Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
06:34:22 (342514): wrapper (7.7.26015): starting
06:34:22 (342514): wrapper: running run_atlas (--nthreads 12)
[2026-03-13 06:34:22] Arguments: --nthreads 12
[2026-03-13 06:34:22] Threads: 12
[2026-03-13 06:34:22] Checking for CVMFS
[2026-03-13 06:34:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 06:34:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 06:34:22] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 06:34:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 06:34:23] 2.13.3.0 4052807 14454 73968 157230 2 188 3861377 4096000 17319 130560 0 97541334 99.999 543207 3603 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-03-13 06:34:23] CVMFS is ok
[2026-03-13 06:34:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 06:34:23] Checking for apptainer binary...
[2026-03-13 06:34:23] apptainer is not installed, using version from CVMFS
[2026-03-13 06:34:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 06:34:24] epyc7v12
[2026-03-13 06:34:24] apptainer works
[2026-03-13 06:34:25] Set ATHENA_PROC_NUMBER=12
[2026-03-13 06:34:25] Set ATHENA_CORE_NUMBER=12
[2026-03-13 06:34:25] Starting ATLAS job with PandaID=7034261238
[2026-03-13 06:34:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31430/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 08:17:24]  *** The last 200 lines of the pilot log: ***
[2026-03-13 08:17:24] 2026-03-13 08:16:33,861 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-13 08:17:24] 2026-03-13 08:16:33,861 | INFO     | log transfer has been attempted: DONE
[2026-03-13 08:17:24] 2026-03-13 08:16:33,861 | INFO     | job 7034261238 has finished - writing final server update
[2026-03-13 08:17:24] 2026-03-13 08:16:33,861 | INFO     | total number of processed events: 400 (read)
[2026-03-13 08:17:24] 2026-03-13 08:16:33,888 | INFO     | using path: /opt/boinc/instance_homes/boinc_31430/slots/0/PanDA_Pilot-7034261238/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 08:17:24] 2026-03-13 08:16:33,889 | INFO     | extracted standard info from prmon json
[2026-03-13 08:17:24] 2026-03-13 08:16:33,889 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 08:17:24] 2026-03-13 08:16:33,889 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 08:17:24] 2026-03-13 08:16:33,889 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 08:17:24] 2026-03-13 08:16:33,889 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 08:17:24] 2026-03-13 08:16:33,892 | INFO     | fitting pss+swap vs Time
[2026-03-13 08:17:24] 2026-03-13 08:16:33,892 | INFO     | sum of square deviations: 310052325.0
[2026-03-13 08:17:24] 2026-03-13 08:16:33,892 | INFO     | sum of deviations: 15393085564.999998
[2026-03-13 08:17:24] 2026-03-13 08:16:33,893 | INFO     | mean x: 1773386755.5
[2026-03-13 08:17:24] 2026-03-13 08:16:33,893 | INFO     | mean y: 2547148.66
[2026-03-13 08:17:24] 2026-03-13 08:16:33,893 | INFO     | intersect: -88040314865.83781
[2026-03-13 08:17:24] 2026-03-13 08:16:33,893 | INFO     | chi2: 2.64389265242465
[2026-03-13 08:17:24] 2026-03-13 08:16:33,893 | INFO     | sum of square deviations: 265828240.0
[2026-03-13 08:17:24] 2026-03-13 08:16:33,894 | INFO     | sum of deviations: 21576079846.999996
[2026-03-13 08:17:24] 2026-03-13 08:16:33,894 | INFO     | mean x: 1773386603.0
