:14:57] 2026-03-10 05:14:06,670 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 01:14:57] 2026-03-10 05:14:06,670 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 01:14:57] 2026-03-10 05:14:06,670 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 01:14:57] 2026-03-10 05:14:06,670 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 01:14:57] 2026-03-10 05:14:06,671 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 01:14:57] 2026-03-10 05:14:06,671 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 01:14:57] 2026-03-10 05:14:06,671 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 01:14:57] 2026-03-10 05:14:06,671 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 01:14:57] 2026-03-10 05:14:06,671 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 01:14:57] 2026-03-10 05:14:06,672 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 01:14:57] 2026-03-10 05:14:06,672 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 01:14:57] 2026-03-10 05:14:06,672 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 01:14:57] 2026-03-10 05:14:06,672 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 01:14:57] 2026-03-10 05:14:06,672 | INFO     | job 7040789383 has completed (purged errors)
[2026-03-10 01:14:57] 2026-03-10 05:14:06,672 | INFO     | overall cleanup function is called
[2026-03-10 01:14:57] 2026-03-10 05:14:07,694 | INFO     | --- collectZombieJob: --- 10, [347694]
[2026-03-10 01:14:57] 2026-03-10 05:14:07,695 | INFO     | zombie collector waiting for pid 347694
[2026-03-10 01:14:57] 2026-03-10 05:14:07,695 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 01:14:57] 2026-03-10 05:14:07,696 | INFO     | collected zombie processes
[2026-03-10 01:14:57] 2026-03-10 05:14:07,696 | INFO     | will attempt to kill all subprocesses of pid=347694
[2026-03-10 01:14:57] 2026-03-10 05:14:08,899 | INFO     | PID=339085 has CPU usage=14.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 01:14:57] 2026-03-10 05:14:08,900 | INFO     | .. there are 31 such processes running
[2026-03-10 01:14:57] 2026-03-10 05:14:09,016 | INFO     | process IDs to be killed: [347694] (in reverse order)
[2026-03-10 01:14:57] 2026-03-10 05:14:09,147 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 01:14:57] 2026-03-10 05:14:09,147 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 01:14:57] 2026-03-10 05:14:09,165 | INFO     | did not find any defunct processes belonging to 347694
[2026-03-10 01:14:57] 2026-03-10 05:14:09,182 | INFO     | did not find any defunct processes belonging to 347694
[2026-03-10 01:14:57] 2026-03-10 05:14:09,182 | INFO     | ready for new job
[2026-03-10 01:14:57] 2026-03-10 05:14:09,182 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 01:14:57] 2026-03-10 05:14:09,195 | INFO     | **************************************
[2026-03-10 01:14:57] 2026-03-10 05:14:09,195 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 01:14:57] 2026-03-10 05:14:09,195 | INFO     | **************************************
[2026-03-10 01:14:57] 2026-03-10 05:14:09,195 | INFO     | 
[2026-03-10 01:14:57] 2026-03-10 05:14:09,197 | INFO     | architecture information:
[2026-03-10 01:14:57] 2026-03-10 05:14:09,197 | INFO     | executing command: cat /etc/os-release
[2026-03-10 01:14:57] 2026-03-10 05:14:09,222 | INFO     | cat /etc/os-release:
[2026-03-10 01:14:57] NAME="CentOS Linux"
[2026-03-10 01:14:57] VERSION="7 (Core)"