[2026-03-13 08:17:24] 2026-03-13 08:16:33,894 | INFO     | mean y: 2567457.1263157893
[2026-03-13 08:17:24] 2026-03-13 08:16:33,894 | INFO     | intersect: -143935228414.10272
[2026-03-13 08:17:24] 2026-03-13 08:16:33,895 | INFO     | chi2: 1.8014668020448708
[2026-03-13 08:17:24] 2026-03-13 08:16:33,895 | INFO     | current chi2=1.8014668020448708 (change=31.863088299262486 %)
[2026-03-13 08:17:24] 2026-03-13 08:16:33,895 | INFO     | sum of square deviations: 226022842.5
[2026-03-13 08:17:24] 2026-03-13 08:16:33,896 | INFO     | sum of deviations: 20370251001.0
[2026-03-13 08:17:24] 2026-03-13 08:16:33,896 | INFO     | mean x: 1773386450.5
[2026-03-13 08:17:24] 2026-03-13 08:16:33,896 | INFO     | mean y: 2562833.0
[2026-03-13 08:17:24] 2026-03-13 08:16:33,896 | INFO     | intersect: -159823438463.56125
[2026-03-13 08:17:24] 2026-03-13 08:16:33,896 | INFO     | chi2: 1.8006478138880448
[2026-03-13 08:17:24] 2026-03-13 08:16:33,896 | INFO     | current chi2=1.8006478138880448 (change=0.04546229527495377 %)
[2026-03-13 08:17:24] 2026-03-13 08:16:33,896 | INFO     | right removable region: 89
[2026-03-13 08:17:24] 2026-03-13 08:16:33,897 | INFO     | sum of square deviations: 265828240.0
[2026-03-13 08:17:24] 2026-03-13 08:16:33,897 | INFO     | sum of deviations: -3628910984.0
[2026-03-13 08:17:24] 2026-03-13 08:16:33,897 | INFO     | mean x: 1773386908.0
[2026-03-13 08:17:24] 2026-03-13 08:16:33,897 | INFO     | mean y: 2611721.010526316
[2026-03-13 08:17:24] 2026-03-13 08:16:33,898 | INFO     | intersect: 24211714671.558582
[2026-03-13 08:17:24] 2026-03-13 08:16:33,898 | INFO     | chi2: 0.9776202244399227
[2026-03-13 08:17:24] 2026-03-13 08:16:33,898 | INFO     | current chi2=0.9776202244399227 (change=63.023452425597895 %)
[2026-03-13 08:17:24] 2026-03-13 08:16:33,898 | INFO     | sum of square deviations: 226022842.5
[2026-03-13 08:17:24] 2026-03-13 08:16:33,899 | INFO     | sum of deviations: -8056489020.5
[2026-03-13 08:17:24] 2026-03-13 08:16:33,899 | INFO     | mean x: 1773387060.5
[2026-03-13 08:17:24] 2026-03-13 08:16:33,899 | INFO     | mean y: 2628536.4555555554
[2026-03-13 08:17:24] 2026-03-13 08:16:33,899 | INFO     | intersect: 63214263360.555336
[2026-03-13 08:17:24] 2026-03-13 08:16:33,899 | INFO     | chi2: 0.8875239331462074
[2026-03-13 08:17:24] 2026-03-13 08:16:33,899 | INFO     | current chi2=0.8875239331462074 (change=9.215878420000093 %)
[2026-03-13 08:17:24] 2026-03-13 08:16:33,899 | INFO     | left removable region: 20
[2026-03-13 08:17:24] 2026-03-13 08:16:33,900 | INFO     | sum of square deviations: 101843770.0
[2026-03-13 08:17:24] 2026-03-13 08:16:33,900 | INFO     | sum of deviations: -479676306.00000036
[2026-03-13 08:17:24] 2026-03-13 08:16:33,900 | INFO     | mean x: 1773387030.0
[2026-03-13 08:17:24] 2026-03-13 08:16:33,900 | INFO     | mean y: 2651610.188405797
[2026-03-13 08:17:24] 2026-03-13 08:16:33,900 | INFO     | intersect: 8355167818.67825
[2026-03-13 08:17:24] 2026-03-13 08:16:33,900 | INFO     | chi2: 0.002840675855953941
[2026-03-13 08:17:24] 2026-03-13 08:16:33,901 | INFO     | current memory leak: -4.71 B/s (using 69 data points, chi2=0.00)
[2026-03-13 08:17:24] 2026-03-13 08:16:33,901 | INFO     | could have reported an average CPU frequency of 2387 MHz (7 samples)
[2026-03-13 08:17:24] 2026-03-13 08:16:33,901 | INFO     | ..............................
[2026-03-13 08:17:24] 2026-03-13 08:16:33,901 | INFO     | . Timing measurements:
[2026-03-13 08:17:24] 2026-03-13 08:16:33,901 | INFO     | . get job = 0 s
[2026-03-13 08:17:24] 2026-03-13 08:16:33,901 | INFO     | . initial setup = 15 s
[2026-03-13 08:17:24] 2026-03-13 08:16:33,902 | INFO     | . payload setup = 14 s
[2026-03-13 08:17:24] 2026-03-13 08:16:33,902 | INFO     | . stage-in = 0 s
[2026-03-13 08:17:24] 2026-03-13 08:16:33,902 | INFO     | . payload execution = 6059 s
[2026-03-13 08:17:24] 2026-03-13 08:16:33,902 | INFO     | . stage-out = 1 s
[2026-03-13 08:17:24] 2026-03-13 08:16:33,902 | INFO     | . log creation = 0 s
[2026-03-13 08:17:24] 2026-03-13 08:16:33,902 | INFO     | ..............................
[2026-03-13 08:17:24] 2026-03-13 08:16:34,016 | INFO     | 
[2026-03-13 08:17:24] 2026-03-13 08:16:34,016 | INFO     | job summary report
[2026-03-13 08:17:24] 2026-03-13 08:16:34,016 | INFO     | --------------------------------------------------
[2026-03-13 08:17:24] 2026-03-13 08:16:34,016 | INFO     | PanDA job id: 7034261238
[2026-03-13 08:17:24] 2026-03-13 08:16:34,016 | INFO     | task id: 48700938
[2026-03-13 08:17:24] 2026-03-13 08:16:34,016 | INFO     | errors: (none)
[2026-03-13 08:17:24] 2026-03-13 08:16:34,017 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 08:17:24] 2026-03-13 08:16:34,017 | INFO     | pilot state: finished 
[2026-03-13 08:17:24] 2026-03-13 08:16:34,017 | INFO     | transexitcode: 0
[2026-03-13 08:17:24] 2026-03-13 08:16:34,017 | INFO     | exeerrorcode: 0
[2026-03-13 08:17:24] 2026-03-13 08:16:34,017 | INFO     | exeerrordiag: 
[2026-03-13 08:17:24] 2026-03-13 08:16:34,017 | INFO     | exitcode: 0
[2026-03-13 08:17:24] 2026-03-13 08:16:34,017 | INFO     | exitmsg: OK
[2026-03-13 08:17:24] 2026-03-13 08:16:34,017 | INFO     | cpuconsumptiontime: 37719 s
[2026-03-13 08:17:24] 2026-03-13 08:16:34,017 | INFO     | nevents: 400
[2026-03-13 08:17:24] 2026-03-13 08:16:34,017 | INFO     | neventsw: 0
[2026-03-13 08:17:24] 2026-03-13 08:16:34,017 | INFO     | pid: 351841
[2026-03-13 08:17:24] 2026-03-13 08:16:34,017 | INFO     | pgrp: 351841
[2026-03-13 08:17:24] 2026-03-13 08:16:34,017 | INFO     | corecount: 12
[2026-03-13 08:17:24] 2026-03-13 08:16:34,017 | INFO     | event service: False
[2026-03-13 08:17:24] 2026-03-13 08:16:34,017 | INFO     | sizes: {0: 2279741, 1: 2280202, 2: 2280202, 6077: 2307394, 6078: 2307393, 6080: 2316493, 6083: 2316705, 6085: 2316899}
[2026-03-13 08:17:24] 2026-03-13 08:16:34,017 | INFO     | --------------------------------------------------
[2026-03-13 08:17:24] 2026-03-13 08:16:34,018 | INFO     | 
[2026-03-13 08:17:24] 2026-03-13 08:16:34,018 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31430/slots/0
[2026-03-13 08:17:24] 2026-03-13 08:16:34,053 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 08:17:24] 2026-03-13 08:16:34,053 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 08:17:24] 2026-03-13 08:16:34,053 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 08:17:24] 2026-03-13 08:16:34,053 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 08:17:24] 2026-03-13 08:16:34,053 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 08:17:24] 2026-03-13 08:16:34,053 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 08:17:24] 2026-03-13 