[2026-03-10 01:14:57] ID="centos"
[2026-03-10 01:14:57] ID_LIKE="rhel fedora"
[2026-03-10 01:14:57] VERSION_ID="7"
[2026-03-10 01:14:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 01:14:57] ANSI_COLOR="0;31"
[2026-03-10 01:14:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 01:14:57] HOME_URL="https://www.centos.org/"
[2026-03-10 01:14:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 01:14:57] 
[2026-03-10 01:14:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 01:14:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 01:14:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 01:14:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 01:14:57] 
[2026-03-10 01:14:57] 2026-03-10 05:14:09,223 | INFO     | **************************************
[2026-03-10 01:14:57] 2026-03-10 05:14:09,732 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-10 01:14:57] 2026-03-10 05:14:09,766 | INFO     | sufficient remaining disk space (73706504192 B)
[2026-03-10 01:14:57] 2026-03-10 05:14:09,766 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 01:14:57] 2026-03-10 05:14:09,767 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 01:14:57] 2026-03-10 05:14:09,767 | INFO     | update_server=False
[2026-03-10 01:14:57] 2026-03-10 05:14:09,767 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 01:14:57] 2026-03-10 05:14:09,768 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 01:14:57] 2026-03-10 05:14:09,768 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-10 01:14:57] 2026-03-10 05:14:09,768 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 01:14:57] 2026-03-10 05:14:09,768 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 01:14:57] 2026-03-10 05:14:09,769 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 01:14:57] 2026-03-10 05:14:10,222 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-10 01:14:57] 2026-03-10 05:14:10,222 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-10 01:14:57] 2026-03-10 05:14:10,222 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 01:14:57] 2026-03-10 05:14:10,222 | INFO     | will abort loop
[2026-03-10 01:14:57] 2026-03-10 05:14:10,550 | INFO     | all data control threads have been joined
[2026-03-10 01:14:57] 2026-03-10 05:14:10,553 | INFO     | all payload control threads have been joined
[2026-03-10 01:14:57] 2026-03-10 05:14:10,777 | INFO     | [job] retrieve thread has finished
[2026-03-10 01:14:57] 2026-03-10 05:14:11,132 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 01:14:57] 2026-03-10 05:14:11,228 | INFO     | [job] job monitor thread has finished
[2026-03-10 01:14:57] 2026-03-10 05:14:11,285 | INFO     | all job control threads have been joined
[2026-03-10 01:14:57] 2026-03-10 05:14:11,342 | INFO     | [payload] failed_post thread has finished
[2026-03-10 01:14:57] 2026-03-10 05:14:11,361 | INFO     | [payload] validate_post thread has finished
[2026-03-10 01:14:57] 2026-03-10 05:14:11,556 | INFO     | [data] control thread has finished
[2026-03-10 01:14:57] 2026-03-10 05:14:11,560 | INFO     | [payload] control thread has finished
[2026-03-10 01:14:57] 2026-03-10 05:14:11,570 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 01:14:57] 2026-03-10 05:14:11,570 | INFO     | [data] copytool_in thread has finished