08:16:34,053 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 08:17:24] 2026-03-13 08:16:34,054 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 08:17:24] 2026-03-13 08:16:34,054 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 08:17:24] 2026-03-13 08:16:34,054 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 08:17:24] 2026-03-13 08:16:34,054 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 08:17:24] 2026-03-13 08:16:34,054 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 08:17:24] 2026-03-13 08:16:34,054 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 08:17:24] 2026-03-13 08:16:34,054 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 08:17:24] 2026-03-13 08:16:34,054 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 08:17:24] 2026-03-13 08:16:34,054 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 08:17:24] 2026-03-13 08:16:34,054 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 08:17:24] 2026-03-13 08:16:34,055 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 08:17:24] 2026-03-13 08:16:34,055 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 08:17:24] 2026-03-13 08:16:34,055 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 08:17:24] 2026-03-13 08:16:34,055 | INFO     | job 7034261238 has completed (purged errors)
[2026-03-13 08:17:24] 2026-03-13 08:16:34,055 | INFO     | overall cleanup function is called
[2026-03-13 08:17:24] 2026-03-13 08:16:35,064 | INFO     | --- collectZombieJob: --- 10, [351841]
[2026-03-13 08:17:24] 2026-03-13 08:16:35,064 | INFO     | zombie collector waiting for pid 351841
[2026-03-13 08:17:24] 2026-03-13 08:16:35,064 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 08:17:24] 2026-03-13 08:16:35,065 | INFO     | collected zombie processes
[2026-03-13 08:17:24] 2026-03-13 08:16:35,065 | INFO     | will attempt to kill all subprocesses of pid=351841
[2026-03-13 08:17:24] 2026-03-13 08:16:35,760 | INFO     | process IDs to be killed: [351841] (in reverse order)
[2026-03-13 08:17:24] 2026-03-13 08:16:36,183 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 08:17:24] 2026-03-13 08:16:36,183 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 08:17:24] 2026-03-13 08:16:36,205 | INFO     | did not find any defunct processes belonging to 351841
[2026-03-13 08:17:24] 2026-03-13 08:16:36,221 | INFO     | did not find any defunct processes belonging to 351841
[2026-03-13 08:17:24] 2026-03-13 08:16:36,222 | INFO     | ready for new job
[2026-03-13 08:17:24] 2026-03-13 08:16:36,222 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 08:17:24] 2026-03-13 08:16:36,224 | INFO     | **************************************
[2026-03-13 08:17:24] 2026-03-13 08:16:36,224 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-13 08:17:24] 2026-03-13 08:16:36,224 | INFO     | **************************************
[2026-03-13 08:17:24] 2026-03-13 08:16:36,224 | INFO     | 
[2026-03-13 08:17:24] 2026-03-13 08:16:36,234 | INFO     | architecture information:
[2026-03-13 08:17:24] 2026-03-13 08:16:36,235 | INFO     | executing command: cat /etc/os-release
[2026-03-13 08:17:24] 2026-03-13 08:16:36,280 | INFO     | cat /etc/os-release:
[2026-03-13 08:17:24] NAME="CentOS Linux"
[2026-03-13 08:17:24] VERSION="7 (Core)"
[2026-03-13 08:17:24] ID="centos"