[2026-03-10 01:14:57] 2026-03-10 05:14:11,571 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 01:14:57] 2026-03-10 05:14:11,571 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 01:14:57] 2026-03-10 05:14:11,694 | INFO     | [job] validate thread has finished
[2026-03-10 01:14:57] 2026-03-10 05:14:11,699 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 01:14:57] 2026-03-10 05:14:11,705 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 01:14:57] 2026-03-10 05:14:11,777 | INFO     | [data] copytool_out thread has finished
[2026-03-10 01:14:57] 2026-03-10 05:14:12,139 | INFO     | [job] queue monitor thread has finished
[2026-03-10 01:14:57] 2026-03-10 05:14:12,292 | INFO     | [job] control thread has finished
[2026-03-10 01:14:57] 2026-03-10 05:14:15,713 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 01:14:57] 2026-03-10 05:14:50,938 | INFO     | [monitor] cgroup control has ended
[2026-03-10 01:14:57] 2026-03-10 05:14:51,536 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140507174827840)>', '<ExcThread(monitor, started 140506231207680)>']
[2026-03-10 01:14:57] 2026-03-10 05:14:52,146 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 01:14:57] 2026-03-10 05:14:52,146 | INFO     | [monitor] control thread has ended
[2026-03-10 01:14:57] 2026-03-10 05:14:56,564 | INFO     | all workflow threads have been joined
[2026-03-10 01:14:57] 2026-03-10 05:14:56,564 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 01:14:57] 2026-03-10 05:14:56,565 | INFO     | traces error code: 0
[2026-03-10 01:14:57] 2026-03-10 05:14:56,565 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 01:14:57] 2026-03-10 05:14:57,460 [wrapper] ==== pilot stdout END ====
[2026-03-10 01:14:57] 2026-03-10 05:14:57,463 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 01:14:57] 2026-03-10 05:14:57,465 [wrapper] pilotpid: 339085
[2026-03-10 01:14:57] 2026-03-10 05:14:57,468 [wrapper] Pilot exit status: 0
[2026-03-10 01:14:57] 2026-03-10 05:14:57,484 [wrapper] pandaids: 7040789383
[2026-03-10 01:14:57] 2026-03-10 05:14:57,562 [wrapper] cleanup supervisor_pilot 1495329 339086
[2026-03-10 01:14:57] 2026-03-10 05:14:57,565 [wrapper] Test setup, not cleaning
[2026-03-10 01:14:57] 2026-03-10 05:14:57,568 [wrapper] apfmon messages muted
[2026-03-10 01:14:57] 2026-03-10 05:14:57,571 [wrapper] ==== wrapper stdout END ====
[2026-03-10 01:14:57] 2026-03-10 05:14:57,573 [wrapper] ==== wrapper stderr END ====
[2026-03-10 01:14:57]  *** Error codes and diagnostics ***
[2026-03-10 01:14:57]     "exeErrorCode": 0,
[2026-03-10 01:14:57]     "exeErrorDiag": "",
[2026-03-10 01:14:57]     "pilotErrorCode": 0,
[2026-03-10 01:14:57]     "pilotErrorDiag": "",
[2026-03-10 01:14:57]  *** Listing of results directory ***
[2026-03-10 01:14:57] total 619200
[2026-03-10 01:14:57] -rw-r--r--. 1 boincer umatlas      5111 Mar  9 05:23 queuedata.json
[2026-03-10 01:14:57] -rw-r--r--. 1 boincer umatlas    584627 Mar  9 05:23 pilot3.tar.gz
[2026-03-10 01:14:57] -rwx------. 1 boincer umatlas     36322 Mar  9 05:23 runpilot2-wrapper.sh
[2026-03-10 01:14:57] -rw-r--r--. 1 boincer umatlas       100 Mar  9 17:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 01:14:57] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  9 17:01 run_atlas
[2026-03-10 01:14:57] -rw-r--r--. 1 boincer umatlas       105 Mar  9 17:01 job.xml
[2026-03-10 01:14:57] -rw-r--r--. 2 boincer umatlas 436718431 Mar  9 17:01 EVNT.46701403._000693.pool.root.1
[2026-03-10 01:14:57] -rw-r--r--. 2 boincer umatlas    597957 Mar  9 17:01 input.tar.gz
[2026-03-10 01:14:57] -rw-r--r--. 2 boincer umatlas     15845 Mar  9 17:01 start_atlas.sh
[2026-03-10 01:14:57] drwxrwx--x. 2 boincer umatlas      4096 Mar  9 17:01 shared
[2026-03-10 01:14:57] -rw-r--r--. 1 boincer umatlas         0 Mar  9 17:01 boinc_lockfile
[2026-03-10 01:14:57] -rw-r--r--. 1 boincer umatlas      2565 Mar  9 17:01 pandaJob.out
[2026-03-10 01:14:57] -rw-------. 1 boincer umatlas        57 Mar  9 17:01 setup.sh.local
[2026-03-10 01:14:57] -rw-------. 1 boincer umatlas   1002738 Mar  9 17:02 agis_schedconf.cvmfs.json
[2026-03-10 01:14:57] -rw-------. 1 boincer umatlas       439 Mar  9 17:03 workernode_map.json
[2026-03-10 01:14:57] drwx------. 5 boincer umatlas      4096 Mar  9 17:03 pilot3
[2026-03-10 01:14:57] -rw-r--r--. 1 boincer umatlas      6658 Mar 10 01:10 init_data.xml
[2026-03-10 01:14:57] -rw-r--r--. 1 boincer umatlas       532 Mar 10 01:13 boinc_task_state.xml
[2026-03-10 01:14:57] -rw-------. 1 boincer umatlas 185598261 Mar 10 01:13 HITS.48955006._034659.pool.root.1
[2026-03-10 01:14:57] -rw-------. 1 boincer umatlas      1040 Mar 10 01:13 memory_monitor_summary.json
[2026-03-10 01:14:57] -rw-------. 1 boincer umatlas   1511578 Mar 10 01:13 agis_ddmendpoints.agis.ALL.json
[2026-03-10 01:14:57] -rw-------. 1 boincer umatlas    644812 Mar 10 01:14 log.48955006._034659.job.log.tgz.1
[2026-03-10 01:14:57] -rw-------. 1 boincer umatlas      6381 Mar 10 01:14 heartbeat.json
[2026-03-10 01:14:57] -rw-------. 1 boincer umatlas        95 Mar 10 01:14 pilot_heartbeat.json
[2026-03-10 01:14:57] -rw-r--r--. 1 boincer umatlas      8192 Mar 10 01:14 boinc_mmap_file
[2026-03-10 01:14:57] -rw-r--r--. 1 boincer umatlas        28 Mar 10 01:14 wrapper_checkpoint.txt
[2026-03-10 01:14:57] -rw-------. 1 boincer umatlas      4734 Mar 10 01:14 pilotlog.txt
[2026-03-10 01:14:57] -rw-------. 1 boincer umatlas   3256492 Mar 10 01:14 log.48955006._034659.job.log.1
[2026-03-10 01:14:57] -rw-------. 1 boincer umatlas       357 Mar 10 01:14 output.list
[2026-03-10 01:14:57] -rw-r--r--. 1 boincer umatlas       620 Mar 10 01:14 runtime_log
[2026-03-10 01:14:57] -rw-------. 1 boincer umatlas   3921920 Mar 10 01:14 result.tar.gz
[2026-03-10 01:14:57] -rw-r--r--. 1 boincer umatlas      9327 Mar 10 01:14 runtime_log.err
[2026-03-10 01:14:57] -rw-------. 1 boincer umatlas       654 Mar 10 01:14 KOwNDmB1lJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmoOZLDmhylAdm.diag
[2026-03-10 01:14:57] -rw-r--r--. 1 boincer umatlas     21109 Mar 10 01:14 stderr.txt
[2026-03-10 01:14:57] HITS file was successfully produced:
[2026-03-10 01:14:57] -rw-------. 1 boincer umatlas 185598261 Mar 10 01:13 shared/HITS.pool.root.1
[2026-03-10 01:14:57]  *** Contents of shared directory: ***
[2026-03-10 01:14:57] total 612172
[2026-03-10 01:14:57] -rw-r--r--. 2 boincer umatlas 436718431 Mar  9 17:01 ATLAS.root_0
[2026-03-10 01:14:57] -rw-r--r--. 2 boincer umatlas    597957 Mar  9 17:01 input.tar.gz
[2026-03-10 01:14:57] -rw-r--r--. 2 boincer umatlas     15845 Mar  9 17:01 start_atlas.sh
[2026-03-10 01:14:57] -rw-------. 1 boincer umatlas 185598261 Mar 10 01:13 HITS.pool.root.1
[2026-03-10 01:14:57] -rw-------. 1 boincer umatlas   3921920 Mar 10 01:14 result.tar.gz
01:14:59 (333442): run_atlas exited; CPU time 45461.955820
01:14:59 (333442): called boinc_finish(0)

</stderr_txt>
]]>

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