[2026-03-13 08:17:24] ID_LIKE="rhel fedora"
[2026-03-13 08:17:24] VERSION_ID="7"
[2026-03-13 08:17:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 08:17:24] ANSI_COLOR="0;31"
[2026-03-13 08:17:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 08:17:24] HOME_URL="https://www.centos.org/"
[2026-03-13 08:17:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 08:17:24] 
[2026-03-13 08:17:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 08:17:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 08:17:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 08:17:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 08:17:24] 
[2026-03-13 08:17:24] 2026-03-13 08:16:36,281 | INFO     | **************************************
[2026-03-13 08:17:24] 2026-03-13 08:16:36,786 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31430/slots/0
[2026-03-13 08:17:24] 2026-03-13 08:16:36,831 | INFO     | sufficient remaining disk space (164503748608 B)
[2026-03-13 08:17:24] 2026-03-13 08:16:36,831 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 08:17:24] 2026-03-13 08:16:36,831 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 08:17:24] 2026-03-13 08:16:36,831 | INFO     | update_server=False
[2026-03-13 08:17:24] 2026-03-13 08:16:36,832 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 08:17:24] 2026-03-13 08:16:36,833 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 08:17:24] 2026-03-13 08:16:36,833 | INFO     | aborting loop
[2026-03-13 08:17:24] 2026-03-13 08:16:37,226 | INFO     | all job control threads have been joined
[2026-03-13 08:17:24] 2026-03-13 08:16:37,406 | INFO     | all data control threads have been joined
[2026-03-13 08:17:24] 2026-03-13 08:16:37,497 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 08:17:24] 2026-03-13 08:16:37,838 | INFO     | [job] job monitor thread has finished
[2026-03-13 08:17:24] 2026-03-13 08:16:37,839 | INFO     | [job] retrieve thread has finished
[2026-03-13 08:17:24] 2026-03-13 08:16:37,910 | INFO     | [data] copytool_in thread has finished
[2026-03-13 08:17:24] 2026-03-13 08:16:37,934 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 08:17:24] 2026-03-13 08:16:37,961 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 08:17:24] 2026-03-13 08:16:38,133 | INFO     | all payload control threads have been joined
[2026-03-13 08:17:24] 2026-03-13 08:16:38,212 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 08:17:24] 2026-03-13 08:16:38,231 | INFO     | [job] control thread has finished
[2026-03-13 08:17:24] 2026-03-13 08:16:38,374 | INFO     | [payload] failed_post thread has finished
[2026-03-13 08:17:24] 2026-03-13 08:16:38,411 | INFO     | [data] control thread has finished
[2026-03-13 08:17:24] 2026-03-13 08:16:38,667 | INFO     | [job] validate thread has finished
[2026-03-13 08:17:24] 2026-03-13 08:16:38,759 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 08:17:24] 2026-03-13 08:16:39,024 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 08:17:24] 2026-03-13 08:16:39,036 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 08:17:24] 2026-03-13 08:16:39,138 | INFO     | [payload] control thread has finished
[2026-03-13 08:17:24] 2026-03-13 08:16:39,277 | INFO     | [payload] validate_post thread has finished
[2026-03-13 08:17:24] 2026-03-13 08:16:39,502 | INFO     | [data] copytool_out thread has finished
[2026-03-13 08:17:24] 2026-03-13 08:16:40,029 | INFO     | [job] queue monitor thread has finished
[2026-03-13 08:17:24] 2026-03-13 08:16:42,217 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 08:17:24] 2026-03-13 08:17:08,064 | INFO     | PID=346864 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-13 08:17:24] 2026-03-13 08:17:08,065 | INFO     | .. there are 20 such processes running
[2026-03-13 08:17:24] 2026-03-13 08:17:08,065 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 08:17:24] 2026-03-13 08:17:08,065 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 08:17:24] 2026-03-13 08:17:08,065 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 08:17:24] 2026-03-13 08:17:16,485 | INFO     | [monitor] cgroup control has ended
[2026-03-13 08:17:24] 2026-03-13 08:17:18,363 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129552722278208)>', '<ExcThread(monitor, started 129552034551552)>']
[2026-03-13 08:17:24] 2026-03-13 08:17:19,126 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 08:17:24] 2026-03-13 08:17:19,126 | INFO     | [monitor] control thread has ended
[2026-03-13 08:17:24] 2026-03-13 08:17:23,388 | INFO     | all workflow threads have been joined
[2026-03-13 08:17:24] 2026-03-13 08:17:23,388 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 08:17:24] 2026-03-13 08:17:23,389 | INFO     | traces error code: 0
[2026-03-13 08:17:24] 2026-03-13 08:17:23,389 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 08:17:24] 2026-03-13 08:17:23,672 [wrapper] ==== pilot stdout END ====
[2026-03-13 08:17:24] 2026-03-13 08:17:23,680 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 08:17:24] 2026-03-13 08:17:23,688 [wrapper] pilotpid: 346864
[2026-03-13 08:17:24] 2026-03-13 08:17:23,697 [wrapper] Pilot exit status: 0
[2026-03-13 08:17:24] 2026-03-13 08:17:23,731 [wrapper] pandaids: 7034261238
[2026-03-13 08:17:24] 2026-03-13 08:17:23,912 [wrapper] cleanup supervisor_pilot  546435 346865
[2026-03-13 08:17:24] 2026-03-13 08:17:23,919 [wrapper] Test setup, not cleaning
[2026-03-13 08:17:24] 2026-03-13 08:17:23,927 [wrapper] apfmon messages muted
[2026-03-13 08:17:24] 2026-03-13 08:17:23,936 [wrapper] ==== wrapper stdout END ====
[2026-03-13 08:17:24] 2026-03-13 08:17:23,945 [wrapper] ==== wrapper stderr END ====
[2026-03-13 08:17:24]  *** Error codes and diagnostics ***
[2026-03-13 08:17:24]     "exeErrorCode": 0,
[2026-03-13 08:17:24]     "exeErrorDiag": "",
[2026-03-13 08:17:24]     "pilotErrorCode": 0,
[2026-03-13 08:17:24]     "pilotErrorDiag": "",
[2026-03-13 08:17:24]  *** Listing of results directory ***
[2026-03-13 08:17:24] total 343816
[2026-03-13 08:17:24] -rw-r--r-- 1 boinc boinc    584627 Mar  1 02:30 pilot3.tar.gz
[2026-03-13 08:17:24] -rwx------ 1 boinc boinc     36322 Mar  1 02:34 runpilot2-wrapper.sh
[2026-03-13 08:17:24] -rw-r--r-- 1 boinc boinc      5111 Mar  1 02:35 queuedata.json
[2026-03-13 08:17:24] -rw-rw-r-- 1 boinc boinc       100 Mar 13 06:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 08:17:24] -rwxr-xr-x 1 boinc boinc      7986 Mar 13 06:34 run_atlas
[2026-03-13 08:17:24] -rw-rw-r-- 1 boinc boinc       105 Mar 13 06:34 job.xml
[2026-03-13 08:17:24] -rw-r--r-- 2 boinc boinc 192324493 Mar 13 06:34 EVNT.48700936._000069.pool.root.1
[2026-03-13 08:17:24] drwxrwx--x 2 boinc boinc      4096 Mar 13 06:34 shared
[2026-03-13 08:17:24] -rw-r--r-- 2 boinc boinc    597932 Mar 13 06:34 input.tar.gz
[2026-03-13 08:17:24] -rw-r--r-- 2 boinc boinc     15845 Mar 13 06:34 start_atlas.sh
[2026-03-13 08:17:24] -rw-rw-r-- 1 boinc boinc      6555 Mar 13 06:34 init_data.xml
[2026-03-13 08:17:24] -rw-rw-r-- 1 boinc boinc         0 Mar 13 06:34 boinc_setup_complete
[2026-03-13 08:17:24] -rw-rw-r-- 1 boinc boinc         0 Mar 13 06:34 boinc_lockfile
[2026-03-13 08:17:24] -rw-rw-r-- 1 boinc boinc      2498 Mar 13 06:34 pandaJob.out
[2026-03-13 08:17:24] -rw------- 1 boinc boinc   1006522 Mar 13 06:34 agis_schedconf.cvmfs.json
[2026-03-13 08:17:24] -rw------- 1 boinc boinc   1511578 Mar 13 06:34 agis_ddmendpoints.agis.ALL.json
[2026-03-13 08:17:24] -rw------- 1 boinc boinc       420 Mar 13 06:35 workernode_map.json
[2026-03-13 08:17:24] drwx------ 5 boinc boinc      4096 Mar 13 06:35 pilot3
[2026-03-13 08:17:24] -rw------- 1 boinc boinc 153278129 Mar 13 08:15 HITS.48700938._001378.pool.root.1
[2026-03-13 08:17:24] -rw-rw-r-- 1 boinc boinc       529 Mar 13 08:15 boinc_task_state.xml
[2026-03-13 08:17:24] -rw------- 1 boinc boinc      1024 Mar 13 08:16 memory_monitor_summary.json
[2026-03-13 08:17:24] -rw------- 1 boinc boinc    393364 Mar 13 08:16 log.48700938._001378.job.log.tgz.1
[2026-03-13 08:17:24] -rw------- 1 boinc boinc      6270 Mar 13 08:16 heartbeat.json
[2026-03-13 08:17:24] -rw------- 1 boinc boinc        95 Mar 13 08:16 pilot_heartbeat.json
[2026-03-13 08:17:24] -rw-rw-r-- 1 boinc boinc      8192 Mar 13 08:17 boinc_mmap_file
[2026-03-13 08:17:24] -rw-rw-r-- 1 boinc boinc        27 Mar 13 08:17 wrapper_checkpoint.txt
[2026-03-13 08:17:24] -rw------- 1 boinc boinc      4843 Mar 13 08:17 pilotlog.txt
[2026-03-13 08:17:24] -rw------- 1 boinc boinc    867348 Mar 13 08:17 log.48700938._001378.job.log.1
[2026-03-13 08:17:24] -rw------- 1 boinc boinc       357 Mar 13 08:17 output.list
[2026-03-13 08:17:24] -rw-rw-r-- 1 boinc boinc       620 Mar 13 08:17 runtime_log
[2026-03-13 08:17:24] -rw------- 1 boinc boinc   1280000 Mar 13 08:17 result.tar.gz
[2026-03-13 08:17:24] -rw-rw-r-- 1 boinc boinc      9166 Mar 13 08:17 runtime_log.err
[2026-03-13 08:17:24] -rw------- 1 boinc boinc       651 Mar 13 08:17 cFKMDmMolG9n9Rq4apOajLDm4fhM0noT9bVooX4SDm8v6KDmIAzPRn.diag
[2026-03-13 08:17:24] -rw-rw-r-- 1 boinc boinc     20843 Mar 13 08:17 stderr.txt
[2026-03-13 08:17:24] HITS file was successfully produced:
[2026-03-13 08:17:24] -rw------- 1 boinc boinc 153278129 Mar 13 08:15 shared/HITS.pool.root.1
[2026-03-13 08:17:24]  *** Contents of shared directory: ***
[2026-03-13 08:17:24] total 339368
[2026-03-13 08:17:24] -rw-r--r-- 2 boinc boinc 192324493 Mar 13 06:34 ATLAS.root_0
[2026-03-13 08:17:24] -rw-r--r-- 2 boinc boinc    597932 Mar 13 06:34 input.tar.gz
[2026-03-13 08:17:24] -rw-r--r-- 2 boinc boinc     15845 Mar 13 06:34 start_atlas.sh
[2026-03-13 08:17:24] -rw------- 1 boinc boinc 153278129 Mar 13 08:15 HITS.pool.root.1
[2026-03-13 08:17:24] -rw------- 1 boinc boinc   1280000 Mar 13 08:17 result.tar.gz
08:17:25 (342514): run_atlas exited; CPU time 38078.111944
08:17:25 (342514): called boinc_finish(0)

</stderr_txt>
]]>

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